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Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
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| chr26 | genome | chr26:244831..248649 + |
Analyses
This mRNA is derived from or has results from the following analyses
Homology
BLAST of NO26G00710.1 vs.
Match: AET85053.1 (nitrite reductase [Nannochloropsis sp. W2J3B]) HSP 1 Score: 869.4 bits (2245), Expect = 7.100e-249 Identity = 445/484 (91.94%), Postives = 445/484 (91.94%), Query Frame = 0
Query: 188 MRIPNGLLTSKQLFFISEAMAKYGDDYEAVVDITTRQNLQLRGLKLEDTSDLITGLVELGLGSYSSGLDNVRNVVGSPLAGIDSLEDFDTRQI---------------CKEINDMVTGNNKGNPEWANLPRKFNIAVSGSRDDYAHTHINDIGLQAVRHEKTGEAGFNVVLGGYFSTKRAAGSVDLNLWVPPGQVLNLCYSILRIFRDHGHRKDRQKARLLWLIEEWGLETFRNAVLEEMQTNAKYGVGEENSLPVDGEQRHAEPSFERRDYLGVHRQKQTGYSWVGLHVPVGRFRAFEIHELGRLAEKYSGGEMRLTVEQNVIFPNVRDEEVASLLADPFIAGGRFKINPGPIARGLVACTGAQFCGVGLVETKTRAIELAEKLEAAYDIPQTVRMHFSGCPNSCGQSQVADIGLMGAPAKKDGKAVEGVDVFLGGAVGE-----EAALGEKFLKNVAMGEEDSDVLSALGELLVERFGAVKK 652
MRIPNGLLTSKQLFFISEAMAKYGDDYEAVVDITTRQNLQLRGLKLEDTSDLITGLVELGLGSYSSGLDNVRNVVGSPLAGIDSLEDFDTRQI KEINDMVTGNNKGNPEWANLPRKFNIAVSGSRDDYAHTHINDIGLQAVRHEKTGEAGFNVVLGGYFSTKRAAGSVDLNLWVPPGQVLNLCYSILRIFRDHGHRKDRQKARLLWLIEEWGLETFRNAVLEEMQTNAKYGVGEENSLPVDGEQRHA GYSWVGLHVPVGRFRAFEIHELGRLAEKYSGGEMRLTVEQNVIFPNVRDEEVASLLADPFIAGGRFKINPGPIARGLVACTGAQFCGVGLVETKTRAIELAEKLEAAYDIPQTVRMHFSGCPNSCGQSQVADIGLMGAPAKKDGKAVEGVDVFLGGAVGE EAALGEKFLKNVAMGEEDSDVLSALGELLVERFGAVKK
Sbjct: 1 MRIPNGLLTSKQLFFISEAMAKYGDDYEAVVDITTRQNLQLRGLKLEDTSDLITGLVELGLGSYSSGLDNVRNVVGSPLAGIDSLEDFDTRQIWTNHTFKYQHTQPSPSKEINDMVTGNNKGNPEWANLPRKFNIAVSGSRDDYAHTHINDIGLQAVRHEKTGEAGFNVVLGGYFSTKRAAGSVDLNLWVPPGQVLNLCYSILRIFRDHGHRKDRQKARLLWLIEEWGLETFRNAVLEEMQTNAKYGVGEENSLPVDGEQRHA------------------GYSWVGLHVPVGRFRAFEIHELGRLAEKYSGGEMRLTVEQNVIFPNVRDEEVASLLADPFIAGGRFKINPGPIARGLVACTGAQFCGVGLVETKTRAIELAEKLEAAYDIPQTVRMHFSGCPNSCGQSQVADIGLMGAPAKKDGKAVEGVDVFLGGAVGEGGWVLEAALGEKFLKNVAMGEEDSDVLSALGELLVERFGAVKK 466
