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Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
chr22 | genome | chr22:514..4962 + |
Analyses
This mRNA is derived from or has results from the following analyses
Homology
BLAST of NO22G00010.1 vs.
Match: XP_005855001.1 (oxidoreductase domain protein [Nannochloropsis gaditana CCMP526]; EKU21355.1 oxidoreductase domain protein [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 778.9 bits (2010), Expect = 8.500e-222 Identity = 396/445 (88.99%), Postives = 407/445 (91.46%), Query Frame = 0
Query: 1 MRLSLGFVLALATSTHAFVARAPLLNTPSR-------QVQPGASWSRLMAMKDVGVGIIGAGRIGIVHLEALASCPNAIPVIISNPTVSKAQDAATKFNVKEFTDDAMKVINHPDVDAVWICSPSQYHADQIKACAAAGKHVFCEKPIATGLAETIEAINTCREANVKLMTALQRRFDPNFARVKRAILEGEVGNVVSVKLTSRDPSPPPFEYVRGGGGIFKDMAVHDLDMSRFLMGTEPESILAQGSCHIDGRIGSLPGAEAFDTAVVIVKYPGGKTATIDVCRQAPYGYDQRAEVLGLKGMIATDNMYPNTARIFTKDSTRNADLPYDFFMSRYKDAYLQETKEFVKCLSEDGPVPCTGEDGLIALVMAIAAEKSALEGRWVDFKEIPINAIHCDPSGTHCELDEVEYAAADSKDSGRKREAVKGWIKDAVSFIKKDNTVTGA 439
MRLS F LA+A +T AFV L PSR +V A WSRLMAMKDVGVGIIGAGRIGIVHLEALA CP+AIPVIISNPTV+KAQ+AA KFN +EFTDDAMKVI HPDVDAVWICSPSQYHADQIKACAAAGKHVFCEKPIATGLAETIEAINTCREA VKLMTALQRRFDPNFARVKRAILEGEVGNVVSVKLTSRDPSPPPFEYVRGGGGIFKDMAVHDLDMSRFLMGTEPESILA GSCHID RIGSLPGAEAFDTAVVIVKYPGGKTATIDVCRQAPYGYDQRAEVLGLKGMIATDNMYPNTARIFTKDSTRNADLPYDFFMSRYKDAYLQETKEFVKCLSEDGPVPCTGEDGLIALVMAIAAEKSALEGRWVDFKEIPINAIHCDPSGTHCEL+E+E A S + GRKREAVKGWIKDAVSFIKK+ T TGA
Sbjct: 1 MRLSFSFFLAVAATTQAFVPGPVRL--PSRGASLMAPEVGRTAGWSRLMAMKDVGVGIIGAGRIGIVHLEALAGCPSAIPVIISNPTVAKAQEAAVKFNAREFTDDAMKVIQHPDVDAVWICSPSQYHADQIKACAAAGKHVFCEKPIATGLAETIEAINTCREAGVKLMTALQRRFDPNFARVKRAILEGEVGNVVSVKLTSRDPSPPPFEYVRGGGGIFKDMAVHDLDMSRFLMGTEPESILALGSCHIDERIGSLPGAEAFDTAVVIVKYPGGKTATIDVCRQAPYGYDQRAEVLGLKGMIATDNMYPNTARIFTKDSTRNADLPYDFFMSRYKDAYLQETKEFVKCLSEDGPVPCTGEDGLIALVMAIAAEKSALEGRWVDFKEIPINAIHCDPSGTHCELNEME---ASSMNGGRKREAVKGWIKDAVSFIKKE-TATGA 439
