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Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
chr7 | genome | chr7:1302238..1305370 - |
Analyses
This mRNA is derived from or has results from the following analyses
Homology
BLAST of NO07G04620.2 vs.
Match: EWM26914.1 (cyclin b2 [Nannochloropsis gaditana]) HSP 1 Score: 80.1 bits (196), Expect = 2.400e-11 Identity = 44/78 (56.41%), Postives = 48/78 (61.54%), Query Frame = 0
Query: 466 PTPGFYHHWNLRAAEALHRPRPYISKQRHLNAKMRAILLDWVTDGIERGREGGKEGDALSFNSIVLLKSRLCLSPFLS 544
P GFY HWNLRAAE+L RPYISK RHLNAKMRAILLDWVTD +LSF L ++ L FLS
Sbjct: 354 PFKGFYFHWNLRAAESLQSLRPYISKLRHLNAKMRAILLDWVTD----------VHQSLSFAPATLYRTAQVLDQFLS 421
The following BLAST results are available for this feature:
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >NO07G04620.2 ID=NO07G04620.2|Name=NO07G04620.2|organism=Nannochloropsis oceanica|type=mRNA|length=3003bp ATGTACAGCATGACTAAAGATAGAGGGGGCGGAGGCGGGGGCGTGGGAGT CACGTCAAAGCGCAACACTCGCAGCTCCAGCAATCCAAGTGCCACTGCGG CAGGTGCTCATCAACATGCCGTCGGCCTCTCCAACACAAGGACCACCACA ACCACGACCACAAGAGGTATGACGCGGCAGCGTCAGCACCAGCACAAGGA GCATGTGCCGCCACAATTGCTAGTGCAGCCGCCCCTCTGGCAACATCCCA AAATCATCAACACGAGCAGCAGCACCAGCAGCAGCACTAGCACCAGCAGA AGCAGCAGCAGTAGTAGCAGTGGCGGTAATGGCGGCGGCAGTCATCCCCC CTCCCTCATCCTATTGCAGGCGCAATGCCTGCAAGTGGCCCTCCAAGGAA TTTCGCACACCGGTTCCCCCACTTCGTCCTCCGTCTCCCCTTTCCTCAGC GGACAGGAACGTGACGCTCTCCGCCGTCTTGCTGTCTACCTACTCAGCTT GACGGTGCCCAAAGAGGGCAGCAAGGATGGAGAGGAACAAGTAGAGCAAC AGCAGACGATTAAAGGTGGAGAGCCATCACTTATGGAGGTGGTGGTAGCG GATGGCGAGGAGGTGATGGGAGATGAAGCGCAGATGCCAGGCAACGTGGG CCCCAGGCGGCAGCCACTTCAGCACGCCCGAGCTCCCGAAAGACAGGAAG AGAAAGGAAGCGATTGCAGCATTACATATAGTGGCGATAGAGGCCGTAAC AGGAAGGGCAGAGTCAAGGGCAAGGAGCGGTTGCACGCACAGCCAGCATT ACAGCAAGCAGCCACTCTTTCGTTCGAGGCTGCCGCCTTCTCTTCTTCCT TCCCGTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCC TCCTCATCCTCCTCCTCTTCTTCCTCCTCATCCTCCTCTAGTGCCACACG CCTGAAGAGGCCAAGCATTCGCACCACTTCCACTCCTACTTCCGAAGGAT GGCTGATCGGCCCCTCCTTTTCCTCTTCGCCTGTCTCCCCTCCCCGCGCC TTGCGGCGTCCCCGCCTGACCAAAGGCAACCAGTCCTCGTGCTCTTTCGC