The following BLAST results are available for this feature:
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >NO26G00710.1 ID=NO26G00710.1|Name=NO26G00710.1|organism=Nannochloropsis oceanica|type=mRNA|length=1956bp
ATGGCCCACCCTCGCCTCGCCCTATTGGCAACTGCCGCCCTCCTGCTATC
TGGCGCCGTCACATCCAGCGCCCGTCGGCAGCAAGCCTTCGTCGCCCTCA
GAGCTGGTCTCCACACGCGCGGCATTTGCCGAAGCTACAATGATGCAAGC
CCCCGCTCTGTGACCCCGCCGACCCACGCGCCCTCCTCTACCCTCGACGC
CCCTGGCGTAGCAGAAAAAACAACCGAGCGTGAAATTATCAACTTCCGCC
CCAAGGTGGAGCTTCCCCCTAAGGTTCAGGAATTGTTCGGAACGCCGCCT
GCCATGACAGGCACAGATTACCTGCCGGCCGAGACGCTGGCCCGCGCCCA
GAAGGGTAGCTTCCTCGAGAAGATAAAGCTTAAGAAGGACGGCTCGGTAG
CGTGGCGCGAGGTACACGAGCTCGCTGCCCTCCTCCGCTCGGGACAATAC
ACCTGGGAAGAGCTGGACTTGGCAACGGACACCGATGACATGGACCAGCG
GCTTAAGTACGCCGGTATTTTCCACAGGCGCAAGCGCACCCCTGGGCGCT
TCATGATGCGAATGCGCATTCCTAACGGGCTACTCACATCCAAGCAGCTC
TTCTTCATCTCGGAGGCCATGGCCAAGTACGGGGACGATTATGAGGCGGT
AGTTGACATCACAACACGGCAAAACCTTCAGCTTCGGGGGCTCAAGCTGG
AGGACACAAGCGACCTGATCACAGGCCTGGTAGAGCTCGGCTTGGGTTCC
TACAGCAGTGGCCTCGACAACGTGCGCAACGTTGTGGGTAGCCCCCTGGC
CGGTATTGACTCGCTGGAGGACTTTGACACGCGCCAGATATGTAAGGAGA
TTAACGATATGGTCACCGGTAACAACAAGGGAAACCCGGAATGGGCCAAC
TTACCCCGTAAATTTAACATTGCCGTGTCGGGCTCCCGTGATGACTATGC
ACACACGCACATCAACGATATTGGGCTACAGGCGGTGCGTCACGAGAAGA
CAGGCGAGGCTGGCTTCAACGTTGTCCTCGGCGGCTATTTCTCGACAAAA
CGTGCTGCCGGGAGCGTGGATCTAAACCTCTGGGTACCTCCTGGCCAGGT
GCTCAATCTGTGCTATTCCATCCTTCGGATCTTCCGCGACCATGGCCATC
GCAAAGACCGTCAAAAAGCACGCCTGCTTTGGCTCATCGAAGAGTGGGGG
TTGGAGACCTTCCGCAACGCTGTGCTTGAAGAAATGCAGACCAATGCCAA
ATACGGCGTGGGAGAGGAAAATTCACTGCCGGTCGACGGGGAACAACGCC
ATGCTGAACCATCTTTCGAACGCCGGGATTACTTGGGTGTACACCGCCAA
AAACAAACAGGCTACTCTTGGGTTGGGCTCCATGTCCCCGTCGGTCGTTT
CCGCGCCTTCGAAATTCACGAGCTGGGCAGATTAGCGGAGAAATACAGCG
GGGGGGAGATGCGATTAACGGTGGAACAGAATGTGATCTTTCCCAATGTG
CGCGACGAGGAGGTGGCGTCTTTACTGGCGGATCCCTTTATTGCTGGGGG
GCGATTTAAGATTAATCCAGGACCGATCGCCCGCGGGCTGGTGGCCTGCA
CCGGTGCGCAATTCTGCGGTGTCGGGCTTGTGGAGACGAAGACCCGAGCC
