NO04G00350.1, NO04G00350.1 (mRNA) Nannochloropsis oceanica

Overview
NameNO04G00350.1
Unique NameNO04G00350.1
TypemRNA
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2298
Alignment locationchr4:145822..148766 -

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Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr4genomechr4:145822..148766 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. oceanica IMET12017-10-24
Homology annotation for N. oceanica IMET12017-10-25
InterPro analysis for N. oceanica IMET12017-10-25
Annotated Terms
Homology
The following BLAST results are available for this feature:
BLAST of NO04G00350.1 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
NO04G00350NO04G00350Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
NO04G00350.1NO04G00350.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
NO04G00350.1.cds1NO04G00350.1.cds1Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO04G00350.1.cds2NO04G00350.1.cds2Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO04G00350.1.cds3NO04G00350.1.cds3Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO04G00350.1.cds4NO04G00350.1.cds4Nannochloropsis oceanica (N. oceanica IMET1)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>NO04G00350.1 ID=NO04G00350.1|Name=NO04G00350.1|organism=Nannochloropsis oceanica|type=mRNA|length=2298bp
TGACTACATAATTCCTCGATATTGATTGCTTGTTGTTGCTTGTTTATTTG
CTTATTTGGTTGTTTTTTCGCATGTATATTCTCTTATTGCGGCTATGCAA
CACGTCCTTTGTCTGCAGGCCCTGCTGGCAGCATGGCATTCAACGCTCTG
AAATGCGTAAGGGAACCCATGCAACGCTTGTTGCTCTTGGCCGCATCGCT
GCATCCGCGACTCTCCTTTCCGCTTGTCTATGTGTGTTGGTGGCAAGAAT
GCGTCACTCCTCTCCTCATGTTTCATGTGGTCTAAGCCTATAGGCTAAAA
CTTATAATGATGCGGTGTATGCGTGTGTGCGCACTACACTGAGCAATTAC
CCAGACATTATGTACGTACGCAAGGTTGTTTCGTATCGTGGCTCCTTTTG
TAGAGCTTGGCGTGTGGTAGTGGTACTAATGGAGGCCATTGGCATCTCAA
AGGTTTTTCCCCCTTCGATGGTTGCATGGTGCGGGAGGCAAGGAGAAGAG
CAGAGCAGCCAAATAACAGGCTGCCCTCGACTATTCATCATTACAAGCAG
CAGCAACCTATTCTATGTATACAAAAACCACCACACCCACACTCACGCCC
GACTATGCCTTAGCCAGCTCTGCAATGTGCTGTCTCGCTCCCTGGGACAT
CTTCTCTGAGCCGCGGCGCACAGATTGGCACGACCTCCTAAAAACGCCTC
AAGCGCATATAGATGGGGTCCGTGTCCATCACCAGCGAAAACACACTGCC
CCGCAGTCTAGCATACTAAATATTTATGTAGGAACATGCTGAAAATCACC
CCTAAAATGTATTCACTGTTTTCTATCCACCATTCCCCATACTTTTCCAC
AGCCTTCTTCTGACTTTGCAGCCAAGCTACCATGTTTATACAGTCTGCCC
