|
Properties
Property Name | Value |
Product | hypothetical protein |
Orig transcript id | gnl|cribi|Naga_100288g5.9958.mrna |
Orig protein id | gnl|cribi|Naga_100288g5.9958 |
Gbkey | mRNA |
Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
CM002459.1 | supercontig | CM002459.1:1234518..1235383 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna2794 ID=rna2794|Name=rna2794|organism=Nannochloropsis gaditana|type=mRNA|length=842bp GCAGCTTGACCTTGAAGCCGTAGCGCCCTCAGAAGAGCGTGGGCCGGTGG TAACAGATGAGGTATCCGCAGAGCGAGGTGTTAAATCGTCCAGCGATCTC GCGCAAGACCGTTGGCGGGAAGCCGATGTCGAAGATAGAGACGTGCGTGA AGGGGTCCAGCGTTCGGGTTTCCGTCACGTCGCCGTTTAGGATGAAGATT TTGTGGTTAATGCGGTTTGCTCCCGCGACCATGCCTGGTGCTGCCCGGGA TGCCTGCATCTGCCTCCGCGTCCACCGCTGCGGCTGCCTGGGCCTATCGT TATTGATCTGCTCCAGCAAGCTCTTGATTGAGCTCTGGCCGATCAAGTTC AAGCCTGGCTTGAAGAGCGGGTCCACAAGCCTCCGGGCGGGCGGTGCGGG GAGGGGGTTGGCGCGTTTGTAGAAGTAGGCCCTGTGGCCCTCTCTGGAAC CGTGCATTGACGTCTTGATCTGCGTGAGCAGGCTGACGTCGAATCCGTAG CGCTCGGCGATGAGCTTGGGTCGGTGGTAGCAGATCAGGAAGGGGTAGTG GGAGGCGTTGAACGGGCCCGCGATCTCGTAGAAGAGCGGGGGGAGTGCTA TTATCACGTTCTACTACCTTGATATGCATGCCGGAGACGGAGCATATTAC GCGAAGGCCATTGAAGCAAACACCGATTAATGCGGATAAGGAGCCGTTGG ATAAGAGTGCGCGAAATTTGATCTTGGCGAGATGTGTTTCAAGGATGGTT GTGGAGGATCTTACAGGAGACATGTACAGGGAGCTTCTACAGTATCTCGG AAGTTCCTGCAAGAAAGAATAAGAATGAATACGACGAAAATA back to topprotein sequence of rna2794 >rna2794-protein ID=rna2794-protein|Name=rna2794|organism=Nannochloropsis gaditana|type=polypeptide|length=255bp MDDTGNTTSQSHTPSDPPASPSGSETALSLPSQKPKLVVLHPPTSSEPST AAADTLQGGPMPLLKVAKTATNDVTNAAAEGGKKGEEIPKLKIASFARPL AGSSVKPSTSTSSIPIKLTVVAPPPAGTSRPVSSVGAETAARNDASGNPP GGREGGRGQSAAIYPLASEASMPPPGRPAKEEMRENVKAEEVEEEDDPDV MDAEEGEGLEDAEMAQAVAGEEPVLLQEEGAVEAYAEARSEQQKQLEELK LKARI back to topmRNA from alignment at CM002459.1:1234518..1235383+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna2794 ID=rna2794|Name=rna2794|organism=Nannochloropsis gaditana|type=mRNA|length=866bp|location=Sequence derived from alignment at CM002459.1:1234518..1235383+ (Nannochloropsis gaditana) ATGGATGACACTGGCAACACAACCTCACAAAGTCACACGCCTTCTGATCC
ACCGGCTTCTCCATCTGGTTCAGAAACAGCGCTGTCGTTACCCTCGCAAA
AGCCGAAGCTAGTGGTGCTACATCCTCCTACTTCGTCTGAACCCAGTACT
GCGGCAGCAGACACATTGCAGGGCGGTCCCATGCCCTTACTGAAGGTGGC
CAAGACAGCGACCAACGACGTAACCAACGCagccgcggagggagggaaga
aaggagaagaaatacCTAAACTGAAAATCGCGTCgttcgcccgccccctt
gcCGGATCCTCTGTCAAGCCTTCCACGTCGACATCATCCATTCCCATCAA