ATTGAGCTAGCCGAGAAGCTGGAGGCCGCATATGACATTCCTCAGACAGT
GCGCATGCACTTCTCCGGGTGCCCTAACAGCTGCGGACAGAGTCAGGTGG
CGGACATTGGCTTGATGGGCGCGCCGGCCAAAAAGGATGGAAAGGCCGTA
GAAGGCGTGGATGTCTTCCTGGGCGGTGCTGTAGGAGAAGAGGCGGCGCT
GGGCGAGAAATTCCTAAAAAACGTCGCCATGGGGGAGGAAGACTCTGACG
TTCTTAGCGCGTTGGGCGAGCTCTTGGTTGAGCGCTTCGGGGCGGTGAAG
AAGTAG back to topprotein sequence of NO26G00710.1 >NO26G00710.1-protein ID=NO26G00710.1-protein|Name=NO26G00710.1|organism=Nannochloropsis oceanica|type=polypeptide|length=652bp
MAHPRLALLATAALLLSGAVTSSARRQQAFVALRAGLHTRGICRSYNDAS
PRSVTPPTHAPSSTLDAPGVAEKTTEREIINFRPKVELPPKVQELFGTPP
AMTGTDYLPAETLARAQKGSFLEKIKLKKDGSVAWREVHELAALLRSGQY
TWEELDLATDTDDMDQRLKYAGIFHRRKRTPGRFMMRMRIPNGLLTSKQL
FFISEAMAKYGDDYEAVVDITTRQNLQLRGLKLEDTSDLITGLVELGLGS
YSSGLDNVRNVVGSPLAGIDSLEDFDTRQICKEINDMVTGNNKGNPEWAN
LPRKFNIAVSGSRDDYAHTHINDIGLQAVRHEKTGEAGFNVVLGGYFSTK
RAAGSVDLNLWVPPGQVLNLCYSILRIFRDHGHRKDRQKARLLWLIEEWG
LETFRNAVLEEMQTNAKYGVGEENSLPVDGEQRHAEPSFERRDYLGVHRQ
KQTGYSWVGLHVPVGRFRAFEIHELGRLAEKYSGGEMRLTVEQNVIFPNV
RDEEVASLLADPFIAGGRFKINPGPIARGLVACTGAQFCGVGLVETKTRA
IELAEKLEAAYDIPQTVRMHFSGCPNSCGQSQVADIGLMGAPAKKDGKAV
EGVDVFLGGAVGEEAALGEKFLKNVAMGEEDSDVLSALGELLVERFGAVK
K* back to topmRNA from alignment at chr26:244831..248649+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >NO26G00710.1 ID=NO26G00710.1|Name=NO26G00710.1|organism=Nannochloropsis oceanica|type=mRNA|length=3819bp|location=Sequence derived from alignment at chr26:244831..248649+ (Nannochloropsis oceanica)
ATGGCCCACCCTCGCCTCGCCCTATTGGCAACTGCCGCCCTCCTGCTATC
TGGCGCCGTCACATCCAGGTAAGTTCAGGAGAAGTGGTTATTGTACAGAC
GATCTTACTTGGAGCTTACCCAGGAAAAAAATAATTGTCGACCTTCAAAA
CAGCGCCCGTCGGCAGCAAGCCTTCGTCGCCCTCAGAGCTGGTCTCCACA
CGCGCGGCATTTGCCGAAGCTACAATGATGCAAGGTACGATAAACCAGAT
GACAAAAGTGGAGCCTAGACAGGTAAACTTACAAGAAATTCTGCCTCTAT
CCATCCCCTTCCCCCAGCCCCCGCTCTGTGACCCCGCCGACCCACGCGCC
CTCCTCTACCCTCGACGCCCCTGGCGTAGCAGAAAAAACAACCGAGCGTG
AAATTATCAACTTCCGCCCCAAGGTGGAGCTTCCCCCTAAGGTTCAGGAA
