NO14G02120.1, NO14G02120.1 (mRNA) Nannochloropsis oceanica

Overview
NameNO14G02120.1
Unique NameNO14G02120.1
TypemRNA
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2311
Alignment locationchr14:637431..639898 -

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Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr14genomechr14:637431..639898 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. oceanica IMET12017-10-24
Homology annotation for N. oceanica IMET12017-10-25
InterPro analysis for N. oceanica IMET12017-10-25
Annotated Terms
Homology
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BLAST of NO14G02120.1 vs.
Match: EWM24596.1 (beta-lactamase domain protein [Nannochloropsis gaditana])

HSP 1 Score: 575.1 bits (1481), Expect = 2.000e-160
Identity = 282/429 (65.73%), Postives = 332/429 (77.39%), Query Frame = 0 
Query:   27 VADLEDLGSVEVTNRCCGAMTCRVLAPDIFLEAKQGSGPSDAPTPDSRTPTDNFTYVGRDIKNEDELRQVRRAVKACPFHALRLRRGTKGTEVMREDVNDAYPLPVGPHGEVYLLGHYTPKNAGASGYLIVRPKGGNILIDASSPDASLVERIKNLGEVSYLVFTHKDHTAFHREWFQALPGMQRVMHVDDVVEERDHFFFPYTGEVEIKVAGKKTQSLDKEGDVLLIPIPGHTPGSLAILYRNHSLFTGDSLHFSRPRGHLVSSRLHCWSDREQQQKSLKTLEGYDWLHILPGHGDPKEFESLEEGKMSLRQGLGLMEGQPRGYTSTGRFVPWLQLRTN--YSGVLRKVPQWARKGMEWLIAPVGAQGTRERERVGVWIRNALLVCLVLKVLPRVLAWRRRLRDRRRIQARVAALCRLPWGHPGLWVE 454
            +ADLED GSVEVT++CCGAMTCRVLAP+IF EAK GS  SD  T  S TP DNFTYVGR I++E ELRQVRRAVKACPFHAL+LRRG KG  VM ED N AYP+ V   G VYLLGHY+PKNAGA+ YLIVRP GGN+L+D   P+ASLVERIK LG   YLVFTHKDHTAF +EW  A P +QRV+H  DVVE R HFFFPYTG+VEIK+AG K Q LDKEGD++LIPIPGH+PGSLAIL++ H LFTGDSL +SRPRGHLVSSRLHCWS  E+Q+ SL+ L+ Y W H+LPGHG+PK F   E+ + SL + +  M  QP G TS   FV WLQLRT+   S  +R +P+WARKG+E L+AP GA G RER R   W R+A+++ ++LKVLP VLA+  R+ +RRRIQAR AAL RLPWGHP  W+E
Sbjct:   39 IADLEDFGSVEVTDKCCGAMTCRVLAPEIFHEAKLGSSFSD--THGSSTP-DNFTYVGRKIRDETELRQVRRAVKACPFHALKLRRGGKGATVMDEDFNAAYPIQVDQSGAVYLLGHYSPKNAGATCYLIVRPNGGNVLVDCPVPNASLVERIKELGGAKYLVFTHKDHTAFTKEWKMAFPAIQRVLHAGDVVENRKHFFFPYTGDVEIKLAGGKAQPLDKEGDIVLIPIPGHSPGSLAILFQEHYLFTGDSLFYSRPRGHLVSSRLHCWSSWEEQRASLQALDSYQWAHVLPGHGEPKRFSGKEDAQASLARAIEWMGEQPGGSTSMASFVCWLQLRTHSGQSRFMRAIPRWARKGIERLVAPAGAPGARERARALKWARSAVMMWILLKVLPNVLAFLSRVGERRRIQARAAALVRLPWGHP--WLE 462
The following BLAST results are available for this feature:
BLAST of NO14G02120.1 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 1
Match NameE-valueIdentityDescription
EWM24596.12.000e-16065.73beta-lactamase domain protein [Nannochloropsis gad... [more]
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
NO14G02120NO14G02120Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
