NO29G00140.1, NO29G00140.1 (mRNA) Nannochloropsis oceanica | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	NO29G00140.1
Unique Name	NO29G00140.1
Type	mRNA
Organism	Nannochloropsis oceanica (N. oceanica IMET1)
Sequence length	2498
Alignment location	chr29:55382..61001 -

Link to JBrowse

Properties

Mutants

Expression

No biomaterial libraries express this feature.

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
chr29	genome	chr29:55382..61001 -

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Gene prediction for N. oceanica IMET1	2017-10-24
Homology annotation for N. oceanica IMET1	2017-10-25
InterPro analysis for N. oceanica IMET1	2017-10-25

Annotated Terms

Homology

[Close]

BLAST of NO29G00140.1 vs.
Match: EWM21231.1 (beta-lactamase [Nannochloropsis gaditana])

HSP 1 Score: 487.6 bits (1254), Expect = 4.900e-134
Identity = 234/294 (79.59%), Postives = 261/294 (88.78%), Query Frame = 0

Query:   58 SEPDVEGVWVDATSNAKAWLDSGNSLPFPVAVSPETVGMSSAHLGEADNRIEALVQQKKIAGASFSVMRNGQIVTMQTHGYSNVETEQPILADTIFRIFSQSKPINTAAFLTLIDDGLVEYTDPVSLYIPEFANLKVWDPIINGTVPLDRPVTIWHLLTHTSGLTYGFMDNTHVDQLYNQNDILNPNEDLATKIKRVTKLPLTCQPGSKWQYGLSTDVLLLIASLVTGLPVDEFLRSRLLEPLGMKDTGFYVPLWKAHKLATVYERNATTNTIHRPKPDPHNIQLVDYTKRPAY 352
            ++ D+EG+W  AT+ AKAWLDSGNSLPFPVA SPE+V MSS HL EA  RI +LV+  KI GASFSVM++G+IVTMQT+GY+NVETEQPI ADTIFRIFSQSKPI+TAAFLTLID+GLV Y DPVSLYIPEFA +KV+DPI    V L+RP+TIWHLLTHTSGLTYGFMDNTHVDQLYN+NDILNP+EDLATKIKRV KLPLTCQPG+KWQYGLSTDVLLLIASLVTGLP+DEFL+ RLLEPLGM DTGFYVPL+ AHKLA VY+RN T  TIHRP PDPHNIQLVDYTKRP +
Sbjct:   20 AQGDLEGIWQGATTAAKAWLDSGNSLPFPVAFSPESVEMSSVHLEEAHTRIASLVEDSKIGGASFSVMKDGEIVTMQTYGYANVETEQPIRADTIFRIFSQSKPISTAAFLTLIDEGLVSYNDPVSLYIPEFATMKVYDPITGTNVALERPITIWHLLTHTSGLTYGFMDNTHVDQLYNKNDILNPDEDLATKIKRVAKLPLTCQPGTKWQYGLSTDVLLLIASLVTGLPIDEFLQRRLLEPLGMTDTGFYVPLYNAHKLAIVYQRNMTDGTIHRPPPDPHNIQLVDYTKRPKH 313

The following BLAST results are available for this feature:

BLAST of NO29G00140.1 vs.

BLAST of NO29G00140.1 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 1


Match Name	E-value	Identity	Description
EWM21231.1	4.900e-134	79.59	beta-lactamase [Nannochloropsis gaditana]	[more]

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
NO29G00140	NO29G00140	Nannochloropsis oceanica (N. oceanica IMET1)	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
NO29G00140.1	NO29G00140.1-protein	Nannochloropsis oceanica (N. oceanica IMET1)	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
NO29G00140.1.cds1	NO29G00140.1.cds1	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO29G00140.1.cds2	NO29G00140.1.cds2	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO29G00140.1.cds3	NO29G00140.1.cds3	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO29G00140.1.cds4	NO29G00140.1.cds4	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO29G00140.1.cds5	NO29G00140.1.cds5	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO29G00140.1.cds6	NO29G00140.1.cds6	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO29G00140.1.cds7	NO29G00140.1.cds7	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO29G00140.1.cds8	NO29G00140.1.cds8	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO29G00140.1.cds9	NO29G00140.1.cds9	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO29G00140.1.cds10	NO29G00140.1.cds10	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO29G00140.1.cds11	NO29G00140.1.cds11	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO29G00140.1.cds12	NO29G00140.1.cds12	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO29G00140.1.cds13	NO29G00140.1.cds13	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO29G00140.1.cds14	NO29G00140.1.cds14	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO29G00140.1.cds15	NO29G00140.1.cds15	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO29G00140.1.cds16	NO29G00140.1.cds16	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO29G00140.1.cds17	NO29G00140.1.cds17	Nannochloropsis oceanica (N. oceanica IMET1)	CDS