TCCTCTTTGTGGCCTTCCTCTGCGTGGCAGATGCCCAGTTCGAGGCGCTG
ACGGTAAAGAACAAGACCAAGACGGGCAACAAGCTACCGAAAGGTGCCCA
CAACGACAAGACCAATCTACGCAAGGTAGATGGTTTCAATCTCTGCACCC
AGTCCTATGAGGCCTACATCAGCGGGACAGGTATCGCCGGTACAGGCGCA
TTTTCGTACCCCGTCTACCCCGGGGACTGCAACGAGGTGGACTCCTCGAC
CGAGCAAATCGGTACCTTGAGCGCCACGTGCTCTGGCAACCCCTATGAGG
GCACAACCTTCACTGCTACTGCCCTAGCAACCACCGAGAACTTCGTCAAT
CCTTTGCAAACTCTTAGCTGCAGCAACACAAGCGGCTGCCCTTCCTCCAA
TCCCGATATCTTTCCTCAATTCCTGGGAAGCTTGGTGAATAATTCCGTCA
TTCCCGACAACACCACTGCCGAAGAGGTGCAGACGTTTACGGATCAAATT
TGTGCTGACATATTCGGTGTAGTCCCGGCGCTTTCTAAAATTTCCCAGTG
CTCTGCCGAGCTCCGCCTCAGCGGCGACAACCGCAAGAACAAGCATCCGG
GGAGCGGCTTGTCGTTTGACTACACGACCAACACCACTTTAGTTCCCGCT
GGCAGCACTTACACCACCATCACTCAATATGGACTTGGCGCAAACTTCGG
GTATCAGAACCCAATTTTTTATGTTGTTTTTATCGAATTGTACGCTTACC
AGGTGATCGACAGTATCACGTGCGTTGCCCGGCCTAATACAATTGACGAG
ACGTTCGGCAAGATCTACTTTGGAGCCGGCCGCTTCGCGAAGTACGCCGC
ATCCAAGGTGGCCTCGGTGGAGCTGGACACGGTTTTAGTTAACGTTCTCA
ACGACGCATCAAACCCTGTCAACATGTTCGAGCTTACTCCTCAGGAATGG
ACGACCCAGCTGGAGGTGAACTACGTAAAGCCCTACCTGCACTCCAGCAT
GCTTTAAGGAAGGGCCATGGCATGACAGCTGTGCAAAGAGAATACGCGTG
CATTTCTTCCAGATGTCCGACACTTCCTGCACTCCTTTTTTCCGTTACGC
CAGCAAGCATCCTCGTCAGTGAGGATCTGAAGACGTGTTGAGGATATGTC
TGTGTCTGTGCTCTGTGTGCTGTGTGCCTTGTAAGTCGTGTTAAAAGGCT
GCGTCCTGCTTATTGCTTGCGTGGCAGATGGGGCTCACCATTATATGTGA
AGGGCTGCTGCCCCTAGTTGCGAATTCCGGAGGTGCTTGTGTACCTGCAC
TATGTGTTTCGTGTCTTGTGGGAGTTAGGTCTTGCCTGTGATCCAGGGCG
CTTGAATAAAAGAGAACAACTGCACGGATCGTAAAAGAAAAACTTGTC
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protein sequence of NO04G00350.1

>NO04G00350.1-protein ID=NO04G00350.1-protein|Name=NO04G00350.1|organism=Nannochloropsis oceanica|type=polypeptide|length=342bp
MFIQSALLFVAFLCVADAQFEALTVKNKTKTGNKLPKGAHNDKTNLRKVD
GFNLCTQSYEAYISGTGIAGTGAFSYPVYPGDCNEVDSSTEQIGTLSATC
SGNPYEGTTFTATALATTENFVNPLQTLSCSNTSGCPSSNPDIFPQFLGS
LVNNSVIPDNTTAEEVQTFTDQICADIFGVVPALSKISQCSAELRLSGDN
RKNKHPGSGLSFDYTTNTTLVPAGSTYTTITQYGLGANFGYQNPIFYVVF
IELYAYQVIDSITCVARPNTIDETFGKIYFGAGRFAKYAASKVASVELDT
VLVNVLNDASNPVNMFELTPQEWTTQLEVNYVKPYLHSSML*
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mRNA from alignment at chr4:145822..148766-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>NO04G00350.1 ID=NO04G00350.1|Name=NO04G00350.1|organism=Nannochloropsis oceanica|type=mRNA|length=2945bp|location=Sequence derived from alignment at chr4:145822..148766- (Nannochloropsis oceanica)
