NO27G01200.1, NO27G01200.1 (mRNA) Nannochloropsis oceanica | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	NO27G01200.1
Unique Name	NO27G01200.1
Type	mRNA
Organism	Nannochloropsis oceanica (N. oceanica IMET1)
Sequence length	3220
Alignment location	chr27:379381..384938 -

Link to JBrowse

Properties

Mutants

Expression

No biomaterial libraries express this feature.

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
chr27	genome	chr27:379381..384938 -

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Gene prediction for N. oceanica IMET1	2017-10-24
Homology annotation for N. oceanica IMET1	2017-10-25
InterPro analysis for N. oceanica IMET1	2017-10-25

Annotated Terms

Homology

[Close]

BLAST of NO27G01200.1 vs.
Match: EWM20982.1 (peroxisomal targeting signal 1 receptor, partial [Nannochloropsis gaditana])

HSP 1 Score: 436.4 bits (1121), Expect = 1.900e-118
Identity = 210/238 (88.24%), Postives = 225/238 (94.54%), Query Frame = 0

Query:  571 AENDEDKRAIACLERAVDHDPHSLPTLLALGVSYVNELDSVRALQNLKAWIEHNPKYQGLEIRVDEYSDGSLMDEVMQLMLQAHDWDQATSGPGGQGSDADVQIVLGVLYNVSHDFDSATAAFRQALLSRPSDYSLWNKLGATLANSQRSQEALPAYHRALDIKPKYARGWLNLGISHANLSSFDEAAKCYLQALRLNPEAMHIWGYLRVTFTSMERFDLVQLAGQQDPSVFDAEFGR 809
            AENDEDKRAIACLERAVD DPHSLP LLALGVSYVNELDSVRALQNLKAW+EHNPKYQGLEIRVDEYSDGSLMDEV QLMLQA DWD+AT GP GQ  DADV++VLGVLYNVSHD+DSA AAFRQAL++RPSDYSLWNKLGATLANSQRS EALPAYHRALD+KPKYARGWLNLGISHANL  ++EAA+CYL+ALRLNPEA H+WGYLRVTFTSMERFDLVQLAGQQDPS+F+AEFGR
Sbjct:    1 AENDEDKRAIACLERAVDQDPHSLPALLALGVSYVNELDSVRALQNLKAWVEHNPKYQGLEIRVDEYSDGSLMDEVTQLMLQAQDWDRATCGPEGQ--DADVEVVLGVLYNVSHDYDSAAAAFRQALVARPSDYSLWNKLGATLANSQRSDEALPAYHRALDLKPKYARGWLNLGISHANLGRYEEAARCYLRALRLNPEAGHMWGYLRVTFTSMERFDLVQLAGQQDPSLFEAEFGR 236

The following BLAST results are available for this feature:

BLAST of NO27G01200.1 vs.

BLAST of NO27G01200.1 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 1


Match Name	E-value	Identity	Description
EWM20982.1	1.900e-118	88.24	peroxisomal targeting signal 1 receptor, partial [...	[more]

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
NO27G01200	NO27G01200	Nannochloropsis oceanica (N. oceanica IMET1)	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
NO27G01200.1	NO27G01200.1-protein	Nannochloropsis oceanica (N. oceanica IMET1)	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
NO27G01200.1.cds1	NO27G01200.1.cds1	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO27G01200.1.cds2	NO27G01200.1.cds2	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO27G01200.1.cds3	NO27G01200.1.cds3	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO27G01200.1.cds4	NO27G01200.1.cds4	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO27G01200.1.cds5	NO27G01200.1.cds5	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO27G01200.1.cds6	NO27G01200.1.cds6	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO27G01200.1.cds7	NO27G01200.1.cds7	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO27G01200.1.cds8	NO27G01200.1.cds8	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO27G01200.1.cds9	NO27G01200.1.cds9	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO27G01200.1.cds10	NO27G01200.1.cds10	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO27G01200.1.cds11	NO27G01200.1.cds11	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO27G01200.1.cds12	NO27G01200.1.cds12	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO27G01200.1.cds13	NO27G01200.1.cds13	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO27G01200.1.cds14	NO27G01200.1.cds14	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO27G01200.1.cds15	NO27G01200.1.cds15	Nannochloropsis oceanica (N. oceanica IMET1)	CDS