Sequences

The following sequences are available for this feature:

mRNA sequence
protein sequence
mRNA from alignment at chr29:55382..61001-
coding sequence from alignment at chr29:55382..61001-

mRNA sequence

>NO29G00140.1 ID=NO29G00140.1|Name=NO29G00140.1|organism=Nannochloropsis oceanica|type=mRNA|length=2498bp
GTGCGTCACTTCCGCCGCTTCCTCGGCATCCATCGCTTGCTCGTTGCGAC
CTCACAGTCCCCCGCAGGTTAACACACCTGCACGCTTTTGGAAGATTATC
ATAATATCTTGTGTTTTGCGTAGTACAGCGCACGTTTATTTTTATGTGGG
AGACTCTTCATGGTTTGGTTCACGACAATCTCCCATCCCTTTTCCCCAGC
CCTTTTGATCCATCATAGACCGAGCCTACGGGTTCCCCCTATCACCAGCA
TCTCCTCTCTACTCGCTGTCTGAGGTTCTGGTTGATCCTCTTTGTATTAA
CTTTATTGACATTCCCTCTACATGTGCTTGCCTTCGATTGTGCACAATGC
CTAGCACTACACTTTGCTTCGGCCACCTCCACCTCTCTGGTCTCGTTTGT
TGGCTGGTCGCCCTCTATGGCTGCACTGACTCCCCATCTACCTTCGATTC
TCACCGATTTTCTTCTTTCCCCGCTTTCCACTCATTGCACAGGAAGAAGA
ATGCGTCTTCCTCAACTCTCCTGCCTCGTCCTCCCTCTCGTTTCCCTCCC
CGCCCTTCAACTCGTCCATGCTCAGGACCAATCGCCCTCCGAGCCCGACG
TGGAGGGTGTGTGGGTTGATGCCACAAGCAACGCCAAGGCCTGGCTTGAC
AGCGGTAATTCCCTCCCCTTCCCCGTGGCGGTCTCTCCCGAGACCGTAGG
CATGTCCAGCGCCCATTTGGGAGAGGCGGATAACAGAATCGAGGCCCTTG
TCCAACAAAAGAAAATCGCTGGGGCATCTTTTTCGGTGATGCGAAACGGG
CAGATCGTGACGATGCAGACACACGGCTACTCCAACGTGGAGACCGAGCA
GCCCATCTTGGCGGACACGATTTTCCGGATCTTCTCCCAATCCAAGCCCA
TCAATACGGCTGCCTTCCTCACCTTGATTGACGACGGCCTGGTGGAGTAC
ACAGATCCCGTCTCGCTCTACATTCCTGAGTTTGCCAACCTCAAGGTCTG
GGATCCCATTATCAACGGCACGGTGCCCTTGGATCGGCCTGTCACGATCT
GGCACCTGCTGACACACACCTCGGGCCTGACGTATGGCTTCATGGACAAC
ACTCACGTGGACCAGCTATACAACCAAAACGACATCCTGAACCCCAACGA
GGACCTCGCCACCAAGATCAAACGCGTGACGAAGCTGCCCCTGACCTGCC
AGCCGGGCTCCAAGTGGCAGTACGGCCTGAGCACCGACGTCCTCCTTCTG
ATTGCCTCCCTCGTCACGGGCCTTCCTGTCGATGAGTTCCTACGGAGCCG
CCTGCTCGAGCCCCTGGGAATGAAAGACACCGGCTTCTACGTCCCCCTGT
GGAAAGCCCACAAGCTGGCCACTGTGTACGAGCGCAATGCCACCACAAAC
ACCATCCATCGACCCAAGCCGGACCCCCACAATATCCAGCTGGTAGACTA
CACGAAACGACCTGCCTACCTCGCCGGAGGCAGTGGTCTCGTGTCCTCTA
TGACGGACATGATGAAGTTTGGACAGATGCTGCTCAATAAAGGCGAGCTG
AACGGCGTGCGTGTCCTGAGCGAGAAGACGGCCACTGCCATGGTCTCCCC
GCAGCTCGGGAAGGAGTTTTATCCTCTGGCCTACAACCCCAACATCCTCA
TGTCCGACATCTCCTTCGGCTATGGCATCGGTGTGCAAATCCCGTATGCG
GAGGATGCGCGCTCCAACATGGTGCTGGCCTATGGCGTGCCTCGCTTGGG
AGAGTTCTCGTGGGGCGGGGGCATGAGCACGAATTTTTGGGTCTCGCCGC
AGGACAAAACGGTCATTGTGACCATGGTGCAGATCATGCCCTACACGCAA
GACCTGAAATTCGCGGCGCGTGAATGGACCTACCGCTCTATTGATGCCTT
TGACATGAAGCAACAGGCGCGAACGGCCAAACCCTTCGTGGTGGCCTCCG
TGGATGCCGCGTCTGGCTCAGCAGCAGTGATAAAGGAGGGAGGGAAGGAG
GTAGAGGGGAAGAAACGCGGCCTGCGCAGCAGCAGCAGCAAAGCATAAAG
TCATGCAAAGGAGGAGAAACACCGGAGGAAGAGAGCAAGTGAGCAAAGGA
TGGGAAGGATGCAAAATATACTCAAATCGATGGAGAATTGAGACCGAAGC
GGAGAGAGAGGTAAAAAAGGAGGAAGTGCGGAAGAGAAGGAGGAAGGCCA
GCAGAGAGGGAAAGGATTCGCTGTGTCATAAGAGGCGACGTATTTTTCAG
CATATGCGTGCCTGCTTGTTGAATGGATAAGAAGGGAAGAGAGCAAGAGA
GGCCTATCGGCCATGGGGGGGAGGCAGTGGAGGTACGAGGGGCCGACAGA
GGGAAGGGAAGGAAGGGGGGTGGAAGGGAGTCAATCACACACCATCGTCA
TAACCACCATCACCATCATCAATATCATCGTCAACAACTACAACATTATG
GGTGGACCACACATGAAGAGAGGAAGAATGAACGATTAGGATACTGAG

