NO01G02250.1, NO01G02250.1 (mRNA) Nannochloropsis oceanica | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	NO01G02250.1
Unique Name	NO01G02250.1
Type	mRNA
Organism	Nannochloropsis oceanica (N. oceanica IMET1)
Sequence length	4037
Alignment location	chr1:585070..589344 -

Link to JBrowse

Properties

Mutants

Expression

No biomaterial libraries express this feature.

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
chr1	genome	chr1:585070..589344 -

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Gene prediction for N. oceanica IMET1	2017-10-24
Homology annotation for N. oceanica IMET1	2017-10-25
InterPro analysis for N. oceanica IMET1	2017-10-25

Annotated Terms

Homology

[Close]

BLAST of NO01G02250.1 vs.
Match: EWM29114.1 (adp-ribosylation factor gtpase-activating protein agd14 [Nannochloropsis gaditana])

HSP 1 Score: 210.7 bits (535), Expect = 1.100e-50
Identity = 199/527 (37.76%), Postives = 248/527 (47.06%), Query Frame = 0

Query:    2 VTTAAEEKRAKQLLEQIRRMPHNKRCVNCDKESIAGHNNVCTKFQTFVCNTCKSAHQSFSHRCKSISLSNWTHTEVHYLSDSAGGGNANARLTWLGKLQGHLRLRPDDPLDKVKAFVNDAYNHNRYWKEKEAAGTNSYVATTERPGSVSSELESVAFTQQR----RQQREGMLS----TSTTK-FPHVRADTAPTPVAAPVVTDLLDFFGDFTQATLPSVTPSHRPIVDASHGTARPPSGGAGDFAFQTGKGNSNSGIVSSAAPRASPSYSPVPTGPPPQADDWQHFGPTVASSSVPGDSTFFATSAVV--PASNFYDCTN-GSAFG-FMSSGPSATPHHNEFCDFAAASVPPCPTGRQQPLTCTAPPPRPVPPAMRLTRPLIEDPFEVLAPPQQPSFSSASSNLYIPSQQPHPWGPMPASAMLLMKSGDGSLQANRTSGDGGCGSGRNPHRPSHMQTQPPRPSDPQMPM-MTMNGGGAASGPPRRFLPSQGMVGGPRPHIPVYGQHQQQQYSSQASDPFAGLDWRK 515
            +   A++KR K LLEQIRR+PHNK CVNC K SIAGH ++C KF TF+C+TCKSAHQSFSHRCK+++LSNWT  EV  LSD AGGGN NAR TWLGKL G L LRP D L  VK FVNDAYNH RYWK+ +    ++ VA     G+ S+   + +  +Q       + EG +S     ST K    + +D  PT  A    T L         AT+ S T     +         P +G  G    QTG            AP++S S     T   PQ  D Q FG  + + S P + T   T A +  P S+     N    FG FMSS PS      +    +  S+ P P         TAP PR   P+M   R   EDPF +LAP +    S   S+L+  +Q+ HP G  PA  +     G G L     S +             H   QP      Q+P+ M MN  GA                         G    QQ +SQ  DPFA LDWRK
Sbjct:    1 MAATADDKRIKLLLEQIRRLPHNKSCVNCGKVSIAGHGDICIKFLTFLCHTCKSAHQSFSHRCKNVTLSNWTLAEVQQLSDQAGGGNQNARQTWLGKLDGTLLLRPGDSLQDVKNFVNDAYNHKRYWKDPQMIAKSTSVAA---EGTQSASASTASLPRQSIGGIGSRLEGPMSEIPDASTVKNLLDLESDCIPTGPARSFPTLL-------EPATVTSCTQFSERVARNGLSDRCPLTGSVG----QTG------------APKSSSSLMCTSTIAAPQPQDMQ-FGDFLGAFS-PSNPTPGRTPAALAQPGSHSNQALNLNDDFGEFMSSPPS------QGLSMSTQSMRPVP--------LTAPQPR---PSMVAPRVQPEDPFAMLAPDRPTLASIPLSHLH--AQKMHPVGLAPACVI-----GSGVLAPQVFSINA-----------PHSSFQP-----GQVPLHMVMNATGAH------------------------GWKAGQQCTSQEPDPFADLDWRK 435

The following BLAST results are available for this feature:

BLAST of NO01G02250.1 vs.

