NO23G01930.1, NO23G01930.1 (mRNA) Nannochloropsis oceanica | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	NO23G01930.1
Unique Name	NO23G01930.1
Type	mRNA
Organism	Nannochloropsis oceanica (N. oceanica IMET1)
Sequence length	3762
Alignment location	chr23:696991..703834 +

Link to JBrowse

Properties

Mutants

Expression

No biomaterial libraries express this feature.

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
chr23	genome	chr23:696991..703834 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Gene prediction for N. oceanica IMET1	2017-10-24
Homology annotation for N. oceanica IMET1	2017-10-25
InterPro analysis for N. oceanica IMET1	2017-10-25

Annotated Terms

Homology

[Close]

BLAST of NO23G01930.1 vs.
Match: EWM27840.1 (folate biopterin transporter [Nannochloropsis gaditana])

HSP 1 Score: 923.3 bits (2385), Expect = 5.100e-265
Identity = 494/723 (68.33%), Postives = 563/723 (77.87%), Query Frame = 0

Query:   73 MDVAEGKQSKDSLPIEDDRNPIMIIRSGGCSSSSCSSSSGCNGGHTVTNNTDRREGSSDIPSPSHCSPPPRRLIVDIRQNSYHHYQNKQDEEEEDEQEEGGMEEGRTLRASSRCDGEEERRESRLGGLYRSQSEGTLTMRKGRSFFSIGVGAPSPRRSSSRGANVERGTAMPSPRSRLPRLSPRAISMLSPRNLLR-KKPRPMALKTEGSAFDGIPSPPALQSQRTKLICENNSYYRWAEEEARYTDPHQLVSPWSSLNIAMPLSAFFFQLTSTFFSVPIAYYVIKNLGMNAAATNVAQQMTRLPQAFQIPIGLLTDCVPIRKRRRKHYILIGWLLHIGAMTALAVVGEPDITSLVGLIFLSFTGGQIMDLAQRALIIQRSRHEREDQKGVLMVTVNLGWTWGNMIGYILGTFSYESNFNNGGGMSIGNIATFNACIGAAFLPFLVTLYDTKVNAISKTRPMGEEMADVWAMVQRKSVLMPMLFVGIFQVFWVPNSVWTIFLVEGLHFTEWNIGLMGLLGSILGACGASMYRLCFMHVSWRKIFVFTSLIMAGMNCLTLLLVFRVNKTWGISDYFFASGDNLVESLVDGFHIMPISIMYMGLCPGGAEGTALAAIQTFASLAVMMSSNIGLLFLRIWDVDGGTIAAGNFEGVWKITLLCGLFQLVGVFFVKLLPRNAKHQEILQSFDRNIVWGGICFIAFVILAFILTIGLNVTYMVHGDLVS 795
            MDVA+  +  D+ P                SSS  SS SG   G +  N+ D     + +P P   +P  RRL+++ RQNS H Y++   E +    EEGG E G         DG E       G       + T   +K  SFFSIG G                G    SPRSRL RLSPR    +SPRN L+  K RPMALKTEGS+F+ IP PP L SQ TKLI ENNSY RWAEEEARYTDP QLVSPWSSLN+A+ L AF FQLTSTFFSVP+A+YVIKNLGMNAAA NVAQQMT+LPQA QIPIGLLTDCVPI+KRRRK+Y+L+GWLLHI +MTALA+VGEPDI+SLVGLIFLSF GGQIMDL+QRALI+QRSRHE  ++KGVLMVTVNL WTWGNM+G++LGTF YESNF NGGGMS+ NIATFNA +G AFLPFL TLYD K+N+I+KTRP+ EEMADVW+MVQRKSVLMPMLFVGIFQ+FWVPNS W++FL+EGL+F+EW+IGLMGLLGS+LGACGA++YRLC M  +WRKIFVFTS IMAGMN LTLLLVFRVN  WGISDYFFA GDNL+ES+VDGFHIMPISIMYMGLCPGGAEGTALAAIQTFASLAVM S+NIGLLFL+IWDV   TIAAGNFEGVW++TLLCGL QLVGV FVKLLPRNAKHQE+LQSFDRNIVWGGICFI+FV++AF+ TI L+VTYMVHGDL S
Sbjct:    1 MDVADENRQGDNTPTN-------------ASSSLRSSRSGSMDGGS--NSHDDNSEEAILPLPPQ-APSTRRLVLNTRQNSIHTYES---ERQASRLEEGGGEGG---------DGGEGGEGGSTG------RKATTPTQKLASFFSIGEGG---------------GLGSLSPRSRLSRLSPRGSFRISPRNFLKLNKRRPMALKTEGSSFENIPPPPGLTSQHTKLISENNSYCRWAEEEARYTDPEQLVSPWSSLNVAITLGAFLFQLTSTFFSVPLAFYVIKNLGMNAAAINVAQQMTQLPQALQIPIGLLTDCVPIKKRRRKYYVLLGWLLHIASMTALAIVGEPDISSLVGLIFLSFLGGQIMDLSQRALIVQRSRHENLERKGVLMVTVNLAWTWGNMLGFVLGTFCYESNFQNGGGMSLANIATFNAAVGVAFLPFLYTLYDPKINSITKTRPIREEMADVWSMVQRKSVLMPMLFVGIFQIFWVPNSAWSVFLIEGLNFSEWHIGLMGLLGSVLGACGAALYRLCLMKTNWRKIFVFTSFIMAGMNSLTLLLVFRVNLRWGISDYFFAMGDNLIESMVDGFHIMPISIMYMGLCPGGAEGTALAAIQTFASLAVMTSTNIGLLFLKIWDVGAETIAAGNFEGVWRLTLLCGLCQLVGVCFVKLLPRNAKHQEMLQSFDRNIVWGGICFISFVVIAFMATIVLDVTYMVHGDLES 674

