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Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
chr11 | genome | chr11:475365..478147 - |
Analyses
This mRNA is derived from or has results from the following analyses
Homology
BLAST of NO11G01380.1 vs.
Match: EWM25073.1 (cell division protein [Nannochloropsis gaditana]) HSP 1 Score: 736.1 bits (1899), Expect = 7.200e-209 Identity = 404/475 (85.05%), Postives = 430/475 (90.53%), Query Frame = 0
Query: 1 MRPISSPLVCVAAAAGALLLQVGCSSSATMAEAAFLAPASSCITLARSTFIKSKTSLAADAASDVTALS-DIPNSRSLYQQQQLQEQLDLQAQLAAIPDTGSPCRIKVIGVGGGGSNAVNRMVTQDITGVEFWAINTDAQALAKSKVPFKLNIGNHVTRGLGAGGKPIVGRNAAEESREAIAEAVAGADLVFVTAGMGGGTGSGAAPVVAEIAKDLGILTVGVVTRPFGFEGRQRMAQAKSAIQEMQSKVDTLITVSNDRLLQIVPDNFPLTDAFLVADEALRDGVVGISDIIVKPGLINVDFADVRAVMQNAGTALMGTGWGKGKTRAQDAAVSAIKSPLLDFPIKKAKGIVFNVCGGTDLTLGEINAAAQVIYENVADDANIIFGAVVDEKLKDQVSITVLATGFSLDPNGDGDNLDDLLTTLDQQLSAPGRPKRVPQPPPPPPQQQQPAYSTPSPNVSQQPPPMYDESGYEG 475
M P+ P+V + A G LLLQ GCSSSAT+ +AAFLAPA+ I + RS+F SKTSLAADAASD +LS DIPNSRSLYQQQQL++Q L QLAAIPD+GSPCRIKVIGVGGGGSNAVNRMVTQDITGVEFWAINTDAQALAKSKVP+KLNIGNH+TRGLGAGGKP+VGRNAAEESRE IAEAVAGADLVFVTAGMGGGTGSGAAPVVAE+AKDLGILTVGVVTRPFGFEGRQRMAQAK+AIQEMQSKVDTLITVSNDRLLQIVPDNFPLTDAFLVADEALRDGVVGISDIIVKPGLINVDFADVRAVMQNAGTALMGTGWGKGKTRAQDAAVSAIKSPLLDFPIKKAKGIVFNVCGG+DLTLGEINAAAQVIYENVA+DANIIFGAVVD KLKDQVSITVLATGFSL+PN DNLDDLLTTLDQQLS PGRPK P P QQ A+ TP+P SQQPPP+Y+++ EG
Sbjct: 393 MWPLGFPVVRLMAGVGVLLLQSGCSSSATLTKAAFLAPATG-INVKRSSFYGSKTSLAADAASDAASLSRDIPNSRSLYQQQQLEQQRALHEQLAAIPDSGSPCRIKVIGVGGGGSNAVNRMVTQDITGVEFWAINTDAQALAKSKVPYKLNIGNHITRGLGAGGKPLVGRNAAEESREEIAEAVAGADLVFVTAGMGGGTGSGAAPVVAEVAKDLGILTVGVVTRPFGFEGRQRMAQAKAAIQEMQSKVDTLITVSNDRLLQIVPDNFPLTDAFLVADEALRDGVVGISDIIVKPGLINVDFADVRAVMQNAGTALMGTGWGKGKTRAQDAAVSAIKSPLLDFPIKKAKGIVFNVCGGSDLTLGEINAAAQVIYENVAEDANIIFGAVVDAKLKDQVSITVLATGFSLNPNASEDNLDDLLTTLDQQLSGPGRPKGAAS--PTPSSMQQSAFPTPTP-PSQQPPPVYEKTYSEG 863
The following BLAST results are available for this feature:
