jgi.p|Nanoce1779_2|628177, mRNA_2011 (mRNA) Nannochloropsis oceanica | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	jgi.p\|Nanoce1779_2\|628177
Unique Name	mRNA_2011
Type	mRNA
Organism	Nannochloropsis oceanica (N. oceanica CCMP1779)
Sequence length	5590
Alignment location	scaffold_4:556213..562163 -

Link to JBrowse

Properties


Property Name	Value
TranscriptId	628263
Track	FilteredModels2
ProteinId	628177

Mutants

Expression

No biomaterial libraries express this feature.

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
scaffold_4	supercontig	scaffold_4:556213..562163 -

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Gene prediction for N. oceanica CCMP1779	2008-02-01

Annotated Terms

Homology

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
jgi.p\|Nanoce1779_2\|628177	gene_2011	Nannochloropsis oceanica (N. oceanica CCMP1779)	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
jgi.p\|Nanoce1779_2\|628177	mRNA_2011-protein	Nannochloropsis oceanica (N. oceanica CCMP1779)	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
CDS_2011	CDS_2011	Nannochloropsis oceanica (N. oceanica CCMP1779)	CDS

Sequences

The following sequences are available for this feature:

mRNA sequence
protein sequence
mRNA from alignment at scaffold_4:556213..562163-
coding sequence from alignment at scaffold_4:556213..562163-