NO14G02120.1NO14G02120.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
NO14G02120.1.cds1NO14G02120.1.cds1Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO14G02120.1.cds2NO14G02120.1.cds2Nannochloropsis oceanica (N. oceanica IMET1)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>NO14G02120.1 ID=NO14G02120.1|Name=NO14G02120.1|organism=Nannochloropsis oceanica|type=mRNA|length=2311bp
AAAAAAAAAAAAAAAAAAAAAGAGAGAGGGAGAGAGAGAGAGGGAGAGGG
AGAGAGAGAGAGAGAGCATTTTTCCTTTCCATAAGAGAGGCATTTTCAAT
GCCCATGACCCCAACAACATGCAAGGCCGTACGGCCGCCCAACAACACAA
ATAAACAAAAAAATGAATAAAAACGCGCATGAAAGGACGCCACAGCACTC
AATAAATGGTTTCAGTCAAGTTTTTCCTTTATCACAGTAAACTCCGTCTG
CCAACTCCGTCTGCCATCTATTTTTTTAAAAAAAAAGTCGTTGATGGGTT
GGTCGATTCTTTCACGAGATCGATATTGACCTTGGTTAAGCCTCTTTCAT
AATAAATCGAAATAACTTTTGGGTCCTCATAATCATTCGACACCTCCCCT
AACCTCGAGCACCACTAGTAGCCTGTACTGGCAATGGTAGACAACCTGAA
GCGCTCATTCGCGTGTGTTGATTTGCCTTCACACCCTTCATCATTATAGA
GGCAGTAGCCCCGTCGACGTTCTCAAAATGCTGTACCCCGCACAAACCCA
CACAGCTTAACATCCCCATCCTTACGCCCTGTGTCGCGTCATGGACGAGG
AAGATCCGCGCCCGTCGCTGCCGCCACCGCTAAGTGTAGAATTAGAATCG
TTATCTTCCAGGCCTCCCGTGGCAGACCTCGAGGACTTGGGTTCCGTGGA
GGTTACGAACCGATGCTGCGGGGCCATGACTTGCCGAGTCTTGGCCCCCG
ATATTTTCCTGGAGGCCAAGCAAGGAAGCGGCCCATCAGACGCTCCAACG
CCTGACAGCCGCACGCCTACCGACAACTTTACATACGTTGGGCGTGACAT
CAAGAATGAGGACGAGCTGCGCCAAGTGCGACGGGCCGTCAAAGCTTGTC
CCTTCCACGCTCTGCGTTTGCGACGTGGCACAAAAGGCACGGAAGTGATG
CGAGAGGATGTAAACGACGCATATCCATTGCCTGTAGGTCCGCACGGGGA
GGTGTATCTGCTTGGACATTACACTCCTAAGAATGCGGGAGCTTCTGGCT
ACCTAATCGTTCGACCAAAAGGTGGCAACATCTTGATCGATGCTTCCTCC
CCCGACGCAAGCCTCGTGGAGCGAATCAAGAACTTGGGGGAGGTCAGCTA
TTTGGTATTTACCCACAAGGATCATACGGCGTTTCATCGCGAGTGGTTTC
AGGCCTTGCCGGGCATGCAGCGGGTCATGCATGTGGATGATGTGGTGGAG
GAGAGGGATCATTTCTTTTTTCCTTACACGGGGGAAGTGGAGATCAAAGT
TGCGGGCAAGAAAACCCAGTCACTCGACAAAGAAGGCGACGTCCTGCTTA
TCCCCATTCCAGGGCACACACCCGGTAGCCTCGCCATCCTTTACCGCAAT
CACTCTCTCTTTACGGGGGACTCCCTCCATTTTTCCCGTCCCCGTGGTCA
CCTCGTCTCCTCACGCTTGCACTGCTGGTCCGATAGGGAACAACAACAAA
AAAGCCTGAAAACCCTCGAGGGATATGACTGGCTACACATCCTGCCTGGG
CACGGGGACCCGAAAGAGTTTGAAAGTTTAGAAGAGGGGAAAATGTCGTT
GCGGCAAGGGTTGGGTTTGATGGAGGGGCAGCCAAGAGGGTACACAAGCA
CTGGGCGTTTCGTCCCGTGGTTGCAACTGAGGACGAATTATTCAGGAGTG
CTGAGAAAAGTACCGCAATGGGCGCGTAAGGGGATGGAGTGGCTGATTGC
TCCTGTGGGGGCCCAGGGGACGAGGGAAAGGGAAAGGGTGGGGGTATGGA
TACGGAACGCCTTGTTAGTGTGTTTGGTGTTGAAGGTATTGCCCCGAGTG
CTTGCGTGGCGGAGAAGATTGCGGGATCGCCGGCGGATCCAGGCACGGGT
AGCGGCTTTGTGTCGGCTGCCTTGGGGGCACCCTGGGTTATGGGTTGAAT
GCTTGGAGGGTGGGGCGAGGAAGTAGGGAGGGAGGGAGAAGGGGAGGAAG
GGAGGGAGGGAGGGATGAGAGACACTTAAACACGTATAGAGAGTGAGTGC
