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Properties
| Property Name | Value |
|---|
| TranscriptId | 537939 |
| Track | FilteredModels2 |
| ProteinId | 537853 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_4 | supercontig | scaffold_4:170676..172102 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_1849 ID=mRNA_1849|Name=jgi.p|Nanoce1779_2|537853|organism=Nannochloropsis oceanica|type=mRNA|length=1427bp
CTTCTTTCCTCCTTTTCTCTCTGTTTTCTGTTCGTTAGCATCCTTCTCGC
TTCTTCCACCTCTCACACCCTGACTCATTGACGTCCGAAATTAGCGGCAA
GAGAAATATACCGTCTGCACGTGCGTCACTTTCCGCGCTCACCTTTCCCA
CACCCTATCTCCCCCTTCCTCACCCTCCCTCCCCCGACACTACAACCATC
CCACACCACATCCCACAGACACTCCCACACACAACACCCTCATGTCCTAC
GGCGGCTACGAATACGGCGCACCCACAGACGCTTACGGTGGCGGGGGCGG
GGGAGGCTTCATGCCCGGCCATGGCGACTTTCAGGGCGGGGCGATGGGCT
TTGGGTCTCCCGACGCGGGCGCGGGCGGTGGCGGCAAGGTGAGTAAGGAG
CAAAAGACACTGCTGCCTTTGACGGTCCACCAGCTCTTGAACGCGGGGCA
GGACGAGCCGGACGCGCCGACATTCACGGTGGATGGATGTGATTTGCACC
AGGTGAAGATCGTGGGGCAAGTGCTGGAGATTGTCGAGACAGCGACGATG
CGGGCCTACAAGGTGGATGACGGGACTGGAGTGTTGAGCTGCCGTGTGTT
TGTCGAGCAAGACGAGACGGAATATGCACAGGAACGACGGAGCTACTGTC
AGAAAGGCTCTTACATTCGTGTGGTGGGCCAGCTGAGGGAGTACCAGGGA
CAGAGGCATTTGAGTGTGCATGACATGCGGGTAGTGAAGGACGGGAACGA
GATTACGCACCACTTGCTTGAAGTCATTTGGGTGCACTGTCAGAACACTA
AGGGGAGGATGCAGAAGCCTGGGGCGGTAGGGGTGATGGGAATGGGCTTG
GGGAACATGGCGGGAGGAATGATGGGTGGGTATGGACAGAAGATGATGGG
AGGGGGAGTAGGGGGAGGAATGAGCAACCTGAACCAAGCGGTGTTGGACG
CGTTCATGGAGCATAATGATGGGGATGTGGGCGCGGATCTGGCGACTGTG
ATTCGGTCATTATCTACGCGGAACATCACCCCGCAGCAGGTGCAGCAGGC
GGTTGATTTCCTGGCGCAGGAGGGGCAGCTGTACACGACGACGGATGAGA
ACCACTACAAGGCCACTTAGAGGGAGGGGAGGGGGGAGGGCGGAAGGGGC
TGCAGTGGTAGTGGTGGGAGCTTGGTTGGGCGGGAAAAGGTGGGTGAGTG
CGAAGAGCAAGCAGGAAGGCGAAGGCAGGATCCGAGAAGGGGGAGAAGGA
AGATGTTTACCTGTGTCCATGTACGTGTGTGGAGACAGAGGATGGAGGGG
GGGAAATGATGTGAAGGGGAGAGGCAACAAAAAGAAATCATGAACAGTGG
TAGCAACCCCAATGACAACAGAAGCAGCAACGGCGAAATTCCTGCCAAAA
GAAAGATATGAAAACCCAAAACGAGAG back to topprotein sequence of jgi.p|Nanoce1779_2|537853 >mRNA_1849-protein ID=mRNA_1849-protein|Name=jgi.p|Nanoce1779_2|537853|organism=Nannochloropsis oceanica|type=polypeptide|length=293bp
MSYGGYEYGAPTDAYGGGGGGGFMPGHGDFQGGAMGFGSPDAGAGGGGKV
SKEQKTLLPLTVHQLLNAGQDEPDAPTFTVDGCDLHQVKIVGQVLEIVET
ATMRAYKVDDGTGVLSCRVFVEQDETEYAQERRSYCQKGSYIRVVGQLRE
YQGQRHLSVHDMRVVKDGNEITHHLLEVIWVHCQNTKGRMQKPGAVGVMG
MGLGNMAGGMMGGYGQKMMGGGVGGGMSNLNQAVLDAFMEHNDGDVGADL
ATVIRSLSTRNITPQQVQQAVDFLAQEGQLYTTTDENHYKAT* back to topmRNA from alignment at scaffold_4:170676..172102- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_1849 ID=mRNA_1849|Name=jgi.p|Nanoce1779_2|537853|organism=Nannochloropsis oceanica|type=mRNA|length=1427bp|location=Sequence derived from alignment at scaffold_4:170676..172102- (Nannochloropsis oceanica)