mRNA sequence

>mRNA_2011 ID=mRNA_2011|Name=jgi.p|Nanoce1779_2|628177|organism=Nannochloropsis oceanica|type=mRNA|length=5590bp
CGAAGAGCGGCAGGGCGAGCTGGAATTGGAGGAAATCCTCGAGGAAGTTA
TGGAAGCAGCGGAGGAAGGGATAGAGGAAGAGTCGGCGCCAATAGGAGAT
GCTGTGCCTTCCGCTGCTATCGACGACGAGCAGCAGCAGCGGCAGCGGCA
ACAGGAGCAGCAGCAGCAGCAGCAGCAGTCTGTAGTAGGAGAGTGGGAGG
AAGAGAAGGCTGGATTGGTCAAGGAGAAGATGGCGCTGACACAGGAGGTG
GAAAATCTCAAGGCCCGTTTGGAAGCAGAATCACTCGCCAGGAGCAAGGG
GGGCGAGGGAGAAGGAGAGATAGAGGGCGCGTCGATCCTGCAAGTGAGGA
TAGGAGAGCTTGAGACCGAGCTAGAGAAAGCTGAAGAGACGCTGATAAAC
ACCGTGGGTGTGTGGAAGCACAAATTAGAGGTCATGACTGCAGAAAGGGA
TTTGCTGAAAGGTGAGGTGGGGCATTTGCATGTGTCGGTGGAGGAGAAAG
AGAAGGAGGTAGTGGAGGCGTATGCAAGGGTGGAAAAAGTAGAGGGCTTG
CATCGGCAGGTGGTGGAGGACTTGAAGCGGCTGGAGGATGTCCGGGGGAT
AGGATGGGAGGGGATGAAGAAGGCGGGGAGAGTGCGGACACATGAGCGTG
TGGGAGGGGAAGAAGGGGACGGGGAAGAGGGGGAGGAGAGGGAAGGAGAA
TACGACGGCGAGGAAGAAGCAGTCCAGGAGGAGGAAGTAGAAAAAGACGA
GGAAGAAGGAGGAGAAGAAGACAACCACCACGACCACCAACAACACCAAC
GCTCCCTCCTTGGACGCGTCGTTTCCGCCTACGCCCGCATCTGGGTCCCC
AAAGCATTTCAACGCCCCACCGAGGAAGAACAAGCCCTGTGGGCTCTCAA
TCGGACAGTGGCCCGCCTGCGTGAAAACGGCAGTGCATTGCGCGAGATGC
TTGAAAGCCGTAATAATCTGGTGGATGAGTTGCACTCACGGATAGAGGGG
TACGAAGAAGAGGGAGAGCGTCGTCGAAAAACTGTCCGTTGTCTGCGCGA
GGCCCTGGCGGAGCTCACGGAAGAGGTGAATGCCAAGAATGAAGAGGCGG
GAGCGTTGAGACAGGAACTTAAAGGCGTAGTGCAGGAATTTTTGTGGAAA
GACGCGAATCTCACTTCATTAACCACGCGGGCAAAGGTGGGGGAGGCACG
CGTCCAGGACCTGGAAGCAGAGCTTGCGAGGGTGGAGGGGGAGAAAGCGC
AGGCCATGGCGAAAGTCGTGAGTTTGAATGCGAAGTTGGCCGAGGCGGAG
GGAAATGTGGAAGCGTTGAAGGAGGAAATGGGGCAGGTTAGGGGGGCAGC
GAAGGAGCAGGAGGAGAGGATCGTGCTGCTGGAGGAGGAAAGGAGGGCAG
TGAGCGAGCAGTTGCGGGAGGCCGTAGCGACAGGGGCAGCAGCGTCGGAT
AAGGCACAGGAGTTGTATAGGGAGAGGGATCTGTTGCGAGCTACGATAAA
GGCGGCGGAGGAGGAAAAAAGGGCGAAAGAGGAGGAGGAGAGGAGAAGGA
GGGAAGAATGGGAGGCGGCGGAGGAGGAAAGGAGGAAAATGGAGGAAGAA
CGGATGATCGCGGAGCATCAAGGAAATAATAGATTTGACAGGAATGAAAA
AAAGAAAGCGAAAGAGGAAGGATGGAAATGAACTTGTGTGTATGTGTGTG
TACGTGTGTGTATGTGTGTGTAAGAGTGAGTGTGAGAGAGAGGGAGCGAG
AGAGAGAGTGAGAGAGAGAGAGAAAGAGAGAGAGAGAGAGAAAAAGAGAG
TGAGAAAGAAAAAGAGAGTGTGTGAGAGAGAGAATGATAGATAGATAGAG
ATATTTCAAGACCAGCTTAGCAGCAACAACGAGAAGAACCAAAGTAAGCG
TATATTAGCATTCACGTCAAAAGCCAGGACAGATTTCTACTATATGTCTA
TCTGGTTCGGTGGGAAAGTGTGTTAACTGAAAGTCCCGTTTTCCTAACTT
CTTATTTGCTCTCGTATACTTGCGTTTCCATGATCTGCATCTACTGCACA
CATCGTTTTTGTTCCCGCTGTTTTTGGTGGTTGCTCTTATCTCGTCGTCG
TTGCCGTAAACGCTATCTTCCGTCCGTCCCTCCCTCCCTTCCTCCCTTCC
CCTTACACTGTTCAGTGTGACTGCTTTGATATATGCTTGTCTTATCTTTT
CGACTACTATCACTACCACCACCACTGTAATAAGAATAACAACAAGTACT
ACAACTACAACAACAACGTCTACTACCACAACTGCCGCTGCCCCTGGTTG
TGGAGTATCCTTCTAAAACGCACACACGCGCTGGTACACGATACGAATTC
AATACAGATAGATGCCCGTCCTCGTCAAACACTTCCTTATACTAGTTCAT
TACCCCCTTCTATTGCGGACGTGTTCTCGTCCCCCCTAAACCACCTCCCG
AGCTAATATAAAAAACACTGCTCTTTTTTACACCTGTCTTCGTAACTCTC
CTTTTTCCTGAGAGTGAAAAATGCACCCCGTCGTCTTTTTTCCGATTCAC
TTGATCTATGCGAAGCAAAGAGTACTGCCGGCTTCCTCCTGCCTCCTCAT
TCATTTTCTCCACACCGGTCTCACCGTATCTCTTTTCAGATATGCCTGCC
TCGCCTCCTCTTACGGAGCGGCACGCACCCAGACCCACACGCACTCTTTG
TCACATAATCAACAGATATACACACGCACTACATGATCCATCACTACGTA
