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Properties
Property Name | Value |
TranscriptId | 585210 |
Track | FilteredModels2 |
ProteinId | 585124 |
Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
scaffold_7 | supercontig | scaffold_7:1053366..1055766 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_3265 ID=mRNA_3265|Name=jgi.p|Nanoce1779_2|585124|organism=Nannochloropsis oceanica|type=mRNA|length=1436bp AGGCGATCAACCCAAGGCATGCAGGTCAGATAAAGCCTTCTTCGAGCCTA CAAAGGATGCGGCAGAATATAAATCGACTCGCAAGTGATGGCAGCCTTAG GAAGAGGCCAAGAAGGCTGTCAAATCAGGCGCTAGCTAAGCGGCAGCGAA TCGAGGACGGAGGGACGTGTGGGGGTGCGACGGCTTCGAAAAAAGGAAGC CTGGTCGGCCCAAGCAGGGAATATCTACGACAATATCACCACAATCCGCA TGAATTCACTCTGCCTTAATTGCTTTAATCAATCCCGCTTCTAATGCACG CCGTCTGACTGCGTCGAAGTGCCTGGTTGCTGCAGCGCCTTGACTCGCCG AAGACCTCTCTTTTCTGGGCGAGAGAGAGGGGCCTCCTGGAGGCGGCCCA CATGCAAAGTAAAACCCTGAGTGTTGAGAACTCCTGATACACGTGCTTGT TTCACCTTCACACAGCCTCCCTACAAGCACACGAGATCCTTGGTCTCTGA CGCCCGTCCATTTCGAGACGCACACACGCCAAGTCGGCAGCCACTATACA CGCCCATCGTGATGCAGAAAGCCTGCGTAAGAAGGGGACCCGAGGCCAAG CAATAAGTCCGCATTCCACTCTTCCGCCGCATTCCACAAGCCACTCATTG CGCCGGTGGAAGGCTAATCGACATCCATGGGTGCTCAAGCCTTTGACCCC AAGCTGATAGTCTACCAGATCATCGCCCTTCAGTGCCTGTACTATTTGGT CGAGGGGGGAATCTTGATGGGATTTAATTTAATTTTCGGTACGGACGTGT CCATGACACAAATATTCACGCCCAAGGGTCTGGAAATAGGATCGGCCGAA GGGCTTCTGAACGTGATGGCGTTGTTACTGTCCTTTGTGGCGGGCTCGGT GCTTTTGTGTGTGGTAGTGGAGCGGGCGAAGAAGTGCCTCGACTTCACCG TAACGCTATTCTTTTTCCACTTTCTCGCTTGCGGTGTGTACGAGTCATTC CCCTCCACCCTCCTCTGGTGGGTCTGCCACCTTGTGGGCCTCTCCGTCAT GACCTTGCTTGGCGAGCACCTATGTGCCCGCAGCGAGCTCCGAGACATCC CCCTCTTCGTAATCGACCAAACCACAGGATGACGTATTGAATCGTCTCTT GTCGTGGACAAGAACATAAGAGTCATGATGAATAAATAAGAGAGAGCATG TCTATGAGAGCGAGATGGCCTATCTTTCTCCTACACCCTGCCTACCCCTA CCTAAGACCCCTGTCCCTGTTTTTGAAAATAAAATGAGTCAAAAATAATC AAAAGAAATGAATATGAAAAACCTGACGACCTGCGGTACTACTTTTTGGA AAAAAAAGGCATGACAATCGAATTTATGTATGGGTATGAATTCCATCACA AATAGTTGACAACGAGAAACAACCAACTCTCCTTAG back to topprotein sequence of jgi.p|Nanoce1779_2|585124 >mRNA_3265-protein ID=mRNA_3265-protein|Name=jgi.p|Nanoce1779_2|585124|organism=Nannochloropsis