ACTGACGGTGGTGGCACCGCCCCCCGCTGGAACATCCCGTCCCGTGTCCT
CAGTTGGGGCGGAGACTGCGGCTCGTAATGACGCGTCGGGAAACCCCCCA
GGAGGTCGTGAGGGCGGTCGGGGTCAAAGCGCAGCCATTTATCCACTGGC
CTCGGAGGCGAGCATGCCTCCGCCGGGGAGACCtgcaaaagaagaaatgc
gagagaacgtgaaggcggaggaagtggaggaggaggatgatccGGACGTG
ATGGAtgcggaagagggagaaggtttGGAGGACGCAGAAATGGCGCAGGC
ggtggcaggggaggagcccgtgctgctgcaggaggagggggcggtagAGG
CGTATGCCGAGGCGCGCTCGGAGCAACAGAAACAGCTGGAGGAATTGAAA
CTCaaggtgaggagaggggggagaggggagggagggagggagggagagag
agcagTTGAGGAGGTTTGTAGGGCCGATTCCTTGTCCTGCTCCATATATG
CCAGGCGCGGATCTAG back to topCoding sequence (CDS) from alignment at CM002459.1:1234518..1235383+ >rna2794 ID=rna2794|Name=rna2794|organism=Nannochloropsis gaditana|type=CDS|length=1536bp|location=Sequence derived from alignment at CM002459.1:1234518..1235383+ (Nannochloropsis gaditana) ATGGATGACACTGGCAACACAACCTCACAAAGTCACACGCCTTCTGATCC ACCGGCTTCTCCATCTGGTTCAGAAACAGCGCTGTCGTTACCCTCGCAAA AGCCGAAGCTAGTGGTGCTACATCCTCCTACTTCGTCTGAACCCAGTACT GCGGCAGCAGACACATTGCAGGGCGGTCCCATGCCCTTACTGAAGGTGGC CAAGACAGCGACCAACGACGTAACCAACGCagccgcggagggagggaaga aaggagaagaaatacCTAAACTGAAAATCGCGTCgttcgcccgccccctt gcCGGATCCTCTGTCAAGCCTTCCACGTCGACATCATCCATTCCCATCAA ACTGACGGTGGTGGCACCGCCCCCCGCTGGAACATCCCGTCCCGTGTCCT CAGTTGGGGCGGAGACTGCGGCTCGTAATGACGCGTCGGGAAACCCCCCA GGAGGTCGTGAGGGCGGTCGGGGTCAAAGCGCAGCCATTTATCCACTGGC CTCGGAGGCGAGCATGCCTCCGCCGGGGAGACCtgcaaaagaagaaatgc gagagaacgtgaaggcggaggaagtggaggaggaggatgatccGGACGTG ATGGAtgcggaagagggagaaggtttGGAGGACGCAGAAATGGCGCAGGC ggtggcaggggaggagcccgtgctgctgcaggaggagggggcggtagAGG CGTATGCCGAGGCGCGCTCGGAGCAACAGAAACAGCTGGAGGAATTGAAA CTCaagGCGCGGATCTAGATGGATGACACTGGCAACACAACCTCACAAAG TCACACGCCTTCTGATCCACCGGCTTCTCCATCTGGTTCAGAAACAGCGC TGTCGTTACCCTCGCAAAAGCCGAAGCTAGTGGTGCTACATCCTCCTACT TCGTCTGAACCCAGTACTGCGGCAGCAGACACATTGCAGGGCGGTCCCAT GCCCTTACTGAAGGTGGCCAAGACAGCGACCAACGACGTAACCAACGCag ccgcggagggagggaagaaaggagaagaaatacCTAAACTGAAAATCGCG TCgttcgcccgcccccttgcCGGATCCTCTGTCAAGCCTTCCACGTCGAC ATCATCCATTCCCATCAAACTGACGGTGGTGGCACCGCCCCCCGCTGGAA CATCCCGTCCCGTGTCCTCAGTTGGGGCGGAGACTGCGGCTCGTAATGAC GCGTCGGGAAACCCCCCAGGAGGTCGTGAGGGCGGTCGGGGTCAAAGCGC AGCCATTTATCCACTGGCCTCGGAGGCGAGCATGCCTCCGCCGGGGAGAC Ctgcaaaagaagaaatgcgagagaacgtgaaggcggaggaagtggaggag gaggatgatccGGACGTGATGGAtgcggaagagggagaaggtttGGAGGA CGCAGAAATGGCGCAGGCggtggcaggggaggagcccgtgctgctgcagg aggagggggcggtagAGGCGTATGCCGAGGCGCGCTCGGAGCAACAGAAA CAGCTGGAGGAATTGAAACTCaagGCGCGGATCTAG back to top
|