TTCCCTCAATGTAAGGGAACAAGTGTGACGTTTAAAAGCCAAAAATGAAG
GTCCCGCCTCTGTCTCCCCCTCCCTCCTCACCCCTTTCCCCGCTTCGACA
AAAGGGAAGAAGGGACAGAGCAATATACGACACGCCTTTTACCCATGTTC
CCTTCCTCGTCGTCATCCCTAAAAATAAGCCTGGAACCTCCCCGAACAAT
GCAACAAACTCATCATATACAGCATGGCAGGGTAGTACCGCCCCTTTCCC
TCCGGCATGTCCTGCTCCCACAATTCCTTCACAAATGAAGACATCAACTT
TTCATCTTTCGTCGCCAATGCCACCACCGCATTCATGCTCACAAGACCCG
CATCATGCCCTGAGTTGTTGTCGGCAAGCTTCCCATCCATTGTGAATTGA
CTCCCGTACTTCGGTCCTTGACTTGCAAAAAAACCCAAGAAACGATCTGC
ATACTTCTGTTGCCACCCGTCCATGTTCCACCACGCCCAGTCCACTGCCA
CATTTGCCGGGGCTCTCCACGCATCCCACTGAAAATTACTATGCCCCTCC
AAATTAGGATCCGACGCTCCCTTCCCTTCCAACGTGGTGTAGTCAGGAAT
GAGCCCCGTTTTGGGATCAGCGGCCACGTGGAAGAACTTCCGGCTTTGCA
TCGCGGACTTGGACCAGAACTTGGCCGCGCGTGGGTCGCCTTCATTTTTG
AGGAATCGGGCGAAAGCTTCGTAGAAGTGGGGGAGGTGGTATGACGGGTT
GGAGTGCCTGAGCCCCCAGTCAGTCGGGTTGAAGGTGGCTTTCCCGTCTT
TGGTGAAAAAGCCTTTTTTCGAGTTTCCCATGGCGTGGATGAGGCGCATT
GCTTCCGCTTTGTATGGATACCCAATGCTGGAGCCCCATTTCCGATGTGC
TGCTATGAGAGCTGTTGCAATGTAAGCTTCTGCGTCCGGGGCGGGGACCA
CGTCTTTCGCATCGATGAGTAGGCCACCGCGCGTGACACGCCAGGCGAAA
AATGTCTCGTACGTGCCCGCCGTGTGCTGCATGTGAAAGCGGGCCCAGTT
CCACAGCCGGTTGAACGCCTCCTGCTTCTGTAAATGTACACACGTTATCA
TCCCATAGCTGATCCCCTCAGAAGTCACCACATTACTCTCCGTATTAATA
ATCTGAGCCATGTTTGGTTCCACTTCAACATACAACCCTGTCTTTTCGAT
ATCCCCCTTGAAATAGTTGTCCCATACCCCCTCCAATTTCGTGTCCGTCT
CAACAATAGACTTATCCATCACCTCTGTGAAGAGATTCCTATAAATGCCC
GTCCCCGCCGCGCCGTCATCCCCCCCAGGGCCAAGGGCTTCGATGCCTGT
CCGCCTTGCCGCTGAAATGACAATGCCGATCAGGAAAAGAAGGACGGCCA
CAGTAAGCATCAGGCACAGCGCTTGCTGTCGACGCGTCAATTTGCGAGGA
TTCAGAAACGGAGGCAAGTTGTCCATCCACCCTTTCGGTGGCTCTCGTCG
GTGAGGGAGGATTTTGTACGAATCCTTGGAAAAAAAACCGGGGTGCCCCC
CTAATCCAAACGCGTCCTCCCCCCCTGCTTGCCCTGATTCGACGTTAAAA
GGCAGAATGTCGTCATCTCCACCATTGTCGGTGAAGGAGGAGGTAGCCAA
GGGGTCGGCACGCCGAAATGAATGGAAACGGGGGTCCAATCGAGAATTGG
CGGTGGGAAGACTGCCGTCTGTAGTATTGGAGGTAGGGGTGTGTGGACGG
AGGGGCTTGGGAGGACGAGGAGAATGAACGCTTCTGTTGGTGCTGCTGGT
TTTCCCTTTAAAAGATGCAGCGGCAATGGCAGCCGCAGCAGTGGCTGACC
AGATGGAGGAGGGGCCATGTGCTGAAATGGAGGAGATGGAGGAGGTGGAG
GTTAAGTCCGAGGAAGGTGACGACTTACGACCAGGCGAAGCCCTCCCGCC
CATGACTGCGGCTGCTTTCACTGAGGATGTGGCAGGAAGTGTAGAGGGGA
TGGAATCGGCTGGTATTATGCCCTTCGTGTGTTTGCGAAAAGAGTTCTCG
GTAAAAGCGGAGGTGTTGGGGGCAGCATTGGCTGCGGCTGGGCCATTTTC
GCGGGGGACGCGCCAAGGACTGCTTCTGACGTCTGTGTTGAAAGGCTTAT
TGTAGCATAGGGTAAAAAGGACGGGGGGAGGGGAGTATGGGGACTTAGTA
GATGGTCTAGAGGGGAGGTCACCTAATTACGGACCCGTGGGGAGGTGGGG
GGGGGGAGAAGCTGGCAGACAGCCAAGAAAGGGAAAAGCAAGCACGTGGC
ATGACAGCAGACAAGTTCAGCCTGCTTGTTAACGCACACATGCAGCCAAG
CTCCGGTCAAGCACACCCAAAGGCGAAAATAGTGTGCCTGTAGAAGATGC
CTAGAGTAAACTTTGGGGCCAACGTTTGTTCCGGAATAAAGCGGGGGTGG
ACATTGCCAACTACACTCCACAGTGCACTCTCGTCTCCTTCACGCGTCTC
TTCCCCGCCTTTCCCTCCAGGCATGCCGGCGTGCGCACGGTCAAGCCTTT
GGAAACCGTCTGGACGTGCCGCTCGACGGGCCCTGCAAGAAAGGACAAAT
CTTCGCTCCTATTGACGTCGACTTGGTCGGAGACCGCCACTTTCCCCAAT
ACACGTTAAGGCAATCTCGTTCATGTGTCCTTTGCGGTATGTACTTACAT
AGTCGATGTCGTCGGTGGCAGAGGCCACCAGGTTGCGACCCATTGCCCCC
CAGCTCGTCAAGAGATCCGCGCGCCTCTCCTGGCTTCGGGAACTGCTGGT
CTTGAAGGAACTTGCCCGGCTTGTAAAAGCGCGCCTTCCT