oceanica|type=polypeptide|length=152bp MGAQAFDPKLIVYQIIALQCLYYLVEGGILMGFNLIFGTDVSMTQIFTPK GLEIGSAEGLLNVMALLLSFVAGSVLLCVVVERAKKCLDFTVTLFFFHFL ACGVYESFPSTLLWWVCHLVGLSVMTLLGEHLCARSELRDIPLFVIDQTT G* back to topmRNA from alignment at scaffold_7:1053366..1055766+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_3265 ID=mRNA_3265|Name=jgi.p|Nanoce1779_2|585124|organism=Nannochloropsis oceanica|type=mRNA|length=2401bp|location=Sequence derived from alignment at scaffold_7:1053366..1055766+ (Nannochloropsis oceanica) AGGCGATCAACCCAAGGCATGCAGGTCAGATAAAGCCTTCTTCGAGCCTA
CAAAGGATGCGGCAGAATATAAATCGACTCGCAAGTGATGGCAGCCTTAG
GAAGAGGCCAAGAAGGCTGTCAAATCAGGCGCTAGCTAAGCGGCAGCGAA
TCGAGGACGGAGGGACGTGTGGGGGTGCGACGGCTTCGAAAAAAGGAAGC
CTGGTCGGCCCAAGCAGGGAATATCTACGACAATATCACCACAATCCGCA
TGAATTCACTCTGCCTTAATTGCTTTAATCAATCCCGCTTCTAATGCACG
CCGTCTGACTGCGTCGAAGTGCCTGGTTGCTGCAGCGCCTTGACTCGCCG
AAGACCTCTCTTTTCTGGGCGAGAGAGAGGGGCCTCCTGGAGGCGGCCCA
CATGCAAAGTAAAACCCTGAGTGTTGAGAACTCCTGATACACGTGCTTGT
TTCACCTTCACACAGCCTCCCTACAAGCACACGAGATCCTTGGTCTCTGA
CGCCCGTCCATTTCGAGACGCACACACGCCAAGTCGGCAGCCACTATACA
CGCCCATCGTGATGCAGAAAGCCTGCGTAAGAAGGGGACCCGAGGCCAAG
CAATAAGTCCGCATTCCACTCTTCCGCCGCATTCCACAAGCCACTCATTG
CGCCGGTGGAAGGCTAATCGACATCCATGGGTGCTCAAGGTACGTTTTTG
GAGAGGGGTGTATGCAGGGCAATGTTACTATTCCCCTTTGCCTTCCCGCG
TTGCTCATCCCACCCTTTTCTACACACATTTTCACACCCCTTTCCTGCCA
CCTTCCTTACCGCACTTCCACCCGTGCCTTTACTGCCTCTCTCCCTTCCC
GCTCTTCCCGACCACCCCAAACCCCCACTACCCCACAACAACAACAACAC
CCGTATCCGCACCACCGACCCATCCCTTCTTGCCCCCCCGGCCCGTCCAT
CCCCCCTTCCCCTCGTTCTACTCCCACCCCAGCCTTTGACCCCAAGCTGA
TAGTCTACCAGATCATCGCCCTTCAGGTATTCTATTTGTAGCTCTTCATC
CTACCCTTTGCATCATCCCCACATGTTTTGACTCATTCTTTCCTCCCTCG
CTCCCTCGCTCCCTCGCTCCCTTGCTCGATTCGCTCTCTTCGTTGCGCCA
GTGCCTGTACTATTTGGTCGAGGGGGGAATCTTGATGGGATTTAATTTAA
TTTTCGGTACGGACGTGTCCATGACACAAATATTCACGCCCAAGGGTCTG
GAAATAGGATCGGCCGAAGGGCTTCTGAACGTGATGGCGTTGTTACTGTC
CTTTGTGGCGGGGTAAGAAAGGAGGGAAAAAGAGAGGGAAGGATCGCGCA
TCCAAACATGCTCATCCACGGTTTCCATAGATTAGCTCAACTATTCAAAT
TAGATTTATTTTTTTCCTCTCCCATTTCATACGGATGAAACCAACAGCTC
GGTGCTTTTGTGTGTGGTAGTGGAGCGGGCGAAGAAGTGCCTCGACTTCA