BLAST of NO01G02250.1 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 1


Match Name	E-value	Identity	Description
EWM29114.1	1.100e-50	37.76	adp-ribosylation factor gtpase-activating protein ...	[more]

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
NO01G02250	NO01G02250	Nannochloropsis oceanica (N. oceanica IMET1)	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
NO01G02250.1	NO01G02250.1-protein	Nannochloropsis oceanica (N. oceanica IMET1)	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
NO01G02250.1.cds1	NO01G02250.1.cds1	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO01G02250.1.cds2	NO01G02250.1.cds2	Nannochloropsis oceanica (N. oceanica IMET1)	CDS

Sequences

The following sequences are available for this feature:

mRNA sequence
protein sequence
mRNA from alignment at chr1:585070..589344-
coding sequence from alignment at chr1:585070..589344-

mRNA sequence

>NO01G02250.1 ID=NO01G02250.1|Name=NO01G02250.1|organism=Nannochloropsis oceanica|type=mRNA|length=4037bp
TGATGTATCCAAATGCAATTTTATTTACTTTTTTGTAAATTTATTGTTAA
TTCCTCTTCCCTGAGATCTGCATCTTTCATTTGGTTCGACCTCCCACAAA
TCCTTAAACGACGGCGCTGGTGGGTATGCTCTGATAGCTTTGTCTTCTGC
TGTGCTGTGGCCTCCCATTGGCAGAGCGATCGATGGAAAATCCCGAGACC
GACGACGAAATGTCCCGCTTGCGATTGATGATTGCAGCGGCGCTCAAATG
GCTCTTGCGGAGAAAAAAAATCACGCCCGCAAAAAGAAGGATATTGAGGA
GGAAGGACCCAATAAACGCTGTAACCCACGTCTGGGGTTTGACATACTCC
CACGGTAAAGCGTTGATCTCATACAGCATGGCCCCAAGCGCCCACGTTAC
CTTGAGCCCGTCAATCTTGTTCACCACTGTCAGGTTCCGCGATGCCTCAA
AACCATAACCCTCCGTGAGCAGCGCGTACCCAAACGCGGCCACGAAGCAG
TAATGCGCTAAGAAGGGCAAGCTCTGCTCCCGCTTCTTCTTCTTCTTCTT
CTGGTTCATATGCTGCAGCTGCCGCCAATCCATGGCACACAAACTCTCGG
TCCGCTCCTTGTACACTGTCATGTTGGCCTTGACGTCCGGCATGTCCAGC
ATCTTCCAAATATCTTTAAAGGTGCCGAACCCGTAAAACTCTCCGAAATT
TCCAGGTGCGGGGGGAAGATCGGGTTGGTACACCCCAGCAAACGAGCATT
GATTGTTGTGAGCAAAGTCACACCAAGAATTAAGATCCTTTCGCAGGAGC
GGCACCACCTGCGTCATGCAGCTACTGAAGGAGCCGGCCGTCCCCTCTAC
GACATAGTTTTTCCCTCTGTCCCTGAACACCTCCTCGTACCCATCAGGCA
AGCACGGGTTTGTAACCCTCAGGGACCCCACAGGCACCATCTTGTTGCTA
TATATGCTACCATTGCTGCTGCTGCCCTTCTCACTCTTCTTCGTCTTGTC
CTTGTTGGCGTCTGCCGCGTCCGTCAAGGTGGTGTGCAGCCTGTCCCGGG
CCGAGTTGATCCCGAAGTACAGGAAGGAGTGAACATAGACGTTCCAATGC
TTCTGGGCGCCAATCTGCAGCTTGAACATGTTCGCCAGGATATCCTGATT
AGGTACAAAAAACGAAATCTGCGTGGAGGCGCCTCCCAGATCTAGTGCAC
CCACGGACGAGTTGGCGTCAGCCGTTCCCGTTCCCGTACTTGCCGGCAGC
AGCTTCCCCAACAGAAAGTTGATGGCTGTCCATCCGTAAACGCCTTCTTC
CTCCCCCGACACAACACGGGCAAAGTCGTGTTCGAAGTAGAAGGGACACA
GCGTTTCGTTCATCATGTATCGCCGGACTTCCGAAACGATGGCCTCTCGC
TGCTTGGTAGGTAATTGACGCATGCCCCCCGTCGCCTTGAGATAAATGGG
GAAATACTGGAACTGATGCTCCTTCCCCGCCAGGACATCTTTGGCAAAGG