Sequences

The following sequences are available for this feature:

mRNA sequence
protein sequence
mRNA from alignment at chr27:379381..384938-
coding sequence from alignment at chr27:379381..384938-

mRNA sequence

>NO27G01200.1 ID=NO27G01200.1|Name=NO27G01200.1|organism=Nannochloropsis oceanica|type=mRNA|length=3220bp
GCGACAACATCAGTTTTGTTGTCATGCATTCAGCTCCGCTTCGCGGCCGA
GCGTCGCCGAACGCCTGTTCGACCCCCGCCCGAGTCACACCGCCATGTCA
CCAGCCCACTGGTCACCTTCTCCTACCCCCAGCCCCACCTTCGGGATAAA
AAGGCGAAATACCACACTAGAAGGTTGCCTCGCACACCGCATCAAACAAA
AAACTTGACACGAAACACGAAAAAAACGTTAGGCTGTTCTTGGAATAATA
CAAACTAAGAAGCAACTTGCTTGATCCCTAATGGTAGATCTATCCTTCTA
AGCCCCCAAGAGCTCCACAAAACACTGTCTCAAGTCATGCACCACATTCT
CTTCCACCATACAGACCGCTCAGTGCGCCGTTTTGCTTTGCCATTGGAGT
GTGCGTCTTTTTTACGGCAGTTTCTTGACTGTGCTTCTTCCCAGTGGCTG
GGACACCCCGCAGAGGCAAGGCTACGCTACAGCCCAGCCCGGGCCACAGG
CCGCAACACCAGCAGCAAGCACCGGCGCAAGGAGCTCACCACCCACATCA
TCTTCGGGGAGCTGCATAAAAGCAGGCCGGAAAAAGTACCTCTATAGCCA
CCCAAGCAGCGTTACCACAGCATGGACTTGATCAATAAATTAGTGGGTGG
GCAAGGCTGCACGGCGGATGGCGCCGCTGCCGCTCGCAACCCCTTGGCCC
GCTTGGTGGATAGCGTCCTGGATACAGCACCGATGCCTGACGGCGCCATC
CGTGATGCGGGGGCGCATAGCGGTCCCATGGCGGCCGGTCTACAAGCCGG
ACTGTATGAAGGGGGGGAGGCCATGCTCCACCACTACCATCCTCACCACC
ACCACCACCCGCCTCACGGCCCCCCACCGCCGCCCCCTCTTATGGTGATA
GGGAGGGGAAGGGGGAGAGGAAGTGAAAGCAGGGGAGGCGATCCGTGGGC
GCAGGAGTTCATGCAAATGCCACCGGATGCCAGAGCCATGCATCACCAGC
AGCAGCAGCAGCGAGAGATGGAGGAGGCTTTCCTGGAAGCGGAGCGGATG
CGGAAGTACAGCACCGGCCCAACTAGGCTGCATCATCAAAGCCCCGCTTT
CCATCACCAACACCAACGCCCCTTGCCGCAGCAGCAAGGTCATCACGAGT
GGAGCGCGGAGTTCGAACAGTCTCTTCCTCCCCAACTTTGCCCCTCTCCC
CCTCCTCCGCAGCACCAGCACCAACAGCATCCACACGCAGCATCCTTGGA
GGCAGTGTGGGAGGAAGCAGAGGTCCATGCCCAGCAATTGCAGCGCCAGT
GTCAGCAGCAGGAGCAGCGCCATCAACAACAAGGAGGGGAGCCGTGGGCT
CAGGAGCTTGAACTGGGGGAAGCATGGTCGCACGCCGGCCAAGCCTTTCC
CGCCCTCGAAGAGAGTCGTGTCGAGGCAGGCTCCTCCTCACTCCCTCCCT