CACAACAGTGTCCACCAAGCAAGAAAAAAAGGACGGACTGCAGGCTTTGC CCGAGTCGGTATGGCAGCACGCCTTGTCCTTCGTCCCAGCTAAGAACCTG TATGCCGTCATGCGCACCTCCAGGTCCTTCTTCACCATGACATCGCCCTT CGAAGGTATCGCCGCTACCACGGGCTTGCTTTCAATCACCCTCCCTTTCT CTTCTCTCTGTCCGCTCTTCCCCATAGCTGAAATTCCACCTCTTCCCGAG CCGTGGTTTGACGTTCACTATTTCCTATCCCCTCCGTCCCTCCGCCCCAC CCCAGGTTTTTACCACCACTGGAATCTTCGCGCCGCGGAGGCGCTCCACC GTCCTAGACCCTACATCAGCAAGCAAAGACACTTGAATGCCAAAATGCGA GCTATTCTATTGGACTGGGTCACAGACGGTATAGAGAGAGGGAGGGAAGG AGGGAAGGAGGGTGATGCGCTTTCCTTCAACTCGATTGTTTTACTCAAGT CACGTTTATGTCTCTCGCCCTTTCTCTCCCTCGCTGCCTCCTAGTGCATC AGTCCCTGTCCTTCCTGCCGGCCACTTTGCACAGGACCGCGTACGTGCTT GATCATTTCTTGAGCCGCACCGACAATGTGACGCGGGAGAAGCTGCAGCT GGTGGGTGTCACGGCCTTCATGATAGCGGCGAAAGGGATCGAGGCATCTC CGCCCGAGCACGACGACTGCGCGTACTGGACCGACAACGCCTACAGCGGG GAGGAGGTTAGCCAGATGGAGATTCGGATGCTCAAGGCTCTGCCTCCGTC CGCTCGCCCGCCCTCCCTCCCTCCCACCGCCCTGGACTTCTTGTCACTGT ACCTGAAGGAGGCAAGCGCGGGCAAGCTCTCCGCCTGCCGCGCCCAATAC TACTGCGAGCGCACCCTCCAAGAACACGACATGCTCTCCTTCGCTCCCTC CCTCATCGCCGCCACCTCCATCCTTCTGGCCCTCAAGACGAACTCCAACC CTGGCCTGCCCTTTGCGTCCCTCCGTTCCTCCGCCCCGCCCTCCCCCTCT TCATACTGGCCGGCATCCCTGTCGCGCTACTCAGGCTACACAGAAGAGGA GATGGCGGCGTGTGCGCGGCGGGTGTGTGAGCACGTCAAGACCACGGTGA CTACCCTTTCGGGCCGCAAGCTCGATGCTGTCAAGAGAAAGTTCGCGGGG GGCGTGTTCCTGGCAGCCAGCAAAATGGAACCTCCTGCCTATGGAGAGGG GGATGGAGGCGGAGGCGGAGGTGGAGGAGGAGGAGGAGGAGGAGGAGGAG AAGGAGGAGGAGGAGGGGGAGAAAATATGCCTGTGGTTGGAGGGGAGGAC ATAGCGGTGATGGGGGGAGGGGTAGTGATGGGAGGAGGAGAAGCAGCAGG AGGAGGAGGAGGAGCAGGAGGAGGAGCGGTGGCAGCAGCAGCAGCAGCAG CAGCAGCGGTAGGAGGAGCAGGTGTGGTGGCCGGGGAGATGGGACAATTG TAGGGAGGGAGGACAAACGAGAAAGAGGAACATCGCAGGGAGGGAGGGAA GGAAGGAAGGTAGTGAAGGGAGGAATATAGTAGGGAGGGAGGAGGGGAAG GGTATGATAGGAGGAAGGGAAGGTGATGAAAGTGAAGTAAGTAGTGTAAG TGTTGTCAACAGCAAAAGAAATAAAGGAGAGGAAGAAGGGGATCGTACAA TTTAATGAAGGTGAAGGGGGAACAGAAAAATGAGAAAGAGGCAAATTTCA AAAAGCAGACAAAGACACCTCACAACCACCGAATGAGAAGAAGGGCGAGC ACCAGCACTTGCCAAGGCAAAACTTGACCTCCCCCTGGCACCACGCACAG AGAGTGTGTACACTAGCTAGGCAACGAAAGAATTTTTAGAAAAACACATC AAG back to topprotein sequence of NO07G04620.2 >NO07G04620.2-protein ID=NO07G04620.2-protein|Name=NO07G04620.2|organism=Nannochloropsis