ATATAAGCGGGTCCAAAGACGAACCCACGTCCTCGGGGCTGTCGGCAAAC
GCGGAGATGCCGGGGGCGAGCCGATCCGTCCATCTGTTGCTGGTGAGAGG
ATAGCTAAATGGAGGGGGCACGGTTTCAAAGCGCCGGGCATCCCATTGAT
ATACGTGCATGCGGCTCCCTGTGCTGCCAGCGTCAATGATCAGTCCGTGC
TGCGTCGGCCAGGTAATCTTCATTGTTGTCGGCTTGGTTGTACCGACTTG
AGTGGAGGAAGGCGGGGGTGCCGGGGATGGAAATGGAGGAGCTAGAGGAG
GGGGCGGCGGAGGCATGTTGGGCTGGAAAGGCGTCGACGGGGGCTGCTCT
TGCTGGGCTTCTACGATGACTAGCAGCAATGCCACCAGGAAGTGCCGTCG
TGCCTGCTGCATCGGTCGAATGCTCACGAATACAGATTCGTGTACCATAG
TAAGAGCAAGACAAGCAGAGATGTCTGTTTGCTTGGGAGACTTGGGAACT
GAAGTCCCGACTCCGGACACGTTCAGGATTGAGCCTAGAGGGCGCTATGT
CCCTTTTGTGTGAAACGCGAAGGTGAGCTCGGTTCGTGCGGAGGTTGATA
GGTGGATTACTTTACTTATCGCTCGTGAAACTTGATGATGTTGCAGCTCG
CTCGTCACAACGGCGGTACGCGGCCCAGAAGGCCTAGCGTAATGCTACTC
CATGTTCTTGGCGTCGGCGTCGGCGTCGCAAAGCCACCCGTGGCCTGACT
GGAGCCCTAAACGGCAGTATCACAACACAAGGCCTCTTCCGGCAGGAAGG
CTGACCATGAGACTACTACTGTCCACTTTCCGTTCTTCTCCCACGCCACT
ACGCAAGTTGAGACAGAGACAGCCAGGACCAAGACGCACGACGCCGCCCA
GCGACCGTACATGAGTCATGGTCACCACCGCGGCAGAGGAAAAGCGCGCC
AAGCAGTTGCTGGAGCAGATCCGTCGCATGCCTCACAACAAACGTTGTGT
TAATTGTGACAAGGAAAGCATTGCGGGTCATAATAACGTGTGCACCAAAT
TTCAGACATTTGTCTGCAACACTTGCAAAAGCGCACACCAGTCTTTCTCT
CACCGGTGCAAGAGCATCAGCCTTTCTAACTGGACCCATACCGAGGTTCA
TTATCTCTCAGACTCTGCTGGGGGTGGCAATGCTAATGCGCGCTTGACCT
GGCTTGGCAAGCTTCAGGGACACCTGAGGCTCCGGCCAGACGATCCGCTG
GATAAAGTCAAAGCATTTGTTAACGACGCATACAACCATAATCGGTACTG
GAAGGAGAAGGAGGCCGCTGGCACCAATAGTTACGTCGCCACCACAGAAA
GGCCTGGATCTGTCTCAAGTGAATTGGAGTCCGTTGCATTCACGCAGCAG
CGACGGCAGCAACGGGAAGGCATGTTGTCCACTAGCACAACCAAATTTCC
TCATGTCCGGGCTGACACTGCTCCTACTCCTGTCGCCGCTCCAGTCGTCA
CGGACCTTCTTGACTTTTTCGGCGACTTCACTCAAGCAACGCTCCCCTCC
GTGACTCCCTCCCATCGTCCCATCGTTGATGCCAGTCATGGGACAGCTAG
GCCACCTTCCGGAGGTGCAGGCGACTTTGCCTTTCAAACTGGCAAGGGCA
ATTCAAACTCCGGTATCGTGAGTAGCGCTGCCCCTCGCGCTTCCCCGTCC
TACTCCCCGGTGCCGACGGGACCCCCGCCACAAGCAGATGATTGGCAACA
CTTTGGACCCACTGTGGCTTCTTCTTCTGTGCCTGGAGATTCCACATTCT
TTGCGACATCAGCAGTGGTGCCCGCATCGAATTTTTATGACTGCACTAAC
GGCAGCGCATTCGGCTTCATGAGTTCTGGGCCAAGCGCAACTCCTCACCA
CAATGAATTTTGCGACTTCGCAGCTGCTTCTGTCCCTCCCTGTCCTACGG
GTAGGCAACAACCTTTGACCTGCACTGCTCCCCCCCCGCGACCTGTCCCC
CCCGCGATGAGGCTGACTCGCCCTTTGATAGAGGATCCTTTTGAGGTCCT
TGCACCGCCGCAGCAGCCTTCCTTCTCCTCTGCTTCCTCCAATCTGTACA
TCCCCTCCCAGCAGCCACACCCCTGGGGGCCCATGCCTGCGTCTGCGATG
CTGTTGATGAAAAGTGGAGATGGGTCTTTGCAAGCTAACAGAACTTCTGG
TGATGGTGGCTGTGGTTCCGGGAGGAACCCCCACCGTCCGTCTCACATGC
AGACGCAACCACCGCGGCCTTCCGACCCACAGATGCCAATGATGACGATG
AATGGTGGTGGTGCAGCTTCTGGTCCACCTCGACGATTTTTGCCCTCCCA
AGGGATGGTGGGTGGGCCCCGCCCGCATATTCCGGTGTATGGCCAACACC
AGCAGCAGCAGTATTCGTCGCAAGCGTCTGACCCGTTCGCAGGTCTGGAT
TGGCGCAAGTAGGAGAAGAAGACACGCATTCCATCGATGAACCCTGTATG
AGGTGAAGAATCATTAATATTAAAGCGATAACAGGGA

