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Properties
| Property Name | Value |
|---|
| Product | JAB1/Mov34/MPN/PAD-1 |
| Orig transcript id | gnl|cribi|Naga_100062g33.909.mrna |
| Orig protein id | gnl|cribi|Naga_100062g33.909 |
| Gene | EIF3f |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002467.1 | supercontig | CM002467.1:607915..609350 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna6114 ID=rna6114|Name=rna6114|organism=Nannochloropsis gaditana|type=mRNA|length=1186bp
CTCAACCAATACATGCACGAACCCATACCACGGCCAGGCTGGAGGACGAC
CACCTTTTGCAAACATGCCGGGCGGGAAACGCGACGTCCTGACTGATTTG
GCCCTGGTCACAGCCGGTGCGTCGACAGCTATCGGAGTGTATTGGGGCCT
GACCAAATTGCAGCGCCGATACTGGCGGCTGAAAGGTAAAGCAAAAGCCC
GCATTCCCTCCGCGCTCTTCAAGTCCGAATGGGCTCGTGAAATTCACATC
GCTACCCAGGCTGCTTTGAGCGCAGGGGTGAATTTGAAGGCTTGCTCGGA
GAAAGATCCCACCAGCAAGTGTGTCTCGCACAAGGGGGAGATCGATCTGG
TCACCGAGACGGACAAAGAGAACGAGCGGGAGATCGTCGCCTTACTGCGC
AAACATTTTCCCTCCTACCTCGTCATTGGGGAGGAAGAGGCCTCCGACGC
CGGCGCCATCCCTCCCTTGACTCGGGCGCCTACCTGGATCATCGACCCCA
TCGACGGCACCACCAACTTCGTGCACGGATGCCCCCTCTCCTGCGTGTCA
ATAGCCCTGGCCGTGGACAAGGCCGTCGTCGTTGGCGTCATTTACGATCC
GTTCAAAGACGAGCTCTTCTTGGCGGCCCGGGGAAGAGGCAGTTACCTTA
ACGGAAAGCCGTTGCAGACCGCGGGTGGCACCCACGAGTTACACCAGGCC
GTCATCATCCAAGAATTCGGGTACGAGCGGAGCGAGGCTGGGATTCGTAA
GCTCCTGCAGGTCTCGGAGCGTTTGCTTCGAGGAAACGTGCAGGCCTTAC
GGCAATTCGGGTCAGGAGTCTTGGATTTAGCCTACGTGGCGGCAGGGCGG
GTGGACGGCGTGTATTGCGGCGTGGCTGGGGATGGGTGGAAGCCCTGGGA
CTATGCGGCGGGCTCGTTGGTGGCGACAGAGGCGGGGGCGACCATGAGCA
CGCTTCAAGGACAGGAGTTTGACGTGTTCGGGTCCTCCATGGTCTGTGCA
GCCAACGAGTCCATTGCGCGGAAACTCGTGGGGGCGGCGAGGGAGTGAGC
AACGGGGTAAAGGGGTGGAGGGAGGGGGAGGGTGGGGTGGAGGGGAGGAG
GTGGAAGGAAGTTTCAAAGGCGAGAAGATAGGCTGGGGGGAAGGGAAGGA
AGCCGAGTCAAAGAAGTAACAAGTGAACTCTCATGC back to topprotein sequence of rna6114 >rna6114-protein ID=rna6114-protein|Name=rna6114|organism=Nannochloropsis gaditana|type=polypeptide|length=314bp
MALQGSTADALFVDSVQNVHVEVHPVVIFGILDHYNRRPEQGPGQAPGRV
IGTLLGTVVGNVVQIHNAFGVPHAENGNEVALGQDYHRTMYAQFTRINDK
ERIVGWYATTLEEGRALNSNSIIIHGFYAGNSDAAGARLVHLVVDAAVAS
GRVAIKAYVSTAVHISGAPVANIFHQVKVQVVSTAPERVCLDRMVRGQGR
EKAWSESDTFAKVLPGGGAVAAREDLEASVAALLKMLEEVIDFVDRVVAG
KVEADSAIGCELADTLSAVPRVRPELFDSIFNGNLQDLLMVSYLASLTKA
NLAISEKLSGVRHK back to topmRNA from alignment at CM002467.1:607915..609350- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >rna6114 ID=rna6114|Name=rna6114|organism=Nannochloropsis gaditana|type=mRNA|length=1436bp|location=Sequence derived from alignment at CM002467.1:607915..609350- (Nannochloropsis gaditana)
CATCAAGCAGGAAGGAAACGACGTGCGTGGTGACAATAATGTTGCAAATC
ATTGATCCATGCGTTTAATTGGCATGATTGGATTCGACAGAGCGAAAAAG
AGAGGATAGGGCGGGGCAGCCATGCATCACTTCCCAACCCAATGCCCTGG