oceanica|type=polypeptide|length=548bp MYSMTKDRGGGGGGVGVTSKRNTRSSSNPSATAAGAHQHAVGLSNTRTTT TTTTRGMTRQRQHQHKEHVPPQLLVQPPLWQHPKIINTSSSTSSSTSTSR SSSSSSSGGNGGGSHPPSLILLQAQCLQVALQGISHTGSPTSSSVSPFLS GQERDALRRLAVYLLSLTVPKEGSKDGEEQVEQQQTIKGGEPSLMEVVVA DGEEVMGDEAQMPGNVGPRRQPLQHARAPERQEEKGSDCSITYSGDRGRN RKGRVKGKERLHAQPALQQAATLSFEAAAFSSSFPSSSSSSSSSSSSSSS SSSSSSSSSSSSSSATRLKRPSIRTTSTPTSEGWLIGPSFSSSPVSPPRA LRRPRLTKGNQSSCSFATTVSTKQEKKDGLQALPESVWQHALSFVPAKNL YAVMRTSRSFFTMTSPFEGIAATTGLLSITLPFSSLCPLFPIAEIPPLPE PWFDVHYFLSPPSLRPTPGFYHHWNLRAAEALHRPRPYISKQRHLNAKMR AILLDWVTDGIERGREGGKEGDALSFNSIVLLKSRLCLSPFLSLAAS* back to topmRNA from alignment at chr7:1302238..1305370- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >NO07G04620.2 ID=NO07G04620.2|Name=NO07G04620.2|organism=Nannochloropsis oceanica|type=mRNA|length=3133bp|location=Sequence derived from alignment at chr7:1302238..1305370- (Nannochloropsis oceanica) ATGTACAGCATGACTAAAGATAGAGGGGGCGGAGGCGGGGGCGTGGGAGT
CACGTCAAAGCGCAACACTCGCAGCTCCAGCAATCCAAGTGCCACTGCGG
CAGGTGCTCATCAACATGCCGTCGGCCTCTCCAACACAAGGACCACCACA
ACCACGACCACAAGAGGTATGACGCGGCAGCGTCAGCACCAGCACAAGGA
GCATGTGCCGCCACAATTGCTAGTGCAGCCGCCCCTCTGGCAACATCCCA
AAATCATCAACACGAGCAGCAGCACCAGCAGCAGCACTAGCACCAGCAGA
AGCAGCAGCAGTAGTAGCAGTGGCGGTAATGGCGGCGGCAGTCATCCCCC
CTCCCTCATCCTATTGCAGGCGCAATGCCTGCAAGTGGCCCTCCAAGGAA
TTTCGCACACCGGTTCCCCCACTTCGTCCTCCGTCTCCCCTTTCCTCAGC
GGACAGGAACGTGACGCTCTCCGCCGTCTTGCTGTCTACCTACTCAGCTT
GACGGTGCCCAAAGAGGGCAGCAAGGATGGAGAGGAACAAGTAGAGCAAC
AGCAGACGATTAAAGGTGGAGAGCCATCACTTATGGAGGTGGTGGTAGCG
GATGGCGAGGAGGTGATGGGAGATGAAGCGCAGATGCCAGGCAACGTGGG
CCCCAGGCGGCAGCCACTTCAGCACGCCCGAGCTCCCGAAAGACAGGAAG
AGAAAGGAAGCGATTGCAGCATTACATATAGTGGCGATAGAGGCCGTAAC
AGGAAGGGCAGAGTCAAGGGCAAGGAGCGGTTGCACGCACAGCCAGCATT
ACAGCAAGCAGCCACTCTTTCGTTCGAGGCTGCCGCCTTCTCTTCTTCCT
TCCCGTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCC
TCCTCATCCTCCTCCTCTTCTTCCTCCTCATCCTCCTCTAGTGCCACACG
CCTGAAGAGGCCAAGCATTCGCACCACTTCCACTCCTACTTCCGAAGGAT
GGCTGATCGGCCCCTCCTTTTCCTCTTCGCCTGTCTCCCCTCCCCGCGCC
TTGCGGCGTCCCCGCCTGACCAAAGGCAACCAGTCCTCGTGCTCTTTCGC