The following BLAST results are available for this feature:
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >NO22G00010.1 ID=NO22G00010.1|Name=NO22G00010.1|organism=Nannochloropsis oceanica|type=mRNA|length=1912bp AAAACCACAGGGAGCGCTTAGAGCCACTTGTTGTTGTCGGTTGCTGCTGT CCACCATGCGTCTCTCCTTGGGTTTTGTCCTAGCTCTGGCCACCAGCACT CACGCTTTCGTTGCTCGTGCCCCGCTCCTGAACACGCCTTCAAGACAAGT GCAGCCCGGGGCCTCGTGGAGCCGCCTCATGGCCATGAAGGACGTAGGAG TTGGCATCATTGGTGCGGGCCGCATTGGAATTGTGCACCTGGAGGCGCTG GCAAGCTGTCCGAACGCCATCCCCGTCATCATTTCGAACCCAACCGTATC CAAGGCCCAGGATGCGGCTACCAAGTTCAACGTCAAGGAGTTCACGGACG ACGCCATGAAGGTAATCAACCACCCTGACGTGGACGCGGTGTGGATCTGC TCCCCCTCACAGTACCACGCCGACCAGATCAAGGCCTGTGCAGCTGCCGG CAAGCACGTCTTCTGCGAGAAACCCATCGCTACGGGCCTGGCCGAGACGA TCGAGGCCATCAACACGTGTCGTGAGGCGAACGTGAAGCTCATGACGGCC TTACAGCGTCGATTCGACCCTAATTTTGCTCGGGTCAAGCGGGCGATCCT GGAGGGGGAAGTCGGTAACGTGGTGAGCGTGAAGCTGACGTCCCGAGACC CGTCCCCGCCCCCCTTCGAGTACGTTCGAGGCGGCGGGGGCATCTTCAAG GATATGGCCGTGCACGACTTGGACATGTCCCGCTTTCTCATGGGCACCGA ACCCGAGTCCATATTGGCCCAGGGCTCCTGCCACATTGACGGTCGCATCG GCAGCTTGCCGGGAGCCGAGGCGTTCGACACCGCCGTGGTGATCGTCAAG TACCCGGGAGGCAAGACCGCCACCATCGACGTCTGCCGCCAGGCGCCGTA CGGCTATGACCAGCGCGCAGAGGTGCTTGGCCTCAAGGGCATGATCGCCA CCGACAACATGTATCCCAACACCGCCCGCATCTTCACCAAGGACTCGACG CGCAACGCCGACCTGCCGTACGACTTTTTCATGTCCCGCTACAAGGATGC CTACCTCCAGGAAACAAAGGAGTTCGTCAAGTGCCTGTCGGAGGACGGCC CAGTTCCTTGCACAGGCGAAGACGGTCTCATTGCTCTGGTTATGGCCATA GCGGCCGAGAAGTCGGCGCTGGAGGGCCGGTGGGTGGACTTCAAGGAGAT TCCCATCAACGCCATCCATTGCGACCCCTCGGGCACCCACTGCGAGCTGG ACGAGGTAGAGTACGCCGCCGCGGACAGCAAGGACAGCGGGAGGAAGCGG GAGGCGGTTAAGGGCTGGATCAAAGACGCCGTGTCCTTCATCAAGAAGGA CAATACGGTCACGGGGGCCTAGACAGGCGTAGAGGGAGGGAAGGAGGAAA GGAGAGAAAGGGAGGAGTGGAAGAGGAGGAAGGGGGGAGGCCGTGGCCAT TCCCATGAAGGCCTCCAGCCGGTCGTGGCTGAAAAGATGCCACGAGCGTC CTCGAAAAGGGCCACGATAACTAATAAAGCAAAGCCATGGCGTGAAGGAC CAGCAGATGGAGGGTAAATGGGAAAGGGAGAGTAGGGAGATTGATATGGG