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >NO11G01380.1 ID=NO11G01380.1|Name=NO11G01380.1|organism=Nannochloropsis oceanica|type=mRNA|length=2783bp TTCTGTTGTAATCGGTTTTTACTCTCTCGGACGAGGCATCGCTCGCCTAA CACTCAAGCTCGAAATTAGACCCGTGGCTTTCGTGAAGACTTGCCTGCCA CTCTCGCAGAGTGCAGGCACTGGAGACGCAAGTTTTGCCCACGCAACAAA AGTGTCAAGAATGGGAAGGGATTATTTTCTGTGCATTCACCCTGGCAGCC AGGAGGCTAAGTGGTGCCCCTGCCTTGAGGCAGTCCCTCATTTTCTGCCT ACACTAGAACACACACCGCATCACCGACTCAGGCCGGACGAGAAGTAAAT ATGCTTATGAACAGGCGTGGTGGAGAGGTCGCCATGTTCAAGGCAGGCGT GAACTGGGGATCGCAAAGCATGGAGGAAGAAAACGACTGGGATTGAGGTG GTCTGCCGTCCCGTGTCTTATCACTTCCCGTCCCCCTCCCCCTCAAAACC ACAGATCGCCTCTTCTCAGCCACCACACGTGAGATACGACAGTCCATCAC CCATCCATGCGACCAATCAGCTCCCCCCTCGTGTGCGTCGCGGCGGCCGC AGGTGCCCTTCTTCTCCAGGTTGGTTGTTCTTCTTCCGCTACCATGGCCG AGGCCGCTTTTTTGGCCCCGGCATCCAGCTGCATCACCCTTGCACGCAGC ACCTTCATCAAGTCTAAAACCAGTCTCGCGGCCGACGCAGCCTCGGACGT GACTGCTCTCTCTGACATCCCCAATAGCCGGAGCCTATACCAGCAACAGC AGCTCCAGGAGCAACTTGACCTGCAAGCGCAGTTGGCTGCCATTCCCGAC ACGGGATCGCCGTGCCGCATCAAAGTCATTGGTGTGGGTGGGGGAGGAAG CAATGCGGTGAATCGCATGGTGACGCAAGACATTACAGGGGTGGAATTCT GGGCTATTAACACCGACGCGCAAGCCTTGGCGAAGTCCAAGGTGCCTTTC AAGCTCAACATCGGTAATCACGTCACCCGTGGTCTGGGCGCCGGCGGCAA GCCTATCGTAGGACGAAATGCTGCAGAAGAGTCAAGGGAGGCAATTGCTG AGGCAGTGGCGGGGGCAGATTTAGTGTTTGTCACTGCGGGGATGGGAGGA GGGACGGGCTCGGGTGCTGCGCCGGTGGTGGCGGAAATTGCGAAAGATCT TGGCATTTTGACGGTGGGTGTGGTGACGCGTCCCTTTGGCTTCGAAGGGC GGCAGAGGATGGCTCAGGCGAAGTCGGCGATTCAGGAGATGCAGAGTAAG GTGGATACGTTGATCACGGTTAGCAACGATAGGTTACTGCAAATAGTACC AGACAACTTCCCGTTGACCGACGCGTTTTTGGTGGCAGACGAGGCCTTGA GGGATGGCGTGGTTGGAATTTCGGACATCATTGTCAAACCGGGTCTGATC AATGTTGATTTTGCGGATGTCCGCGCGGTGATGCAGAATGCTGGAACGGC GCTGATGGGGACTGGTTGGGGCAAGGGGAAGACAAGGGCGCAGGATGCCG CAGTGAGTGCGATTAAAAGCCCTTTGCTCGATTTTCCCATTAAAAAAGCA AAAGGGATCGTGTTCAATGTGTGTGGAGGCACGGATTTGACTCTGGGGGA GATCAACGCAGCGGCGCAGGTGATTTATGAGAATGTGGCTGATGACGCCA ACATCATTTTCGGCGCTGTAGTAGACGAAAAGCTCAAGGATCAAGTTTCG ATTACTGTTCTCGCTACTGGTTTCTCCCTCGACCCCAACGGCGATGGTGA CAACCTTGACGACCTTCTTACCACTCTCGACCAGCAGCTCTCTGCTCCCG GCCGCCCCAAGCGTGTGCCGCAACCGCCGCCGCCGCCACCGCAGCAGCAA CAACCGGCTTACTCCACCCCTTCTCCCAACGTCTCGCAGCAGCCTCCTCC CATGTATGACGAATCGGGATATGAGGGGGCTGGAGCGCCGGGTGTCAAGG GCGGGAAGGAAGCAGGGAAGGGAGGTGTCGGTCGGTTTTTCAAGCTGTTT CGGAGATCGTAGATAGTGAGTATGATTGTTAATCGATTGATTGATTTATT AAAATGAGGAAAGAAGATGCCGTTCAGGGAGGGAAGTGAAAAATGTGAAG