protein sequence of NO29G00140.1

>NO29G00140.1-protein ID=NO29G00140.1-protein|Name=NO29G00140.1|organism=Nannochloropsis oceanica|type=polypeptide|length=544bp
MAALTPHLPSILTDFLLSPLSTHCTGRRMRLPQLSCLVLPLVSLPALQLV
HAQDQSPSEPDVEGVWVDATSNAKAWLDSGNSLPFPVAVSPETVGMSSAH
LGEADNRIEALVQQKKIAGASFSVMRNGQIVTMQTHGYSNVETEQPILAD
TIFRIFSQSKPINTAAFLTLIDDGLVEYTDPVSLYIPEFANLKVWDPIIN
GTVPLDRPVTIWHLLTHTSGLTYGFMDNTHVDQLYNQNDILNPNEDLATK
IKRVTKLPLTCQPGSKWQYGLSTDVLLLIASLVTGLPVDEFLRSRLLEPL
GMKDTGFYVPLWKAHKLATVYERNATTNTIHRPKPDPHNIQLVDYTKRPA
YLAGGSGLVSSMTDMMKFGQMLLNKGELNGVRVLSEKTATAMVSPQLGKE
FYPLAYNPNILMSDISFGYGIGVQIPYAEDARSNMVLAYGVPRLGEFSWG
GGMSTNFWVSPQDKTVIVTMVQIMPYTQDLKFAAREWTYRSIDAFDMKQQ
ARTAKPFVVASVDAASGSAAVIKEGGKEVEGKKRGLRSSSSKA*