The following BLAST results are available for this feature:

BLAST of NO23G01930.1 vs.

BLAST of NO23G01930.1 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 1


Match Name	E-value	Identity	Description
EWM27840.1	5.100e-265	68.33	folate biopterin transporter [Nannochloropsis gadi...	[more]

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
NO23G01930	NO23G01930	Nannochloropsis oceanica (N. oceanica IMET1)	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
NO23G01930.1	NO23G01930.1-protein	Nannochloropsis oceanica (N. oceanica IMET1)	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
NO23G01930.1.cds1	NO23G01930.1.cds1	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO23G01930.1.cds2	NO23G01930.1.cds2	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO23G01930.1.cds3	NO23G01930.1.cds3	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO23G01930.1.cds4	NO23G01930.1.cds4	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO23G01930.1.cds5	NO23G01930.1.cds5	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO23G01930.1.cds6	NO23G01930.1.cds6	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO23G01930.1.cds7	NO23G01930.1.cds7	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO23G01930.1.cds8	NO23G01930.1.cds8	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO23G01930.1.cds9	NO23G01930.1.cds9	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO23G01930.1.cds10	NO23G01930.1.cds10	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO23G01930.1.cds11	NO23G01930.1.cds11	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO23G01930.1.cds12	NO23G01930.1.cds12	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO23G01930.1.cds13	NO23G01930.1.cds13	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO23G01930.1.cds14	NO23G01930.1.cds14	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO23G01930.1.cds15	NO23G01930.1.cds15	Nannochloropsis oceanica (N. oceanica IMET1)	CDS

Sequences

The following sequences are available for this feature:

mRNA sequence
protein sequence
mRNA from alignment at chr23:696991..703834+
coding sequence from alignment at chr23:696991..703834+

