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Properties
Property Name | Value |
Product | hypothetical protein |
Orig transcript id | gnl|cribi|Naga_100015g16.6358.mrna |
Orig protein id | gnl|cribi|Naga_100015g16.6358 |
Gbkey | mRNA |
Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
CM002460.1 | supercontig | CM002460.1:829422..830732 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna3141 ID=rna3141|Name=rna3141|organism=Nannochloropsis gaditana|type=mRNA|length=1395bp ATGGACGAGTTGATGACAGGCAGCAAAAGACGACGGCATGCTTCTTCAGC GCGACATCAGCAACTTAATCATCTAGCGGATGGGACAGAGGGAGGGGCGG GCCCCCACCAATACAGGGGGGCTTCCGAGAACGCCTCTGTGACGTCCGAA AGCAGCAAAGCGAAGAAGCGCTTCGTGTGGCCTGACGACTTGCACCGGGA CTTCGTAGCCGCCATCTTCGACGTGGGCCTGAAATGTGCTTCTCCCAAGA CGATCATGGAAATGATGAGCAACACGAAAGAGTTAACCCCGGATCACATT AAGAGCCACTTGCAAAAGTATCGCTTGCACAGGGAGCGAGCGCGAGAGGA ATTTTTGCAGCACTTCGGAAAGAACCCTTTCGTCGCAGGGGCAGCAGGGA CAGGACTCGTGTGTGCGAAGGGCGAAGCGGGGGGGGTATCGAGGGACGGC TCCGCGTCCTCCTTGGATAGCGTGAACGGCATCGGTGGAAGGGCGGAAAT GGACCACCAGGGCGACGAAGACGCGTTCCGAGGACAATTGAACCTCATCC GAGATTGTATACAAATGCAAGCCGGCTTCCAATCCGTTCTCCGTCAAGCC TTGATGCAGCAGACTCAATTACAGCAGCAGCTACAGGCCCATCTACAAGC TTTGGGTTTTGACGGACCGTCCGCCCGAATGGCCGCCGCAGCGGGAGCGC GGGAGGCGTTGGGAAGCGCGGCGGTGCCGTCATCCCCCTCTGCAGGGCCT CTGTCGATACCGGTGACGGCGGAAGGGAAGGCGGGCGGCAGCGACGAGGC TCAGTACCACTATCAATACGAAGGGCACTCCCAGGGGCAGCCGCACTCGC CTGCGCAGGCTCACGTTAACCAACAGCAGCAGGCGCAAGTGAGGCGCCCG AACACTGGGAGCGGAGGACACATGTCGCTCCCAGGCGGTGGGAAACGGTC GGCAGAGGAGCTGATGCAGGAGGAAATGCGCGAGCATATGGACATGCACC GGCAGTTGGTGCTGCGAAAAAATGCGCAAATATCGCAGTACGAGGACGGG GCAAAAATGGCGGCAGCGGCAGCGGCAGCCGTCCAAGGATTGTCGGGGGG ACCGGTGTCTGGCGCTGGGCTACCCGCGTCGTACTTGGGCGTTTCTGGGG GCGGTGGCAACGGTATGGCCCATCCAGGGATGACGGAAAACGTCCCTGTC GCCCCCCACCTTCCCGCTAGCGCCAGCGTGGCCTCTTCAGGCATGGGGCT TGCTGGTCCGACACCTGTGGCGCCGGGGGGAATGATCACGGGAGGACATC CTGGCTTGGACCTGGAAGTAGATCTAGCCTCCTTCCGGTGGAACGAGGAC GAGGATAACCTGTTTAGTTTTTTGATGGACCATCCCGTGGGATGA back to topprotein sequence of rna3141 >rna3141-protein ID=rna3141-protein|Name=rna3141|organism=Nannochloropsis gaditana|type=polypeptide|length=256bp MTMKFLKLCTSKIKSEPSKFQALHRGLVQSFGSTKTAPLDPQIESNTWCK QADPEMAIWAAPIIHDILELYHCRVHDPRVYNRYAPDAVFDDPAGILRGR PAIRVAMEALPKIFRTGEPKDVHITYHAPLVGGERNGFRNGDEHKGQEQV GPQARIALVQTYVWRQDILPLSLSPGVLLGQGNSTSVELPTVVFLTFDAK THLITRHEDRWWGKDTTTSSPHLRPVHSIIKQLNGRAWEVWGARCYGNIR HNEERK back to topmRNA from alignment at CM002460.1:829422..830732- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna3141 ID=rna3141|Name=rna3141|organism=Nannochloropsis gaditana|type=mRNA|length=1311bp|location=Sequence derived from alignment at CM002460.1:829422..830732- (Nannochloropsis gaditana) ATGACAATGAAATTCTTGAAGTTGTGCACGAGCAAGATTAAGTCAGAACC