GACGACAAGGAGGGAATGGAGGGAGATTCCTTCCTTTGGGTCTATGTGTG TAGTGTGTCTATGTTGGTGCAATCACGTCGCCCTGCGAGTGGCTGCATCT GTGTGTGTCTGTGCTTGACACTAGTGCCTGTGTACATGTCTGTCCAGATT CCTATCCTTGCTTTTCCTCATTATTTCCTCTTCCCACGAGGAGGCGAGAC TTGAGCAAGAAAAAGAGGAAAGAAACCAGGCAGGCGCACCAGCCACCGCT ATTTATTCTATTTAAAACCCAAGCAACAAGCAAAAAGGACGATAAGTCGT CAGTCCGCCATG back to topprotein sequence of NO22G00010.1 >NO22G00010.1-protein ID=NO22G00010.1-protein|Name=NO22G00010.1|organism=Nannochloropsis oceanica|type=polypeptide|length=439bp MRLSLGFVLALATSTHAFVARAPLLNTPSRQVQPGASWSRLMAMKDVGVG IIGAGRIGIVHLEALASCPNAIPVIISNPTVSKAQDAATKFNVKEFTDDA MKVINHPDVDAVWICSPSQYHADQIKACAAAGKHVFCEKPIATGLAETIE AINTCREANVKLMTALQRRFDPNFARVKRAILEGEVGNVVSVKLTSRDPS PPPFEYVRGGGGIFKDMAVHDLDMSRFLMGTEPESILAQGSCHIDGRIGS LPGAEAFDTAVVIVKYPGGKTATIDVCRQAPYGYDQRAEVLGLKGMIATD NMYPNTARIFTKDSTRNADLPYDFFMSRYKDAYLQETKEFVKCLSEDGPV PCTGEDGLIALVMAIAAEKSALEGRWVDFKEIPINAIHCDPSGTHCELDE VEYAAADSKDSGRKREAVKGWIKDAVSFIKKDNTVTGA* back to topmRNA from alignment at chr22:514..4962+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >NO22G00010.1 ID=NO22G00010.1|Name=NO22G00010.1|organism=Nannochloropsis oceanica|type=mRNA|length=4449bp|location=Sequence derived from alignment at chr22:514..4962+ (Nannochloropsis oceanica) AAAACCACAGGGAGCGCTTAGAGCCACTTGTTGTTGTCGGTTGCTGCTGT
CCACCATGCGTCTCTCCTTGGGTTTTGTCCTAGCTCTGGCCACCAGCACT
CACGCTTTCGTTGCTCGTGCCCCGCTCCTGAACACGCCTTCAAGACAAGT
GCAGCCCGGGGCCTCGTGGAGCCGCCTCATGGCCATGAAGGACGTAGGAG
TTGGCATCATTGGTGCGGGCCGCATTGGAATTGTGCACCTGGAGGCGCTG
GCAAGCTGGTAAGAGGATGTTAAGGGAAGGATATTAGGATTGATCCGAAG
AAACAGAGGCCAGAGAGGGTGGAAGGCTCTGGGTTCGATCTGTGGCATGT
CTTCGCGTATGTAATTGCATGGAGGCAGGAGCGGCCATATCAAGCCAAGT
GATTGAAATCAAGGAGCGGGGTGATAAGACTGGGCGGCTTTGGTGGAAAT
TAATGATTGCTGATCGGTGGTTCTCCTTTTCTCCCTGTCCCCCCTCTTCT
CTCCTCCCCTCCCCAGTCCGAACGCCATCCCCGTCATCATTTCGAACCCA
ACCGTATCCAAGGCCCAGGATGCGGCTACCAAGTTCAACGTCAAGGAGTT