mRNA from alignment at chr29:55382..61001-

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>NO29G00140.1 ID=NO29G00140.1|Name=NO29G00140.1|organism=Nannochloropsis oceanica|type=mRNA|length=5620bp|location=Sequence derived from alignment at chr29:55382..61001- (Nannochloropsis oceanica)
GTGCGTCACTTCCGCCGCTTCCTCGGCATCCATCGCTTGCTCGTTGCGAC
CTCACAGTCCCCCGCAGGTTAACACACCTGCACGCTTTTGGAAGATTATC
ATAATATCTTGTGTTTTGCGTAGTACAGCGCACGTTTATTTTTATGTGGG
AGACTCTTCATGGTTTGGTTCACGACAATCTCCCATCCCTTTTCCCCAGC
CCTTTTGATCCATCATAGACCGAGCCTACGGGTTCCCCCTATCACCAGCA
TCTCCTCTCTACTCGCTGTCTGAGGTTCTGGTTGATCCTCTTTGTATTAA
CTTTATTGACATTCCCTCTACATGTGCTTGCCTTCGATTGTGCACAATGC
CTAGCACTACACTTTGCTTCGGCCACCTCCACCTCTCTGGTCTCGTTTGT
TGGCTGGTCGCCCTCTATGGCTGCACTGACTCCCCATCTACCTTCGATTC
TCACCGATTTTCTTCTTTCCCCGCTTTCCACTCATTGCACAGGAAGAAGA
ATGCGTCTTCCTCAACTCTCCTGCCTCGTCCTCCCTCTCGTTTCCCTCCC
CGCCCTTCAACTCGTCCATGCTCAGGACCAATCGCCCTCCGAGCCCGACG
TGGAGGGTGTGTGGGTTGATGCCACAAGCAACGCCAAGGCCTGGCTTGAC
AGCGGTAATTCCCTCCCCTTCCCCGTGGCGGTCTCTCCCGAGACCGTAGG
CATGTCCAGCGCCCATTTGGGAGAGGCGGATAACAGAATCGAGGCCCTTG
TCCAACAAAGTAAGTCTTCGTCAGTGAGGGAGGCAGGGATGGGGGATAAG
AGATAGGGACGAGGGAAGTAGGAGGGACACAGTAGAGTTACTGACGTCTT
CATTATCACTTGGGAAAAAGCAATGCCTGGCTCCTGGCTCGATTGTCCTC
CCCATATGACCAAATCCCGCTTCCTCCCTCCCTCCTCTCTCCCTCACTCC
CTCCAATTTCCCCCTTCCTCCCCACTATACTCAGAGAAAATCGCTGGGGC
ATCTTTTTCGGTGATGCGAAACGGGCAGATCGTGACGATGCAGACACACG
GCTACTCCAACGTGGAGACCGAGCAGCCCATCTTGGCGGTACGTCCCCTC
CCTCCCTCCCTCCCTCCCCTCCTTCCTTCCTCCCTCCCTTTCTCTTCTTT
GCTTCCTGTGGGCAGACTTCATGTTCGGTCATTCCTGATGACTAGTTGAT
CAGTTAAAATGAAGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAAGGAGG
GGATGGAGTAGACTGATGTCCACGCTCATGTAGACGTCTATTCGGGAAAA
GTCGGAGGAAGGCGGGAGGGGGGGAGGGGGGGAGGGAAGGAGGGAGGGAG
GGAAAAACGGAGGAAAAGTTGATAAAAATACGTGAAGTAAGAACTGTCAA
CTCCATTCACACACTTACTCGTCGCCCCTCCTCCCTTCGCTCCCTCCCTC
CCTCCTTCGCTCCCTCCCTCCCTTTCCTTCCACAGGACACGATTTTCCGG
ATCTTCTCCCAATCCAAGCCCATCAATACGGCTGCCTTCCTCACCTTGAT
TGACGACGTAGGGAGGGAGGGAGGGAGGGAGAGAGGGAGGGAGGGAGGGA
GGAAGGGAGGGACAAGAGGAGGAGGGTTGCAGAGGCCTGCAGATAGACGG
GAAGAGGAAGAGGAGCACACCCCTCCCCCTACATTCCCAAGTACGACAAA