mRNA sequence

>NO23G01930.1 ID=NO23G01930.1|Name=NO23G01930.1|organism=Nannochloropsis oceanica|type=mRNA|length=3762bp
GCTTCAACGGGCCCTCCAAATCATGAACGGGTTAATCAAGTTCACTCCCG
ACTGCCTGCTGCGAGGCACCGGCCAACAAGACGGTGTTACGATATAATCA
ATCGATAGCTAGAGTGTATGAATGACTCGCTGATACGTGTCCATCCCTAA
CCATCCACAGTTACCCTCGTTTGATAACTTCATGGATACGAACCACCCAC
CAAATATTTCCAGTAATCAAGATGCTTGATCAGGGTCTATACCTCACAAA
AGAGTCTGAATTAAGATGAAAAGTAATGACCAAACAACTGAATAAAAGCG
CGCGACGGCATGATTTTTCTCCAGACTGGCCTGGGTGGCTGCAACGGCAT
CATCCTATTTTTGCGGACGAAAAATGCACACACGTCGTCGCTTGAATCTT
TTATGTCCCATCGCAGCAGCGGCAGACGGAGTACTACTAAAGTCCTAACA
TTGGCTTGTCGCGCCCTCATTTCTCTTCTTTTCCCTCCTCCTACAGAACT
ACACCTTATTGTCTGCCTTGTGACCATGGATGTTGCTGAGGGGAAGCAGT
CAAAAGACAGCCTCCCCATTGAAGACGACCGTAACCCGATAATGATAATA
AGGAGCGGCGGCTGCAGCAGTAGTAGCTGCAGTAGCAGTAGTGGATGTAA
TGGTGGTCACACTGTCACCAACAACACCGACAGACGAGAAGGAAGCTCCG
ACATTCCTTCCCCTTCTCACTGTTCTCCACCGCCGCGTCGTCTCATTGTG
GATATCAGGCAGAATTCTTACCACCACTACCAAAATAAACAAGACGAAGA
GGAGGAAGATGAGCAAGAGGAGGGTGGAATGGAGGAAGGTAGAACATTAA
GAGCAAGTTCTAGATGTGATGGAGAAGAAGAAAGAAGGGAATCAAGACTA
GGCGGATTGTATCGATCACAAAGTGAAGGAACGCTCACTATGAGAAAAGG
TCGCTCCTTTTTCAGCATAGGGGTTGGGGCACCCTCCCCTCGCCGCAGCA
GCAGCAGAGGAGCCAACGTTGAAAGAGGGACAGCCATGCCCTCTCCTCGC
TCCCGACTTCCTCGTCTTTCCCCACGGGCGATTTCGATGCTCTCGCCGCG
CAACCTGTTGAGGAAGAAGCCGAGACCGATGGCGCTGAAGACGGAGGGCT
CTGCTTTCGACGGAATCCCTTCCCCTCCGGCCCTGCAATCCCAACGCACG
AAGCTCATCTGCGAGAACAACAGCTACTATCGGTGGGCCGAGGAAGAAGC
CCGCTACACAGACCCCCACCAGCTCGTCTCCCCCTGGTCCTCTCTCAACA
TCGCCATGCCTCTCAGTGCCTTTTTCTTCCAGCTTACATCTACCTTCTTC
TCTGTCCCCATAGCCTACTACGTCATCAAGAACCTGGGAATGAATGCTGC
CGCTACCAACGTCGCGCAGCAAATGACACGACTCCCACAAGCCTTCCAAA
TCCCCATCGGGCTCCTCACGGACTGTGTGCCCATTCGAAAGCGGCGTCGG
AAGCACTACATTCTCATCGGATGGCTCCTCCACATTGGAGCCATGACAGC
CCTCGCCGTCGTGGGCGAGCCAGACATCACCTCCCTCGTAGGACTGATCT
TCCTCTCCTTCACGGGCGGACAAATCATGGACCTGGCCCAGCGCGCCCTC
ATCATCCAGCGGTCACGCCACGAGAGGGAGGACCAGAAGGGCGTGCTGAT
GGTCACAGTAAACCTCGGCTGGACCTGGGGCAACATGATTGGCTATATCT
TGGGGACATTCAGCTATGAAAGCAATTTTAACAACGGCGGGGGCATGAGC
ATAGGCAATATTGCGACATTTAATGCCTGTATTGGGGCTGCCTTTTTGCC
CTTCCTCGTCACGCTTTACGACACCAAGGTCAATGCAATCTCTAAGACCC
GCCCCATGGGCGAGGAGATGGCGGATGTTTGGGCCATGGTGCAGCGGAAG
AGTGTCTTGATGCCCATGCTCTTCGTGGGGATCTTCCAAGTCTTCTGGGT
GCCCAACAGCGTTTGGACCATCTTCCTCGTCGAGGGTCTGCACTTTACCG
AATGGAACATCGGGCTGATGGGCTTGCTTGGGAGCATTTTAGGTGCCTGC
GGTGCATCCATGTATCGGCTTTGCTTCATGCACGTCAGCTGGAGGAAAAT
CTTTGTATTTACCTCCCTCATTATGGCGGGGATGAACTGCCTAACCCTTC
TCTTGGTCTTCAGGGTGAACAAGACGTGGGGCATCTCGGACTACTTCTTC
GCATCGGGCGACAACCTGGTCGAGTCCCTGGTGGACGGCTTCCATATCAT
GCCTATCAGCATAATGTACATGGGTCTCTGCCCCGGCGGGGCGGAGGGGA
CAGCGCTCGCCGCTATTCAGACGTTTGCCTCGTTGGCCGTAATGATGAGT
AGCAATATAGGTCTCCTTTTTCTCCGCATCTGGGACGTCGATGGCGGAAC
TATTGCGGCCGGCAATTTCGAAGGCGTATGGAAAATCACCCTGCTCTGTG
GCCTGTTTCAGCTCGTGGGCGTCTTCTTCGTGAAGCTATTGCCGCGCAAC
GCGAAGCACCAAGAAATCCTGCAGTCATTCGATCGGAACATAGTGTGGGG
TGGAATCTGCTTCATCGCTTTTGTTATCCTTGCCTTCATTCTAACCATCG
GTCTAAATGTGACATATATGGTGCACGGCGACCTCGTATCCTGAGCCTCA
CCATTTCTCTGGCTGCTTGACTGCGGATAGGAAAGAGATACATAACAGCA
GTAGTCATGTTGAGCTTAATAGGCCAACATCTCAACTGTGGTCTAGAGAA
AAAATGGTTTGGTAATAGCTTGTGTTTGTATCTATTAAGGTGTGAGATTC
ATGTTGTGCATAGAACTATGAGTCTCAGGCTGAAATATAGGCAGTGCTTC
ATGAATGTAGACAAGTTGGGTTCGTCCAAGGGCACAGATGCCTTGGAAGA
CGTCAAACCCCATAAGTAAGGAGGAGTATGTGAATAGGTTGCATGGCCCG
GGCGGGCTTATTTTGGTGCTCAAAATATGATAGAAGGAGATGTCTTTATG
CCGGTGACAAGGCTCGTTACAGTGATTACAACCCCAAAAAAGTGAAAAGA
GCAAAAAACTTACATAACTTTCTGTATAGTCAGTGAGGGATTTAGCAATT
GCTGGGGGAGTAGGGACATAGAGCAGGATGGAGTAAAGCAAAGCAGGATG
AGGGTTGAGAAGAGGATGAAGCGAAAGCGGATGTGGTTAAGGAGGAGGAG
GGACGGAAGGAAGACATAGAACAGAGAGAAGAGATGAAGATACCTCTTAA
ACGGAGGACATAGAGACAAGGAACATTAAGGGAAATAGAATGAAGGTAAT
AAGATAGAGGAAGCAAATAACCTTTTGCCCACGGTTGCAGTCTCTATTAT
CAGCTCTTTTCCATGTATGGGACACATGTTCGCATAATTTAATGGACCAT
GCAGGGAAGGAATTAGATATCTTCAGCACATATAGGCAATTGAATGGGGA
TATATCGATGCTGCAGATGCAGCGATTCGATAGAAAATTCTCGAATTTCT
AGCACCGGAATTCTGATCATCTGTGATGATTGCTTGGGGCTCTGGAAAAA
GTGGTTCAGAATGATACAAGATGTAAAAATGTTGATCATAGTGCTTTCAT
CGAGGGAGAATCAGAGGAACTATCTCCCGCATATTACCCTTTGCCTTTCG
TTTTGTTTGAGTTCAAGAAATGAGTCAGAGCTCTAGACCATGGCAAATAG
CAAAGCGCCGAG