TTGTTCGGAACGCCGCCTGCCATGACAGGCACAGATTACCTGCCGGCCGA
GACGCTGGCCCGCGCCCAGAAGGGTAGCTTCCTCGAGAAGGCAGGTCAAT
GAATGAAATAGCGAGAAAACTATGACTCAAGGAGCACCAAAACATCGAAT
AAATTGAAATTCATACATGGGATATCATGCAATTACAGATAAAGCTTAAG
AAGGACGGCTCGGTAGCGTGGCGCGAGGTACACGAGCTCGCTGCCCTCCT
CCGCTCGGGACAATACACCTGGTACGCACATACACTTTCTCGTGTCTCGA
ACCGCAGATCCCCCACTCGCTGTAACAACCTCTCACTCTCGTTTCATCAC
TCATATACGCAGGGAAGAGCTGGACTTGGCAACGGACACCGATGACATGG
ACCAGCGGCTTAAGTACGCCGGTATTTTCCACAGGCGCAAGCGCACCCCT
GGGCGCTTCATGATGCGGTATGTGTTCCCTCTATGCACAGCTGAGTGAAA
GAAAGAAGGATGAAAGGAGACAAGGATTGAGTGCGAATAACAATGCTCTC
TCTGACGGATTTGTGGCATCCGAATCTCATCTACACACCCTATCCCACTC
ACACACCCACACGCCACCAGAATGCGCATTCCTAACGGGCTACTCACATC
CAAGCAGCTCTTCTTCATCTCGGAGGCCATGGCCAAGTACGGGGACGATT
ATGAGGCGGTAGTTGACATCACAACACGGCAAAACCTTCAGCTTCGGGGG
CTCAAGGTAAGACATAGACGAAGAGGCGGTAGAAAAGCAGGAAGGAGAAG
ATCATGGAGATAAGGACCAAAAAAGGGTTGAAATTTATTATTTTCCACAC
CGTCCACACGCACAGCTGGAGGACACAAGCGACCTGATCACAGGCCTGGT
AGAGCTCGGCTTGGGTTCCTACAGCAGTGGCCTCGACAACGTGCGCAACG
TTGTGGGTAGCCCCCTGGCCGGTATTGACTCGCTGGAGGACTTTGACACG
CGCCAGATATGGTAGGTGTGCTTTGGTAGTGTTGGTGTTTGTTGGTGTGA
AGTTCTCTTTTTTGGAGCCTCTCCATGAGTGGTATGTACGGTGGGGTGGC
TGCCGCCGTCCGGCAACGGATGAGTGACGTGCCCCATGCATAATCTTATC
AATCACCAGGACTAACCACACATTCAAATACCAACACACACAACCCTCCC
CCAGTAAGGAGATTAACGATATGGTCACCGGTAACAACAAGGGAAACCCG
GAATGGGCCAACTTACCCCGTAAATTTAACATTGCCGTGTCGGGCTCCCG
TGATGACTATGCACACACGCACATCAACGATATTGGGCTACAGGCGGTGC
GTCACGAGAAGACAGGTGCGTGTGTGTGAGTGTGAGATGCTATGGCCTAG
GTAGGCATCGGTGGGTATGAGATATATGCAAGTATATATGTATATATGTG
AGTACAGCGAGAGATAGTAGAAAGATAGGTAGGTCTATAGATACATACTT
ATTCTTGTCTAGTTACAGAAGCTTTCTGTATCCGTATCTGAATGAGCACC
TGTGGATGCAATAAGTACGAACATGGAAGGCGCGCGCTCACTCTCACATA
CCCATTAACGCCCATTTCAAAACCCCGAACCCAGGCGAGGCTGGCTTCAA
CGTTGTCCTCGGCGGCTATTTCTCGACAAAACGTGCTGCCGGGAGCGTGG
ATCTAAACCTCTGGGTACCTCCTGGCCAGGTGCTCAATCTGTGCTATTCC
ATCCTTCGGGTAAGACCATTCTTTGTGTATAAGTATTTATGAGTGCATAT
GTTTGTTCTTTCGCTGGATTATATTTTCACATTGTAATGTATTGACAGGT
TAACTTGTATTGCTTTTAAAGCTTGATTTTTCAGCGTTCAAATCCTGCCT