CACAACAGTGTCCACCAAGCAAGAAAAAAAGGACGGACTGCAGGCTTTGC
CCGAGTCGGTATGGCAGCACGCCTTGTCCTTCGTCCCAGCTAAGAACCTG
TATGCCGTCATGCGCACCTCCAGGTCCTTCTTCACCATGACATCGCCCTT
CGAAGGTATCGCCGCTACCACGGGCTTGCTTTCAATCACCCTCCCTTTCT
CTTCTCTCTGTCCGCTCTTCCCCATAGCTGAAATTCCACCTCTTCCCGAG
CCGTGGTTTGACGTTCACTATTTCCTATCCCCTCCGTCCCTCCGCCCCAC
CCCAGGTTTTTACCACCACTGGAATCTTCGCGCCGCGGAGGCGCTCCACC
GTCCTAGACCCTACATCAGCAAGCAAAGACACTTGAATGCCAAAATGCGA
GCTATTCTATTGGACTGGGTCACAGACGGTATAGAGAGAGGGAGGGAAGG
AGGGAAGGAGGGTGATGCGCTTTCCTTCAACTCGATTGTTTTACTCAAGT
CACGTTTATGTCTCTCGCCCTTTCTCTCCCTCGCTGCCTCCTAGTGCATC
AGTCCCTGTCCTTCCTGCCGGCCACTTTGCACAGGACCGCGTACGTGCTT
GATCATGTAAGGAGGGAGGGGGGATGAGAGGGAGAAGAGGGGGGAGGGGG
GAGGGGGACATGCAACTGGCTCATAGACCCACCGACACACTCTCCCTTCC
TCCCCTTCTTCCTCCCCCGCACCCTGTCTGCCTCAGTTCTTGAGCCGCAC
CGACAATGTGACGCGGGAGAAGCTGCAGCTGGTGGGTGTCACGGCCTTCA
TGATAGCGGCGAAAGGGATCGAGGCATCTCCGCCCGAGCACGACGACTGC
GCGTACTGGACCGACAACGCCTACAGCGGGGAGGAGGTTAGCCAGATGGA
GATTCGGATGCTCAAGGCTCTGCCTCCGTCCGCTCGCCCGCCCTCCCTCC
CTCCCACCGCCCTGGACTTCTTGTCACTGTACCTGAAGGAGGCAAGCGCG
GGCAAGCTCTCCGCCTGCCGCGCCCAATACTACTGCGAGCGCACCCTCCA
AGAACACGACATGCTCTCCTTCGCTCCCTCCCTCATCGCCGCCACCTCCA
TCCTTCTGGCCCTCAAGACGAACTCCAACCCTGGCCTGCCCTTTGCGTCC
CTCCGTTCCTCCGCCCCGCCCTCCCCCTCTTCATACTGGCCGGCATCCCT
GTCGCGCTACTCAGGCTACACAGAAGAGGAGATGGCGGCGTGTGCGCGGC
GGGTGTGTGAGCACGTCAAGACCACGGTGACTACCCTTTCGGGCCGCAAG
CTCGATGCTGTCAAGAGAAAGTTCGCGGGGGGCGTGTTCCTGGCAGCCAG
CAAAATGGAACCTCCTGCCTATGGAGAGGGGGATGGAGGCGGAGGCGGAG
GTGGAGGAGGAGGAGGAGGAGGAGGAGGAGAAGGAGGAGGAGGAGGGGGA
GAAAATATGCCTGTGGTTGGAGGGGAGGACATAGCGGTGATGGGGGGAGG
GGTAGTGATGGGAGGAGGAGAAGCAGCAGGAGGAGGAGGAGGAGCAGGAG
GAGGAGCGGTGGCAGCAGCAGCAGCAGCAGCAGCAGCGGTAGGAGGAGCA
GGTGTGGTGGCCGGGGAGATGGGACAATTGTAGGGAGGGAGGACAAACGA
GAAAGAGGAACATCGCAGGGAGGGAGGGAAGGAAGGAAGGTAGTGAAGGG
AGGAATATAGTAGGGAGGGAGGAGGGGAAGGGTATGATAGGAGGAAGGGA
AGGTGATGAAAGTGAAGTAAGTAGTGTAAGTGTTGTCAACAGCAAAAGAA
ATAAAGGAGAGGAAGAAGGGGATCGTACAATTTAATGAAGGTGAAGGGGG
AACAGAAAAATGAGAAAGAGGCAAATTTCAAAAAGCAGACAAAGACACCT
CACAACCACCGAATGAGAAGAAGGGCGAGCACCAGCACTTGCCAAGGCAA
AACTTGACCTCCCCCTGGCACCACGCACAGAGAGTGTGTACACTAGCTAG