TTCGAAATTTCAAGCTCTCCATCGGGGTCTTGTTCAATCGTTTGGAAGCA
CAAAAACGGCGCCCTTAGACCCTCAAATCGAAAGTAACACCTGGTGCAAG
CAAGCCGACCCGGAGATGGCCATTTGGGCCGCCCCCATAATTCATGATGT
ACGTAGGACATCGATGAAGCTTCATGATGTTGATACAAATACAGGACACT
TATATGGATTTCAACTTTCCTTCCATCCTCAAGATCCTAGAATTGTACCA
TTGCCGCGTTCATGATCCTCGAGTCTACAACCGGTATGCTCCCGACGCTG
TTTTTGACGATCCTGCCGGAATACTGCGAGGAAGACCAGCCATTCGAGTA
GCCATGGAAGCATTGGTAGGACACATTTCTTCCTTAAATGTGGAAATGAC
ATCGCGATTGAAGTTGTGAATCAGCGCCATCCTCTTGTTTCTTGGCTCGC
CAATGATGCAATAGTCTGAAAAGAATAATTGCGATAGCCATATCTATGCG
TCTCACTCGTTGAAGTAAGGCTTTCAGCGGGAGCATGGTAACCGAAAGAT
ACATGTGAGAGCAGCAATACCATTTCAGGGACACTGCTCCGGATTCATAA
TCCCATCAAGCAGGCGCGGAGGACTGTGTCGATGTTTACTTGTCATGCTC
AGGATACTTTTAGGAGGGATGAAGCACAGACATTGTCGCACATTTATTTA
AGAAACATGATTATCGCTTTCACACACGCACAATCAGCCTAAGATTTTCC
GCACCGGGGAACCCAAAGACGTCCATATCACTTATCATGCTCCCTTGGTT
GGAGGGGAACGCAACGGGTTTCGAAATGGCGACGAGCACAAAGGACAGGA
GCAGGTAAAGAATAGGCAAGCTGACGTAACAAAAGATCTCCTGGGACAGA
ATTTTTCTAAATGGTGCATGTTTCCTTCTCAACTTAGGTCGGCCCGCAGG
CCCGCATTGCCCTTGTGCAAACCTACGTTTGGCGGCAAGACATTCTGCCC
CTTTCATTATCTCCTGGTGTGCTTTTGGGACAGGGCAACTCGACTTCTGT
CGAACTGCCGACAGTCGTTTTTCTGACTTTTGATGCCAAGACCCACCTCA
TCACCCGGCATGAAGATCGATGGTGGGGAAAAGATACTACTACATCGTCC
CCACACCTGCGCCCCGTGCACAGCATAATCAAACAGCTGAACGGGAGAGC
TTGGGAAGTGTGGGGTGCACGGTGCTACGGTAATATCCGTCATAACGAAG
AAAGAAAATAG back to topCoding sequence (CDS) from alignment at CM002460.1:829422..830732- >rna3141 ID=rna3141|Name=rna3141|organism=Nannochloropsis gaditana|type=CDS|length=3084bp|location=Sequence derived from alignment at CM002460.1:829422..830732- (Nannochloropsis gaditana) GTCGGCCCGCAGGCCCGCATTGCCCTTGTGCAAACCTACGTTTGGCGGCA AGACATTCTGCCCCTTTCATTATCTCCTGGTGTGCTTTTGGGACAGGGCA ACTCGACTTCTGTCGAACTGCCGACAGTCGTTTTTCTGACTTTTGATGCC AAGACCCACCTCATCACCCGGCATGAAGATCGATGGTGGGGAAAAGATAC TACTACATCGTCCCCACACCTGCGCCCCGTGCACAGCATAATCAAACAGC TGAACGGGAGAGCTTGGGAAGTGTGGGGTGCACGGTGCTACGGTAATATC CGTCATAACGAAGAAAGAAAATAGCCTAAGATTTTCCGCACCGGGGAACC CAAAGACGTCCATATCACTTATCATGCTCCCTTGGTTGGAGGGGAACGCA ACGGGTTTCGAAATGGCGACGAGCACAAAGGACAGGAGCAGATCCTAGAA TTGTACCATTGCCGCGTTCATGATCCTCGAGTCTACAACCGGTATGCTCC CGACGCTGTTTTTGACGATCCTGCCGGAATACTGCGAGGAAGACCAGCCA TTCGAGTAGCCATGGAAGCATTGATGACAATGAAATTCTTGAAGTTGTGC ACGAGCAAGATTAAGTCAGAACCTTCGAAATTTCAAGCTCTCCATCGGGG TCTTGTTCAATCGTTTGGAAGCACAAAAACGGCGCCCTTAGACCCTCAAA