protein sequence of NO01G02250.1

>NO01G02250.1-protein ID=NO01G02250.1-protein|Name=NO01G02250.1|organism=Nannochloropsis oceanica|type=polypeptide|length=515bp
MVTTAAEEKRAKQLLEQIRRMPHNKRCVNCDKESIAGHNNVCTKFQTFVC
NTCKSAHQSFSHRCKSISLSNWTHTEVHYLSDSAGGGNANARLTWLGKLQ
GHLRLRPDDPLDKVKAFVNDAYNHNRYWKEKEAAGTNSYVATTERPGSVS
SELESVAFTQQRRQQREGMLSTSTTKFPHVRADTAPTPVAAPVVTDLLDF
FGDFTQATLPSVTPSHRPIVDASHGTARPPSGGAGDFAFQTGKGNSNSGI
VSSAAPRASPSYSPVPTGPPPQADDWQHFGPTVASSSVPGDSTFFATSAV
VPASNFYDCTNGSAFGFMSSGPSATPHHNEFCDFAAASVPPCPTGRQQPL
TCTAPPPRPVPPAMRLTRPLIEDPFEVLAPPQQPSFSSASSNLYIPSQQP
HPWGPMPASAMLLMKSGDGSLQANRTSGDGGCGSGRNPHRPSHMQTQPPR
PSDPQMPMMTMNGGGAASGPPRRFLPSQGMVGGPRPHIPVYGQHQQQQYS
SQASDPFAGLDWRK*