CACACTCCCTACTACGTACGCCCTCAGGGCCTGGTGGAATATTCCTTACG
CACACGCCCAGCACGACAAACACCCTCGCTCACATACACGCCCCAGCACG
ACAAACACACTCACTCTCACTCACTCCCTCCCTCAGGGCCTGGTGGAGTA
CACAGATCCCGTCTCGCTCTACATTCCTGAGTTTGCCAACCTCAAGGTCT
GGGATCCCATTATGTGCGTCCCTCCCTCCCTCCCCTCCCTCCCCCTCCCT
CCCTCCCTCCCTTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTC
CCTCCCTCCCTCCCTCCCTCCCTCCCCCTCCCTCCCTCCCTCCCTCCCTC
CCTCCCTCCCTCCCTCTTTACTCCCGCCCTCCCTCCCTCCCTCAACAACG
TACTCTTCTCATTCCCTCCCTCTCCCCCTCGCTCTCTCCCTCCGTCCCTC
CTCCAGCAACGGCACGGTGCCCTTGGATCGGCCTGTCACGATCTGGCACC
TGCTGACACACACGTACGTGGAAGGGAGGGAGGGAGGGAGGGAGGGAGGA
GACAATGAAGGCGTTTGTATCACCAAGGGCTCAACCGGCTCGTCCCTCTC
TCCCTCCTTGCCTTCTTCTCTCCCTCCCTCAGCTCGGGCCTGACGTATGG
CTTCATGGACAACACTCACGTGGACCAGCTATACAACCAAAACGACATCC
TGAACCCCAACGAGGACCTCGGTGGGGAGGGAGGGAGGGAGGGAGGGAGG
GAGGGAGGGAGGGGGGTTTGTTCATACAATAAGGGTTCCTGGAGGTCTCT
CTAGGGAGTCTCGTGAATTTCTTCTTCCGCTGTCTTGTCTAGTGCCTTCC
CTCCCTAATCTCTTCCCTCTAATCCAGGCGCTGATATTTCTAGTCTCTTC
CCTGTCTAATCTCTAATCTGTCTTACTAATGTCTAATCTGTCGTGGCCCA
TGCACTCATCCCAGCCACCAAGATCAAACGCGTGACGAAGCTGCCCCTGA
CCTGCCAGCCGGGTACGTGCCCGCCCTCCCTCCCGCCCTCCCTCCCGCCC
TCCCTCCCGCCCTCCTTCCCTCGCTCTTTCTTTCCCCCATTCTATGTAGA
AGGAGCGCTTCCACTTCCACTCACCCTCCCGCCCTCCCTCCCGCCCTCCC
TCCCGCCCTCCCTCCCGCCCTCCCTCCCGCCCTCCCAGGCTCCAAGTGGC
AGTACGGCCTGAGCACCGACGTCCTCCTTCTGATTGCCTCCCTCGTCACG
GGCCTTCCTGTCGATGAGTTCCTACGGAGCCGCCTGCTCGGTAAGCTAGC
CAAGCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCATCCACTCT
ATCACCATCATTGATGAGATTATCCATTATCCTTGAATGAGAGCATCACC
GCCGTTGATTCTCCCCTCCCTCCCTCCCTCCCGTCCTCCCTCCATCCCTC
AGAGCCCCTGGGAATGAAAGACACCGGCTTCTACGTCCCCCTGTGGAAAG
CCCACAAGTACGTACCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCC
TCCCTTCCTCCCTCATGCCGTGTCATCTCACCTGCTCTTTTACATCCCTC
CCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTAGGCTGGCCACTGTG
TACGAGCGCAATGCCACCACAAACACCATCCATCGACCCAAGCCGGGTAA
GGAGGGAGGGAGGGAGGGAGGGAGGAAGGAAAGGAGTAAAAGAAAGAGGT
CGAATGGCTACGCCGCAAGTAACATGACATTATTCTCAATATGACATATA
TGATATGACCCTCCCTCCCTCCCTCCCTCCCTCCCAAGACCCCCACAATA
TCCAGCTGGTAGACTACACGAAACGACCTGCCTACCTCGCCGGAGGCAGT
GGTCTCGTGTCCTCTATGACGGACATGATGAAGTTTGGACAGATGCTGCT
