scaffold48, scaffold48 (supercontig) Nannochloropsis salina

Overview
Namescaffold48
Unique Namescaffold48
Typesupercontig
OrganismNannochloropsis salina (N. salina CCMP1776)
Sequence length74168
Alignment locationNSK007653:2075..2584 -
Alignment locationNSK007653t:2075..2584 -
Alignment locationNSK007654:2642..3300 -
Alignment locationNSK007654t:2642..3300 -
Alignment locationNSK007655:2690..3180 +
Alignment locationNSK007655t:2690..3180 +
Alignment locationNSK007656:5154..5576 +
Alignment locationNSK007656t:5154..5576 +
Alignment locationNSK007657:6116..8140 -
Alignment locationNSK007657t:6116..8140 -
Alignment locationNSK007658:8406..9007 -
Alignment locationNSK007658t:8406..9007 -
Alignment locationNSK007659:9063..9475 -
Alignment locationNSK007659t:9063..9475 -
Alignment locationNSK007660:10531..11472 -
Alignment locationNSK007660t:10531..11472 -
Alignment locationNSK007661:14069..14524 -
Alignment locationNSK007661t:14069..14524 -
Alignment locationNSK007662:14756..16909 -
Alignment locationNSK007662t:14756..16909 -
Alignment locationNSK007663:14906..16805 -
Alignment locationNSK007663t:14906..16805 -
Alignment locationNSK007664:17444..20302 +
Alignment locationNSK007664t:17444..20302 +
Alignment locationNSK007665:20187..20576 +
Alignment locationNSK007665t:20187..20576 +
Alignment locationNSK007666:20973..22059 +
Alignment locationNSK007666t:20973..22059 +
Alignment locationNSK007667:23197..24687 +
Alignment locationNSK007667t:23197..24687 +
Alignment locationNSK007668:24745..25461 -
Alignment locationNSK007668t:24745..25461 -
Alignment locationNSK007669:26756..30930 -
Alignment locationNSK007669t:26756..30930 -
Alignment locationNSK007670:32713..35587 -
Alignment locationNSK007670t:32713..35587 -
Alignment locationNSK007671:37156..38428 -
Alignment locationNSK007671t:37156..38428 -
Alignment locationNSK007672:38648..40572 -
Alignment locationNSK007672t:38648..40572 -
Alignment locationNSK007673:41218..41572 -
Alignment locationNSK007673t:41218..41572 -
Alignment locationNSK007674:41858..42274 -
Alignment locationNSK007674t:41858..42274 -
Alignment locationNSK007675:42506..46594 +
Alignment locationNSK007675t:42506..46594 +
Alignment locationNSK007676:47223..48011 -
Alignment locationNSK007676t:47223..48011 -
Alignment locationNSK007677:48759..49592 +
Alignment locationNSK007677t:48759..49592 +
Alignment locationNSK007678:50101..52077 -
Alignment locationNSK007678t:50101..52077 -
Alignment locationNSK007679:52299..60638 -
Alignment locationNSK007679t:52299..60638 -
Alignment locationNSK007680:61384..65391 +
Alignment locationNSK007680t:61384..65391 +
Alignment locationNSK007681:66461..67961 -
Alignment locationNSK007681t:66461..67961 -
Alignment locationNSK007682:70011..73693 +
Alignment locationNSK007682t:70011..73693 +
Alignment locationnonsR055:5155..67961 +

Link to JBrowse

Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NSK007653geneNSK007653:2075..2584 -
NSK007653tmRNANSK007653t:2075..2584 -
NSK007654geneNSK007654:2642..3300 -
NSK007654tmRNANSK007654t:2642..3300 -
NSK007655geneNSK007655:2690..3180 +
NSK007655tmRNANSK007655t:2690..3180 +
NSK007656geneNSK007656:5154..5576 +
NSK007656tmRNANSK007656t:5154..5576 +
NSK007657geneNSK007657:6116..8140 -
NSK007657tmRNANSK007657t:6116..8140 -
NSK007658geneNSK007658:8406..9007 -
NSK007658tmRNANSK007658t:8406..9007 -
NSK007659geneNSK007659:9063..9475 -
NSK007659tmRNANSK007659t:9063..9475 -
NSK007660geneNSK007660:10531..11472 -
NSK007660tmRNANSK007660t:10531..11472 -
NSK007661geneNSK007661:14069..14524 -
NSK007661tmRNANSK007661t:14069..14524 -
NSK007662geneNSK007662:14756..16909 -
NSK007662tmRNANSK007662t:14756..16909 -
NSK007663geneNSK007663:14906..16805 -
NSK007663tmRNANSK007663t:14906..16805 -
NSK007664geneNSK007664:17444..20302 +
NSK007664tmRNANSK007664t:17444..20302 +
NSK007665geneNSK007665:20187..20576 +
NSK007665tmRNANSK007665t:20187..20576 +
NSK007666geneNSK007666:20973..22059 +
NSK007666tmRNANSK007666t:20973..22059 +
NSK007667geneNSK007667:23197..24687 +
NSK007667tmRNANSK007667t:23197..24687 +
NSK007668geneNSK007668:24745..25461 -
NSK007668tmRNANSK007668t:24745..25461 -
NSK007669geneNSK007669:26756..30930 -
NSK007669tmRNANSK007669t:26756..30930 -
NSK007670geneNSK007670:32713..35587 -
NSK007670tmRNANSK007670t:32713..35587 -
NSK007671geneNSK007671:37156..38428 -
NSK007671tmRNANSK007671t:37156..38428 -
NSK007672geneNSK007672:38648..40572 -
NSK007672tmRNANSK007672t:38648..40572 -
NSK007673geneNSK007673:41218..41572 -
NSK007673tmRNANSK007673t:41218..41572 -
NSK007674geneNSK007674:41858..42274 -
NSK007674tmRNANSK007674t:41858..42274 -
NSK007675geneNSK007675:42506..46594 +
NSK007675tmRNANSK007675t:42506..46594 +
NSK007676geneNSK007676:47223..48011 -
NSK007676tmRNANSK007676t:47223..48011 -
NSK007677geneNSK007677:48759..49592 +
NSK007677tmRNANSK007677t:48759..49592 +
NSK007678geneNSK007678:50101..52077 -
NSK007678tmRNANSK007678t:50101..52077 -
NSK007679geneNSK007679:52299..60638 -
NSK007679tmRNANSK007679t:52299..60638 -
NSK007680geneNSK007680:61384..65391 +
NSK007680tmRNANSK007680t:61384..65391 +
NSK007681geneNSK007681:66461..67961 -
NSK007681tmRNANSK007681t:66461..67961 -
NSK007682geneNSK007682:70011..73693 +
NSK007682tmRNANSK007682t:70011..73693 +
nonsR055syntenic_regionnonsR055:5155..67961 +
Analyses
This supercontig is derived from or has results from the following analyses
Analysis NameDate Performed
Genome assembly for N. salina CCMP1776 (version 2)2019-10-08
Annotated Terms
Homology
Relationships
Sequences
Synonyms
Publications