CACGGACGACGCCATGAAGGTGAGGATGAGAGGCATAAGAGGGAAAAGGA
AGGAGAGAGGGGAAAGGCAGTGGTGTGTGCGGCACGGGCAGCGTTTCGCC
TTGTCGCCTCGATTATCTTTTTGTAGCGTCTCATATGCCCCTCCCTTGCT
CCCCTATCTTTCTCTGTCTGCCTCTGCCCCAGGTAATCAACCACCCTGAC
GTGGACGCGGTGTGGATCTGCTCCCCCTCACAGTACCACGCCGACCAGAT
CAAGGCCTGTGCAGCTGCCGGCAAGCACGTCTTCTGCGAGAAACCCATCG
CTACGGGTACGCCCACTATCTCCTCTATCCCTTCCTTTCCTTTTCCTCCC
CTCCCTCCCTCCCTCGCTCTTGACTCACCCTATCTCCGTCGTCCCTTCCC
ACTGCTCTCTTTCCCTCTCTCCCTCACTCCCTCCCTTCCTCTCTCCCTAG
GCCTGGCCGAGACGATCGAGGCCATCAACACGTGTCGTGAGGCGAACGTG
AAGCTCATGACGGCCTTACAGCGTCGATTCGACCCTAATTTTGCTCGGGT
CAAGCGGGCGATCCTGGAGGGGGAAGTCGGTGCGTCTGGAAGAAGGGGAG
GGAGGGAGGGAGGGAGGGAGGGTGGGAGGGGAGGAGGGAAGAGAGCACTG
TAGCGTGATTTGCACAGACGCTTGCTGGGACTTCTTGAGATCTTTCACTT
CTCTTTATAGGTATTGACCCCTGTTTATCCCTCTGAGCGTGCCTCCATGC
ACTAGTTGTGTGCCATATTGATGTGAAACCAACCTCCCCCTCGGGCCCTC
CCCACCCGTCCCTCGGGCTCTCTCTTTCTTGTCATTCGTCGGTCGGCTGT
TTTAAAACCCCTCTGCTTCCCCGTAACCACCTCCCTTGCTTATCAGGTAA
CGTGGTGAGCGTGAAGCTGACGTCCCGAGACCCGTCCCCGCCCCCCTTCG
AGTACGTTCGAGGCGGCGGGGGCATCTTCAAGGTAGGAGGGATGGAAGGC
TGGAGGGGAAGGACTCTCAGTCTTACGGGAGGGGCTGTTGTTGAGAAACG
GACGCCTTTCATTCTCTTGGCTTGTGTTGTCTCTTCCTGCAGCCTCACAT
TGCCACGACCGCGCCATCCACACCCATTTATTTCTGCTCTTCCCTTCCAT
TCCTCTCCGCTCTTCCCTCCATTTGTCTCCCCTCTTCCCTCTCCCCCTTC
TCTCATCGTCCGCTCCCTTGCCCCTTTTCCTCCCTCCCTCCCCTCCTCCA
GGATATGGCCGTGCACGACTTGGACATGTCCCGCTTTCTCATGGGCACCG
AACCCGAGTCCATATTGGCCCAGGGCTCCTGCCACATTGACGGTCGCATC
GGCAGCTTGCCGGGAGCCGAGGCGTTCGACACCGGTAAGGAGGGAGGCAG
GGAGGGAGGGAGGCAGGGAGGGCAGTATGGCTTTGTTGGTAGATAGGAGC
ATTTATTTCTCCGTCGATGGGAGAGGATCATCTTTGCTTTCTTACTTTTA
CCCTCCTCGCTCTCCCTCTGCTGTCGTCTCGACTTTCCTCTTCGGCGCGT
CAGATCCACTATCTGGCGCTTCTTCCCTCTCTGCCTGTCTCCCTCTCGTT
TTCCCGGTGTCCAAGCCATGGCAAGCGACCAGTATACTATGAAGTCACTG
TTCTCAACTCATATAAATTATTTTCCACTCCAACCTCCCTCCCCCCTCGC
TCTTCCCCCACCGCCTAGCCGTGGTGATCGTCAAGTACCCGGGAGGCAAG
ACCGCCACCATCGACGTCTGCCGCCAGGCGCCGTACGGCTATGACCAGCG
CGCAGAGGTAGGAGGGAGGGAGGAAGGGAGGGAGGGAGGGAGTGAGGGAG