mRNA from alignment at chr1:585070..589344-

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>NO01G02250.1 ID=NO01G02250.1|Name=NO01G02250.1|organism=Nannochloropsis oceanica|type=mRNA|length=4275bp|location=Sequence derived from alignment at chr1:585070..589344- (Nannochloropsis oceanica)
TGATGTATCCAAATGCAATTTTATTTACTTTTTTGTAAATTTATTGTTAA
TTCCTCTTCCCTGAGATCTGCATCTTTCATTTGGTTCGACCTCCCACAAA
TCCTTAAACGACGGCGCTGGTGGGTATGCTCTGATAGCTTTGTCTTCTGC
TGTGCTGTGGCCTCCCATTGGCAGAGCGATCGATGGAAAATCCCGAGACC
GACGACGAAATGTCCCGCTTGCGATTGATGATTGCAGCGGCGCTCAAATG
GCTCTTGCGGAGAAAAAAAATCACGCCCGCAAAAAGAAGGATATTGAGGA
GGAAGGACCCAATAAACGCTGTAACCCACGTCTGGGGTTTGACATACTCC
CACGGTAAAGCGTTGATCTCATACAGCATGGCCCCAAGCGCCCACGTTAC
CTTGAGCCCGTCAATCTTGTTCACCACTGTCAGGTTCCGCGATGCCTCAA
AACCATAACCCTCCGTGAGCAGCGCGTACCCAAACGCGGCCACGAAGCAG
TAATGCGCTAAGAAGGGCAAGCTCTGCTCCCGCTTCTTCTTCTTCTTCTT
CTGGTTCATATGCTGCAGCTGCCGCCAATCCATGGCACACAAACTCTCGG
TCCGCTCCTTGTACACTGTCATGTTGGCCTTGACGTCCGGCATGTCCAGC
ATCTTCCAAATATCTTTAAAGGTGCCGAACCCGTAAAACTCTCCGAAATT
TCCAGGTGCGGGGGGAAGATCGGGTTGGTACACCCCAGCAAACGAGCATT
GATTGTTGTGAGCAAAGTCACACCAAGAATTAAGATCCTTTCGCAGGAGC
GGCACCACCTGCGTCATGCAGCTACTGAAGGAGCCGGCCGTCCCCTCTAC
GACATAGTTTTTCCCTCTGTCCCTGAACACCTCCTCGTACCCATCAGGCA
AGCACGGGTTTGTAACCCTCAGGGACCCCACAGGCACCATCTTGTTGCTA
TATATGCTACCATTGCTGCTGCTGCCCTTCTCACTCTTCTTCGTCTTGTC
CTTGTTGGCGTCTGCCGCGTCCGTCAAGGTGGTGTGCAGCCTGTCCCGGG
CCGAGTTGATCCCGAAGTACAGGAAGGAGTGAACATAGACGTTCCAATGC
TTCTGGGCGCCAATCTGCAGCTTGAACATGTTCGCCAGGATATCCTGATT
AGGTACAAAAAACGAAATCTGCGTGGAGGCGCCTCCCAGATCTAGTGCAC
CCACGGACGAGTTGGCGTCAGCCGTTCCCGTTCCCGTACTTGCCGGCAGC
AGCTTCCCCAACAGAAAGTTGATGGCTGTCCATCCGTAAACGCCTTCTTC
CTCCCCCGACACAACACGGGCAAAGTCGTGTTCGAAGTAGAAGGGACACA
GCGTTTCGTTCATCATGTATCGCCGGACTTCCGAAACGATGGCCTCTCGC
TGCTTGGTAGGTAATTGACGCATGCCCCCCGTCGCCTTGAGATAAATGGG
GAAATACTGGAACTGATGCTCCTTCCCCGCCAGGACATCTTTGGCAAAGG
ATATAAGCGGGTCCAAAGACGAACCCACGTCCTCGGGGCTGTCGGCAAAC
GCGGAGATGCCGGGGGCGAGCCGATCCGTCCATCTGTTGCTGGTGAGAGG
ATAGCTAAATGGAGGGGGCACGGTTTCAAAGCGCCGGGCATCCCATTGAT
ATACGTGCATGCGGCTCCCTGTGCTGCCAGCGTCAATGATCAGTCCGTGC
TGCGTCGGCCAGGTAATCTTCATTGTTGTCGGCTTGGTTGTACCGACTTG
AGTGGAGGAAGGCGGGGGTGCCGGGGATGGAAATGGAGGAGCTAGAGGAG
GGGGCGGCGGAGGCATGTTGGGCTGGAAAGGCGTCGACGGGGGCTGCTCT
TGCTGGGCTTCTACGATGACTAGCAGCAATGCCACCAGGAAGTGCCGTCG
TGCCTGCTGCATCGGTCGAATGCTCACGAATACAGATTCGTGTACCATAG
TAAGAGCAAGACAAGCAGAGATGTCTGTTTGCTTGGGAGACTTGGGAACT