CCGTAACGCTATTCTTTTTCCACTTTCTCGCTTGCGGTGTGTACGAGGTA
AGGCGAAACTGGAATCGGGAACTTGTAGTGCATGACGACTATCCCCCTTC
TACGCTGAAACACATGATTAGACATTGTGCGGTGTTATTAACATGTGAGG
GCGGAAGGGAGGAAAAGCCGACCTGCCCATAAATGAAACACCGGGATTCT
GATGTTTTCCCTAATCTATTCTACCCACAGTCATTCCCCTCCACCCTCCT
CTGGTGGGTCTGCCACCTTGTGGGCCTCTCCGTCATGACCTTGCTTGGTA
CGTACAAAGCTTGAAACAAAGCACCCAGTTGTTGTTGTGACGGCCATGTT
TTTGTGCCATTTGCTTTTTCTCGTGTTTCACTCTGTACTTACTGCTGATT
TCTACGTATTCTCGTTCCATCAACCACCACCAATAGCTATCTCCAAAATT
ATAATGCGTTTTCTATTTCATTCTCATAAGCACCCTTCCTCCCTCCCTCC
CTTGCTTCCTCCCTCATTCTCCAAAGGCGAGCACCTATGTGCCCGCAGCG
AGCTCCGAGACATCCCCCTCTTCGTAATCGACCAAACCACAGGATGACGT
ATTGAATCGTCTCTTGTCGTGGACAAGAACATAAGAGTCATGATGAATAA
ATAAGAGAGAGCATGTCTATGAGAGCGAGATGGCCTATCTTTCTCCTACA
CCCTGCCTACCCCTACCTAAGACCCCTGTCCCTGTTTTTGAAAATAAAAT
GAGTCAAAAATAATCAAAAGAAATGAATATGAAAAACCTGACGACCTGCG
GTACTACTTTTTGGAAAAAAAAGGCATGACAATCGAATTTATGTATGGGT
ATGAATTCCATCACAAATAGTTGACAACGAGAAACAACCAACTCTCCTTA
G back to topCoding sequence (CDS) from alignment at scaffold_7:1053366..1055766+ >mRNA_3265 ID=mRNA_3265|Name=jgi.p|Nanoce1779_2|585124|organism=Nannochloropsis oceanica|type=CDS|length=2736bp|location=Sequence derived from alignment at scaffold_7:1053366..1055766+ (Nannochloropsis oceanica) ATGGGTGCTCAAGCCTTTGACCCCAAGCTGATAGTCTACCAGATCATCGC CCTTCAGTGCCTGTACTATTTGGTCGAGGGGGGAATCTTGATGGGATTTA ATTTAATTTTCGGTACGGACGTGTCCATGACACAAATATTCACGCCCAAG GGTCTGGAAATAGGATCGGCCGAAGGGCTTCTGAACGTGATGGCGTTGTT ACTGTCCTTTGTGGCGGGCTCGGTGCTTTTGTGTGTGGTAGTGGAGCGGG CGAAGAAGTGCCTCGACTTCACCGTAACGCTATTCTTTTTCCACTTTCTC GCTTGCGGTGTGTACGAGTCATTCCCCTCCACCCTCCTCTGGTGGGTCTG CCACCTTGTGGGCCTCTCCGTCATGACCTTGCTTGGCGAGCACCTATGTG CCCGCAGCGAGCTCCGAGACATCCCCCTCTTCGTAATCGACCAAACCACA GGATGAATGGGTGCTCAAGCCTTTGACCCCAAGCTGATAGTCTACCAGAT CATCGCCCTTCAGTGCCTGTACTATTTGGTCGAGGGGGGAATCTTGATGG GATTTAATTTAATTTTCGGTACGGACGTGTCCATGACACAAATATTCACG CCCAAGGGTCTGGAAATAGGATCGGCCGAAGGGCTTCTGAACGTGATGGC GTTGTTACTGTCCTTTGTGGCGGGCTCGGTGCTTTTGTGTGTGGTAGTGG AGCGGGCGAAGAAGTGCCTCGACTTCACCGTAACGCTATTCTTTTTCCAC TTTCTCGCTTGCGGTGTGTACGAGTCATTCCCCTCCACCCTCCTCTGGTG