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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100193g5.5875.mrna |
| Orig protein id | gnl|cribi|Naga_100193g5.5875 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002455.1 | supercontig | CM002455.1:1440606..1441279 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna578 ID=rna578|Name=rna578|organism=Nannochloropsis gaditana|type=mRNA|length=1329bp
ATGCTGAAAACTACCGAGAAGAATATCTTTCGTGTCCGCGGTAGCTTCCC
CCAGGAAGGTGTGCGCTACTTCTCCCTCCAATCCAACAATGTGGACGTGG
GATTCCCCATCTCGACCATCAAGGATTACGAAATCGAAGTGGACGACCCA
GAGAATACACGCAATCCGTTTGCGGAGGACTCAGACCGACCCATCGGGAC
ATACACAATAAATGTGACGCCTCGAGGGGATCAAGGGCTAAAAAATGAGC
TCAGTCTGTGTCCGGAATCAATGACCGATCGGCAATGTAGGAGTGTAAAT
GCGGTCATGCTCATGCGTTTCTACACCTCTGACCCGGACCGTCCTCCCGT
CAGCTCCAAAACCGATCCACCCGCCAGCCAGCCCAACGATCGTTTGTTTG
GCTATGCAACACCTCCCATGGTGGAAGAGCGCCAGTTCAAATCCTGGACC
GATGACAGGTCACGCGACCGATGGCGCGTCTTCCCTACTTGCGATCAGAC
ACGTTCCACTCAAGTAACTTCCTTGATTTCCAAGCATTTTTACGGAATGA
TTCCTCCCTTCGCGCCGCCCGTCCGCCACAACAAGAACAACAACTTTGTG
CTTTACCTCGGGGAAGACACGGCGACCGCAGGGGTATACCCGAACCTGGA
CGCTGCTTATTTGCTGGCAGTGGCCTGGCAACTTTCTCCAGAGCTGAAAG
ATAAACCCAAGAAGAGATTGATGGCTCGCGTAACGGGCACCTTGCCCGTT
ACTTCCCGAAATCTTTTCACGGATCCCAAGATTGCGAATTACAAGGACGC
GGACGTCCGTTACATGTCTTTCTCCTCCATTGCCTTGGTCTCGGGAGGGC
CTACTATGGACACATTGGATGACGCCGCCTTTTTGCGTTTCTACGAGCCC
CAGCAACCGGAAGGAGAGGCATGGAACCGCTCCTACTCCTTCGTCGCAGC
CGAGGACCCAGAGCGGACCTGCGGGTTGTATAATGCCTCGCAGGAGTTGT
TCTTGTCCACCGTCCTCGACGGAAAGCTCCAGGACTACTGGGGCATCCTC
GACCGACAACTCATCCCCAAAACGCAACGAACCCGTCTGCCCGACCGCTC
GAACGGATACGCTCGCTTGCAATGTGCGGATGCGTCGGCCTTGGATGCTT
GTGTGGACCCGGACTATCTTAAAAATGTCATGGAGGACTACTACCCTCGC
ATTCAGTGGTACACTTGTGACCAGGACGGGACATTGGAGGAGATCACGGA
TTACCTGGGCGCAATCCCGGTGAGCGAGACGTTGACCAACAAGCAGAAGA
CACACAATGGAGGTGTTGGCTCCAACTAA back to topprotein sequence of rna578 >rna578-protein ID=rna578-protein|Name=rna578|organism=Nannochloropsis gaditana|type=polypeptide|length=185bp
MTSRGGSGVWRKHVTVIERERRRDAKREMCSLLKKDEGEGKRESSSSLRW
CDTKAAHVWIQARRLTYANPFLFLVCYFFCLKFFLPKEEAVKGGENEGQV
YLFFKAGVGARWYLKRMGYVCYFVCRSKSSLKHGKDEAGSSPNKPQENPR
KLISIASDKKQDRKRTPAYFPYLFRNPTPPFLQIL back to topmRNA from alignment at CM002455.1:1440606..1441279+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna578 ID=rna578|Name=rna578|organism=Nannochloropsis gaditana|type=mRNA|length=674bp|location=Sequence derived from alignment at CM002455.1:1440606..1441279+ (Nannochloropsis gaditana)
ATGACgagtcggggagggagcggggttTGGAGGAAGCACGTgtcaagggg
ggaggaagggagattggcgagagaggacgagtgagagggagtgggagaga
cGACGAAAAGGACTGTGatcgaaagagaaaggaggcgtgACGCGAAGAGA
