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Properties
| Property Name | Value |
|---|
| TranscriptId | 181531 |
| Track | FilteredModels2 |
| ProteinId | 181445 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_22 | supercontig | scaffold_22:379488..381756 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_7999 ID=mRNA_7999|Name=jgi.p|Nanoce1779_2|181445|organism=Nannochloropsis oceanica|type=mRNA|length=1112bp
GTCACTCCCCGGCGTACAGGTCCTCTGCTTGTTAAACCAAACGCGAAAAA
ACAAGCACGGAATGATCACGGCGCTGGTGCTGCTGCCAAAGCAATCAGAA
TGGCACCTCAAGCATACCATTTGATGGCTGGAAACTTCTTCCCTCCCCGT
GTCCTCTCAATTTTCCTCCCTCTATCTCATCTTGCATAGACCGGGCCGCA
AGCCGCATTTAACATGAGCTACGCGTACCTATTTAAGAGCATCGTGATAG
GGGACAGTGGTTCTCCCTCCCTCCCTCCTCTCCCTCCCTCCTCTCCCTCA
GGCGTGGGCAAGTCCTGCCTCCTCCTACAATTCACAGACAAACGCTTCGT
TCAAGTCCACGACTTGACCATTGGTGTGGAATTCGGTGCTCGCATGGTGC
ACATCGACGGCAAGGCTATTAAGTTACAGATCTGGGACACAGCCGGCCAA
GAATCCTTCCGTTCGATCACCCGCTCTTACTACCGCGGTGCCGCCGGTGC
CCTCCTTGTGTACGACATAACACGCCGAGAGACGTTCAACCACCTCTCTC
GCTGGCTCGAAGAAGCCAAGCTCTACTCGTCCCCCAACATGGTCATCATG
CTGGTGGGCAACAAAAGCGACGCAGAGGCCCGCCGCGCCGTCTCCACCCT
GGAAGGGCAAGCGTTCGCTGACGAGCACGGGCTGCTATTCTTGGAAACGA
GTGCTCGGACCGGACAAAACGTCGAGGCGGCCTTCAGCAGCACGGCAGAG
AAAATCTACGACAACATTCTCAGGGGTATATATGACCCCAACAACGATAC
CCACGGCATAAAAGTCGGCGCACCAGGGGCAGGGCAAGGAGCACAAGGGA
AGGGGGGAGGGCGGGTGGGAGGGCGGGAGGGTGCAGGGGCAGGCTCTAGA
AGTGGGTGTTGTTAGTAATTTGCCGTAAATGAAAATGTCCCGTGTAAATA
AGACGTCAAGATAAAGGAGGCAATTGCTATTCCCCCATCGTCGAAGCTCG
AGGGAGAAAGGGAAGGCGGAAAGGAGGGAAGAAGGGCGGAAGGGGGGGAA
TGAGGGAGAGAAAAGGAATCTTGAAGAAAGAAGAGTACCTCGGCAGGGTG
TACATGATTTAT back to topprotein sequence of jgi.p|Nanoce1779_2|181445 >mRNA_7999-protein ID=mRNA_7999-protein|Name=jgi.p|Nanoce1779_2|181445|organism=Nannochloropsis oceanica|type=polypeptide|length=234bp
MSYAYLFKSIVIGDSGSPSLPPLPPSSPSGVGKSCLLLQFTDKRFVQVHD
LTIGVEFGARMVHIDGKAIKLQIWDTAGQESFRSITRSYYRGAAGALLVY
DITRRETFNHLSRWLEEAKLYSSPNMVIMLVGNKSDAEARRAVSTLEGQA
FADEHGLLFLETSARTGQNVEAAFSSTAEKIYDNILRGIYDPNNDTHGIK