protein sequence of jgi.p|Nanoce1779_2|628177

>mRNA_2011-protein ID=mRNA_2011-protein|Name=jgi.p|Nanoce1779_2|628177|organism=Nannochloropsis oceanica|type=polypeptide|length=544bp
MEAAEEGIEEESAPIGDAVPSAAIDDEQQQRQRQQEQQQQQQQSVVGEWE
EEKAGLVKEKMALTQEVENLKARLEAESLARSKGGEGEGEIEGASILQVR
IGELETELEKAEETLINTVGVWKHKLEVMTAERDLLKGEVGHLHVSVEEK
EKEVVEAYARVEKVEGLHRQVVEDLKRLEDVRGIGWEGMKKAGRVRTHER
VGGEEGDGEEGEEREGEYDGEEEAVQEEEVEKDEEEGGEEDNHHDHQQHQ
RSLLGRVVSAYARIWVPKAFQRPTEEEQALWALNRTVARLRENGSALREM
LESRNNLVDELHSRIEGYEEEGERRRKTVRCLREALAELTEEVNAKNEEA
GALRQELKGVVQEFLWKDANLTSLTTRAKVGEARVQDLEAELARVEGEKA
QAMAKVVSLNAKLAEAEGNVEALKEEMGQVRGAAKEQEERIVLLEEERRA
VSEQLREAVATGAAASDKAQELYRERDLLRATIKAAEEEKRAKEEEERRR
REEWEAAEEERRKMEEERMIAEHQGNNRFDRNEKKKAKEEGWK*