CAGCAGCAGTCATACCAAGATCGCTTGGAGCTTGGTGGAAGGGGCGCGCG AAGAGAATTGTGAGAAGGGGAATACAAGTAGGAAAGGCCTGAAGGAACGG TAGAGAAAACAGAGGACGGGAAGCCGTCAGGAGGTATCGTTGCGAAGCAG CCAAAAAAGAGTATAAGAAGAAGTAGTAAAGGAGGGAAGAAAGGAGGGAA GGGAGGGGGGAAGGAGGGACGGAACCAGAGTACCTACATGTGTTGTCTTC TTCAGGTCAGTTTCCATGTTAGTTATTCTCTCCCCCTATTTTTTTGTTTC GTTTTGTGCGCTGTAGATAGATAAAGTCATTTCCCCCGTTCCAATTCGGC AAGATTTGGCACCATTCCTATTTCCTCCTACCCACACATAACGCGTCAGT AAGCATCATTCCTGAGGGATATAGGATGAGGAACTTCCGTCGGCAGCACC GACGACGGCTTGCGGTCTCTCCTCTGATGTGTCTTCTTTCGTCTTCACTC AACGGCAGTAGGCTGATTGTCCAGTGTTGTTTGTAGGTGCTTCCTTCCTT GAGCGGTGTCTTGGAGAGAGAGAGGGCGCAGGAGTATGGAGGGCCGGAGC TTACAGAAACCTAAAAGAGAAAGAAAGAAAGTGTTAAGTTTGAAACAGAA GCAATAAAAAGCAAGACAGCCTATGAGCGAGAT back to topprotein sequence of NO11G01380.1 >NO11G01380.1-protein ID=NO11G01380.1-protein|Name=NO11G01380.1|organism=Nannochloropsis oceanica|type=polypeptide|length=502bp MRPISSPLVCVAAAAGALLLQVGCSSSATMAEAAFLAPASSCITLARSTF IKSKTSLAADAASDVTALSDIPNSRSLYQQQQLQEQLDLQAQLAAIPDTG SPCRIKVIGVGGGGSNAVNRMVTQDITGVEFWAINTDAQALAKSKVPFKL NIGNHVTRGLGAGGKPIVGRNAAEESREAIAEAVAGADLVFVTAGMGGGT GSGAAPVVAEIAKDLGILTVGVVTRPFGFEGRQRMAQAKSAIQEMQSKVD TLITVSNDRLLQIVPDNFPLTDAFLVADEALRDGVVGISDIIVKPGLINV DFADVRAVMQNAGTALMGTGWGKGKTRAQDAAVSAIKSPLLDFPIKKAKG IVFNVCGGTDLTLGEINAAAQVIYENVADDANIIFGAVVDEKLKDQVSIT VLATGFSLDPNGDGDNLDDLLTTLDQQLSAPGRPKRVPQPPPPPPQQQQP AYSTPSPNVSQQPPPMYDESGYEGAGAPGVKGGKEAGKGGVGRFFKLFRR S* back to topmRNA from alignment at chr11:475365..478147- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >NO11G01380.1 ID=NO11G01380.1|Name=NO11G01380.1|organism=Nannochloropsis oceanica|type=mRNA|length=2783bp|location=Sequence derived from alignment at chr11:475365..478147- (Nannochloropsis oceanica) TTCTGTTGTAATCGGTTTTTACTCTCTCGGACGAGGCATCGCTCGCCTAA
CACTCAAGCTCGAAATTAGACCCGTGGCTTTCGTGAAGACTTGCCTGCCA
CTCTCGCAGAGTGCAGGCACTGGAGACGCAAGTTTTGCCCACGCAACAAA
AGTGTCAAGAATGGGAAGGGATTATTTTCTGTGCATTCACCCTGGCAGCC
AGGAGGCTAAGTGGTGCCCCTGCCTTGAGGCAGTCCCTCATTTTCTGCCT
ACACTAGAACACACACCGCATCACCGACTCAGGCCGGACGAGAAGTAAAT
ATGCTTATGAACAGGCGTGGTGGAGAGGTCGCCATGTTCAAGGCAGGCGT
GAACTGGGGATCGCAAAGCATGGAGGAAGAAAACGACTGGGATTGAGGTG
GTCTGCCGTCCCGTGTCTTATCACTTCCCGTCCCCCTCCCCCTCAAAACC