GCAACGAAAGAATTTTTAGAAAAACACATCAAG back to topCoding sequence (CDS) from alignment at chr7:1302238..1305370- >NO07G04620.2 ID=NO07G04620.2|Name=NO07G04620.2|organism=Nannochloropsis oceanica|type=CDS|length=1644bp|location=Sequence derived from alignment at chr7:1302238..1305370- (Nannochloropsis oceanica) ATGTACAGCATGACTAAAGATAGAGGGGGCGGAGGCGGGGGCGTGGGAGT CACGTCAAAGCGCAACACTCGCAGCTCCAGCAATCCAAGTGCCACTGCGG CAGGTGCTCATCAACATGCCGTCGGCCTCTCCAACACAAGGACCACCACA ACCACGACCACAAGAGGTATGACGCGGCAGCGTCAGCACCAGCACAAGGA GCATGTGCCGCCACAATTGCTAGTGCAGCCGCCCCTCTGGCAACATCCCA AAATCATCAACACGAGCAGCAGCACCAGCAGCAGCACTAGCACCAGCAGA AGCAGCAGCAGTAGTAGCAGTGGCGGTAATGGCGGCGGCAGTCATCCCCC CTCCCTCATCCTATTGCAGGCGCAATGCCTGCAAGTGGCCCTCCAAGGAA TTTCGCACACCGGTTCCCCCACTTCGTCCTCCGTCTCCCCTTTCCTCAGC GGACAGGAACGTGACGCTCTCCGCCGTCTTGCTGTCTACCTACTCAGCTT GACGGTGCCCAAAGAGGGCAGCAAGGATGGAGAGGAACAAGTAGAGCAAC AGCAGACGATTAAAGGTGGAGAGCCATCACTTATGGAGGTGGTGGTAGCG GATGGCGAGGAGGTGATGGGAGATGAAGCGCAGATGCCAGGCAACGTGGG CCCCAGGCGGCAGCCACTTCAGCACGCCCGAGCTCCCGAAAGACAGGAAG AGAAAGGAAGCGATTGCAGCATTACATATAGTGGCGATAGAGGCCGTAAC AGGAAGGGCAGAGTCAAGGGCAAGGAGCGGTTGCACGCACAGCCAGCATT ACAGCAAGCAGCCACTCTTTCGTTCGAGGCTGCCGCCTTCTCTTCTTCCT TCCCGTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCC TCCTCATCCTCCTCCTCTTCTTCCTCCTCATCCTCCTCTAGTGCCACACG CCTGAAGAGGCCAAGCATTCGCACCACTTCCACTCCTACTTCCGAAGGAT GGCTGATCGGCCCCTCCTTTTCCTCTTCGCCTGTCTCCCCTCCCCGCGCC TTGCGGCGTCCCCGCCTGACCAAAGGCAACCAGTCCTCGTGCTCTTTCGC CACAACAGTGTCCACCAAGCAAGAAAAAAAGGACGGACTGCAGGCTTTGC CCGAGTCGGTATGGCAGCACGCCTTGTCCTTCGTCCCAGCTAAGAACCTG TATGCCGTCATGCGCACCTCCAGGTCCTTCTTCACCATGACATCGCCCTT CGAAGGTATCGCCGCTACCACGGGCTTGCTTTCAATCACCCTCCCTTTCT CTTCTCTCTGTCCGCTCTTCCCCATAGCTGAAATTCCACCTCTTCCCGAG CCGTGGTTTGACGTTCACTATTTCCTATCCCCTCCGTCCCTCCGCCCCAC CCCAGGTTTTTACCACCACTGGAATCTTCGCGCCGCGGAGGCGCTCCACC GTCCTAGACCCTACATCAGCAAGCAAAGACACTTGAATGCCAAAATGCGA GCTATTCTATTGGACTGGGTCACAGACGGTATAGAGAGAGGGAGGGAAGG AGGGAAGGAGGGTGATGCGCTTTCCTTCAACTCGATTGTTTTACTCAAGT CACGTTTATGTCTCTCGCCCTTTCTCTCCCTCGCTGCCTCCTAG back to top
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