CCCTTGAGGCCTCCCTCCCTCCCTCCCTCCATGAAGACGACGCTCAGGCC
ACCCGTGCCGCCTCGGGGGCGGTCCTGGAGGCCTTGCGGGAGGGAGGGAG
GGAGGGGGGGGTGGGAGCCAAAATGGCGCGGTCGGAGTTCGTGGGGTTTA
TCTCCCAGTTGAACAAAGGCGAGCTGGCATTCGAGGGCAACACGGTGGTG
CCCAGAGCGGGAGATTTTGAAGGCGCCTGGGCAGAGACAGCGGAGGAACG
GCGGCACCAAGTAGCGCAAGGACTAGGTCTGGAGGGGGAGTGGGAGGCCG
CCGAACGGGCAGCAGTAGAGGGACCGGATATAGGGGCTGCGGCGGGCTTG
GAGGGGGCCTGGGCAGAAGCTCATCGAGTGAGAGGCGGGCAGGGTGCCGA
TTTGTCAGGCAGCGTCAAGGCGGGACTGGACGAGGCCTGGGCACAGGCCG
AGGTCGAGGCGAAGAATGCGGACCTCGAGAGCCTGTGGAAGGAGGGGGCG
GAGGGGAAGGACCTGGATATGGACGCGTTTTGGGACCACGTGCAGTCCGT
GGCAGGGGAATACGACAACGCCATGGCCAAGGACGCCGTCCCCGGCATAA
GCAAGGCAGACGCCGTCGAGCTAGAGGCGTCATGGCAGCAGCAAGCTCGC
GACCTGGAGGAGTGGGCAGCGAGGGGGGCGGCTGAAGGAGGACTGGAGGG
AGGGCAGGCGGCGTACGGTTTCGCAGACGACAACGAATTCATGGACCACG
CGGATGCATTTGCTGAGGGCATGGCCCTCTTCGAAGCCGGGGAGCTGCGT
CAGGCCGTGCTGGCTTTCGAAGCGGAGGTGCAACGAGCTCCACACAATGC
CGAGGCCTGGCGCATGCTCGGCATGACCCACGCCGAGAATGACGAGGACA
AGCGGGCAATCGCCTGTCTGGAGCGCGCCGTCGACCACGACCCCCACTCG
CTCCCCACCCTTCTCGCCCTCGGCGTCAGCTACGTCAACGAGCTGGACTC
GGTACGAGCTCTGCAGAACCTCAAGGCCTGGATCGAGCACAACCCCAAGT
ACCAGGGCCTGGAAATCCGCGTAGACGAGTACAGCGACGGCTCTCTCATG
GACGAAGTGATGCAGCTTATGCTGCAGGCCCATGACTGGGACCAGGCCAC
TAGCGGACCGGGCGGCCAGGGTAGCGACGCGGACGTGCAGATCGTCCTCG
GCGTGCTCTACAATGTCTCGCACGACTTTGACTCGGCAACGGCAGCTTTC
AGGCAGGCTTTGCTCTCGAGGCCCAGCGATTACTCCCTGTGGAACAAGCT
GGGTGCCACGCTCGCCAACAGCCAGCGGTCTCAAGAAGCACTTCCTGCTT
ACCACCGTGCCCTTGACATCAAACCCAAATATGCACGAGGCTGGTTGAAC
CTGGGAATCTCGCATGCTAATCTCTCCAGCTTCGATGAGGCCGCCAAGTG
CTACCTCCAAGCTTTGCGGCTGAACCCTGAGGCAATGCACATCTGGGGCT
ACCTGCGGGTGACATTCACGTCCATGGAGCGTTTTGACCTCGTCCAGTTG
GCGGGTCAGCAAGATCCAAGCGTGTTTGATGCGGAATTCGGTCGGTAGAA
GAAAAGAGGGAGGCAACCAAGTAGGAGTTAAAATTTTAATTGTTGGGAAC
GATCCAATTTTATATACAGGACGGGAAGGATAGGGAAAGTCAGCATACGC
AGCTGCAGGTTTGTGATTAGAAGAAAAAGCTTAAAAGGAAATTCAACAAT
ACAGACATACAGCTGCACCC