mRNA from alignment at scaffold_4:556213..562163-

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_2011 ID=mRNA_2011|Name=jgi.p|Nanoce1779_2|628177|organism=Nannochloropsis oceanica|type=mRNA|length=5951bp|location=Sequence derived from alignment at scaffold_4:556213..562163- (Nannochloropsis oceanica)
CGAAGAGCGGCAGGGCGAGCTGGAATTGGAGGAAATCCTCGAGGAAGTTA
TGGAAGCAGCGGAGGAAGGGATAGAGGAAGAGTCGGCGCCAATAGGAGAT
GCTGTGCCTTCCGCTGCTATCGACGACGAGCAGCAGCAGCGGCAGCGGCA
ACAGGAGCAGCAGCAGCAGCAGCAGCAGTCTGTAGTAGGAGAGTGGGAGG
AAGAGAAGGCTGGATTGGTCAAGGAGAAGATGGCGCTGACACAGGAGGTG
GAAAATCTCAAGGCCCGTTTGGAAGCAGAATCACTCGCCAGGAGCAAGGG
GGGCGAGGGAGAAGGAGAGATAGAGGGCGCGTCGATCCTGCAAGTGAGGA
TAGGAGAGCTTGAGACCGAGCTAGAGAAAGCTGAAGAGACGCTGATAAAC
ACCGTGGGTGTGTGGAAGCACAAATTAGAGGTCATGACTGCAGAAAGGGA
TTTGCTGAAAGGTGAGGTGGGGCATTTGCATGTGTCGGTGGAGGAGAAAG
AGAAGGAGGTAGTGGAGGCGTATGCAAGGGTGGAAAAAGTAGAGGGCTTG
CATCGGCAGGTGGTGGAGGACTTGAAGCGGCTGGAGGATGTCCGGGGGAT
AGGATGGGAGGGGATGAAGAAGGCGGGGAGAGTGCGGACACATGAGCGTG
TGGGAGGGGAAGAAGGGGACGGGGAAGAGGGGGAGGAGAGGGAAGGAGAA
TACGACGGCGAGGAAGAAGCAGTCCAGGAGGAGGAAGTAGAAAAAGACGA
GGAAGAAGGAGGAGAAGAAGACAACCACCACGACCACCAACAACACCAAC
GCTCCCTCCTTGGACGCGTCGTTTCCGCCTACGCCCGCATCTGGGTCCCC
AAAGCATTTCAACGCCCCACCGAGGAAGAACAAGCCCTGTGGGCTCTCAA
TCGGACAGTGGCCCGCCTGCGTGAAAACGGCAGTGCATTGCGCGAGATGC
TTGAAAGCCGTAATAATCTGGTGGATGAGTTGCACTCACGGATAGAGGGG
TACGAAGAAGAGGGAGAGCGTCGTCGAAAAACTGTCCGTTGTCTGCGCGA
GGCCCTGGCGGAGCTCACGGAAGAGGTGAATGCCAAGAATGAAGAGGCGG
GAGCGTTGAGACAGGAACTTAAAGGCGTAGTGCAGGAATTTTTGTGGAAA
GACGCGAATCTCACTTCATTAACCACGCGGGCAAAGGTGGGGGAGGCACG
CGTCCAGGACCTGGAAGCAGAGCTTGCGAGGGTGGAGGGGGAGAAAGCGC
AGGCCATGGCGAAAGTCGTGAGTTTGAATGCGAAGTTGGCCGAGGCGGAG
GGAAATGTGGAAGCGTTGAAGGAGGAAATGGGGCAGGTTAGGGGGGCAGC
GAAGGAGCAGGAGGAGAGGATCGTGCTGCTGGAGGAGGAAAGGAGGGCAG
TGAGCGAGCAGTTGCGGGAGGCCGTAGCGACAGGGGCAGCAGCGTCGGAT
AAGGCACAGGAGTTGTATAGGGAGAGGGATCTGTTGCGAGCTACGATAAA
GGCGGCGGAGGAGGAAAAAAGGGCGAAAGAGGAGGAGGAGAGGAGAAGGA
GGGAAGAATGGGAGGCGGCGGAGGAGGAAAGGAGGAAAATGGAGGAAGAA
CGGATGATCGCGGAGGTGGAGGAGAGGAGAAGGAGGGAGGAAGAGAGGGA
GGAGGACATTGGGAGACAAAGAGCTGCAGCGGAGGTCCAGATGACTGCTG
CTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGATGCT
