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Properties
| Property Name | Value |
|---|
| TranscriptId | 591689 |
| Track | FilteredModels2 |
| ProteinId | 591603 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_12 | supercontig | scaffold_12:634629..636044 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_5168 ID=mRNA_5168|Name=jgi.p|Nanoce1779_2|591603|organism=Nannochloropsis oceanica|type=mRNA|length=1416bp
CTTGGCGTGCCGTGTTCTCAGGAGGGAGGAGGTTGACTGGGAGGAGGAGG
AAGAGGGAGGGGAAGAACGGAAGACAGAAGGTGACGCTGCTGCTGGATCT
GTTCAAAGTGAAGAGGAGAGGGGGGAAGGTGATGAGAATGAGAAGCAGAT
GCAGCAACGGCGGTGCTTGGAGGTGGTGGGTCGCCTGATTTCCCGGTCGA
ATATTCTCTTCCTAAACAGCACGTACGCGCAGGCCTTGCTCAGGGCCGGG
AGGGAGGAAGAGGCGAGGAAATTGAGCGAGCGGTTATTGGCGCACCGGAT
GGGAGAGGGGGAAAGCCCGGCGTGGAAGCAATTGACGTCCTATGCCTCGC
AGATGGTGGCGTTGGGAGTATTGGGGCAATGGCCTGTGGCCCATTATTTG
TACGACGAGATGCGATGTCGCCCGGGGAGTAGGCTCGCCGGGCGGGACCT
CTTCCTGTTGCGGGCGTTGATGAAGGCGTACCAGATGGAGGAGGAGCGAG
CAGAGCTTGCAGCGAGCAGCAGCAACGACAGCAGCAACGGCAAGACGGTG
TTGCACGATATGGCCTTAAAGGCTTACCAGCACGCGTATGCTGAAGGCTA
CGTGGACCATTGGAGTACCAAAAGACCGCAGATGATGGACGTGCATCGGT
ATTCACTCTATCTGGCACGATTGGCGGTAGAAACGGTTTTGCAGGACCTG
TTGGCCAAGCCCTGGCCAAAAGCAGTCGGAAGGGGAGGGAAGGGAGGAGG
AATAGGAAGAGGAGAAGGAGGCAGGGCATCGGCTACGTCCCTCCGAGATT
TGTGGATAGTGACCGGGGCGGGAAAGCATGATAACACCTTTCGCATCGGC
GTTTCTGAGACTTCTTTCAAGCCCCTTGCAAATTTTCAGTCCACGACGGT
CGACAGCGTGGACAGACAGGAGGAAAACTCGAACCCCTACAACATGACCT
TACGGAACAAGCTCGCAAGGGTCTTAGCCTTGGAGCATGGTCTCTTTTCA
GCGGAGGATCTCGAGCATCTTTCAGAACGAGGAGATGGACGTTTGCGAAT
TCGCAAGGAGGCCATCAGGGTGTGGTTGGCGAGGAGAAGGGAATGTCAAA
AGGGAGACCAGCTGAAGAAGACTGAAGAGCCGAAGCGACAGAGGGTGGTG
ATGAAAAAGGAGTTGGTCTGGTAATACCTTTTGTCCGGAAGGAGGAATGA
GGAGGAGACCGGTTGAGGCTGGGAAAATGCGATTAGTTGGGGAGGTATTT
ACAGGAACAAAGTGACTTTCTCCTGATAAAAAAGAAAATGATAGATATAG
GGGTGGGCCAGGCCCATGGGACAAATGAAAATGATTAAAGAAACAATGCA
CACTCGGTCCACTACTTTTGCTGGGCATAAACACTCTGAAGCTCCCTCGG
AAATTGTCGTTAAAAC back to topprotein sequence of jgi.p|Nanoce1779_2|591603 >mRNA_5168-protein ID=mRNA_5168-protein|Name=jgi.p|Nanoce1779_2|591603|organism=Nannochloropsis oceanica|type=polypeptide|length=342bp
MQQRRCLEVVGRLISRSNILFLNSTYAQALLRAGREEEARKLSERLLAHR
MGEGESPAWKQLTSYASQMVALGVLGQWPVAHYLYDEMRCRPGSRLAGRD
LFLLRALMKAYQMEEERAELAASSSNDSSNGKTVLHDMALKAYQHAYAEG
YVDHWSTKRPQMMDVHRYSLYLARLAVETVLQDLLAKPWPKAVGRGGKGG
GIGRGEGGRASATSLRDLWIVTGAGKHDNTFRIGVSETSFKPLANFQSTT
VDSVDRQEENSNPYNMTLRNKLARVLALEHGLFSAEDLEHLSERGDGRLR
IRKEAIRVWLARRRECQKGDQLKKTEEPKRQRVVMKKELVW* back to topmRNA from alignment at scaffold_12:634629..636044- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_5168 ID=mRNA_5168|Name=jgi.p|Nanoce1779_2|591603|organism=Nannochloropsis oceanica|type=mRNA|length=1416bp|location=Sequence derived from alignment at scaffold_12:634629..636044- (Nannochloropsis oceanica)
CTTGGCGTGCCGTGTTCTCAGGAGGGAGGAGGTTGACTGGGAGGAGGAGG