VGAPGAGQGAQGKGGGRVGGREGAGAGSRSGCC* back to topmRNA from alignment at scaffold_22:379488..381756- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_7999 ID=mRNA_7999|Name=jgi.p|Nanoce1779_2|181445|organism=Nannochloropsis oceanica|type=mRNA|length=2269bp|location=Sequence derived from alignment at scaffold_22:379488..381756- (Nannochloropsis oceanica)
GTCACTCCCCGGCGTACAGGTCCTCTGCTTGTTAAACCAAACGCGAAAAA
ACAAGCACGGAATGATCACGGCGCTGGTGCTGCTGCCAAAGCAATCAGAA
TGGCACCTCAAGCATACCATTTGATGGCTGGAAACTTCTTCCCTCCCCGT
GTCCTCTCAATTTTCCTCCCTCTATCTCATCTTGCATAGACCGGGCCGCA
AGCCGCATTTAACATGAGCTACGCGTACCTATTTAAGAGCATCGTGATAG
GGGACAGTGGTTCGTTCGCTTCGAGGGAGGAAGGGAGGGAAAAGGGAAGG
GAGAAGGGGAAAAGAAGGAGAAAGAAAGATGGAGAGAAGGAGAGTCTTGT
CATGATTCCATTTTGATACTTTAGTCATTCTCCAGCCTATTTATGACAAA
TCTCAATCTGTACCCTTACCCTTCCTTCCTTCCCTCCCTCCCTCCCTCCT
CTCCCTCCCTCCTCTCCCTCAGGCGTGGGCAAGTCCTGCCTCCTCCTACA
ATTCACAGACAAACGCTTCGTTCAAGTCCACGACTTGACCATTGGTAGGT
GGGTAATGCGAGGGGAAGGGCTGGAGAGAGGGATGCAAGGGATAAAATAG
GTATGGCAAGATCAACCTTCCATCCCAATCAATTCCTGGCCCCGTGCTCA
ACCTCCCTCCCTCCCTCCGTCCCTCCGTCCCTTCCTCCCTCCCTCCCTTC
CTCCCTTCCTGCAGGTGTGGAATTCGGTGCTCGCATGGTGCACATCGACG
GCAAGGCTATTAAGTTACAGATCTGGGACACAGCCGGCCAAGAATCCTTC
CGTTCGATCACCCGCTCTTACTACCGCGGGTACGTGCCCTCCCTCCCGCC
CTCCCTCCCTCCCTCCTTCCCTCTTTTCCTCCTTTTGCCCTCTGGTTCTT
TCCATGACGCCCAGAAGGCCGGCCCTCCCTCCTCTCTCCCTCCCTCCCTC
CCTCCCTCCCTCCCTCCTCCATTCCCCGCCCACTGATCACCGTCCGTCTC
GTCCCACCACCCCATCCCCTCCTTTTCCCCTTCTTCCCTCCCTCTCCAGT
GCCGCCGGTGCCCTCCTTGTGTACGACATAACACGCCGAGAGACGTTCAA
CCACCTCTCTCGCTGGCTCGAAGAAGCCAAGCTCTACTCGTCCCCCAACA
TGGTCATCATGCTGGTACGTGCCCTCCCTCCCTCCCAACCTCCCTCCCTC
TCCCCACCCTCTCTATCCTTAACGCACGTACACATCAATCGTTCTCACCA
CCTCTACAACTCACCCTCACTTCCTCCCTTCCTCCCCTCGCCCCTTTTTT
CATTCCTTTCTTAGGTGGGCAACAAAAGCGACGCAGGTGAGGAAGAGGAA
GGGAGGGAGGGAGGGCGCGGGGTGTCTGTTTTGGAGGACAATCTTGTTTT
CCTCTAAGCGAATGTATACCCTCGATTCCCTCCCTCCCTCCCTCCCTCCC
TTCCTCCCTCCCTTCCTCCCTCCCTCCCTCCCTTCCTCCCTCCCTCCCTT
CCTCCCTCCCTCCCTCCCTCCAGAGGCCCGCCGCGCCGTCTCCACCCTGG
AAGGGCAAGCGTTCGCTGACGAGCACGGGCTGCTATTCTTGGAAACGAGT
GCTCGGACCGGACAAAACGTCGAGGCGGCCTTCAGCAGCACGGCAGAGAA