GCTGTTGCTTCTGGTGCTGCTACTGGGGGAGACGATGCGCTTTTTGAATC
CCATCCTCCACCTTCCGCGCACCTCCCTCCTTTTCCTTTGACGGGTCATG
AGCCCGAGCAGCAGCAGCAGGGACATAAATCAATACCGCAGCATTTGTCT
CAGTCGAGGAAAGTAGAGCGCTGTTGGTGGTATCGAATTTGGGGAGGCCA
TCGACCATTGGCTTGGCCATCTGCAGCATCAAGGAAATAATAGATTTGAC
AGGAATGAAAAAAAGAAAGCGAAAGAGGAAGGATGGAAATGAACTTGTGT
GTATGTGTGTGTACGTGTGTGTATGTGTGTGTAAGAGTGAGTGTGAGAGA
GAGGGAGCGAGAGAGAGAGTGAGAGAGAGAGAGAAAGAGAGAGAGAGAGA
GAAAAAGAGAGTGAGAAAGAAAAAGAGAGTGTGTGAGAGAGAGAATGATA
GATAGATAGAGATATTTCAAGACCAGCTTAGCAGCAACAACGAGAAGAAC
CAAAGTAAGCGTATATTAGCATTCACGTCAAAAGCCAGGACAGATTTCTA
CTATATGTCTATCTGGTTCGGTGGGAAAGTGTGTTAACTGAAAGTCCCGT
TTTCCTAACTTCTTATTTGCTCTCGTATACTTGCGTTTCCATGATCTGCA
TCTACTGCACACATCGTTTTTGTTCCCGCTGTTTTTGGTGGTTGCTCTTA
TCTCGTCGTCGTTGCCGTAAACGCTATCTTCCGTCCGTCCCTCCCTCCCT
TCCTCCCTTCCCCTTACACTGTTCAGTGTGACTGCTTTGATATATGCTTG
TCTTATCTTTTCGACTACTATCACTACCACCACCACTGTAATAAGAATAA
CAACAAGTACTACAACTACAACAACAACGTCTACTACCACAACTGCCGCT
GCCCCTGGTTGTGGAGTATCCTTCTAAAACGCACACACGCGCTGGTACAC
GATACGAATTCAATACAGATAGATGCCCGTCCTCGTCAAACACTTCCTTA
TACTAGTTCATTACCCCCTTCTATTGCGGACGTGTTCTCGTCCCCCCTAA
ACCACCTCCCGAGCTAATATAAAAAACACTGCTCTTTTTTACACCTGTCT
TCGTAACTCTCCTTTTTCCTGAGAGTGAAAAATGCACCCCGTCGTCTTTT
TTCCGATTCACTTGATCTATGCGAAGCAAAGAGTACTGCCGGCTTCCTCC
TGCCTCCTCATTCATTTTCTCCACACCGGTCTCACCGTATCTCTTTTCAG
ATATGCCTGCCTCGCCTCCTCTTACGGAGCGGCACGCACCCAGACCCACA
CGCACTCTTTGTCACATAATCAACAGATATACACACGCACTACATGATCC
ATCACTACGTATTCCCTCAATGTAAGGGAACAAGTGTGACGTTTAAAAGC
CAAAAATGAAGGTCCCGCCTCTGTCTCCCCCTCCCTCCTCACCCCTTTCC
CCGCTTCGACAAAAGGGAAGAAGGGACAGAGCAATATACGACACGCCTTT
TACCCATGTTCCCTTCCTCGTCGTCATCCCTAAAAATAAGCCTGGAACCT
CCCCGAACAATGCAACAAACTCATCATATACAGCATGGCAGGGTAGTACC
GCCCCTTTCCCTCCGGCATGTCCTGCTCCCACAATTCCTTCACAAATGAA
GACATCAACTTTTCATCTTTCGTCGCCAATGCCACCACCGCATTCATGCT
CACAAGACCCGCATCATGCCCTGAGTTGTTGTCGGCAAGCTTCCCATCCA
TTGTGAATTGACTCCCGTACTTCGGTCCTTGACTTGCAAAAAAACCCAAG
AAACGATCTGCATACTTCTGTTGCCACCCGTCCATGTTCCACCACGCCCA
GTCCACTGCCACATTTGCCGGGGCTCTCCACGCATCCCACTGAAAATTAC
TATGCCCCTCCAAATTAGGATCCGACGCTCCCTTCCCTTCCAACGTGGTG
TAGTCAGGAATGAGCCCCGTTTTGGGATCAGCGGCCACGTGGAAGAACTT
CCGGCTTTGCATCGCGGACTTGGACCAGAACTTGGCCGCGCGTGGGTCGC
CTTCATTTTTGAGGAATCGGGCGAAAGCTTCGTAGAAGTGGGGGAGGTGG