protein sequence of NO23G01930.1

>NO23G01930.1-protein ID=NO23G01930.1-protein|Name=NO23G01930.1|organism=Nannochloropsis oceanica|type=polypeptide|length=795bp
MIFLQTGLGGCNGIILFLRTKNAHTSSLESFMSHRSSGRRSTTKVLTLAC
RALISLLFPPPTELHLIVCLVTMDVAEGKQSKDSLPIEDDRNPIMIIRSG
GCSSSSCSSSSGCNGGHTVTNNTDRREGSSDIPSPSHCSPPPRRLIVDIR
QNSYHHYQNKQDEEEEDEQEEGGMEEGRTLRASSRCDGEEERRESRLGGL
YRSQSEGTLTMRKGRSFFSIGVGAPSPRRSSSRGANVERGTAMPSPRSRL
PRLSPRAISMLSPRNLLRKKPRPMALKTEGSAFDGIPSPPALQSQRTKLI
CENNSYYRWAEEEARYTDPHQLVSPWSSLNIAMPLSAFFFQLTSTFFSVP
IAYYVIKNLGMNAAATNVAQQMTRLPQAFQIPIGLLTDCVPIRKRRRKHY
ILIGWLLHIGAMTALAVVGEPDITSLVGLIFLSFTGGQIMDLAQRALIIQ
RSRHEREDQKGVLMVTVNLGWTWGNMIGYILGTFSYESNFNNGGGMSIGN
IATFNACIGAAFLPFLVTLYDTKVNAISKTRPMGEEMADVWAMVQRKSVL
MPMLFVGIFQVFWVPNSVWTIFLVEGLHFTEWNIGLMGLLGSILGACGAS
MYRLCFMHVSWRKIFVFTSLIMAGMNCLTLLLVFRVNKTWGISDYFFASG
DNLVESLVDGFHIMPISIMYMGLCPGGAEGTALAAIQTFASLAVMMSSNI
GLLFLRIWDVDGGTIAAGNFEGVWKITLLCGLFQLVGVFFVKLLPRNAKH
QEILQSFDRNIVWGGICFIAFVILAFILTIGLNVTYMVHGDLVS*