protein sequence of NO27G01200.1

>NO27G01200.1-protein ID=NO27G01200.1-protein|Name=NO27G01200.1|organism=Nannochloropsis oceanica|type=polypeptide|length=809bp
MDLINKLVGGQGCTADGAAAARNPLARLVDSVLDTAPMPDGAIRDAGAHS
GPMAAGLQAGLYEGGEAMLHHYHPHHHHHPPHGPPPPPPLMVIGRGRGRG
SESRGGDPWAQEFMQMPPDARAMHHQQQQQREMEEAFLEAERMRKYSTGP
TRLHHQSPAFHHQHQRPLPQQQGHHEWSAEFEQSLPPQLCPSPPPPQHQH
QQHPHAASLEAVWEEAEVHAQQLQRQCQQQEQRHQQQGGEPWAQELELGE
AWSHAGQAFPALEESRVEAGSSSLPPSLEASLPPSLHEDDAQATRAASGA
VLEALREGGREGGVGAKMARSEFVGFISQLNKGELAFEGNTVVPRAGDFE
GAWAETAEERRHQVAQGLGLEGEWEAAERAAVEGPDIGAAAGLEGAWAEA
HRVRGGQGADLSGSVKAGLDEAWAQAEVEAKNADLESLWKEGAEGKDLDM
DAFWDHVQSVAGEYDNAMAKDAVPGISKADAVELEASWQQQARDLEEWAA
RGAAEGGLEGGQAAYGFADDNEFMDHADAFAEGMALFEAGELRQAVLAFE
AEVQRAPHNAEAWRMLGMTHAENDEDKRAIACLERAVDHDPHSLPTLLAL
GVSYVNELDSVRALQNLKAWIEHNPKYQGLEIRVDEYSDGSLMDEVMQLM
LQAHDWDQATSGPGGQGSDADVQIVLGVLYNVSHDFDSATAAFRQALLSR
PSDYSLWNKLGATLANSQRSQEALPAYHRALDIKPKYARGWLNLGISHAN
LSSFDEAAKCYLQALRLNPEAMHIWGYLRVTFTSMERFDLVQLAGQQDPS
VFDAEFGR*