TATGACGGGTTGGAGTGCCTGAGCCCCCAGTCAGTCGGGTTGAAGGTGGC
TTTCCCGTCTTTGGTGAAAAAGCCTTTTTTCGAGTTTCCCATGGCGTGGA
TGAGGCGCATTGCTTCCGCTTTGTATGGATACCCAATGCTGGAGCCCCAT
TTCCGATGTGCTGCTATGAGAGCTGTTGCAATGTAAGCTTCTGCGTCCGG
GGCGGGGACCACGTCTTTCGCATCGATGAGTAGGCCACCGCGCGTGACAC
GCCAGGCGAAAAATGTCTCGTACGTGCCCGCCGTGTGCTGCATGTGAAAG
CGGGCCCAGTTCCACAGCCGGTTGAACGCCTCCTGCTTCTGTAAATGTAC
ACACGTTATCATCCCATAGCTGATCCCCTCAGAAGTCACCACATTACTCT
CCGTATTAATAATCTGAGCCATGTTTGGTTCCACTTCAACATACAACCCT
GTCTTTTCGATATCCCCCTTGAAATAGTTGTCCCATACCCCCTCCAATTT
CGTGTCCGTCTCAACAATAGACTTATCCATCACCTCTGTGAAGAGATTCC
TATAAATGCCCGTCCCCGCCGCGCCGTCATCCCCCCCAGGGCCAAGGGCT
TCGATGCCTGTCCGCCTTGCCGCTGAAATGACAATGCCGATCAGGAAAAG
AAGGACGGCCACAGTAAGCATCAGGCACAGCGCTTGCTGTCGACGCGTCA
ATTTGCGAGGATTCAGAAACGGAGGCAAGTTGTCCATCCACCCTTTCGGT
GGCTCTCGTCGGTGAGGGAGGATTTTGTACGAATCCTTGGAAAAAAAACC
GGGGTGCCCCCCTAATCCAAACGCGTCCTCCCCCCCTGCTTGCCCTGATT
CGACGTTAAAAGGCAGAATGTCGTCATCTCCACCATTGTCGGTGAAGGAG
GAGGTAGCCAAGGGGTCGGCACGCCGAAATGAATGGAAACGGGGGTCCAA
TCGAGAATTGGCGGTGGGAAGACTGCCGTCTGTAGTATTGGAGGTAGGGG
TGTGTGGACGGAGGGGCTTGGGAGGACGAGGAGAATGAACGCTTCTGTTG
GTGCTGCTGGTTTTCCCTTTAAAAGATGCAGCGGCAATGGCAGCCGCAGC
AGTGGCTGACCAGATGGAGGAGGGGCCATGTGCTGAAATGGAGGAGATGG
AGGAGGTGGAGGTTAAGTCCGAGGAAGGTGACGACTTACGACCAGGCGAA
GCCCTCCCGCCCATGACTGCGGCTGCTTTCACTGAGGATGTGGCAGGAAG
TGTAGAGGGGATGGAATCGGCTGGTATTATGCCCTTCGTGTGTTTGCGAA
AAGAGTTCTCGGTAAAAGCGGAGGTGTTGGGGGCAGCATTGGCTGCGGCT
GGGCCATTTTCGCGGGGGACGCGCCAAGGACTGCTTCTGACGTCTGTGTT
GAAAGGCTTATTGTAGCATAGGGTAAAAAGGACGGGGGGAGGGGAGTATG
GGGACTTAGTAGATGGTCTAGAGGGGAGGTCACCTAATTACGGACCCGTG
GGGAGGTGGGGGGGGGGAGAAGCTGGCAGACAGCCAAGAAAGGGAAAAGC
AAGCACGTGGCATGACAGCAGACAAGTTCAGCCTGCTTGTTAACGCACAC
ATGCAGCCAAGCTCCGGTCAAGCACACCCAAAGGCGAAAATAGTGTGCCT
GTAGAAGATGCCTAGAGTAAACTTTGGGGCCAACGTTTGTTCCGGAATAA
AGCGGGGGTGGACATTGCCAACTACACTCCACAGTGCACTCTCGTCTCCT
TCACGCGTCTCTTCCCCGCCTTTCCCTCCAGGCATGCCGGCGTGCGCACG
GTCAAGCCTTTGGAAACCGTCTGGACGTGCCGCTCGACGGGCCCTGCAAG
AAAGGACAAATCTTCGCTCCTATTGACGTCGACTTGGTCGGAGACCGCCA
CTTTCCCCAATACACGTTAAGGCAATCTCGTTCATGTGTCCTTTGCGGTA
TGTACTTACATAGTCGATGTCGTCGGTGGCAGAGGCCACCAGGTTGCGAC
CCATTGCCCCCCAGCTCGTCAAGAGATCCGCGCGCCTCTCCTGGCTTCGG
GAACTGCTGGTCTTGAAGGAACTTGCCCGGCTTGTAAAAGCGCGCCTTCC
T