AATCTACGACAACATTCTCAGGGGTATATATGACCCCAACAACGATGTAC
GTACCTTGCCCGCCCTCCCTCCCTCCTTCCCTCTCTCTCTCCCTCCCGTT
CTCCCTCCTTGAATGACAAAATACATGGTATGTACCACCCCTCCTCCCTA
TTCTCCTCCTTCCTCCCTTCCTCCCTTTTTCCCTCCACCCCTCTTCTCAT
TGACCTCCGTTTCTCCTTCGTCCGTTTGGCACCTCCAGCCCCCCCTCTAT
TCTTATTGCCCTCTCTCCCCCCCTTTCTCGCTCCCTCTCTCCCTTTCTCA
CTCAGACCCACGGCATAAAAGTCGGCGCACCAGGGGCAGGGCAAGGAGCA
CAAGGGAAGGGGGGAGGGCGGGTGGGAGGGCGGGAGGGTGCAGGGGCAGG
CTCTAGAAGTGGGTGTTGTTAGTAATTTGCCGTAAATGAAAATGTCCCGT
GTAAATAAGACGTCAAGATAAAGGAGGCAATTGCTATTCCCCCATCGTCG
AAGCTCGAGGGAGAAAGGGAAGGCGGAAAGGAGGGAAGAAGGGCGGAAGG
GGGGGAATGAGGGAGAGAAAAGGAATCTTGAAGAAAGAAGAGTACCTCGG
CAGGGTGTACATGATTTAT back to topCoding sequence (CDS) from alignment at scaffold_22:379488..381756- >mRNA_7999 ID=mRNA_7999|Name=jgi.p|Nanoce1779_2|181445|organism=Nannochloropsis oceanica|type=CDS|length=4914bp|location=Sequence derived from alignment at scaffold_22:379488..381756- (Nannochloropsis oceanica)
ACCCACGGCATAAAAGTCGGCGCACCAGGGGCAGGGCAAGGAGCACAAGG
GAAGGGGGGAGGGCGGGTGGGAGGGCGGGAGGGTGCAGGGGCAGGCTCTA
GAAGTGGGTGTTGTTAGAGGCCCGCCGCGCCGTCTCCACCCTGGAAGGGC
AAGCGTTCGCTGACGAGCACGGGCTGCTATTCTTGGAAACGAGTGCTCGG
ACCGGACAAAACGTCGAGGCGGCCTTCAGCAGCACGGCAGAGAAAATCTA
CGACAACATTCTCAGGGGTATATATGACCCCAACAACGATGTGGGCAACA
AAAGCGACGCAGTGCCGCCGGTGCCCTCCTTGTGTACGACATAACACGCC
GAGAGACGTTCAACCACCTCTCTCGCTGGCTCGAAGAAGCCAAGCTCTAC
TCGTCCCCCAACATGGTCATCATGCTGGTGTGGAATTCGGTGCTCGCATG
GTGCACATCGACGGCAAGGCTATTAAGTTACAGATCTGGGACACAGCCGG
CCAAGAATCCTTCCGTTCGATCACCCGCTCTTACTACCGCGGTCCCTCCC
TCCCTCCTCTCCCTCCCTCCTCTCCCTCAGGCGTGGGCAAGTCCTGCCTC
CTCCTACAATTCACAGACAAACGCTTCGTTCAAGTCCACGACTTGACCAT
TGATGAGCTACGCGTACCTATTTAAGAGCATCGTGATAGGGGACAGTGGT
TCACCCACGGCATAAAAGTCGGCGCACCAGGGGCAGGGCAAGGAGCACAA
GGGAAGGGGGGAGGGCGGGTGGGAGGGCGGGAGGGTGCAGGGGCAGGCTC
TAGAAGTGGGTGTTGTTAGAGGCCCGCCGCGCCGTCTCCACCCTGGAAGG
GCAAGCGTTCGCTGACGAGCACGGGCTGCTATTCTTGGAAACGAGTGCTC
GGACCGGACAAAACGTCGAGGCGGCCTTCAGCAGCACGGCAGAGAAAATC
TACGACAACATTCTCAGGGGTATATATGACCCCAACAACGATGTGGGCAA
CAAAAGCGACGCAGTGCCGCCGGTGCCCTCCTTGTGTACGACATAACACG