GGAGTATGGATGTGGATGCTATATGATCATGGGAGTCATCGGACCATTCG
CCGACCTCGCCCTCTGTAACCCCTCCCTTCCCCCTCTCTTCCGCAACCCC
CGTCCCCTGTCTATCTGTCGTGGTGACTGCCGCAGGTGCTTGGCCTCAAG
GGCATGATCGCCACCGACAACATGTATCCCAACACCGCCCGCATCTTCAC
CAAGGTAGGTAGGGAGGGAGGGAGGGAGTGAGGGAGGGTGGGAGGGGGGA
GAAGAAGGTGGGACGAATAGCCTCCTCCTCGGGAAGGAGACTAAGAGAGG
ATCGAGAAGTCGGGCTTCATTGTCACACAACGATTCTCTCTGGCTTCCTT
CCTTCTTCCCTCAACCCCTACCTCCACCCCTCCTTTGACCCTTCCCTCCG
CTCCTCCCTGGCCGTTTTTCAGGACTCGACGCGCAACGCCGACCTGCCGT
ACGACTTTTTCATGTCCCGCTACAAGGATGCCTACCTCCAGGAAACAAAG
GTACGAGGGAGGGAGGGAGAGGGACGATTAGTCAAATAGATAGTTTTAAA
ATTAACTTGTTCAAGTCCTGCTCAAATTCCGACAAATCACGCCCTCCCAC
CCTCTCACCCTCCCTCCCACCCTCCCTCCCTCCCTCCCTCCCTCCCTCCC
TCACTCACTCACTCATCCCAGGAGTTCGTCAAGTGCCTGTCGGAGGACGG
CCCAGTTCCTTGCACAGGCGAAGACGGTCTCATTGCTCTGGTTATGGCCA
TAGGTAAGGGCAGGGAGGGCGGGAGGGAGGGCGGGAGGGAGGGCGGGAGG
GAGGGAGGGCGGTTGGCCTACTGGCGCACTCGTTGGGTCAAAGAGCATCT
TACTTTTTCCTCCTTACCTTTTGAGGCTCTCCATGTATCCGCACCACTCA
TCCCCCTTCCCTCCCTCATTCCCTTCCTCTCTTTCCTCCTTGCCCCTAGC
GGCCGAGAAGTCGGCGCTGGAGGGCCGGTGGGTGGACTTCAAGGAGATTC
CCATCAACGCCATCCATTGCGACCCCTCGGGCACCCACTGCGAGCTGGAC
GAGGTAGAGGTGCGTACGGAGGGAGGGAGGGAGGAAAGGGAGGTGTGGAT
TAGAGTGTTTATAGGTATATGTGTGCATGGGTCTGTGGGTGTTGTAATTC
TCTCTCTTTTGCTTTGCCCTGCCTCAATCCTCGTCCTCGGCTTGGTCCTT
GCTCCTCTCTACTTGATCATCCCCCCACCGGCTTTTTCGACTTCGGCACA
GGCCCTTGCACTCACCGCCCTCCCTCTCTCCCCTCTCTCTCCTCCTCCAC
CCTTTCCTTTCTCTCTCTCTTCTCTTTCCCTCCCTCCCTCGCCCTCAGTA
CGCCGCCGCGGACAGCAAGGACAGCGGGAGGAAGCGGGAGGCGGTTAAGG
GCTGGATCAAAGACGCCGTGTCCTTCATCAAGAAGGACAATACGGTCACG
GGGGCCTAGACAGGCGTAGAGGGAGGGAAGGAGGAAAGGAGAGAAAGGGA
GGAGTGGAAGAGGAGGAAGGGGGGAGGCCGTGGCCATTCCCATGAAGGCC
TCCAGCCGGTCGTGGCTGAAAAGATGCCACGAGCGTCCTCGAAAAGGGCC
ACGATAACTAATAAAGCAAAGCCATGGCGTGAAGGACCAGCAGATGGAGG
GTAAATGGGAAAGGGAGAGTAGGGAGATTGATATGGGGACGACAAGGAGG
GAATGGAGGGAGATTCCTTCCTTTGGGTCTATGTGTGTAGTGTGTCTATG
TTGGTGCAATCACGTCGCCCTGCGAGTGGCTGCATCTGTGTGTGTCTGTG