GGTCTGCCACCTTGTGGGCCTCTCCGTCATGACCTTGCTTGGCGAGCACC TATGTGCCCGCAGCGAGCTCCGAGACATCCCCCTCTTCGTAATCGACCAA ACCACAGGATGAATGGGTGCTCAAGCCTTTGACCCCAAGCTGATAGTCTA CCAGATCATCGCCCTTCAGTGCCTGTACTATTTGGTCGAGGGGGGAATCT TGATGGGATTTAATTTAATTTTCGGTACGGACGTGTCCATGACACAAATA TTCACGCCCAAGGGTCTGGAAATAGGATCGGCCGAAGGGCTTCTGAACGT GATGGCGTTGTTACTGTCCTTTGTGGCGGGCTCGGTGCTTTTGTGTGTGG TAGTGGAGCGGGCGAAGAAGTGCCTCGACTTCACCGTAACGCTATTCTTT TTCCACTTTCTCGCTTGCGGTGTGTACGAGTCATTCCCCTCCACCCTCCT CTGGTGGGTCTGCCACCTTGTGGGCCTCTCCGTCATGACCTTGCTTGGCG AGCACCTATGTGCCCGCAGCGAGCTCCGAGACATCCCCCTCTTCGTAATC GACCAAACCACAGGATGAATGGGTGCTCAAGCCTTTGACCCCAAGCTGAT AGTCTACCAGATCATCGCCCTTCAGTGCCTGTACTATTTGGTCGAGGGGG GAATCTTGATGGGATTTAATTTAATTTTCGGTACGGACGTGTCCATGACA CAAATATTCACGCCCAAGGGTCTGGAAATAGGATCGGCCGAAGGGCTTCT GAACGTGATGGCGTTGTTACTGTCCTTTGTGGCGGGCTCGGTGCTTTTGT GTGTGGTAGTGGAGCGGGCGAAGAAGTGCCTCGACTTCACCGTAACGCTA TTCTTTTTCCACTTTCTCGCTTGCGGTGTGTACGAGTCATTCCCCTCCAC CCTCCTCTGGTGGGTCTGCCACCTTGTGGGCCTCTCCGTCATGACCTTGC TTGGCGAGCACCTATGTGCCCGCAGCGAGCTCCGAGACATCCCCCTCTTC GTAATCGACCAAACCACAGGATGAATGGGTGCTCAAGCCTTTGACCCCAA GCTGATAGTCTACCAGATCATCGCCCTTCAGTGCCTGTACTATTTGGTCG AGGGGGGAATCTTGATGGGATTTAATTTAATTTTCGGTACGGACGTGTCC ATGACACAAATATTCACGCCCAAGGGTCTGGAAATAGGATCGGCCGAAGG GCTTCTGAACGTGATGGCGTTGTTACTGTCCTTTGTGGCGGGCTCGGTGC TTTTGTGTGTGGTAGTGGAGCGGGCGAAGAAGTGCCTCGACTTCACCGTA ACGCTATTCTTTTTCCACTTTCTCGCTTGCGGTGTGTACGAGTCATTCCC CTCCACCCTCCTCTGGTGGGTCTGCCACCTTGTGGGCCTCTCCGTCATGA CCTTGCTTGGCGAGCACCTATGTGCCCGCAGCGAGCTCCGAGACATCCCC CTCTTCGTAATCGACCAAACCACAGGATGAATGGGTGCTCAAGCCTTTGA CCCCAAGCTGATAGTCTACCAGATCATCGCCCTTCAGTGCCTGTACTATT TGGTCGAGGGGGGAATCTTGATGGGATTTAATTTAATTTTCGGTACGGAC GTGTCCATGACACAAATATTCACGCCCAAGGGTCTGGAAATAGGATCGGC CGAAGGGCTTCTGAACGTGATGGCGTTGTTACTGTCCTTTGTGGCGGGCT CGGTGCTTTTGTGTGTGGTAGTGGAGCGGGCGAAGAAGTGCCTCGACTTC ACCGTAACGCTATTCTTTTTCCACTTTCTCGCTTGCGGTGTGTACGAGTC ATTCCCCTCCACCCTCCTCTGGTGGGTCTGCCACCTTGTGGGCCTCTCCG TCATGACCTTGCTTGGCGAGCACCTATGTGCCCGCAGCGAGCTCCGAGAC ATCCCCCTCTTCGTAATCGACCAAACCACAGGATGA back to top
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