GAGATGTGTTCGTTATTGAAAaaggatgaaggagaggggaagcgagaATC
ATCGAGTTCTTTGAGATGGTGTGATACCAAAGCAGCCCATGTTTGGATTC
AGGCTCGCCGGCTTACCTACGCCaatccctttctctttctcgtctgCTAC
TTTTTTTGCTTGAAATTTTTCCTACCTAAGGAAGAAGCAGTGAAGGGCGG
CGAAAACGAGGGACAAGTCCGcgcaagggggagaagaaaatggtGAACGC
TGCATGTGTGGAGGTGTATTTATTTTTTAAGGCTGGAGTAGGTGCTCGGT
GGTAtttgaagaggatgggaTACGTTTGCTACTTCGTCTGTCGCTCCAAA
AGTAGTCTTAAGCACGGGAAGGATGAGGCGGGTTCGTCCCCAAATAAGCC
ACAAGAGAACCCTAGAAAACTAATTTCAATAGCGTCCGATAAGAAACAGG
ACCGAAAAAGAACTCCCGCATATTTCCCCTATCTTTTCAGAAACCCAACG
CCACCATTTTTACAGATTCTATGA back to topCoding sequence (CDS) from alignment at CM002455.1:1440606..1441279+ >rna578 ID=rna578|Name=rna578|organism=Nannochloropsis gaditana|type=CDS|length=1674bp|location=Sequence derived from alignment at CM002455.1:1440606..1441279+ (Nannochloropsis gaditana)
ATGACgagtcggggagggagcggggttTGGAGGAAGCACGTGACTGTGat
cgaaagagaaaggaggcgtgACGCGAAGAGAGAGATGTGTTCGTTATTGA
AAaaggatgaaggagaggggaagcgagaATCATCGAGTTCTTTGAGATGG
TGTGATACCAAAGCAGCCCATGTTTGGATTCAGGCTCGCCGGCTTACCTA
CGCCaatccctttctctttctcgtctgCTACTTTTTTTGCTTGAAATTTT
TCCTACCTAAGGAAGAAGCAGTGAAGGGCGGCGAAAACGAGGGACAAGTG
TATTTATTTTTTAAGGCTGGAGTAGGTGCTCGGTGGTAtttgaagaggat
gggaTACGTTTGCTACTTCGTCTGTCGCTCCAAAAGTAGTCTTAAGCACG
GGAAGGATGAGGCGGGTTCGTCCCCAAATAAGCCACAAGAGAACCCTAGA
AAACTAATTTCAATAGCGTCCGATAAGAAACAGGACCGAAAAAGAACTCC
CGCATATTTCCCCTATCTTTTCAGAAACCCAACGCCACCATTTTTACAGA
TTCTATGAATGACgagtcggggagggagcggggttTGGAGGAAGCACGTG
ACTGTGatcgaaagagaaaggaggcgtgACGCGAAGAGAGAGATGTGTTC
GTTATTGAAAaaggatgaaggagaggggaagcgagaATCATCGAGTTCTT
TGAGATGGTGTGATACCAAAGCAGCCCATGTTTGGATTCAGGCTCGCCGG
CTTACCTACGCCaatccctttctctttctcgtctgCTACTTTTTTTGCTT
GAAATTTTTCCTACCTAAGGAAGAAGCAGTGAAGGGCGGCGAAAACGAGG
GACAAGTGTATTTATTTTTTAAGGCTGGAGTAGGTGCTCGGTGGTAtttg
aagaggatgggaTACGTTTGCTACTTCGTCTGTCGCTCCAAAAGTAGTCT
TAAGCACGGGAAGGATGAGGCGGGTTCGTCCCCAAATAAGCCACAAGAGA
ACCCTAGAAAACTAATTTCAATAGCGTCCGATAAGAAACAGGACCGAAAA
AGAACTCCCGCATATTTCCCCTATCTTTTCAGAAACCCAACGCCACCATT
TTTACAGATTCTATGAATGACgagtcggggagggagcggggttTGGAGGA
AGCACGTGACTGTGatcgaaagagaaaggaggcgtgACGCGAAGAGAGAG
ATGTGTTCGTTATTGAAAaaggatgaaggagaggggaagcgagaATCATC
GAGTTCTTTGAGATGGTGTGATACCAAAGCAGCCCATGTTTGGATTCAGG
CTCGCCGGCTTACCTACGCCaatccctttctctttctcgtctgCTACTTT
TTTTGCTTGAAATTTTTCCTACCTAAGGAAGAAGCAGTGAAGGGCGGCGA
AAACGAGGGACAAGTGTATTTATTTTTTAAGGCTGGAGTAGGTGCTCGGT
GGTAtttgaagaggatgggaTACGTTTGCTACTTCGTCTGTCGCTCCAAA
AGTAGTCTTAAGCACGGGAAGGATGAGGCGGGTTCGTCCCCAAATAAGCC
ACAAGAGAACCCTAGAAAACTAATTTCAATAGCGTCCGATAAGAAACAGG
ACCGAAAAAGAACTCCCGCATATTTCCCCTATCTTTTCAGAAACCCAACG
CCACCATTTTTACAGATTCTATGA back to top
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