ACAGATCGCCTCTTCTCAGCCACCACACGTGAGATACGACAGTCCATCAC
CCATCCATGCGACCAATCAGCTCCCCCCTCGTGTGCGTCGCGGCGGCCGC
AGGTGCCCTTCTTCTCCAGGTTGGTTGTTCTTCTTCCGCTACCATGGCCG
AGGCCGCTTTTTTGGCCCCGGCATCCAGCTGCATCACCCTTGCACGCAGC
ACCTTCATCAAGTCTAAAACCAGTCTCGCGGCCGACGCAGCCTCGGACGT
GACTGCTCTCTCTGACATCCCCAATAGCCGGAGCCTATACCAGCAACAGC
AGCTCCAGGAGCAACTTGACCTGCAAGCGCAGTTGGCTGCCATTCCCGAC
ACGGGATCGCCGTGCCGCATCAAAGTCATTGGTGTGGGTGGGGGAGGAAG
CAATGCGGTGAATCGCATGGTGACGCAAGACATTACAGGGGTGGAATTCT
GGGCTATTAACACCGACGCGCAAGCCTTGGCGAAGTCCAAGGTGCCTTTC
AAGCTCAACATCGGTAATCACGTCACCCGTGGTCTGGGCGCCGGCGGCAA
GCCTATCGTAGGACGAAATGCTGCAGAAGAGTCAAGGGAGGCAATTGCTG
AGGCAGTGGCGGGGGCAGATTTAGTGTTTGTCACTGCGGGGATGGGAGGA
GGGACGGGCTCGGGTGCTGCGCCGGTGGTGGCGGAAATTGCGAAAGATCT
TGGCATTTTGACGGTGGGTGTGGTGACGCGTCCCTTTGGCTTCGAAGGGC
GGCAGAGGATGGCTCAGGCGAAGTCGGCGATTCAGGAGATGCAGAGTAAG
GTGGATACGTTGATCACGGTTAGCAACGATAGGTTACTGCAAATAGTACC
AGACAACTTCCCGTTGACCGACGCGTTTTTGGTGGCAGACGAGGCCTTGA
GGGATGGCGTGGTTGGAATTTCGGACATCATTGTCAAACCGGGTCTGATC
AATGTTGATTTTGCGGATGTCCGCGCGGTGATGCAGAATGCTGGAACGGC
GCTGATGGGGACTGGTTGGGGCAAGGGGAAGACAAGGGCGCAGGATGCCG
CAGTGAGTGCGATTAAAAGCCCTTTGCTCGATTTTCCCATTAAAAAAGCA
AAAGGGATCGTGTTCAATGTGTGTGGAGGCACGGATTTGACTCTGGGGGA
GATCAACGCAGCGGCGCAGGTGATTTATGAGAATGTGGCTGATGACGCCA
ACATCATTTTCGGCGCTGTAGTAGACGAAAAGCTCAAGGATCAAGTTTCG
ATTACTGTTCTCGCTACTGGTTTCTCCCTCGACCCCAACGGCGATGGTGA
CAACCTTGACGACCTTCTTACCACTCTCGACCAGCAGCTCTCTGCTCCCG
GCCGCCCCAAGCGTGTGCCGCAACCGCCGCCGCCGCCACCGCAGCAGCAA
CAACCGGCTTACTCCACCCCTTCTCCCAACGTCTCGCAGCAGCCTCCTCC
CATGTATGACGAATCGGGATATGAGGGGGCTGGAGCGCCGGGTGTCAAGG
GCGGGAAGGAAGCAGGGAAGGGAGGTGTCGGTCGGTTTTTCAAGCTGTTT
CGGAGATCGTAGATAGTGAGTATGATTGTTAATCGATTGATTGATTTATT
AAAATGAGGAAAGAAGATGCCGTTCAGGGAGGGAAGTGAAAAATGTGAAG
CAGCAGCAGTCATACCAAGATCGCTTGGAGCTTGGTGGAAGGGGCGCGCG
AAGAGAATTGTGAGAAGGGGAATACAAGTAGGAAAGGCCTGAAGGAACGG
TAGAGAAAACAGAGGACGGGAAGCCGTCAGGAGGTATCGTTGCGAAGCAG
CCAAAAAAGAGTATAAGAAGAAGTAGTAAAGGAGGGAAGAAAGGAGGGAA
GGGAGGGGGGAAGGAGGGACGGAACCAGAGTACCTACATGTGTTGTCTTC
TTCAGGTCAGTTTCCATGTTAGTTATTCTCTCCCCCTATTTTTTTGTTTC
GTTTTGTGCGCTGTAGATAGATAAAGTCATTTCCCCCGTTCCAATTCGGC
AAGATTTGGCACCATTCCTATTTCCTCCTACCCACACATAACGCGTCAGT
AAGCATCATTCCTGAGGGATATAGGATGAGGAACTTCCGTCGGCAGCACC