mRNA from alignment at chr23:696991..703834+

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>NO23G01930.1 ID=NO23G01930.1|Name=NO23G01930.1|organism=Nannochloropsis oceanica|type=mRNA|length=6844bp|location=Sequence derived from alignment at chr23:696991..703834+ (Nannochloropsis oceanica)
GCTTCAACGGGCCCTCCAAATCATGAACGGGTTAATCAAGTTCACTCCCG
ACTGCCTGCTGCGAGGCACCGGCCAACAAGACGGTGTTACGATATAATCA
ATCGATAGCTAGAGTGTATGAATGACTCGCTGATACGTGTCCATCCCTAA
CCATCCACAGTTACCCTCGTTTGATAACTTCATGGATACGAACCACCCAC
CAAATATTTCCAGTAATCAAGATGCTTGATCAGGGTCTATACCTCACAAA
AGAGTCTGAATTAAGATGAAAAGTAATGACCAAACAACTGAATAAAAGCG
CGCGACGGCATGATTTTTCTCCAGACTGGCCTGGGTGGCTGCAACGGCAT
CATCCTATTTTTGCGGACGAAAAATGCACACACGTCGTCGCTTGAATCTT
TTATGTCCCATCGCAGCAGCGGCAGACGGAGTACTACTAAAGTCCTAACA
TTGGCTTGTCGCGCCCTCATTTCTCTTCTTTTCCCTCCTCCTACAGAACT
ACACCTTATTGTCTGCCTTGTGACCATGGATGTTGCTGAGGGGAAGCAGT
CAAAAGACAGCCTCCCCATTGAAGACGACCGTAACCCGATAATGATAATA
AGGAGCGGCGGCTGCAGCAGTAGTAGCTGCAGTAGCAGTAGTGGATGTAA
TGGTGGTCACACTGTCACCAACAACACCGACAGACGAGAAGGAAGCTCCG
ACATTCCTTCCCCTTCTCACTGTTCTCCACCGCCGCGTCGTCTCATTGTG
GATATCAGGCAGAATTCTTACCACCACTACCAAAATAAACAAGACGAAGA
GGAGGAAGATGAGCAAGAGGAGGGTGGAATGGAGGAAGGTAGAACATTAA
GAGCAAGTTCTAGATGTGATGGAGAAGAAGAAAGAAGGGAATCAAGACTA
GGCGGATTGTATCGATCACAAAGTGAAGGAACGCTCACTATGAGAAAAGG
TCGCTCCTTTTTCAGCATAGGGGTTGGGGCACCCTCCCCTCGCCGCAGCA
GCAGCAGAGGAGCCAACGTTGAAAGAGGGACAGCCATGCCCTCTCCTCGC
TCCCGACTTCCTCGTCTTTCCCCACGGGCGATTTCGATGCTCTCGCCGCG
CAACCTGTTGAGGAAGAAGCCGAGACCGATGGCGCTGAAGACGGAGGGTG
AGGGTAACGAGATTTGGAGGGAGGGAGGGAGGGAGAAGGACAATAAAAGC
TGGTTCGATGAATTGATAACGCATTTTATCAATACCCGTTTCTCTTCCCC
TCCCTTCCTCCCTCCCTCCCTCCTTTCTTCCTAGGCTCTGCTTTCGACGG
AATCCCTTCCCCTCCGGCCCTGCAATCCCAACGCACGAAGCTCATCTGCG
AGAACAACAGCTACTATCGGTAAGAGCCAGGATCAGAGGGAAGGAAGAGA
ACGATAGACAGGTAGATGATGTACCACTTTCAGCACCATCTTACCTCTCC
TTTCCCCTTTCCCTCCTCCCTCCCTCCATGTCGCATCCCTAGGTGGGCCG
AGGAAGAAGCCCGCTACACAGACCCCCACCAGCTCGTCTCCCCCTGGTCC
TCTCTCAACATCGCCATGCCTCTCAGTGCCTTTTTCTTCCAGCTTACATC
TACCTTCTTCTCTGTCCCCATAGCCTACTACGTCATCAAGAACCTGGGAA
TGAATGCTGCCGCTACCAACGTCGCGCAGCAAATGACAGTGAGTGTCCTT
CCCTCCTTCCCTTCCTTCCTCCCTCCCTCCCTCGCCTCGCCATTCCTTTT
CTCCGGACTCAAAATCCAAACGATCAATTCTATCCTCCCTCCCACCATAT
CCCCACACTCTTCCCGCAGCGACTCCCACAAGCCTTCCAAATCCCCATCG
GGCTCCTCACGGACTGTGTGCCCATTCGAAAGCGGCGTCGGAAGGTAAGG
AGGGAGAAAGGGAGGCAAAGGGAACGGAAGACAGGTTAGAACGGGAAGGC
AGCAGGAAGAAAAAGAAAGATAAGAAGGTGAAATAGAAGGAAAGAGGTAA
GAGCGTTTGGAGAGAGGGAGGGGCCGAGGGTTAAAATCAACACGTGCCGC
GTGACGATAATGTGTTTCTCCACCGTTCAGATTTCCTCAACGCCCCGTCC