CCGAGAGACGTTCAACCACCTCTCTCGCTGGCTCGAAGAAGCCAAGCTCT
ACTCGTCCCCCAACATGGTCATCATGCTGGTGTGGAATTCGGTGCTCGCA
TGGTGCACATCGACGGCAAGGCTATTAAGTTACAGATCTGGGACACAGCC
GGCCAAGAATCCTTCCGTTCGATCACCCGCTCTTACTACCGCGGTCCCTC
CCTCCCTCCTCTCCCTCCCTCCTCTCCCTCAGGCGTGGGCAAGTCCTGCC
TCCTCCTACAATTCACAGACAAACGCTTCGTTCAAGTCCACGACTTGACC
ATTGATGAGCTACGCGTACCTATTTAAGAGCATCGTGATAGGGGACAGTG
GTTCACCCACGGCATAAAAGTCGGCGCACCAGGGGCAGGGCAAGGAGCAC
AAGGGAAGGGGGGAGGGCGGGTGGGAGGGCGGGAGGGTGCAGGGGCAGGC
TCTAGAAGTGGGTGTTGTTAGAGGCCCGCCGCGCCGTCTCCACCCTGGAA
GGGCAAGCGTTCGCTGACGAGCACGGGCTGCTATTCTTGGAAACGAGTGC
TCGGACCGGACAAAACGTCGAGGCGGCCTTCAGCAGCACGGCAGAGAAAA
TCTACGACAACATTCTCAGGGGTATATATGACCCCAACAACGATGTGGGC
AACAAAAGCGACGCAGTGCCGCCGGTGCCCTCCTTGTGTACGACATAACA
CGCCGAGAGACGTTCAACCACCTCTCTCGCTGGCTCGAAGAAGCCAAGCT
CTACTCGTCCCCCAACATGGTCATCATGCTGGTGTGGAATTCGGTGCTCG
CATGGTGCACATCGACGGCAAGGCTATTAAGTTACAGATCTGGGACACAG
CCGGCCAAGAATCCTTCCGTTCGATCACCCGCTCTTACTACCGCGGTCCC
TCCCTCCCTCCTCTCCCTCCCTCCTCTCCCTCAGGCGTGGGCAAGTCCTG
CCTCCTCCTACAATTCACAGACAAACGCTTCGTTCAAGTCCACGACTTGA
CCATTGATGAGCTACGCGTACCTATTTAAGAGCATCGTGATAGGGGACAG
TGGTTCACCCACGGCATAAAAGTCGGCGCACCAGGGGCAGGGCAAGGAGC
ACAAGGGAAGGGGGGAGGGCGGGTGGGAGGGCGGGAGGGTGCAGGGGCAG
GCTCTAGAAGTGGGTGTTGTTAGAGGCCCGCCGCGCCGTCTCCACCCTGG
AAGGGCAAGCGTTCGCTGACGAGCACGGGCTGCTATTCTTGGAAACGAGT
GCTCGGACCGGACAAAACGTCGAGGCGGCCTTCAGCAGCACGGCAGAGAA
AATCTACGACAACATTCTCAGGGGTATATATGACCCCAACAACGATGTGG
GCAACAAAAGCGACGCAGTGCCGCCGGTGCCCTCCTTGTGTACGACATAA
CACGCCGAGAGACGTTCAACCACCTCTCTCGCTGGCTCGAAGAAGCCAAG
CTCTACTCGTCCCCCAACATGGTCATCATGCTGGTGTGGAATTCGGTGCT
CGCATGGTGCACATCGACGGCAAGGCTATTAAGTTACAGATCTGGGACAC
AGCCGGCCAAGAATCCTTCCGTTCGATCACCCGCTCTTACTACCGCGGTC
CCTCCCTCCCTCCTCTCCCTCCCTCCTCTCCCTCAGGCGTGGGCAAGTCC
TGCCTCCTCCTACAATTCACAGACAAACGCTTCGTTCAAGTCCACGACTT
GACCATTGATGAGCTACGCGTACCTATTTAAGAGCATCGTGATAGGGGAC
AGTGGTTCACCCACGGCATAAAAGTCGGCGCACCAGGGGCAGGGCAAGGA
GCACAAGGGAAGGGGGGAGGGCGGGTGGGAGGGCGGGAGGGTGCAGGGGC
AGGCTCTAGAAGTGGGTGTTGTTAGAGGCCCGCCGCGCCGTCTCCACCCT
GGAAGGGCAAGCGTTCGCTGACGAGCACGGGCTGCTATTCTTGGAAACGA