CTTCTTTCCTCCTTTTCTCTCTGTTTTCTGTTCGTTAGCATCCTTCTCGC
TTCTTCCACCTCTCACACCCTGACTCATTGACGTCCGAAATTAGCGGCAA
GAGAAATATACCGTCTGCACGTGCGTCACTTTCCGCGCTCACCTTTCCCA
CACCCTATCTCCCCCTTCCTCACCCTCCCTCCCCCGACACTACAACCATC
CCACACCACATCCCACAGACACTCCCACACACAACACCCTCATGTCCTAC
GGCGGCTACGAATACGGCGCACCCACAGACGCTTACGGTGGCGGGGGCGG
GGGAGGCTTCATGCCCGGCCATGGCGACTTTCAGGGCGGGGCGATGGGCT
TTGGGTCTCCCGACGCGGGCGCGGGCGGTGGCGGCAAGGTGAGTAAGGAG
CAAAAGACACTGCTGCCTTTGACGGTCCACCAGCTCTTGAACGCGGGGCA
GGACGAGCCGGACGCGCCGACATTCACGGTGGATGGATGTGATTTGCACC
AGGTGAAGATCGTGGGGCAAGTGCTGGAGATTGTCGAGACAGCGACGATG
CGGGCCTACAAGGTGGATGACGGGACTGGAGTGTTGAGCTGCCGTGTGTT
TGTCGAGCAAGACGAGACGGAATATGCACAGGAACGACGGAGCTACTGTC
AGAAAGGCTCTTACATTCGTGTGGTGGGCCAGCTGAGGGAGTACCAGGGA
CAGAGGCATTTGAGTGTGCATGACATGCGGGTAGTGAAGGACGGGAACGA
GATTACGCACCACTTGCTTGAAGTCATTTGGGTGCACTGTCAGAACACTA
AGGGGAGGATGCAGAAGCCTGGGGCGGTAGGGGTGATGGGAATGGGCTTG
GGGAACATGGCGGGAGGAATGATGGGTGGGTATGGACAGAAGATGATGGG
AGGGGGAGTAGGGGGAGGAATGAGCAACCTGAACCAAGCGGTGTTGGACG
CGTTCATGGAGCATAATGATGGGGATGTGGGCGCGGATCTGGCGACTGTG
ATTCGGTCATTATCTACGCGGAACATCACCCCGCAGCAGGTGCAGCAGGC
GGTTGATTTCCTGGCGCAGGAGGGGCAGCTGTACACGACGACGGATGAGA
ACCACTACAAGGCCACTTAGAGGGAGGGGAGGGGGGAGGGCGGAAGGGGC
TGCAGTGGTAGTGGTGGGAGCTTGGTTGGGCGGGAAAAGGTGGGTGAGTG
CGAAGAGCAAGCAGGAAGGCGAAGGCAGGATCCGAGAAGGGGGAGAAGGA
AGATGTTTACCTGTGTCCATGTACGTGTGTGGAGACAGAGGATGGAGGGG
GGGAAATGATGTGAAGGGGAGAGGCAACAAAAAGAAATCATGAACAGTGG
TAGCAACCCCAATGACAACAGAAGCAGCAACGGCGAAATTCCTGCCAAAA
GAAAGATATGAAAACCCAAAACGAGAG back to topCoding sequence (CDS) from alignment at scaffold_4:170676..172102- >mRNA_1849 ID=mRNA_1849|Name=jgi.p|Nanoce1779_2|537853|organism=Nannochloropsis oceanica|type=CDS|length=879bp|location=Sequence derived from alignment at scaffold_4:170676..172102- (Nannochloropsis oceanica)
ATGTCCTACGGCGGCTACGAATACGGCGCACCCACAGACGCTTACGGTGG
CGGGGGCGGGGGAGGCTTCATGCCCGGCCATGGCGACTTTCAGGGCGGGG
CGATGGGCTTTGGGTCTCCCGACGCGGGCGCGGGCGGTGGCGGCAAGGTG
AGTAAGGAGCAAAAGACACTGCTGCCTTTGACGGTCCACCAGCTCTTGAA
CGCGGGGCAGGACGAGCCGGACGCGCCGACATTCACGGTGGATGGATGTG
ATTTGCACCAGGTGAAGATCGTGGGGCAAGTGCTGGAGATTGTCGAGACA
GCGACGATGCGGGCCTACAAGGTGGATGACGGGACTGGAGTGTTGAGCTG
CCGTGTGTTTGTCGAGCAAGACGAGACGGAATATGCACAGGAACGACGGA
GCTACTGTCAGAAAGGCTCTTACATTCGTGTGGTGGGCCAGCTGAGGGAG
TACCAGGGACAGAGGCATTTGAGTGTGCATGACATGCGGGTAGTGAAGGA
CGGGAACGAGATTACGCACCACTTGCTTGAAGTCATTTGGGTGCACTGTC
AGAACACTAAGGGGAGGATGCAGAAGCCTGGGGCGGTAGGGGTGATGGGA
ATGGGCTTGGGGAACATGGCGGGAGGAATGATGGGTGGGTATGGACAGAA
GATGATGGGAGGGGGAGTAGGGGGAGGAATGAGCAACCTGAACCAAGCGG
TGTTGGACGCGTTCATGGAGCATAATGATGGGGATGTGGGCGCGGATCTG
GCGACTGTGATTCGGTCATTATCTACGCGGAACATCACCCCGCAGCAGGT
GCAGCAGGCGGTTGATTTCCTGGCGCAGGAGGGGCAGCTGTACACGACGA
CGGATGAGAACCACTACAAGGCCACTTAG back to top
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