GACGACGGCTTGCGGTCTCTCCTCTGATGTGTCTTCTTTCGTCTTCACTC
AACGGCAGTAGGCTGATTGTCCAGTGTTGTTTGTAGGTGCTTCCTTCCTT
GAGCGGTGTCTTGGAGAGAGAGAGGGCGCAGGAGTATGGAGGGCCGGAGC
TTACAGAAACCTAAAAGAGAAAGAAAGAAAGTGTTAAGTTTGAAACAGAA
GCAATAAAAAGCAAGACAGCCTATGAGCGAGAT back to topCoding sequence (CDS) from alignment at chr11:475365..478147- >NO11G01380.1 ID=NO11G01380.1|Name=NO11G01380.1|organism=Nannochloropsis oceanica|type=CDS|length=1506bp|location=Sequence derived from alignment at chr11:475365..478147- (Nannochloropsis oceanica) ATGCGACCAATCAGCTCCCCCCTCGTGTGCGTCGCGGCGGCCGCAGGTGC CCTTCTTCTCCAGGTTGGTTGTTCTTCTTCCGCTACCATGGCCGAGGCCG CTTTTTTGGCCCCGGCATCCAGCTGCATCACCCTTGCACGCAGCACCTTC ATCAAGTCTAAAACCAGTCTCGCGGCCGACGCAGCCTCGGACGTGACTGC TCTCTCTGACATCCCCAATAGCCGGAGCCTATACCAGCAACAGCAGCTCC AGGAGCAACTTGACCTGCAAGCGCAGTTGGCTGCCATTCCCGACACGGGA TCGCCGTGCCGCATCAAAGTCATTGGTGTGGGTGGGGGAGGAAGCAATGC GGTGAATCGCATGGTGACGCAAGACATTACAGGGGTGGAATTCTGGGCTA TTAACACCGACGCGCAAGCCTTGGCGAAGTCCAAGGTGCCTTTCAAGCTC AACATCGGTAATCACGTCACCCGTGGTCTGGGCGCCGGCGGCAAGCCTAT CGTAGGACGAAATGCTGCAGAAGAGTCAAGGGAGGCAATTGCTGAGGCAG TGGCGGGGGCAGATTTAGTGTTTGTCACTGCGGGGATGGGAGGAGGGACG GGCTCGGGTGCTGCGCCGGTGGTGGCGGAAATTGCGAAAGATCTTGGCAT TTTGACGGTGGGTGTGGTGACGCGTCCCTTTGGCTTCGAAGGGCGGCAGA GGATGGCTCAGGCGAAGTCGGCGATTCAGGAGATGCAGAGTAAGGTGGAT ACGTTGATCACGGTTAGCAACGATAGGTTACTGCAAATAGTACCAGACAA CTTCCCGTTGACCGACGCGTTTTTGGTGGCAGACGAGGCCTTGAGGGATG GCGTGGTTGGAATTTCGGACATCATTGTCAAACCGGGTCTGATCAATGTT GATTTTGCGGATGTCCGCGCGGTGATGCAGAATGCTGGAACGGCGCTGAT GGGGACTGGTTGGGGCAAGGGGAAGACAAGGGCGCAGGATGCCGCAGTGA GTGCGATTAAAAGCCCTTTGCTCGATTTTCCCATTAAAAAAGCAAAAGGG ATCGTGTTCAATGTGTGTGGAGGCACGGATTTGACTCTGGGGGAGATCAA CGCAGCGGCGCAGGTGATTTATGAGAATGTGGCTGATGACGCCAACATCA TTTTCGGCGCTGTAGTAGACGAAAAGCTCAAGGATCAAGTTTCGATTACT GTTCTCGCTACTGGTTTCTCCCTCGACCCCAACGGCGATGGTGACAACCT TGACGACCTTCTTACCACTCTCGACCAGCAGCTCTCTGCTCCCGGCCGCC CCAAGCGTGTGCCGCAACCGCCGCCGCCGCCACCGCAGCAGCAACAACCG GCTTACTCCACCCCTTCTCCCAACGTCTCGCAGCAGCCTCCTCCCATGTA TGACGAATCGGGATATGAGGGGGCTGGAGCGCCGGGTGTCAAGGGCGGGA AGGAAGCAGGGAAGGGAGGTGTCGGTCGGTTTTTCAAGCTGTTTCGGAGA TCGTAG back to top
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