CAATAAAGGTAAGCACGCCCTCTCTCCCTCCCTGCCTGCCTCCCTCCCTC
CCTCCCTCCTTCCCTTTCACCCGATGGGTGTGGCCGAGTTCGTTGTCTCC
TCCTTTTTAGTCTCGATGGAAGATCGAAGGAGGGAGGGAGGGAGGGAGGG
AGGGAGGGAGGAGAAGGGAGGGAGGGAGGGAGGGAGGAAAAAATGAGAGG
GGGATCTCCTCCAAAGCTGGCTCACATCTCCCTCCCTCCCTCCCTCTCTC
CCTCCCTCCTTTCCTCCCTCCTTCCCTCTCTCCCTCCAGGCGAGCTGAAC
GGCGTGCGTGTCCTGAGCGAGAAGACGGCCACTGCCATGGTCTCCCCGCA
GCTCGGGAAGGAGTTTTATCCTCTGGCCTACAACCCCAACATCCGTAGGG
AGGGAGGGGGGGAGGGAGGAAGGGAGGGAGGGGGGGATGGAAGGGGGGAT
TGAGGGAGGGAGGGAAGAAATCAGTGCCATTCAGATTTTTCACCTTTTTG
TTAACAACCCTTCCCCCCCTCCCTCCCTCCCTCTCTCCCTCCCTCAGTCA
TGTCCGACATCTCCTTCGGCTATGGCATCGGTAAGGAGGGAGGGAGGGAG
GGAGGGAGGGAGGAGAGACATTAACTCTCCTTTTGAGCAGTATGTCTGCT
CACTCACCTTATTCCTTTTTCCCTCCCTCCTTCTCTCCCTTCTTCCCTCC
CTTCCCACCTTCCTTCCTTCCTTCCTTCCTTCCTTCCCTCCCTCCCTCCC
TCCCTCCCTCCCTCCCTCCCTCCCTCCTTCCGTCCAGGTGTGCAAATCCC
GTATGCGGAGGATGCGCGCTCCAACATGGTGCTGGCCTATGTAAGGAGGG
AGGGAGGGAGGGAGGGAGGGATCGGTAACGTTGCTCGTTAGCTATATCCC
TGTCACCGTCTGATGCACTCACATACACACACCTCTTTCCCCCTCCCTCC
CTCCCTCCGTCCCTCCCTCAGGGCGTGCCTCGCTTGGGAGAGTTCTCGTG
GGGCGGGGGCATGAGCACGAATTTTTGGGTCTCGCCGCAGGACAAAACGG
TCATTGTGACCATGGTGCAGATCATGCCCTACACGCAAGGTAGGGAGGGA
GGGACGTAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGACACGGTTGAACT
TGGTTGTCATGTCCCTCCCTCCCTCCCTCCCTCCCTGCAGACCTGAAATT
CGCGGCGCGTGAATGGACCTACCGCTCTATTGATGCCTTTGACATGAAGC
AACAGGTGAGGAGGAGGGAGGGGGGAAGGAAGGGAGGAAGGGCAGGAGTG
GAAGGAGGGCTCGCCTGTGTTGCCCACTACCCAATCTCCCCTCCCTACGT
TCCATTCCTTCGTTCCTTTTCCCTCATTATCTCCCTAGGCGCGAACGGCC
AAACCCTTCGTGGTGGCCTCCGTGGATGCCGCGTCTGGCTCAGCAGCAGT
GATAAAGGAGGGAGGGAAGGAGGTAGAGGGGAAGAAACGCGGCCTGCGCA
GCAGCAGCAGCAAAGCATAAAGTCATGCAAAGGAGGAGAAACACCGGAGG
AAGAGAGCAAGTGAGCAAAGGATGGGAAGGATGCAAAATATACTCAAATC
GATGGAGAATTGAGACCGAAGCGGAGAGAGAGGTAAAAAAGGAGGAAGTG
CGGAAGAGAAGGAGGAAGGCCAGCAGAGAGGGAAAGGATTCGCTGTGTCA
TAAGAGGCGACGTATTTTTCAGCATATGCGTGCCTGCTTGTTGAATGGAT
AAGAAGGGAAGAGAGCAAGAGAGGCCTATCGGCCATGGGGGGGAGGCAGT
GGAGGTACGAGGGGCCGACAGAGGGAAGGGAAGGAAGGGGGGTGGAAGGG
AGTCAATCACACACCATCGTCATAACCACCATCACCATCATCAATATCAT
CGTCAACAACTACAACATTATGGGTGGACCACACATGAAGAGAGGAAGAA
TGAACGATTAGGATACTGAG