TATCCATACATGATTTTTCAATGAAAATATTCCTCCGCAATTCCTCTAGA
TCTTCCGCGACCATGGCCATCGCAAAGACCGTCAAAAAGCACGCCTGCTT
TGGCTCATCGAAGAGTGGGGGTTGGAGACCTTCCGCAACGCTGTGCTTGA
AGAAATGCAGACCAATGCCAAATACGGCGTGGGAGAGGAAAATTCACTGC
CGGTCGACGGGGAACAACGCCATGCTGGTACGATGAACTTTCCTATATTT
ATGGTCCATCATCTAAGCTTGCTTAAACCCATCACTCCTGCATCTCTTCC
TATAATTCGCCTTTGCTCAATCGAGGGCCCGACAAAAAGTCAGTCAATTA
GACTCTAACTTCCTATGTACACTCACACGCACACGCACACAGAACCATCT
TTCGAACGCCGGGATTACTTGGGTGTACACCGCCAAAAACAAACAGGCTA
CTCTTGGGTTGGGCTCCATGTCCCCGTCGGTCGTTTCCGCGCCTTCGAAA
TTCACGAGCTGGGCAGATTAGCGGAGAAATACAGCGGGGGGGAGATGCGA
TTAACGGTGGAACAGAATGTGATCTTTCCCAATGTGCGCGACGAGGAGGT
GGCGTCTTTACTGGCGGATCCCTTTATTGCTGGGGGGCGATTTAAGATTA
ATCCAGGTACATAATATATGAGAACGGGAATGCGTTCATTTATTTGGTAA
AATCTGATAGATTTAGTAATATCTGCACATATACCGTCCTGATGGTTATA
ATCATTTATCCGTCTTATCTGTCTGTGAGTGAACTAGACTCATATGGATC
ATGTCGGGCCAACCTCTTCTTACACCCATTTCCCCTCCCATTACCATTAT
TATCGAAAACGCGCAATAGGACCGATCGCCCGCGGGCTGGTGGCCTGCAC
CGGTGCGCAATTCTGCGGTGTCGGGCTTGTGGAGACGAAGACCCGAGCCA
TTGAGCTAGCCGAGAAGCTGGAGGCCGCATATGACATTCCTCAGACAGTG
CGCATGCACTTCTCCGGGTGCCCTAACAGCTGCGGACAGAGTCAGGTGGC
GGACATTGGCTTGATGGGCGCGCCGGCCAAAAAGGATGGAAAGGCCGTAG
AAGGCGTGGATGTCTTCCTGGGCGGTGCTGTAGGAGAAGGTGGGTGGGTG
TTAGGTGTTAATATACACTACTTTATGGGAGGAAGGGTGTTTCTTTGTGT
GTACGCATGAGTACTGAACATCCCACTCCTGCTCGCTTGCCTGATGTCCC
TACCTTTTCTTCATATTTTTTTTGGGACATAAATCTCCGCACCCTCATTC
ACTCTGAACTCTTTTCTCACACCCTTCTCCAAATCCAAACCCACCTACCA
CAGAGGCGGCGCTGGGCGAGAAATTCCTAAAAAACGTCGCCATGGGGGAG
GAAGACTCTGACGTTCTTAGCGCGTTGGGCGAGCTCTTGGTTGAGCGCTT
CGGGGCGGTGAAGAAGTAG back to topCoding sequence (CDS) from alignment at chr26:244831..248649+ >NO26G00710.1 ID=NO26G00710.1|Name=NO26G00710.1|organism=Nannochloropsis oceanica|type=CDS|length=1956bp|location=Sequence derived from alignment at chr26:244831..248649+ (Nannochloropsis oceanica)
ATGGCCCACCCTCGCCTCGCCCTATTGGCAACTGCCGCCCTCCTGCTATC
TGGCGCCGTCACATCCAGCGCCCGTCGGCAGCAAGCCTTCGTCGCCCTCA
GAGCTGGTCTCCACACGCGCGGCATTTGCCGAAGCTACAATGATGCAAGC