GAAGTCCCGACTCCGGACACGTTCAGGATTGAGCCTAGAGGGCGCTATGT
CCCTTTTGTGTGAAACGCGAAGGTGAGCTCGGTTCGTGCGGAGGTTGATA
GGTGGATTACTTTACTTATCGCTCGTGAAACTTGATGATGTTGCAGCTCG
CTCGTCACAACGGCGGTACGCGGCCCAGAAGGCCTAGCGTAATGCTACTC
CATGTTCTTGGCGTCGGCGTCGGCGTCGCAAAGCCACCCGTGGCCTGACT
GGAGCCCTAAACGGCAGTATCACAACACAAGGCCTCTTCCGGCAGGAAGG
CTGACCATGAGACTACTACTGTCCACTTTCCGTTCTTCTCCCACGCCACT
ACGCAAGTTGAGACAGAGACAGCCAGGACCAAGACGCACGACGCCGCCCA
GCGACCGTACATGAGTCATGGTCACCACCGCGGCAGAGGAAAAGCGCGCC
AAGCAGTTGCTGGAGCAGGTATGTTATCGTTGTTCCTGTATTGTGGAATG
TGAAGGCGTGGGAGACTAGACACGCGGGGGGGGGGGGGGGGGGGATCCCA
ACGTCCTTGTGTAGTATTGTGCAGTAGAAGGACAGCGGCAGTGGTTGACT
GGTTTTTTAAAAGTGATGCCTTACACCTTACATTAGTGTCCTCAGGGCCT
TACTCCCCACAATTCGATTATTCCAAATTCATTCCATACCCAACCAACCC
TCGCAGATCCGTCGCATGCCTCACAACAAACGTTGTGTTAATTGTGACAA
GGAAAGCATTGCGGGTCATAATAACGTGTGCACCAAATTTCAGACATTTG
TCTGCAACACTTGCAAAAGCGCACACCAGTCTTTCTCTCACCGGTGCAAG
AGCATCAGCCTTTCTAACTGGACCCATACCGAGGTTCATTATCTCTCAGA
CTCTGCTGGGGGTGGCAATGCTAATGCGCGCTTGACCTGGCTTGGCAAGC
TTCAGGGACACCTGAGGCTCCGGCCAGACGATCCGCTGGATAAAGTCAAA
GCATTTGTTAACGACGCATACAACCATAATCGGTACTGGAAGGAGAAGGA
GGCCGCTGGCACCAATAGTTACGTCGCCACCACAGAAAGGCCTGGATCTG
TCTCAAGTGAATTGGAGTCCGTTGCATTCACGCAGCAGCGACGGCAGCAA
CGGGAAGGCATGTTGTCCACTAGCACAACCAAATTTCCTCATGTCCGGGC
TGACACTGCTCCTACTCCTGTCGCCGCTCCAGTCGTCACGGACCTTCTTG
ACTTTTTCGGCGACTTCACTCAAGCAACGCTCCCCTCCGTGACTCCCTCC
CATCGTCCCATCGTTGATGCCAGTCATGGGACAGCTAGGCCACCTTCCGG
AGGTGCAGGCGACTTTGCCTTTCAAACTGGCAAGGGCAATTCAAACTCCG
GTATCGTGAGTAGCGCTGCCCCTCGCGCTTCCCCGTCCTACTCCCCGGTG
CCGACGGGACCCCCGCCACAAGCAGATGATTGGCAACACTTTGGACCCAC
TGTGGCTTCTTCTTCTGTGCCTGGAGATTCCACATTCTTTGCGACATCAG
CAGTGGTGCCCGCATCGAATTTTTATGACTGCACTAACGGCAGCGCATTC
GGCTTCATGAGTTCTGGGCCAAGCGCAACTCCTCACCACAATGAATTTTG
CGACTTCGCAGCTGCTTCTGTCCCTCCCTGTCCTACGGGTAGGCAACAAC
CTTTGACCTGCACTGCTCCCCCCCCGCGACCTGTCCCCCCCGCGATGAGG
CTGACTCGCCCTTTGATAGAGGATCCTTTTGAGGTCCTTGCACCGCCGCA
GCAGCCTTCCTTCTCCTCTGCTTCCTCCAATCTGTACATCCCCTCCCAGC
AGCCACACCCCTGGGGGCCCATGCCTGCGTCTGCGATGCTGTTGATGAAA
AGTGGAGATGGGTCTTTGCAAGCTAACAGAACTTCTGGTGATGGTGGCTG
TGGTTCCGGGAGGAACCCCCACCGTCCGTCTCACATGCAGACGCAACCAC
CGCGGCCTTCCGACCCACAGATGCCAATGATGACGATGAATGGTGGTGGT
GCAGCTTCTGGTCCACCTCGACGATTTTTGCCCTCCCAAGGGATGGTGGG
TGGGCCCCGCCCGCATATTCCGGTGTATGGCCAACACCAGCAGCAGCAGT
ATTCGTCGCAAGCGTCTGACCCGTTCGCAGGTCTGGATTGGCGCAAGTAG
GAGAAGAAGACACGCATTCCATCGATGAACCCTGTATGAGGTGAAGAATC
ATTAATATTAAAGCGATAACAGGGA