Coding sequence (CDS) from alignment at chr29:55382..61001-

>NO29G00140.1 ID=NO29G00140.1|Name=NO29G00140.1|organism=Nannochloropsis oceanica|type=CDS|length=1632bp|location=Sequence derived from alignment at chr29:55382..61001- (Nannochloropsis oceanica)
ATGGCTGCACTGACTCCCCATCTACCTTCGATTCTCACCGATTTTCTTCT
TTCCCCGCTTTCCACTCATTGCACAGGAAGAAGAATGCGTCTTCCTCAAC
TCTCCTGCCTCGTCCTCCCTCTCGTTTCCCTCCCCGCCCTTCAACTCGTC
CATGCTCAGGACCAATCGCCCTCCGAGCCCGACGTGGAGGGTGTGTGGGT
TGATGCCACAAGCAACGCCAAGGCCTGGCTTGACAGCGGTAATTCCCTCC
CCTTCCCCGTGGCGGTCTCTCCCGAGACCGTAGGCATGTCCAGCGCCCAT
TTGGGAGAGGCGGATAACAGAATCGAGGCCCTTGTCCAACAAAAGAAAAT
CGCTGGGGCATCTTTTTCGGTGATGCGAAACGGGCAGATCGTGACGATGC
AGACACACGGCTACTCCAACGTGGAGACCGAGCAGCCCATCTTGGCGGAC
ACGATTTTCCGGATCTTCTCCCAATCCAAGCCCATCAATACGGCTGCCTT
CCTCACCTTGATTGACGACGGCCTGGTGGAGTACACAGATCCCGTCTCGC
TCTACATTCCTGAGTTTGCCAACCTCAAGGTCTGGGATCCCATTATCAAC
GGCACGGTGCCCTTGGATCGGCCTGTCACGATCTGGCACCTGCTGACACA
CACCTCGGGCCTGACGTATGGCTTCATGGACAACACTCACGTGGACCAGC
TATACAACCAAAACGACATCCTGAACCCCAACGAGGACCTCGCCACCAAG
ATCAAACGCGTGACGAAGCTGCCCCTGACCTGCCAGCCGGGCTCCAAGTG
GCAGTACGGCCTGAGCACCGACGTCCTCCTTCTGATTGCCTCCCTCGTCA
CGGGCCTTCCTGTCGATGAGTTCCTACGGAGCCGCCTGCTCGAGCCCCTG
GGAATGAAAGACACCGGCTTCTACGTCCCCCTGTGGAAAGCCCACAAGCT
GGCCACTGTGTACGAGCGCAATGCCACCACAAACACCATCCATCGACCCA
AGCCGGACCCCCACAATATCCAGCTGGTAGACTACACGAAACGACCTGCC
TACCTCGCCGGAGGCAGTGGTCTCGTGTCCTCTATGACGGACATGATGAA
GTTTGGACAGATGCTGCTCAATAAAGGCGAGCTGAACGGCGTGCGTGTCC
TGAGCGAGAAGACGGCCACTGCCATGGTCTCCCCGCAGCTCGGGAAGGAG
TTTTATCCTCTGGCCTACAACCCCAACATCCTCATGTCCGACATCTCCTT
CGGCTATGGCATCGGTGTGCAAATCCCGTATGCGGAGGATGCGCGCTCCA
ACATGGTGCTGGCCTATGGCGTGCCTCGCTTGGGAGAGTTCTCGTGGGGC
GGGGGCATGAGCACGAATTTTTGGGTCTCGCCGCAGGACAAAACGGTCAT
TGTGACCATGGTGCAGATCATGCCCTACACGCAAGACCTGAAATTCGCGG
CGCGTGAATGGACCTACCGCTCTATTGATGCCTTTGACATGAAGCAACAG
GCGCGAACGGCCAAACCCTTCGTGGTGGCCTCCGTGGATGCCGCGTCTGG
CTCAGCAGCAGTGATAAAGGAGGGAGGGAAGGAGGTAGAGGGGAAGAAAC
GCGGCCTGCGCAGCAGCAGCAGCAAAGCATAA

Synonyms

Publications