mRNA from alignment at chr27:379381..384938-

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>NO27G01200.1 ID=NO27G01200.1|Name=NO27G01200.1|organism=Nannochloropsis oceanica|type=mRNA|length=5558bp|location=Sequence derived from alignment at chr27:379381..384938- (Nannochloropsis oceanica)
GCGACAACATCAGTTTTGTTGTCATGCATTCAGCTCCGCTTCGCGGCCGA
GCGTCGCCGAACGCCTGTTCGACCCCCGCCCGAGTCACACCGCCATGTCA
CCAGCCCACTGGTCACCTTCTCCTACCCCCAGCCCCACCTTCGGGATAAA
AAGGCGAAATACCACACTAGAAGGTTGCCTCGCACACCGCATCAAACAAA
AAACTTGACACGAAACACGAAAAAAACGTTAGGCTGTTCTTGGAATAATA
CAAACTAAGAAGCAACTTGCTTGATCCCTAATGGTAGATCTATCCTTCTA
AGCCCCCAAGAGCTCCACAAAACACTGTCTCAAGTCATGCACCACATTCT
CTTCCACCATACAGACCGCTCAGTGCGCCGTTTTGCTTTGCCATTGGAGT
GTGCGTCTTTTTTACGGCAGTTTCTTGACTGTGCTTCTTCCCAGTGGCTG
GGACACCCCGCAGAGGCAAGGCTACGCTACAGCCCAGCCCGGGCCACAGG
CCGCAACACCAGCAGCAAGCACCGGCGCAAGGAGCTCACCACCCACATCA
TCTTCGGGGAGCTGCATAAAAGCAGGCCGGAAAAAGTACCTCTATAGCCA
CCCAAGCAGCGTTACCACAGCATGGACTTGATCAATAAATTAGTGGGTGG
GCAAGGCTGCACGGCGGATGGCGCCGCTGCCGCTCGCAACCCCTTGGCCC
GCTTGGTGGATAGCGTCCTGGATACAGCACCGGTGTGTAGAGGCTGTCTC
AATCATCCCCGCGTCGTATTTTTTCATCCAATCACCTCTCCCTACCCTTT
CCTCCCCCGTCCCATCCCATTTGTCTCGCCCCCTTTCTTACTGACTCCCC
ACATTCATTTGACGCACCCCTACCCCCCCCCCCCCCCTCTCCTTTGTTCC
TGCCATTACACCACCAATACAGATGCCTGACGGCGCCATCCGTGATGCGG
GGGCGCATAGCGGTCCCATGGCGGCCGGTCTACAAGCCGGACTGTATGAA
GGGGGGGAGGCCATGCTCCACCACTACCATCCTCACCACCACCACCACCC
GCCTCACGGCCCCCCACCGCCGCCCCCTCTTATGGTGATAGGGAGGGGAA
GGGGGAGAGGAAGTGAAAGCAGGGGAGGCGATCCGTGGGCGCAGGAGTTC
ATGCAAATGCCACCGGATGCCAGGTAGGAGGGGGGGAGGGATGGAGGGGA
TCAGGGGAGCGAAGGAGAGATGGAGGAAGGCACAGTCAGAGAATTTATAG
ATGAAGTATGGTAGATCTGAAGACAGTGAATTTTGTACTTTTCCTGAAGC
TATTTGCATAATCTAATCTGACACACAAATGTGCCCACACTTACATGCTG
GTGACGACAACAGAGCCATGCATCACCAGCAGCAGCAGCAGCGAGAGATG
GAGGAGGCTTTCCTGGAAGCGGAGCGGATGCGGAAGTACAGCACCGGCCC
AACTAGGGTGCGTTGTCCCTAGCAAGTAGTCATCCTCAGTTTCCAGTTAT
TTTCCTCGCTCGTACTGTCTCTTTCTCTACTCCAGTTATTTTCCTCGCTC
GTTCTGTCTCTTTCTCTACCACTTATCCCCTCGTTTTCCCCCATCTTTCC
TCCCTCCTTCCCGGCAGCTGCATCATCAAAGCCCCGCTTTCCATCACCAA