GTGCTCGGACCGGACAAAACGTCGAGGCGGCCTTCAGCAGCACGGCAGAG
AAAATCTACGACAACATTCTCAGGGGTATATATGACCCCAACAACGATGT
GGGCAACAAAAGCGACGCAGTGCCGCCGGTGCCCTCCTTGTGTACGACAT
AACACGCCGAGAGACGTTCAACCACCTCTCTCGCTGGCTCGAAGAAGCCA
AGCTCTACTCGTCCCCCAACATGGTCATCATGCTGGTGTGGAATTCGGTG
CTCGCATGGTGCACATCGACGGCAAGGCTATTAAGTTACAGATCTGGGAC
ACAGCCGGCCAAGAATCCTTCCGTTCGATCACCCGCTCTTACTACCGCGG
TCCCTCCCTCCCTCCTCTCCCTCCCTCCTCTCCCTCAGGCGTGGGCAAGT
CCTGCCTCCTCCTACAATTCACAGACAAACGCTTCGTTCAAGTCCACGAC
TTGACCATTGATGAGCTACGCGTACCTATTTAAGAGCATCGTGATAGGGG
ACAGTGGTTCACCCACGGCATAAAAGTCGGCGCACCAGGGGCAGGGCAAG
GAGCACAAGGGAAGGGGGGAGGGCGGGTGGGAGGGCGGGAGGGTGCAGGG
GCAGGCTCTAGAAGTGGGTGTTGTTAGAGGCCCGCCGCGCCGTCTCCACC
CTGGAAGGGCAAGCGTTCGCTGACGAGCACGGGCTGCTATTCTTGGAAAC
GAGTGCTCGGACCGGACAAAACGTCGAGGCGGCCTTCAGCAGCACGGCAG
AGAAAATCTACGACAACATTCTCAGGGGTATATATGACCCCAACAACGAT
GTGGGCAACAAAAGCGACGCAGTGCCGCCGGTGCCCTCCTTGTGTACGAC
ATAACACGCCGAGAGACGTTCAACCACCTCTCTCGCTGGCTCGAAGAAGC
CAAGCTCTACTCGTCCCCCAACATGGTCATCATGCTGGTGTGGAATTCGG
TGCTCGCATGGTGCACATCGACGGCAAGGCTATTAAGTTACAGATCTGGG
ACACAGCCGGCCAAGAATCCTTCCGTTCGATCACCCGCTCTTACTACCGC
GGTCCCTCCCTCCCTCCTCTCCCTCCCTCCTCTCCCTCAGGCGTGGGCAA
GTCCTGCCTCCTCCTACAATTCACAGACAAACGCTTCGTTCAAGTCCACG
ACTTGACCATTGATGAGCTACGCGTACCTATTTAAGAGCATCGTGATAGG
GGACAGTGGTTCACCCACGGCATAAAAGTCGGCGCACCAGGGGCAGGGCA
AGGAGCACAAGGGAAGGGGGGAGGGCGGGTGGGAGGGCGGGAGGGTGCAG
GGGCAGGCTCTAGAAGTGGGTGTTGTTAGAGGCCCGCCGCGCCGTCTCCA
CCCTGGAAGGGCAAGCGTTCGCTGACGAGCACGGGCTGCTATTCTTGGAA
ACGAGTGCTCGGACCGGACAAAACGTCGAGGCGGCCTTCAGCAGCACGGC
AGAGAAAATCTACGACAACATTCTCAGGGGTATATATGACCCCAACAACG
ATGTGGGCAACAAAAGCGACGCAGTGCCGCCGGTGCCCTCCTTGTGTACG
ACATAACACGCCGAGAGACGTTCAACCACCTCTCTCGCTGGCTCGAAGAA
GCCAAGCTCTACTCGTCCCCCAACATGGTCATCATGCTGGTGTGGAATTC
GGTGCTCGCATGGTGCACATCGACGGCAAGGCTATTAAGTTACAGATCTG
GGACACAGCCGGCCAAGAATCCTTCCGTTCGATCACCCGCTCTTACTACC
GCGGTCCCTCCCTCCCTCCTCTCCCTCCCTCCTCTCCCTCAGGCGTGGGC
AAGTCCTGCCTCCTCCTACAATTCACAGACAAACGCTTCGTTCAAGTCCA
CGACTTGACCATTGATGAGCTACGCGTACCTATTTAAGAGCATCGTGATA
GGGGACAGTGGTTC back to top
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