TCGAAAGTAACACCTGGTGCAAGCAAGCCGACCCGGAGATGGCCATTTGG GCCGCCCCCATAATTCATGATGTCGGCCCGCAGGCCCGCATTGCCCTTGT GCAAACCTACGTTTGGCGGCAAGACATTCTGCCCCTTTCATTATCTCCTG GTGTGCTTTTGGGACAGGGCAACTCGACTTCTGTCGAACTGCCGACAGTC GTTTTTCTGACTTTTGATGCCAAGACCCACCTCATCACCCGGCATGAAGA TCGATGGTGGGGAAAAGATACTACTACATCGTCCCCACACCTGCGCCCCG TGCACAGCATAATCAAACAGCTGAACGGGAGAGCTTGGGAAGTGTGGGGT GCACGGTGCTACGGTAATATCCGTCATAACGAAGAAAGAAAATAGCCTAA GATTTTCCGCACCGGGGAACCCAAAGACGTCCATATCACTTATCATGCTC CCTTGGTTGGAGGGGAACGCAACGGGTTTCGAAATGGCGACGAGCACAAA GGACAGGAGCAGATCCTAGAATTGTACCATTGCCGCGTTCATGATCCTCG AGTCTACAACCGGTATGCTCCCGACGCTGTTTTTGACGATCCTGCCGGAA TACTGCGAGGAAGACCAGCCATTCGAGTAGCCATGGAAGCATTGATGACA ATGAAATTCTTGAAGTTGTGCACGAGCAAGATTAAGTCAGAACCTTCGAA ATTTCAAGCTCTCCATCGGGGTCTTGTTCAATCGTTTGGAAGCACAAAAA CGGCGCCCTTAGACCCTCAAATCGAAAGTAACACCTGGTGCAAGCAAGCC GACCCGGAGATGGCCATTTGGGCCGCCCCCATAATTCATGATGTCGGCCC GCAGGCCCGCATTGCCCTTGTGCAAACCTACGTTTGGCGGCAAGACATTC TGCCCCTTTCATTATCTCCTGGTGTGCTTTTGGGACAGGGCAACTCGACT TCTGTCGAACTGCCGACAGTCGTTTTTCTGACTTTTGATGCCAAGACCCA CCTCATCACCCGGCATGAAGATCGATGGTGGGGAAAAGATACTACTACAT CGTCCCCACACCTGCGCCCCGTGCACAGCATAATCAAACAGCTGAACGGG AGAGCTTGGGAAGTGTGGGGTGCACGGTGCTACGGTAATATCCGTCATAA CGAAGAAAGAAAATAGCCTAAGATTTTCCGCACCGGGGAACCCAAAGACG TCCATATCACTTATCATGCTCCCTTGGTTGGAGGGGAACGCAACGGGTTT CGAAATGGCGACGAGCACAAAGGACAGGAGCAGATCCTAGAATTGTACCA TTGCCGCGTTCATGATCCTCGAGTCTACAACCGGTATGCTCCCGACGCTG TTTTTGACGATCCTGCCGGAATACTGCGAGGAAGACCAGCCATTCGAGTA GCCATGGAAGCATTGATGACAATGAAATTCTTGAAGTTGTGCACGAGCAA GATTAAGTCAGAACCTTCGAAATTTCAAGCTCTCCATCGGGGTCTTGTTC AATCGTTTGGAAGCACAAAAACGGCGCCCTTAGACCCTCAAATCGAAAGT AACACCTGGTGCAAGCAAGCCGACCCGGAGATGGCCATTTGGGCCGCCCC CATAATTCATGATGTCGGCCCGCAGGCCCGCATTGCCCTTGTGCAAACCT ACGTTTGGCGGCAAGACATTCTGCCCCTTTCATTATCTCCTGGTGTGCTT TTGGGACAGGGCAACTCGACTTCTGTCGAACTGCCGACAGTCGTTTTTCT GACTTTTGATGCCAAGACCCACCTCATCACCCGGCATGAAGATCGATGGT GGGGAAAAGATACTACTACATCGTCCCCACACCTGCGCCCCGTGCACAGC ATAATCAAACAGCTGAACGGGAGAGCTTGGGAAGTGTGGGGTGCACGGTG CTACGGTAATATCCGTCATAACGAAGAAAGAAAATAGCCTAAGATTTTCC GCACCGGGGAACCCAAAGACGTCCATATCACTTATCATGCTCCCTTGGTT GGAGGGGAACGCAACGGGTTTCGAAATGGCGACGAGCACAAAGGACAGGA GCAGATCCTAGAATTGTACCATTGCCGCGTTCATGATCCTCGAGTCTACA ACCGGTATGCTCCCGACGCTGTTTTTGACGATCCTGCCGGAATACTGCGA GGAAGACCAGCCATTCGAGTAGCCATGGAAGCATTGATGACAATGAAATT CTTGAAGTTGTGCACGAGCAAGATTAAGTCAGAACCTTCGAAATTTCAAG CTCTCCATCGGGGTCTTGTTCAATCGTTTGGAAGCACAAAAACGGCGCCC TTAGACCCTCAAATCGAAAGTAACACCTGGTGCAAGCAAGCCGACCCGGA GATGGCCATTTGGGCCGCCCCCATAATTCATGAT back to top
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