CACCAACGCCCCTTGCCGCAGCAGCAAGGTCATCACGAGTGGAGCGCGGA
GTTCGAACAGTCTCTTCCTCCCCAACTTTGCCCCTCTCCCCCTCCTCCGC
AGCACCAGCACCAACAGCATCCACACGCAGCATCCTTGGAGGCAGTGTGG
GAGGAAGCAGAGGTCCATGCCCAGCAATTGCAGCGCCAGTGTCAGCAGCA
GGAGCAGCGCCATCAACAACAAGGAGGGGAGCCGTGGGCTCAGGAGGTAG
GCGGGGGAAGGGAGGAGGGAGGGAGGGAGGGAGGGCACACATTCATAGAT
CTTCATTTTTTGTTCCTTGGCACCGAGCGAGCTACTGCACGCCCATCCAT
ATCCACCGGGACCCGCCTCTTAATCGGCCCTTTCACCCAATATTGTTCCC
TTCCTCCCTTCCTCCCTTCCTCCCTTCCTCCCTTCCTCCCTTCCTCTCTT
CCTCCCTCCCTCCCTCTTACTCTCTGCCCAAGCTTGAACTGGGGGAAGCA
TGGTCGCACGCCGGCCAAGCCTTTCCCGCCCTCGAAGAGAGTCGTGTCGA
GGCAGGCTCCTCCTCACTCCCTCCCTCCCTTGAGGCCTCCCTCCCTCCCT
CCCTCCATGAAGACGACGCTCAGGCCACCCGTGCCGCCTCGGGGGCGGTC
CTGGAGGCCTTGCGGGAGGGAGGGAGGGAGGGGGGGGTGGGAGCCAAAAT
GGCGCGGTCGGAGTTCGTGGGGTTTATCTCCCAGTTGAACAAAGGCGAGC
TGGCATTCGAGGGCAACACGGTAATATGCACATTGTGGCGGAACCCGGCC
ATCCCACTCGCCTCTCATTCCCTTCTCCCCTCTCTCTCCTTTTCCTCACA
CCAGTAGCCGCGCGCGAAATGAATGCTAGATACCGCACGGAGGGCACCAA
GCGCATCTTTCTCACCCCTCCCCCCGCTCCTCCCTTTTTCTTCCCTCCCT
CAGGTGGTGCCCAGAGCGGGAGATTTTGAAGGCGCCTGGGCAGAGACAGC
GGAGGAACGGCGGCACCAAGTAGCGCAAGGACTAGGTCTGGAGGGGGAGT
GGGAGGCCGCCGAACGGGCAGCAGTAGAGGTGAGAGACAAGAGGGAGTCA
GGATTGAGAGAGGAAATGTGCTTGAGGGAGGGAGGGAGGGTGGGTGGGAA
GGAAGAAACAGCAGTGCCCACTCACCGGTCATTCCCGTCGGGTACTCACT
CACGTGGATTTGTCTTTTCCATCACCAGGGACCGGATATAGGGGCTGCGG
CGGGCTTGGAGGGGGCCTGGGCAGAAGCTCATCGAGTGAGAGGCGGGCAG
GGGTACGTAGTGGAGTAGAAGGAAAGGGAATGACGGAGGGAGAGAGAGGG
GGAAGGGGACGCGAGGCCAATCTCAATGACGAATTTGATAACAACCAATT
TTAGCTCTGATTGCCTGTGATGGCTTTTTAACTGCAATCTGACTGGGACG
TTGCCTCCCTGCCTTCATTTCTTCATTGTCTGCCACCTTCTCTCAGGAGT
TGCCCCACCTTTAACCCTCCCTCCCTCCCTTCCTCCCTCCCTCCCTGTTT
AGTGCCGATTTGTCAGGCAGCGTCAAGGCGGGACTGGACGAGGCCTGGGC
ACAGGCCGAGGTCGAGGCGAAGGTAGATAGAGGGGGTTGGAGCCGGGGGG
AAGGGAAAGTGAAATAGTAGCAAGAAGAGGGAAACGGATGACGTACTTAA
ATAAGGTATGGATACTATGAAGCAGATTGAAAATTCTCTTCCCACATTTC
CCATTGCCCTCCCTCCCTTCTTCTCCAAGAATGCGGACCTCGAGAGCCTG
TGGAAGGAGGGGGCGGAGGGGAAGGACCTGGATATGGACGCGTTTTGGGA
CCACGTGCAGTCCGTGGCAGGGGAATACGACAACGCCATGGCCAAGGGTG
AGGAGGCGGGACGAGGTTGGAGGGGGTGGGAGAGAAATCTAGTCGGTGGA