TGACTACATAATTCCTCGATATTGATTGCTTGTTGTTGCTTGTTTATTTG
CTTATTTGGTTGTTTTTTCGCATGTATATTCTCTTATTGCGGCTATGCAA
CACGTCCTTTGTCTGCAGGCCCTGCTGGCAGCATGGCATTCAACGCTCTG
AAATGCGTAAGGGAACCCATGCAACGCTTGTTGCTCTTGGCCGCATCGCT
GCATCCGCGACTCTCCTTTCCGCTTGTCTATGTGTGTTGGTGGCAAGAAT
GCGTCACTCCTCTCCTCATGTTTCATGTGGTCTAAGCCTATAGGCTAAAA
CTTATAATGATGCGGTGTATGCGTGTGTGCGCACTACACTGAGCAATTAC
CCAGACATTATGTACGTACGCAAGGTTGTTTCGTATCGTGGCTCCTTTTG
TAGAGCTTGGCGTGTGGTAGTGGTACTAATGGAGGCCATTGGCATCTCAA
AGGTTTTTCCCCCTTCGATGGTTGCATGGTGCGGGAGGCAAGGAGAAGAG
CAGAGCAGCCAAATAACAGGCTGCCCTCGACTATTCATCATTACAAGCAG
CAGCAACCTATTCTATGTATACAAAAACCACCACACCCACACTCACGCCC
GACTATGCCTTAGCCAGCTCTGCAATGTGCTGTCTCGCTCCCTGGGACAT
CTTCTCTGAGCCGCGGCGCACAGATTGGCACGACCTCCTAAAAACGCCTC
AAGCGCATATAGATGGGGTCCGTGTCCATCACCAGCGAAAACACACTGCC
CCGCAGTCTAGCATACTAAATATTTATGTAGGAACATGCTGAAAATCACC
CCTAAAATGTATTCACTGTTTTCTATCCACCATTCCCCATACTTTTCCAC
AGCCTTCTTCTGACTTTGCAGCCAAGCTACCATGTTTATACAGTCTGCCC
TCCTCTTTGTGGCCTTCCTCTGCGTGGCAGGCAAGTGCGTGGAAGATAAT
ATTTTGAGGGACTTGTGCCCTTATATATCTCATTGTCTTGTTTCTTTTTG
AGGACAATCTCTTGGCCCTCCAGCAGGCCTATATGCATACGGCACTGTAC
TGTGCACGCCTCACACCCCCAAGGGCAGAGCACTTTCGAATTATAACAAT
ATTTCTCAACCTCACTTTGGTTCCTTCTATTCCTCCTCCCATTCCCCTCC
TCCTTTCCTTCGCCTCCTTCTCTCCTTCGCCTGCTCTCCCCTTTCTCCTC
TTCCCTCTTCCCCTCCTCTCCCTTCCCCCATCTCTCCCACCTCTCTCATT
CTCTTCCACTCCTTCCCTCCTCACTATGCATTCACCACGACAGATGCCCA
GTTCGAGGCGCTGACGGTAAAGAACAAGACCAAGACGGGCAACAAGCTAC
CGAAAGGTGCCCACAACGACAAGACCAATCTACGCAAGGTAGATGGTTTC
AATCTCTGCACCCAGTCCTATGAGGCCTACATCAGCGGGACAGGTATCGC
CGGTACAGGCGCATTTTCGTACCCCGTCTACCCCGGGGACTGCAACGAGG
TATGCATGAATGACCAGAGCACATTTTTTAGGGATTCGTAAAAGGTCTGT
GGCCCCCACTCCTCACTCGAGTACATACCGTCCATCTCACATTTATTACT
GGACATTTCACAACCAACAGGTGGACTCCTCGACCGAGCAAATCGGTACC
TTGAGCGCCACGTGCTCTGGCAACCCCTATGAGGGCACAACCTTCACTGC
TACTGCCCTAGCAACCACCGAGAACTTCGTCAATCCTTTGCAAACTCTTA
GCTGCAGCAACACAAGCGGCTGCCCTTCCTCCAATCCCGATATCTTTCCT
CAATTCCTGGGAAGCTTGGTGAATAATTCCGTCATTCCCGACAACACCAC
TGCCGAAGAGGTGCAGACGTTTACGGATCAAATTTGTGCTGACATATTCG
GTGTAGTCCCGGCGCTTTCTAAAATTTCCCAGTGCTCTGCCGAGCTCCGC
CTCAGCGGCGACAACCGCAAGAACAAGCATCCGGGGAGCGGCTTGTCGTT
TGACTACACGACCAACACCACTTTAGTTCCCGGTACGTCGTTATGACGAT
GTATATGGATGAATGCATGTTGGGAGAGAGGTACAGGCCCGATGCAATAT
TATTAATGACTGGAAAGTTCGCTTTTAGCAAATTGTCAATCCCTAACCCT