Coding sequence (CDS) from alignment at chr1:585070..589344-

>NO01G02250.1 ID=NO01G02250.1|Name=NO01G02250.1|organism=Nannochloropsis oceanica|type=CDS|length=1545bp|location=Sequence derived from alignment at chr1:585070..589344- (Nannochloropsis oceanica)
ATGGTCACCACCGCGGCAGAGGAAAAGCGCGCCAAGCAGTTGCTGGAGCA
GATCCGTCGCATGCCTCACAACAAACGTTGTGTTAATTGTGACAAGGAAA
GCATTGCGGGTCATAATAACGTGTGCACCAAATTTCAGACATTTGTCTGC
AACACTTGCAAAAGCGCACACCAGTCTTTCTCTCACCGGTGCAAGAGCAT
CAGCCTTTCTAACTGGACCCATACCGAGGTTCATTATCTCTCAGACTCTG
CTGGGGGTGGCAATGCTAATGCGCGCTTGACCTGGCTTGGCAAGCTTCAG
GGACACCTGAGGCTCCGGCCAGACGATCCGCTGGATAAAGTCAAAGCATT
TGTTAACGACGCATACAACCATAATCGGTACTGGAAGGAGAAGGAGGCCG
CTGGCACCAATAGTTACGTCGCCACCACAGAAAGGCCTGGATCTGTCTCA
AGTGAATTGGAGTCCGTTGCATTCACGCAGCAGCGACGGCAGCAACGGGA
AGGCATGTTGTCCACTAGCACAACCAAATTTCCTCATGTCCGGGCTGACA
CTGCTCCTACTCCTGTCGCCGCTCCAGTCGTCACGGACCTTCTTGACTTT
TTCGGCGACTTCACTCAAGCAACGCTCCCCTCCGTGACTCCCTCCCATCG
TCCCATCGTTGATGCCAGTCATGGGACAGCTAGGCCACCTTCCGGAGGTG
CAGGCGACTTTGCCTTTCAAACTGGCAAGGGCAATTCAAACTCCGGTATC
GTGAGTAGCGCTGCCCCTCGCGCTTCCCCGTCCTACTCCCCGGTGCCGAC
GGGACCCCCGCCACAAGCAGATGATTGGCAACACTTTGGACCCACTGTGG
CTTCTTCTTCTGTGCCTGGAGATTCCACATTCTTTGCGACATCAGCAGTG
GTGCCCGCATCGAATTTTTATGACTGCACTAACGGCAGCGCATTCGGCTT
CATGAGTTCTGGGCCAAGCGCAACTCCTCACCACAATGAATTTTGCGACT
TCGCAGCTGCTTCTGTCCCTCCCTGTCCTACGGGTAGGCAACAACCTTTG
ACCTGCACTGCTCCCCCCCCGCGACCTGTCCCCCCCGCGATGAGGCTGAC
TCGCCCTTTGATAGAGGATCCTTTTGAGGTCCTTGCACCGCCGCAGCAGC
CTTCCTTCTCCTCTGCTTCCTCCAATCTGTACATCCCCTCCCAGCAGCCA
CACCCCTGGGGGCCCATGCCTGCGTCTGCGATGCTGTTGATGAAAAGTGG
AGATGGGTCTTTGCAAGCTAACAGAACTTCTGGTGATGGTGGCTGTGGTT
CCGGGAGGAACCCCCACCGTCCGTCTCACATGCAGACGCAACCACCGCGG
CCTTCCGACCCACAGATGCCAATGATGACGATGAATGGTGGTGGTGCAGC
TTCTGGTCCACCTCGACGATTTTTGCCCTCCCAAGGGATGGTGGGTGGGC
CCCGCCCGCATATTCCGGTGTATGGCCAACACCAGCAGCAGCAGTATTCG
TCGCAAGCGTCTGACCCGTTCGCAGGTCTGGATTGGCGCAAGTAG

Synonyms

Publications