CCAGGAAGGGAAGCCGCCTGTCGTCATGATGTCGTGTGTATTTGTCCTAT
AGCCGAGATTTTCACTGTAGCCGCCGTTTCCTCTTTCTCCGCTTCTATTC
TCTTATCCCTGCCTCCTCAGACGCCGTCCCCGGCATAAGCAAGGCAGACG
CCGTCGAGCTAGAGGCGTCATGGCAGCAGCAAGCTCGCGACCTGGAGGAG
TGGGCAGCGAGGGGGGCGGCTGAAGGAGGACTGGAGGGAGGGCAGGCGGC
GTACGGTTTCGCAGACGACAACGAATTCATGGACCACGCGGATGCATTTG
CTGAGGGGTAAGGAGAGAGGGGGGAAAGGAAAGCAGAAAGGGGAGGAGGA
GGAAGGATCATCACCAGGAAAGATGCGCGTATTCTCACACTCCTCCTCAC
CTTCTTGTCTTTTATAGCATGGCCCTCTTCGAAGCCGGGGAGCTGCGTCA
GGCCGTGCTGGCTTTCGAAGCGGAGGTGCAACGAGCTCCACACAATGCCG
AGGCCTGGCGCATGCTCGGTACGTCTCATGTCATCAACACTTCACGTGGA
CATCAGCTTCTTACCTTCGTCTTCACCACTTTCCTGTCTTCATTGAGTTT
TCTTTCTCCCTTCTCGCCCATTTAACATCCACTTCCTCCTTTTCCCCTTC
TACGCCCAGGCATGACCCACGCCGAGAATGACGAGGACAAGCGGGCAATC
GCCTGTCTGGAGCGCGCCGTCGACCACGACCCCCACTCGCTCCCCACCCT
TCTCGCCCTCGGCGTCAGCTACGTCAACGAGCTGGACTCGGTACGAGCTC
TGCAGAACCTCAAGGCCTGGATCGAGCACAACCCCAAGTACCAGGTACGT
CCCTTCCTACACCCACACTCTCTCCATCTGATCGCTCTGCTTCCTTCGAG
CTTATTTCGCACGACATGCAGTCGATGGTGCATTGATGTACGACTTCCTG
GGGCTTTCTTTCCTCTCTTGCTTTCGTAGGGCCTGGAAATCCGCGTAGAC
GAGTACAGCGACGGCTCTCTCATGGACGAAGTGATGCAGCTTATGCTGCA
GGCCCATGACTGGGACCAGGCCACTAGCGGACCGGGCGGCCAGGGTAGCG
ACGCGGACGTGCAGATCGTCCTCGGCGTGCTCTACAATGTCTCGCACGAC
TTTGACTCGGCAACGGCAGCTTTCAGGCAGGCTTTGCTCTCGAGGCCCAG
GTAGGGAAGGAGGAAGAAGCTGATGAAGGGAAAAAGGTCGGCGTGAAAGT
GTGTAGGAATGATTATTATTTTCTCATTTGTTCGCGATCTCTCCCTCGCT
ACCTTGCTCTCTCCGTCTCGCAGCGATTACTCCCTGTGGAACAAGCTGGG
TGCCACGCTCGCCAACAGCCAGCGGTCTCAAGAAGCACTTCCTGCTTACC
ACCGTGCCCTTGACATCAAACCCAAATATGCACGAGGCTGGTTGAACCTG
GGAATCTCGCATGCTAATCTCTCCAGGTGAGTAGAGTGTCTTTCTCCTCT
ACCTTATTTGACGGAGCCACCCTCAAATTGGGACCATGGCATATCTGTCT
TCTCCACACCTTCCTCACCCATCCCACTTGTCCTTTCCGCCCTTCCTCTC
ATGGGCATGCCCAACAGCTTCGATGAGGCCGCCAAGTGCTACCTCCAAGC
TTTGCGGCTGAACCCTGAGGCAATGCACATCTGGGGCTACCTGCGGGTGA
CATTCACGTCCATGGAGCGTTTTGACCTCGTCCAGTTGGCGGGTCAGCAA
GATCCAAGCGTGTTTGATGCGGAATTCGGTCGGTAGAAGAAAAGAGGGAG
GCAACCAAGTAGGAGTTAAAATTTTAATTGTTGGGAACGATCCAATTTTA
TATACAGGACGGGAAGGATAGGGAAAGTCAGCATACGCAGCTGCAGGTTT
GTGATTAGAAGAAAAAGCTTAAAAGGAAATTCAACAATACAGACATACAG
CTGCACCC