CCGTGAACATCGGTAGAGCCACATGACCCGCCGAACATGCGCTTATACTT
TACTGTCACACTTTCACTTTTTTACATAGACAGCGTCAATCATGGCGCTG
CAGGGCTCCACGGCGGACGCCCTTTTTGTCGACAGTGTGCAAAACGTGCA
CGTGGAAGTCCACCCGGTCGTCATCTTCGGGATCCTGGACCATTACAACC
GGCGGCCGGAGCAAGGACCGGGCCAGGCGCCAGGGCGTGTGATTGGGACA
CTTCTGGGAACGGTGGTGGGGAATGTGGTGCAGATTCACAATGCCTTTGG
CGTGCCGCATGCGGAGAACGGGAATGAAGTGGCGCTGGGGCAGGACTATC
ACCGGACCATGTACGCACAATTCACCCGCATTAACGACAAGGAACGGATC
GTAGGATGGTACGCCACTACATTAGAGGAGGGTAGGGCATTGAACTCGAA
CAGTATCATCATCCATGGTTTCTATGCGGGCAATTCGGACGCAGCCGGGG
CTCGCCTGGTGCATCTGGTGGTGGACGCCGCGGTGGCCTCTGGACGGGTC
GCGATCAAAGCCTACGTCAGCACAGCAGTACATATCAGCGGGGCACCAGT
GGCGAACATCTTCCACCAGGTGAAGGTCCAGGTGGTGAGCACAGCCCCGG
AGCGCGTGTGTCTAGACCGCATGGTTCGGGGTCAGGGCCGGGAGAAAGCC
TGGTCAGAGAGCGACACTTTCGCCAAAGTGCTGCCGGGGGGGGGGGCAGT
CGCGGCCCGAGAAGATCTAGAAGCTTCTGTGGCGGCCCTCTTGAAGATGC
TGGAGGAGGTAATCGACTTTGTGGACCGGGTGGTGGCGGGGAAGGTGGAG
GCGGACAGTGCCATAGGGTGCGAGCTGGCAGACACCCTCTCAGCGGTCCC
ACGGGTGCGCCCGGAGCTCTTCGACTCAATATTCAATGGGAACCTCCAAG
ACTTGTTGATGGTGTCGTATCTGGCGAGTCTGACGAAGGCCAACTTGGCC
ATCTCGGAGAAATTGAGCGGGGTACGGCACAAATAGGGAGGGAGGGAGGG
AGGGAAGGGAAGGGTGAATGGAAGGAGGAAGTCATGGATTGCACAGGGAG
GGAGGCGATGGGGAGGAAAGGGGACCCGGGCAGTGCTCGGGAGTCATGGG
GATGTGGTGGGAGAGCCGGGCCCGGGGGCTGGCAGTGTATGGAAGGCGTG
TGGCCTGCAGGCGGTGGGGAGGGAAAATGGACGTCATAAAGTTGACACGA
ACGGCCAGGCCCGTAAAGAAACAGCGACGGCTTTAA back to topCoding sequence (CDS) from alignment at CM002467.1:607915..609350- >rna6114 ID=rna6114|Name=rna6114|organism=Nannochloropsis gaditana|type=CDS|length=945bp|location=Sequence derived from alignment at CM002467.1:607915..609350- (Nannochloropsis gaditana)
ATGGCGCTGCAGGGCTCCACGGCGGACGCCCTTTTTGTCGACAGTGTGCA
AAACGTGCACGTGGAAGTCCACCCGGTCGTCATCTTCGGGATCCTGGACC
ATTACAACCGGCGGCCGGAGCAAGGACCGGGCCAGGCGCCAGGGCGTGTG
ATTGGGACACTTCTGGGAACGGTGGTGGGGAATGTGGTGCAGATTCACAA
TGCCTTTGGCGTGCCGCATGCGGAGAACGGGAATGAAGTGGCGCTGGGGC
AGGACTATCACCGGACCATGTACGCACAATTCACCCGCATTAACGACAAG
GAACGGATCGTAGGATGGTACGCCACTACATTAGAGGAGGGTAGGGCATT
GAACTCGAACAGTATCATCATCCATGGTTTCTATGCGGGCAATTCGGACG
CAGCCGGGGCTCGCCTGGTGCATCTGGTGGTGGACGCCGCGGTGGCCTCT
GGACGGGTCGCGATCAAAGCCTACGTCAGCACAGCAGTACATATCAGCGG
GGCACCAGTGGCGAACATCTTCCACCAGGTGAAGGTCCAGGTGGTGAGCA
CAGCCCCGGAGCGCGTGTGTCTAGACCGCATGGTTCGGGGTCAGGGCCGG
GAGAAAGCCTGGTCAGAGAGCGACACTTTCGCCAAAGTGCTGCCGGGGGG
GGGGGCAGTCGCGGCCCGAGAAGATCTAGAAGCTTCTGTGGCGGCCCTCT
TGAAGATGCTGGAGGAGGTAATCGACTTTGTGGACCGGGTGGTGGCGGGG
AAGGTGGAGGCGGACAGTGCCATAGGGTGCGAGCTGGCAGACACCCTCTC
AGCGGTCCCACGGGTGCGCCCGGAGCTCTTCGACTCAATATTCAATGGGA
ACCTCCAAGACTTGTTGATGGTGTCGTATCTGGCGAGTCTGACGAAGGCC
AACTTGGCCATCTCGGAGAAATTGAGCGGGGTACGGCACAAATAG back to top
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