TCTCTTCATCCTCTCCTCCCTCAGCACTACATTCTCATCGGATGGCTCCT
CCACATTGGAGCCATGACAGCCCTCGCCGTCGTGGGCGAGCCAGACATCA
CCTCCCTCGTAGGACTGGTGTGTGCTATCCCTCCATCCGGCTCTTCCCCT
AACCCCTTACACTTTCTACGTGGCACTTATTACCTCTCCCTGTCTCAATC
CGCGCTTTCAGATCTTCCTCTCCTTCACGGGCGGACAAATCATGGACCTG
GCCCAGCGCGCCCTCATCATCCAGCGGTCACGCCACGAGAGGGAGGACCA
GAAGGGCGTGCTGATGGTCACAGTAAACCTCGGCTGGACCTGGGGCAACA
TGATTGGTGAGTTCTTCTGTTTATCTCTCTTTGTCTCTTCCTTCTTCTAT
CCCACATTTCTCCTTTATCCAGTGGTCCTTCCGTTTTACATCAGAAAACA
TTACACTAGATGGCGTACGTAACACTCTCCCTCTCTCCCACCGCACTTTC
GCCCTCCTTTTCTGTCTATTCAGGCTATATCTTGGGGACATTCAGCTATG
AAAGCAATTTTAACAACGGCGGGGGCATGAGCATAGGTCGGTAGCGAGGA
AGGGAGAGAGACAGGGTGGGAGGAATGACGAAGCCTTGGGCTCCGAAAGA
TGTATTCATTCATGCTCCTCCCTCGCTTCCTTCCTTTATCTCTCCCTCCC
CCCCTCATGCCAGGCAATATTGCGACATTTAATGCCTGTATTGGGGCTGC
CTTTTTGCCCTTCCTCGTCACGCTTTACGACACCAAGGTCAATGCAGTAA
GTGAAAGGGTGGGGGCGGGGCAAAGGATGGATGAAAATAGGGAGCAAGAG
GAAGGGCCTCCGATGGATTGTACGTGTTGGCTGTACACTCCAGCGGACCC
GAGAGCAGGAGAAAGGAGGGAAAGATAAGGCTAGTGTACAGCATAGGCTG
ATCTATGGCTAAGCCTGATTAGTCGTCTATTCATATCTCCCTCCCTCCCT
CCCACCCTCCCCTCATCTCTCCCCCGAAACCCCTTCCCCAGATCTCTAAG
ACCCGCCCCATGGGCGAGGAGATGGCGGATGTTTGGGCCATGGTGCAGCG
GAAGAGTGTCTTGATGCCCATGCTCTTCGTGGGGGTAAAGAGGGAGGAAG
AGAGGGAGGGGGGAGGCAGGGAGAAAGGAGGAGACAAATGGTTGGGTAGA
TGATGAGACATGATATTTCTGCCTTTCCTGTCCTTTGGATGGCTCGTCAA
TCTATCTCTTTTTTCTCATAACTTGCATCCGTCCCATCTCGCTGTCTTCC
CTCCAGAGCTTCCGGTTCCAGACACATTCGAGCTCTCCTTCCTTTCTCCC
CTTCTCCTTCCTTTCTCCCCTTCTCCCTCCTTCCATCCTGTCATCCTTCC
ATCCTTCCCTCAACCTTCAGAAGGCAGATATATGTACACATATAAAGATA
GACAGACAGATAGATAGATAAATAGATATATTTATATCTAGACATATTTT
GGGTTCGCTCTTTGATTCAAACAACTCACATCTTCCCTCCCTATCTGCCT
ACCTCCCCTAATCCCTTGCACGATGCAGATCTTCCAAGTCTTCTGGGTGC
CCAACAGCGTTTGGACCATCTTCCTCGTCGAGGGTCTGCACTTTACCGAA
TGGAACATCGGGCTGATGGGCTTGCTTGGGAGCATTTTAGGTATTTGGGT
AATGGGAGCGGGAGGGAAGGTTCTAGTTGTTGTTTAAGGTCACGACTCAT
CTCACTCACTCCTCCTTCCCTATCTCCCCCCCCCCCCCTTGAGGTGCCTG
CGGTGCATCCATGTATCGGCTTTGCTTCATGCACGTCAGCTGGAGGAAAA
TCTTTGTATTTACCTCCCTCATTATGGCGGGGATGAACTGCCTAACCCTT
CTCTTGGTCTTCAGGGTGAACAAGACGGTAGGTACTCCTGCATCTCTTCC
TTTCTCCCTCTCTTTTGCCTTTCTCTTTCCTTCGGACTAGCCGCCATAAG
TGTCTTCTCTTCGTACTCTTTCTCCCTTTTTCTCCTTGTCTCCCGCATAC
CTTCACTTCTTCGCACGGTCTTTTCCATCGTTCTCAAAAACGCGTATTTT
CCCCCTCCCTCAATTCAGCCCTTCCTTAGTAATGGGGTATCTATCTCCTA
CCACTCTGTTGCCTTTTTTTTGTTGCTCCTATGGAAAATAATGCACTCTC
TCATCATCCCTTCATCTCTTTCTCTTCCCTCTCCAGTGGGGCATCTCGGA
CTACTTCTTCGCATCGGGCGACAACCTGGTCGAGTCCCTGGTGGACGGCT
TCCATATCATGCCTATCAGTAAGAAAGGAAGGGAGCCAAAATGGGGAAGG