Coding sequence (CDS) from alignment at chr27:379381..384938-

>NO27G01200.1 ID=NO27G01200.1|Name=NO27G01200.1|organism=Nannochloropsis oceanica|type=CDS|length=2427bp|location=Sequence derived from alignment at chr27:379381..384938- (Nannochloropsis oceanica)
ATGGACTTGATCAATAAATTAGTGGGTGGGCAAGGCTGCACGGCGGATGG
CGCCGCTGCCGCTCGCAACCCCTTGGCCCGCTTGGTGGATAGCGTCCTGG
ATACAGCACCGATGCCTGACGGCGCCATCCGTGATGCGGGGGCGCATAGC
GGTCCCATGGCGGCCGGTCTACAAGCCGGACTGTATGAAGGGGGGGAGGC
CATGCTCCACCACTACCATCCTCACCACCACCACCACCCGCCTCACGGCC
CCCCACCGCCGCCCCCTCTTATGGTGATAGGGAGGGGAAGGGGGAGAGGA
AGTGAAAGCAGGGGAGGCGATCCGTGGGCGCAGGAGTTCATGCAAATGCC
ACCGGATGCCAGAGCCATGCATCACCAGCAGCAGCAGCAGCGAGAGATGG
AGGAGGCTTTCCTGGAAGCGGAGCGGATGCGGAAGTACAGCACCGGCCCA
ACTAGGCTGCATCATCAAAGCCCCGCTTTCCATCACCAACACCAACGCCC
CTTGCCGCAGCAGCAAGGTCATCACGAGTGGAGCGCGGAGTTCGAACAGT
CTCTTCCTCCCCAACTTTGCCCCTCTCCCCCTCCTCCGCAGCACCAGCAC
CAACAGCATCCACACGCAGCATCCTTGGAGGCAGTGTGGGAGGAAGCAGA
GGTCCATGCCCAGCAATTGCAGCGCCAGTGTCAGCAGCAGGAGCAGCGCC
ATCAACAACAAGGAGGGGAGCCGTGGGCTCAGGAGCTTGAACTGGGGGAA
GCATGGTCGCACGCCGGCCAAGCCTTTCCCGCCCTCGAAGAGAGTCGTGT
CGAGGCAGGCTCCTCCTCACTCCCTCCCTCCCTTGAGGCCTCCCTCCCTC
CCTCCCTCCATGAAGACGACGCTCAGGCCACCCGTGCCGCCTCGGGGGCG
GTCCTGGAGGCCTTGCGGGAGGGAGGGAGGGAGGGGGGGGTGGGAGCCAA
AATGGCGCGGTCGGAGTTCGTGGGGTTTATCTCCCAGTTGAACAAAGGCG
AGCTGGCATTCGAGGGCAACACGGTGGTGCCCAGAGCGGGAGATTTTGAA
GGCGCCTGGGCAGAGACAGCGGAGGAACGGCGGCACCAAGTAGCGCAAGG
ACTAGGTCTGGAGGGGGAGTGGGAGGCCGCCGAACGGGCAGCAGTAGAGG
GACCGGATATAGGGGCTGCGGCGGGCTTGGAGGGGGCCTGGGCAGAAGCT
CATCGAGTGAGAGGCGGGCAGGGTGCCGATTTGTCAGGCAGCGTCAAGGC
GGGACTGGACGAGGCCTGGGCACAGGCCGAGGTCGAGGCGAAGAATGCGG
ACCTCGAGAGCCTGTGGAAGGAGGGGGCGGAGGGGAAGGACCTGGATATG
GACGCGTTTTGGGACCACGTGCAGTCCGTGGCAGGGGAATACGACAACGC
CATGGCCAAGGACGCCGTCCCCGGCATAAGCAAGGCAGACGCCGTCGAGC
TAGAGGCGTCATGGCAGCAGCAAGCTCGCGACCTGGAGGAGTGGGCAGCG
AGGGGGGCGGCTGAAGGAGGACTGGAGGGAGGGCAGGCGGCGTACGGTTT
CGCAGACGACAACGAATTCATGGACCACGCGGATGCATTTGCTGAGGGCA
TGGCCCTCTTCGAAGCCGGGGAGCTGCGTCAGGCCGTGCTGGCTTTCGAA
GCGGAGGTGCAACGAGCTCCACACAATGCCGAGGCCTGGCGCATGCTCGG
CATGACCCACGCCGAGAATGACGAGGACAAGCGGGCAATCGCCTGTCTGG
AGCGCGCCGTCGACCACGACCCCCACTCGCTCCCCACCCTTCTCGCCCTC
GGCGTCAGCTACGTCAACGAGCTGGACTCGGTACGAGCTCTGCAGAACCT
CAAGGCCTGGATCGAGCACAACCCCAAGTACCAGGGCCTGGAAATCCGCG
TAGACGAGTACAGCGACGGCTCTCTCATGGACGAAGTGATGCAGCTTATG
CTGCAGGCCCATGACTGGGACCAGGCCACTAGCGGACCGGGCGGCCAGGG
TAGCGACGCGGACGTGCAGATCGTCCTCGGCGTGCTCTACAATGTCTCGC
ACGACTTTGACTCGGCAACGGCAGCTTTCAGGCAGGCTTTGCTCTCGAGG
CCCAGCGATTACTCCCTGTGGAACAAGCTGGGTGCCACGCTCGCCAACAG
CCAGCGGTCTCAAGAAGCACTTCCTGCTTACCACCGTGCCCTTGACATCA
AACCCAAATATGCACGAGGCTGGTTGAACCTGGGAATCTCGCATGCTAAT
CTCTCCAGCTTCGATGAGGCCGCCAAGTGCTACCTCCAAGCTTTGCGGCT
GAACCCTGAGGCAATGCACATCTGGGGCTACCTGCGGGTGACATTCACGT
CCATGGAGCGTTTTGACCTCGTCCAGTTGGCGGGTCAGCAAGATCCAAGC
GTGTTTGATGCGGAATTCGGTCGGTAG

Synonyms

Publications