CCCCGCTCTGTGACCCCGCCGACCCACGCGCCCTCCTCTACCCTCGACGC
CCCTGGCGTAGCAGAAAAAACAACCGAGCGTGAAATTATCAACTTCCGCC
CCAAGGTGGAGCTTCCCCCTAAGGTTCAGGAATTGTTCGGAACGCCGCCT
GCCATGACAGGCACAGATTACCTGCCGGCCGAGACGCTGGCCCGCGCCCA
GAAGGGTAGCTTCCTCGAGAAGATAAAGCTTAAGAAGGACGGCTCGGTAG
CGTGGCGCGAGGTACACGAGCTCGCTGCCCTCCTCCGCTCGGGACAATAC
ACCTGGGAAGAGCTGGACTTGGCAACGGACACCGATGACATGGACCAGCG
GCTTAAGTACGCCGGTATTTTCCACAGGCGCAAGCGCACCCCTGGGCGCT
TCATGATGCGAATGCGCATTCCTAACGGGCTACTCACATCCAAGCAGCTC
TTCTTCATCTCGGAGGCCATGGCCAAGTACGGGGACGATTATGAGGCGGT
AGTTGACATCACAACACGGCAAAACCTTCAGCTTCGGGGGCTCAAGCTGG
AGGACACAAGCGACCTGATCACAGGCCTGGTAGAGCTCGGCTTGGGTTCC
TACAGCAGTGGCCTCGACAACGTGCGCAACGTTGTGGGTAGCCCCCTGGC
CGGTATTGACTCGCTGGAGGACTTTGACACGCGCCAGATATGTAAGGAGA
TTAACGATATGGTCACCGGTAACAACAAGGGAAACCCGGAATGGGCCAAC
TTACCCCGTAAATTTAACATTGCCGTGTCGGGCTCCCGTGATGACTATGC
ACACACGCACATCAACGATATTGGGCTACAGGCGGTGCGTCACGAGAAGA
CAGGCGAGGCTGGCTTCAACGTTGTCCTCGGCGGCTATTTCTCGACAAAA
CGTGCTGCCGGGAGCGTGGATCTAAACCTCTGGGTACCTCCTGGCCAGGT
GCTCAATCTGTGCTATTCCATCCTTCGGATCTTCCGCGACCATGGCCATC
GCAAAGACCGTCAAAAAGCACGCCTGCTTTGGCTCATCGAAGAGTGGGGG
TTGGAGACCTTCCGCAACGCTGTGCTTGAAGAAATGCAGACCAATGCCAA
ATACGGCGTGGGAGAGGAAAATTCACTGCCGGTCGACGGGGAACAACGCC
ATGCTGAACCATCTTTCGAACGCCGGGATTACTTGGGTGTACACCGCCAA
AAACAAACAGGCTACTCTTGGGTTGGGCTCCATGTCCCCGTCGGTCGTTT
CCGCGCCTTCGAAATTCACGAGCTGGGCAGATTAGCGGAGAAATACAGCG
GGGGGGAGATGCGATTAACGGTGGAACAGAATGTGATCTTTCCCAATGTG
CGCGACGAGGAGGTGGCGTCTTTACTGGCGGATCCCTTTATTGCTGGGGG
GCGATTTAAGATTAATCCAGGACCGATCGCCCGCGGGCTGGTGGCCTGCA
CCGGTGCGCAATTCTGCGGTGTCGGGCTTGTGGAGACGAAGACCCGAGCC
ATTGAGCTAGCCGAGAAGCTGGAGGCCGCATATGACATTCCTCAGACAGT
GCGCATGCACTTCTCCGGGTGCCCTAACAGCTGCGGACAGAGTCAGGTGG
CGGACATTGGCTTGATGGGCGCGCCGGCCAAAAAGGATGGAAAGGCCGTA
GAAGGCGTGGATGTCTTCCTGGGCGGTGCTGTAGGAGAAGAGGCGGCGCT
GGGCGAGAAATTCCTAAAAAACGTCGCCATGGGGGAGGAAGACTCTGACG
TTCTTAGCGCGTTGGGCGAGCTCTTGGTTGAGCGCTTCGGGGCGGTGAAG
AAGTAG back to top
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