GAAAAGTGTGCTTCCTTTTAAGATTTTCATAAAATAGGAGAGAAGAGGGG
AATGAGGGATGGAGGGAAGATTATGGAAATACAAATTCTCTCTTTTACTC
GGTGGATCTTTTGGGAGATTGATATTGATCCTTGTTAGCCTAATAGAACA
CCGTAACATTCGATGCGGCGTGTGTACCCATCGACCTTTCAGGACGGAAA
ATACTGTGCATAGGACGGGAGGGTGACGTGCTAGTGAATTTCTCACGGTC
CATTATGCAGGCCAATATCTCATTACCTCGTCAATGGGACTATGTCTTAG
GAAAAACTAGTACAGGCCGCATAGCAACCCTACTTACGTGACTATATATA
TAACTGATACTTGAATCTGATGAAAATCCTTATCCATGCGAAATGAACTC
ATAAGCCAAGCCAAGGAATTATGATCAGCGTATTTCAAATGTGGGGCTGT
CATGCGCTCCGAATGTAGGCAGCCTAGGTGGTCCTTTTTCGCTCTGCCTC
CAAGAGCCTCTCCCTCATCGCTTAACTCCTCTCCCTCTATCCCTTACTCA
TTCTCTCCCTTCCTCAGGCATAATGTACATGGGTCTCTGCCCCGGCGGGG
CGGAGGGGACAGCGCTCGCCGCTATTCAGACGTTTGCCTCGTTGGCCGTA
ATGATGAGTAGCAATATAGGTAGGCTTACATGGGATTAGCAGTGGAGGGA
GGGTAAAATGGAGGGATGGACAGTAAGTAATGGCTTCTTCCCAAATCTGT
CCCTCGTTGTCTTTACGACGTTGCCTTAGTGACTAAATCTTTTAGCATGT
AATTGAGACAAAGGAGAGAGAGGGTAGATTGGGAAACAATAATGTTTCAT
AGACAAACTCACATAGTCATGAGACTTCGTCCTTCCCTTCCCCCTCCCCC
TCTTCCCTTCTTTTTCTCCTTTCCCCCTTCCGCCAGGTCTCCTTTTTCTC
CGCATCTGGGACGTCGATGGCGGAACTATTGCGGCCGGTAAGTCTTTCTT
CCCCCTTCTTCCTTCCTTCCTCCCCATCTCCCCTCTTTCTTTCCATGCCT
TCTGCAACTTAGATTCACTTTTTTCCTCCCCTTCTATCGGTAGGCAATTT
CGAAGGCGTATGGAAAATCACCCTGCTCTGTGGCCTGTTTCAGCTCGTGG
GCGTCTTCTTCGTGAAGCTATTGCCGCGCAACGCGAAGCACCAAGAAATC
CTGCAGTCATTCGATCGGAACATAGTGTGGGGTGGAATCTGCTTCATCGC
TTTTGTTATCCTTGCCTTCATTCTAACCATCGGTCTAAATGTGACATATA
TGGTGCACGGCGACCTCGTATCCTGAGCCTCACCATTTCTCTGGCTGCTT
GACTGCGGATAGGAAAGAGATACATAACAGCAGTAGTCATGTTGAGCTTA
ATAGGCCAACATCTCAACTGTGGTCTAGAGAAAAAATGGTTTGGTAATAG
CTTGTGTTTGTATCTATTAAGGTGTGAGATTCATGTTGTGCATAGAACTA
TGAGTCTCAGGCTGAAATATAGGCAGTGCTTCATGAATGTAGACAAGTTG
GGTTCGTCCAAGGGCACAGATGCCTTGGAAGACGTCAAACCCCATAAGTA
AGGAGGAGTATGTGAATAGGTTGCATGGCCCGGGCGGGCTTATTTTGGTG
CTCAAAATATGATAGAAGGAGATGTCTTTATGCCGGTGACAAGGCTCGTT
ACAGTGATTACAACCCCAAAAAAGTGAAAAGAGCAAAAAACTTACATAAC
TTTCTGTATAGTCAGTGAGGGATTTAGCAATTGCTGGGGGAGTAGGGACA
TAGAGCAGGATGGAGTAAAGCAAAGCAGGATGAGGGTTGAGAAGAGGATG
AAGCGAAAGCGGATGTGGTTAAGGAGGAGGAGGGACGGAAGGAAGACATA
GAACAGAGAGAAGAGATGAAGATACCTCTTAAACGGAGGACATAGAGACA
AGGAACATTAAGGGAAATAGAATGAAGGTAATAAGATAGAGGAAGCAAAT
AACCTTTTGCCCACGGTTGCAGTCTCTATTATCAGCTCTTTTCCATGTAT
GGGACACATGTTCGCATAATTTAATGGACCATGCAGGGAAGGAATTAGAT
ATCTTCAGCACATATAGGCAATTGAATGGGGATATATCGATGCTGCAGAT
GCAGCGATTCGATAGAAAATTCTCGAATTTCTAGCACCGGAATTCTGATC
ATCTGTGATGATTGCTTGGGGCTCTGGAAAAAGTGGTTCAGAATGATACA
AGATGTAAAAATGTTGATCATAGTGCTTTCATCGAGGGAGAATCAGAGGA
ACTATCTCCCGCATATTACCCTTTGCCTTTCGTTTTGTTTGAGTTCAAGA
AATGAGTCAGAGCTCTAGACCATGGCAAATAGCAAAGCGCCGAG