AAGAGGGAGGGGAAGAACGGAAGACAGAAGGTGACGCTGCTGCTGGATCT
GTTCAAAGTGAAGAGGAGAGGGGGGAAGGTGATGAGAATGAGAAGCAGAT
GCAGCAACGGCGGTGCTTGGAGGTGGTGGGTCGCCTGATTTCCCGGTCGA
ATATTCTCTTCCTAAACAGCACGTACGCGCAGGCCTTGCTCAGGGCCGGG
AGGGAGGAAGAGGCGAGGAAATTGAGCGAGCGGTTATTGGCGCACCGGAT
GGGAGAGGGGGAAAGCCCGGCGTGGAAGCAATTGACGTCCTATGCCTCGC
AGATGGTGGCGTTGGGAGTATTGGGGCAATGGCCTGTGGCCCATTATTTG
TACGACGAGATGCGATGTCGCCCGGGGAGTAGGCTCGCCGGGCGGGACCT
CTTCCTGTTGCGGGCGTTGATGAAGGCGTACCAGATGGAGGAGGAGCGAG
CAGAGCTTGCAGCGAGCAGCAGCAACGACAGCAGCAACGGCAAGACGGTG
TTGCACGATATGGCCTTAAAGGCTTACCAGCACGCGTATGCTGAAGGCTA
CGTGGACCATTGGAGTACCAAAAGACCGCAGATGATGGACGTGCATCGGT
ATTCACTCTATCTGGCACGATTGGCGGTAGAAACGGTTTTGCAGGACCTG
TTGGCCAAGCCCTGGCCAAAAGCAGTCGGAAGGGGAGGGAAGGGAGGAGG
AATAGGAAGAGGAGAAGGAGGCAGGGCATCGGCTACGTCCCTCCGAGATT
TGTGGATAGTGACCGGGGCGGGAAAGCATGATAACACCTTTCGCATCGGC
GTTTCTGAGACTTCTTTCAAGCCCCTTGCAAATTTTCAGTCCACGACGGT
CGACAGCGTGGACAGACAGGAGGAAAACTCGAACCCCTACAACATGACCT
TACGGAACAAGCTCGCAAGGGTCTTAGCCTTGGAGCATGGTCTCTTTTCA
GCGGAGGATCTCGAGCATCTTTCAGAACGAGGAGATGGACGTTTGCGAAT
TCGCAAGGAGGCCATCAGGGTGTGGTTGGCGAGGAGAAGGGAATGTCAAA
AGGGAGACCAGCTGAAGAAGACTGAAGAGCCGAAGCGACAGAGGGTGGTG
ATGAAAAAGGAGTTGGTCTGGTAATACCTTTTGTCCGGAAGGAGGAATGA
GGAGGAGACCGGTTGAGGCTGGGAAAATGCGATTAGTTGGGGAGGTATTT
ACAGGAACAAAGTGACTTTCTCCTGATAAAAAAGAAAATGATAGATATAG
GGGTGGGCCAGGCCCATGGGACAAATGAAAATGATTAAAGAAACAATGCA
CACTCGGTCCACTACTTTTGCTGGGCATAAACACTCTGAAGCTCCCTCGG
AAATTGTCGTTAAAAC back to topCoding sequence (CDS) from alignment at scaffold_12:634629..636044- >mRNA_5168 ID=mRNA_5168|Name=jgi.p|Nanoce1779_2|591603|organism=Nannochloropsis oceanica|type=CDS|length=1026bp|location=Sequence derived from alignment at scaffold_12:634629..636044- (Nannochloropsis oceanica)
ATGCAGCAACGGCGGTGCTTGGAGGTGGTGGGTCGCCTGATTTCCCGGTC
GAATATTCTCTTCCTAAACAGCACGTACGCGCAGGCCTTGCTCAGGGCCG
GGAGGGAGGAAGAGGCGAGGAAATTGAGCGAGCGGTTATTGGCGCACCGG
ATGGGAGAGGGGGAAAGCCCGGCGTGGAAGCAATTGACGTCCTATGCCTC
GCAGATGGTGGCGTTGGGAGTATTGGGGCAATGGCCTGTGGCCCATTATT
TGTACGACGAGATGCGATGTCGCCCGGGGAGTAGGCTCGCCGGGCGGGAC
CTCTTCCTGTTGCGGGCGTTGATGAAGGCGTACCAGATGGAGGAGGAGCG
AGCAGAGCTTGCAGCGAGCAGCAGCAACGACAGCAGCAACGGCAAGACGG
TGTTGCACGATATGGCCTTAAAGGCTTACCAGCACGCGTATGCTGAAGGC
TACGTGGACCATTGGAGTACCAAAAGACCGCAGATGATGGACGTGCATCG
GTATTCACTCTATCTGGCACGATTGGCGGTAGAAACGGTTTTGCAGGACC
TGTTGGCCAAGCCCTGGCCAAAAGCAGTCGGAAGGGGAGGGAAGGGAGGA
GGAATAGGAAGAGGAGAAGGAGGCAGGGCATCGGCTACGTCCCTCCGAGA
TTTGTGGATAGTGACCGGGGCGGGAAAGCATGATAACACCTTTCGCATCG
GCGTTTCTGAGACTTCTTTCAAGCCCCTTGCAAATTTTCAGTCCACGACG
GTCGACAGCGTGGACAGACAGGAGGAAAACTCGAACCCCTACAACATGAC
CTTACGGAACAAGCTCGCAAGGGTCTTAGCCTTGGAGCATGGTCTCTTTT
CAGCGGAGGATCTCGAGCATCTTTCAGAACGAGGAGATGGACGTTTGCGA
ATTCGCAAGGAGGCCATCAGGGTGTGGTTGGCGAGGAGAAGGGAATGTCA
AAAGGGAGACCAGCTGAAGAAGACTGAAGAGCCGAAGCGACAGAGGGTGG
TGATGAAAAAGGAGTTGGTCTGGTAA back to top
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