Coding sequence (CDS) from alignment at scaffold_4:556213..562163-

>mRNA_2011 ID=mRNA_2011|Name=jgi.p|Nanoce1779_2|628177|organism=Nannochloropsis oceanica|type=CDS|length=3264bp|location=Sequence derived from alignment at scaffold_4:556213..562163- (Nannochloropsis oceanica)
CATCAAGGAAATAATAGATTTGACAGGAATGAAAAAAAGAAAGCGAAAGA
GGAAGGATGGAAATGAATGGAAGCAGCGGAGGAAGGGATAGAGGAAGAGT
CGGCGCCAATAGGAGATGCTGTGCCTTCCGCTGCTATCGACGACGAGCAG
CAGCAGCGGCAGCGGCAACAGGAGCAGCAGCAGCAGCAGCAGCAGTCTGT
AGTAGGAGAGTGGGAGGAAGAGAAGGCTGGATTGGTCAAGGAGAAGATGG
CGCTGACACAGGAGGTGGAAAATCTCAAGGCCCGTTTGGAAGCAGAATCA
CTCGCCAGGAGCAAGGGGGGCGAGGGAGAAGGAGAGATAGAGGGCGCGTC
GATCCTGCAAGTGAGGATAGGAGAGCTTGAGACCGAGCTAGAGAAAGCTG
AAGAGACGCTGATAAACACCGTGGGTGTGTGGAAGCACAAATTAGAGGTC
ATGACTGCAGAAAGGGATTTGCTGAAAGGTGAGGTGGGGCATTTGCATGT
GTCGGTGGAGGAGAAAGAGAAGGAGGTAGTGGAGGCGTATGCAAGGGTGG
AAAAAGTAGAGGGCTTGCATCGGCAGGTGGTGGAGGACTTGAAGCGGCTG
GAGGATGTCCGGGGGATAGGATGGGAGGGGATGAAGAAGGCGGGGAGAGT
GCGGACACATGAGCGTGTGGGAGGGGAAGAAGGGGACGGGGAAGAGGGGG
AGGAGAGGGAAGGAGAATACGACGGCGAGGAAGAAGCAGTCCAGGAGGAG
GAAGTAGAAAAAGACGAGGAAGAAGGAGGAGAAGAAGACAACCACCACGA
CCACCAACAACACCAACGCTCCCTCCTTGGACGCGTCGTTTCCGCCTACG
CCCGCATCTGGGTCCCCAAAGCATTTCAACGCCCCACCGAGGAAGAACAA
GCCCTGTGGGCTCTCAATCGGACAGTGGCCCGCCTGCGTGAAAACGGCAG
TGCATTGCGCGAGATGCTTGAAAGCCGTAATAATCTGGTGGATGAGTTGC
ACTCACGGATAGAGGGGTACGAAGAAGAGGGAGAGCGTCGTCGAAAAACT
GTCCGTTGTCTGCGCGAGGCCCTGGCGGAGCTCACGGAAGAGGTGAATGC
CAAGAATGAAGAGGCGGGAGCGTTGAGACAGGAACTTAAAGGCGTAGTGC
AGGAATTTTTGTGGAAAGACGCGAATCTCACTTCATTAACCACGCGGGCA
AAGGTGGGGGAGGCACGCGTCCAGGACCTGGAAGCAGAGCTTGCGAGGGT
GGAGGGGGAGAAAGCGCAGGCCATGGCGAAAGTCGTGAGTTTGAATGCGA
AGTTGGCCGAGGCGGAGGGAAATGTGGAAGCGTTGAAGGAGGAAATGGGG
CAGGTTAGGGGGGCAGCGAAGGAGCAGGAGGAGAGGATCGTGCTGCTGGA
GGAGGAAAGGAGGGCAGTGAGCGAGCAGTTGCGGGAGGCCGTAGCGACAG
GGGCAGCAGCGTCGGATAAGGCACAGGAGTTGTATAGGGAGAGGGATCTG
TTGCGAGCTACGATAAAGGCGGCGGAGGAGGAAAAAAGGGCGAAAGAGGA
GGAGGAGAGGAGAAGGAGGGAAGAATGGGAGGCGGCGGAGGAGGAAAGGA
GGAAAATGGAGGAAGAACGGATGATCGCGGAGCATCAAGGAAATAATAGA
TTTGACAGGAATGAAAAAAAGAAAGCGAAAGAGGAAGGATGGAAATGAAT
GGAAGCAGCGGAGGAAGGGATAGAGGAAGAGTCGGCGCCAATAGGAGATG
CTGTGCCTTCCGCTGCTATCGACGACGAGCAGCAGCAGCGGCAGCGGCAA
CAGGAGCAGCAGCAGCAGCAGCAGCAGTCTGTAGTAGGAGAGTGGGAGGA
AGAGAAGGCTGGATTGGTCAAGGAGAAGATGGCGCTGACACAGGAGGTGG
AAAATCTCAAGGCCCGTTTGGAAGCAGAATCACTCGCCAGGAGCAAGGGG
GGCGAGGGAGAAGGAGAGATAGAGGGCGCGTCGATCCTGCAAGTGAGGAT
AGGAGAGCTTGAGACCGAGCTAGAGAAAGCTGAAGAGACGCTGATAAACA
CCGTGGGTGTGTGGAAGCACAAATTAGAGGTCATGACTGCAGAAAGGGAT
TTGCTGAAAGGTGAGGTGGGGCATTTGCATGTGTCGGTGGAGGAGAAAGA
GAAGGAGGTAGTGGAGGCGTATGCAAGGGTGGAAAAAGTAGAGGGCTTGC
ATCGGCAGGTGGTGGAGGACTTGAAGCGGCTGGAGGATGTCCGGGGGATA
GGATGGGAGGGGATGAAGAAGGCGGGGAGAGTGCGGACACATGAGCGTGT
GGGAGGGGAAGAAGGGGACGGGGAAGAGGGGGAGGAGAGGGAAGGAGAAT
ACGACGGCGAGGAAGAAGCAGTCCAGGAGGAGGAAGTAGAAAAAGACGAG
GAAGAAGGAGGAGAAGAAGACAACCACCACGACCACCAACAACACCAACG
CTCCCTCCTTGGACGCGTCGTTTCCGCCTACGCCCGCATCTGGGTCCCCA
AAGCATTTCAACGCCCCACCGAGGAAGAACAAGCCCTGTGGGCTCTCAAT
CGGACAGTGGCCCGCCTGCGTGAAAACGGCAGTGCATTGCGCGAGATGCT
TGAAAGCCGTAATAATCTGGTGGATGAGTTGCACTCACGGATAGAGGGGT
ACGAAGAAGAGGGAGAGCGTCGTCGAAAAACTGTCCGTTGTCTGCGCGAG
GCCCTGGCGGAGCTCACGGAAGAGGTGAATGCCAAGAATGAAGAGGCGGG
AGCGTTGAGACAGGAACTTAAAGGCGTAGTGCAGGAATTTTTGTGGAAAG
ACGCGAATCTCACTTCATTAACCACGCGGGCAAAGGTGGGGGAGGCACGC
GTCCAGGACCTGGAAGCAGAGCTTGCGAGGGTGGAGGGGGAGAAAGCGCA
GGCCATGGCGAAAGTCGTGAGTTTGAATGCGAAGTTGGCCGAGGCGGAGG
GAAATGTGGAAGCGTTGAAGGAGGAAATGGGGCAGGTTAGGGGGGCAGCG
AAGGAGCAGGAGGAGAGGATCGTGCTGCTGGAGGAGGAAAGGAGGGCAGT
GAGCGAGCAGTTGCGGGAGGCCGTAGCGACAGGGGCAGCAGCGTCGGATA
AGGCACAGGAGTTGTATAGGGAGAGGGATCTGTTGCGAGCTACGATAAAG
GCGGCGGAGGAGGAAAAAAGGGCGAAAGAGGAGGAGGAGAGGAGAAGGAG
GGAAGAATGGGAGGCGGCGGAGGAGGAAAGGAGGAAAATGGAGGAAGAAC
GGATGATCGCGGAG

Synonyms

Publications