Coding sequence (CDS) from alignment at chr23:696991..703834+

>NO23G01930.1 ID=NO23G01930.1|Name=NO23G01930.1|organism=Nannochloropsis oceanica|type=CDS|length=2385bp|location=Sequence derived from alignment at chr23:696991..703834+ (Nannochloropsis oceanica)
ATGATTTTTCTCCAGACTGGCCTGGGTGGCTGCAACGGCATCATCCTATT
TTTGCGGACGAAAAATGCACACACGTCGTCGCTTGAATCTTTTATGTCCC
ATCGCAGCAGCGGCAGACGGAGTACTACTAAAGTCCTAACATTGGCTTGT
CGCGCCCTCATTTCTCTTCTTTTCCCTCCTCCTACAGAACTACACCTTAT
TGTCTGCCTTGTGACCATGGATGTTGCTGAGGGGAAGCAGTCAAAAGACA
GCCTCCCCATTGAAGACGACCGTAACCCGATAATGATAATAAGGAGCGGC
GGCTGCAGCAGTAGTAGCTGCAGTAGCAGTAGTGGATGTAATGGTGGTCA
CACTGTCACCAACAACACCGACAGACGAGAAGGAAGCTCCGACATTCCTT
CCCCTTCTCACTGTTCTCCACCGCCGCGTCGTCTCATTGTGGATATCAGG
CAGAATTCTTACCACCACTACCAAAATAAACAAGACGAAGAGGAGGAAGA
TGAGCAAGAGGAGGGTGGAATGGAGGAAGGTAGAACATTAAGAGCAAGTT
CTAGATGTGATGGAGAAGAAGAAAGAAGGGAATCAAGACTAGGCGGATTG
TATCGATCACAAAGTGAAGGAACGCTCACTATGAGAAAAGGTCGCTCCTT
TTTCAGCATAGGGGTTGGGGCACCCTCCCCTCGCCGCAGCAGCAGCAGAG
GAGCCAACGTTGAAAGAGGGACAGCCATGCCCTCTCCTCGCTCCCGACTT
CCTCGTCTTTCCCCACGGGCGATTTCGATGCTCTCGCCGCGCAACCTGTT
GAGGAAGAAGCCGAGACCGATGGCGCTGAAGACGGAGGGCTCTGCTTTCG
ACGGAATCCCTTCCCCTCCGGCCCTGCAATCCCAACGCACGAAGCTCATC
TGCGAGAACAACAGCTACTATCGGTGGGCCGAGGAAGAAGCCCGCTACAC
AGACCCCCACCAGCTCGTCTCCCCCTGGTCCTCTCTCAACATCGCCATGC
CTCTCAGTGCCTTTTTCTTCCAGCTTACATCTACCTTCTTCTCTGTCCCC
ATAGCCTACTACGTCATCAAGAACCTGGGAATGAATGCTGCCGCTACCAA
CGTCGCGCAGCAAATGACACGACTCCCACAAGCCTTCCAAATCCCCATCG
GGCTCCTCACGGACTGTGTGCCCATTCGAAAGCGGCGTCGGAAGCACTAC
ATTCTCATCGGATGGCTCCTCCACATTGGAGCCATGACAGCCCTCGCCGT
CGTGGGCGAGCCAGACATCACCTCCCTCGTAGGACTGATCTTCCTCTCCT
TCACGGGCGGACAAATCATGGACCTGGCCCAGCGCGCCCTCATCATCCAG
CGGTCACGCCACGAGAGGGAGGACCAGAAGGGCGTGCTGATGGTCACAGT
AAACCTCGGCTGGACCTGGGGCAACATGATTGGCTATATCTTGGGGACAT
TCAGCTATGAAAGCAATTTTAACAACGGCGGGGGCATGAGCATAGGCAAT
ATTGCGACATTTAATGCCTGTATTGGGGCTGCCTTTTTGCCCTTCCTCGT
CACGCTTTACGACACCAAGGTCAATGCAATCTCTAAGACCCGCCCCATGG
GCGAGGAGATGGCGGATGTTTGGGCCATGGTGCAGCGGAAGAGTGTCTTG
ATGCCCATGCTCTTCGTGGGGATCTTCCAAGTCTTCTGGGTGCCCAACAG
CGTTTGGACCATCTTCCTCGTCGAGGGTCTGCACTTTACCGAATGGAACA
TCGGGCTGATGGGCTTGCTTGGGAGCATTTTAGGTGCCTGCGGTGCATCC
ATGTATCGGCTTTGCTTCATGCACGTCAGCTGGAGGAAAATCTTTGTATT
TACCTCCCTCATTATGGCGGGGATGAACTGCCTAACCCTTCTCTTGGTCT
TCAGGGTGAACAAGACGTGGGGCATCTCGGACTACTTCTTCGCATCGGGC
GACAACCTGGTCGAGTCCCTGGTGGACGGCTTCCATATCATGCCTATCAG
CATAATGTACATGGGTCTCTGCCCCGGCGGGGCGGAGGGGACAGCGCTCG
CCGCTATTCAGACGTTTGCCTCGTTGGCCGTAATGATGAGTAGCAATATA
GGTCTCCTTTTTCTCCGCATCTGGGACGTCGATGGCGGAACTATTGCGGC
CGGCAATTTCGAAGGCGTATGGAAAATCACCCTGCTCTGTGGCCTGTTTC
AGCTCGTGGGCGTCTTCTTCGTGAAGCTATTGCCGCGCAACGCGAAGCAC
CAAGAAATCCTGCAGTCATTCGATCGGAACATAGTGTGGGGTGGAATCTG
CTTCATCGCTTTTGTTATCCTTGCCTTCATTCTAACCATCGGTCTAAATG
TGACATATATGGTGCACGGCGACCTCGTATCCTGA

Synonyms

Publications