CTTGACACTAGTGCCTGTGTACATGTCTGTCCAGATTCCTATCCTTGCTT
TTCCTCATTATTTCCTCTTCCCACGAGGAGGCGAGACTTGAGCAAGAAAA
AGAGGAAAGAAACCAGGCAGGCGCACCAGCCACCGCTATTTATTCTATTT
AAAACCCAAGCAACAAGCAAAAAGGACGATAAGTCGTCAGTCCGCCATG back to topCoding sequence (CDS) from alignment at chr22:514..4962+ >NO22G00010.1 ID=NO22G00010.1|Name=NO22G00010.1|organism=Nannochloropsis oceanica|type=CDS|length=1317bp|location=Sequence derived from alignment at chr22:514..4962+ (Nannochloropsis oceanica) ATGCGTCTCTCCTTGGGTTTTGTCCTAGCTCTGGCCACCAGCACTCACGC TTTCGTTGCTCGTGCCCCGCTCCTGAACACGCCTTCAAGACAAGTGCAGC CCGGGGCCTCGTGGAGCCGCCTCATGGCCATGAAGGACGTAGGAGTTGGC ATCATTGGTGCGGGCCGCATTGGAATTGTGCACCTGGAGGCGCTGGCAAG CTGTCCGAACGCCATCCCCGTCATCATTTCGAACCCAACCGTATCCAAGG CCCAGGATGCGGCTACCAAGTTCAACGTCAAGGAGTTCACGGACGACGCC ATGAAGGTAATCAACCACCCTGACGTGGACGCGGTGTGGATCTGCTCCCC CTCACAGTACCACGCCGACCAGATCAAGGCCTGTGCAGCTGCCGGCAAGC ACGTCTTCTGCGAGAAACCCATCGCTACGGGCCTGGCCGAGACGATCGAG GCCATCAACACGTGTCGTGAGGCGAACGTGAAGCTCATGACGGCCTTACA GCGTCGATTCGACCCTAATTTTGCTCGGGTCAAGCGGGCGATCCTGGAGG GGGAAGTCGGTAACGTGGTGAGCGTGAAGCTGACGTCCCGAGACCCGTCC CCGCCCCCCTTCGAGTACGTTCGAGGCGGCGGGGGCATCTTCAAGGATAT GGCCGTGCACGACTTGGACATGTCCCGCTTTCTCATGGGCACCGAACCCG AGTCCATATTGGCCCAGGGCTCCTGCCACATTGACGGTCGCATCGGCAGC TTGCCGGGAGCCGAGGCGTTCGACACCGCCGTGGTGATCGTCAAGTACCC GGGAGGCAAGACCGCCACCATCGACGTCTGCCGCCAGGCGCCGTACGGCT ATGACCAGCGCGCAGAGGTGCTTGGCCTCAAGGGCATGATCGCCACCGAC AACATGTATCCCAACACCGCCCGCATCTTCACCAAGGACTCGACGCGCAA CGCCGACCTGCCGTACGACTTTTTCATGTCCCGCTACAAGGATGCCTACC TCCAGGAAACAAAGGAGTTCGTCAAGTGCCTGTCGGAGGACGGCCCAGTT CCTTGCACAGGCGAAGACGGTCTCATTGCTCTGGTTATGGCCATAGCGGC CGAGAAGTCGGCGCTGGAGGGCCGGTGGGTGGACTTCAAGGAGATTCCCA TCAACGCCATCCATTGCGACCCCTCGGGCACCCACTGCGAGCTGGACGAG GTAGAGTACGCCGCCGCGGACAGCAAGGACAGCGGGAGGAAGCGGGAGGC GGTTAAGGGCTGGATCAAAGACGCCGTGTCCTTCATCAAGAAGGACAATA CGGTCACGGGGGCCTAG back to top
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