AACTTTACTTTCCTCTCCTTTTATTCCATCACACTTTCCCTGCAGCTGGC
AGCACTTACACCACCATCACTCAATATGGACTTGGCGCAAACTTCGGGTA
TCAGAACCCAATTTTTTATGTTGTTTTTATCGAATTGTACGCTTACCAGG
TGATCGACAGTATCACGTGCGTTGCCCGGCCTAATACAATTGACGAGACG
TTCGGCAAGATCTACTTTGGAGCCGGCCGCTTCGCGAAGTACGCCGCATC
CAAGGTGGCCTCGGTGGAGCTGGACACGGTTTTAGTTAACGTTCTCAACG
ACGCATCAAACCCTGTCAACATGTTCGAGCTTACTCCTCAGGAATGGACG
ACCCAGCTGGAGGTGAACTACGTAAAGCCCTACCTGCACTCCAGCATGCT
TTAAGGAAGGGCCATGGCATGACAGCTGTGCAAAGAGAATACGCGTGCAT
TTCTTCCAGATGTCCGACACTTCCTGCACTCCTTTTTTCCGTTACGCCAG
CAAGCATCCTCGTCAGTGAGGATCTGAAGACGTGTTGAGGATATGTCTGT
GTCTGTGCTCTGTGTGCTGTGTGCCTTGTAAGTCGTGTTAAAAGGCTGCG
TCCTGCTTATTGCTTGCGTGGCAGATGGGGCTCACCATTATATGTGAAGG
GCTGCTGCCCCTAGTTGCGAATTCCGGAGGTGCTTGTGTACCTGCACTAT
GTGTTTCGTGTCTTGTGGGAGTTAGGTCTTGCCTGTGATCCAGGGCGCTT
GAATAAAAGAGAACAACTGCACGGATCGTAAAAGAAAAACTTGTC
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Coding sequence (CDS) from alignment at chr4:145822..148766-

>NO04G00350.1 ID=NO04G00350.1|Name=NO04G00350.1|organism=Nannochloropsis oceanica|type=CDS|length=1026bp|location=Sequence derived from alignment at chr4:145822..148766- (Nannochloropsis oceanica)
ATGTTTATACAGTCTGCCCTCCTCTTTGTGGCCTTCCTCTGCGTGGCAGA
TGCCCAGTTCGAGGCGCTGACGGTAAAGAACAAGACCAAGACGGGCAACA
AGCTACCGAAAGGTGCCCACAACGACAAGACCAATCTACGCAAGGTAGAT
GGTTTCAATCTCTGCACCCAGTCCTATGAGGCCTACATCAGCGGGACAGG
TATCGCCGGTACAGGCGCATTTTCGTACCCCGTCTACCCCGGGGACTGCA
ACGAGGTGGACTCCTCGACCGAGCAAATCGGTACCTTGAGCGCCACGTGC
TCTGGCAACCCCTATGAGGGCACAACCTTCACTGCTACTGCCCTAGCAAC
CACCGAGAACTTCGTCAATCCTTTGCAAACTCTTAGCTGCAGCAACACAA
GCGGCTGCCCTTCCTCCAATCCCGATATCTTTCCTCAATTCCTGGGAAGC
TTGGTGAATAATTCCGTCATTCCCGACAACACCACTGCCGAAGAGGTGCA
GACGTTTACGGATCAAATTTGTGCTGACATATTCGGTGTAGTCCCGGCGC
TTTCTAAAATTTCCCAGTGCTCTGCCGAGCTCCGCCTCAGCGGCGACAAC
CGCAAGAACAAGCATCCGGGGAGCGGCTTGTCGTTTGACTACACGACCAA
CACCACTTTAGTTCCCGCTGGCAGCACTTACACCACCATCACTCAATATG
GACTTGGCGCAAACTTCGGGTATCAGAACCCAATTTTTTATGTTGTTTTT
ATCGAATTGTACGCTTACCAGGTGATCGACAGTATCACGTGCGTTGCCCG
GCCTAATACAATTGACGAGACGTTCGGCAAGATCTACTTTGGAGCCGGCC
GCTTCGCGAAGTACGCCGCATCCAAGGTGGCCTCGGTGGAGCTGGACACG
GTTTTAGTTAACGTTCTCAACGACGCATCAAACCCTGTCAACATGTTCGA
GCTTACTCCTCAGGAATGGACGACCCAGCTGGAGGTGAACTACGTAAAGC
CCTACCTGCACTCCAGCATGCTTTAA
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Synonyms
Publications