GTGTATGTATGTGTAATATACAGTCGTGCGAGACAGACAGAGCATGCGAG
AATATGTGAGTCTTGATTTGGCATAAGAAGAAGAGAATGAAATATGAATG
AGAGGGACGACAGTATGTATACTAGCAGCAAGTCGATAAGACACAGCACT
TAAATAGTAACAAAGACACTGACAAACAAGTACAAAGAGCAGCGAGACCA
TGCGTCATAAAATCTCGAAAGCACGAGTAAAAAAGTTATTCTTCCATCAC
GCATTTAGAAA
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protein sequence of NO14G02120.1

>NO14G02120.1-protein ID=NO14G02120.1-protein|Name=NO14G02120.1|organism=Nannochloropsis oceanica|type=polypeptide|length=462bp
MDEEDPRPSLPPPLSVELESLSSRPPVADLEDLGSVEVTNRCCGAMTCRV
LAPDIFLEAKQGSGPSDAPTPDSRTPTDNFTYVGRDIKNEDELRQVRRAV
KACPFHALRLRRGTKGTEVMREDVNDAYPLPVGPHGEVYLLGHYTPKNAG
ASGYLIVRPKGGNILIDASSPDASLVERIKNLGEVSYLVFTHKDHTAFHR
EWFQALPGMQRVMHVDDVVEERDHFFFPYTGEVEIKVAGKKTQSLDKEGD
VLLIPIPGHTPGSLAILYRNHSLFTGDSLHFSRPRGHLVSSRLHCWSDRE
QQQKSLKTLEGYDWLHILPGHGDPKEFESLEEGKMSLRQGLGLMEGQPRG
YTSTGRFVPWLQLRTNYSGVLRKVPQWARKGMEWLIAPVGAQGTRERERV
GVWIRNALLVCLVLKVLPRVLAWRRRLRDRRRIQARVAALCRLPWGHPGL
WVECLEGGARK*
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mRNA from alignment at chr14:637431..639898-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>NO14G02120.1 ID=NO14G02120.1|Name=NO14G02120.1|organism=Nannochloropsis oceanica|type=mRNA|length=2468bp|location=Sequence derived from alignment at chr14:637431..639898- (Nannochloropsis oceanica)
AAAAAAAAAAAAAAAAAAAAAGAGAGAGGGAGAGAGAGAGAGGGAGAGGG
AGAGAGAGAGAGAGAGCATTTTTCCTTTCCATAAGAGAGGCATTTTCAAT
GCCCATGACCCCAACAACATGCAAGGCCGTACGGCCGCCCAACAACACAA
ATAAACAAAAAAATGAATAAAAACGCGCATGAAAGGACGCCACAGCACTC
AATAAATGGTTTCAGTCAAGTTTTTCCTTTATCACAGTAAACTCCGTCTG
CCAACTCCGTCTGCCATCTATTTTTTTAAAAAAAAAGTCGTTGATGGGTT
GGTCGATTCTTTCACGAGATCGATATTGACCTTGGTTAAGCCTCTTTCAT
AATAAATCGAAATAACTTTTGGGTCCTCATAATCATTCGACACCTCCCCT
AACCTCGAGCACCACTAGTAGCCTGTACTGGCAATGGTAGACAACCTGAA
GCGCTCATTCGCGTGTGTTGATTTGCCTTCACACCCTTCATCATTATAGA
GGCAGTAGCCCCGTCGACGTTCTCAAAATGCTGTACCCCGCACAAACCCA
CACAGCTTAACATCCCCATCCTTACGCCCTGTGTCGCGTCATGGACGAGG
AAGATCCGCGCCCGTCGCTGCCGCCACCGCTAAGTGTAGAATTAGAATCG
TTATCTTCCAGGCCTCCCGTGGCAGACCTCGAGGACTTGGGTTCCGTGGA
GGTTACGAACCGATGCTGCGGGGCCATGACTTGCCGAGTCTTGGCCCCCG
ATATTTTCCTGGAGGCCAAGCAAGGAAGCGGCCCATCAGACGCTCCAACG
CCTGACAGCCGCACGCCTACCGACAACTTTACATACGTTGGGCGTGACAT
CAAGAATGAGGACGAGCTGCGCCAAGTGCGACGGGCCGTCAAAGCTTGTC
CCTTCCACGCTCTGCGTTTGCGACGTGGCACAAAAGGCACGGAAGTGATG
CGAGAGGATGTAAACGACGCATATCCATTGCCTGTAGGTCCGCACGGGGA
GGTGTATCTGCTTGGACATTACACTCCTAAGAATGCGGGAGCTTCTGGCT
ACCTAATCGTTCGACCAAAAGGTGGCAACATCTTGATCGATGCTTCCTCC
CCCGACGCAAGCCTCGTGGAGCGAATCAAGAACTTGGGGGAGGTCAGCTA
TTTGGTATTTACCCACAAGGATCATACGGCGTTTCATCGCGAGTGGTTTC
AGGCCTTGCCGGGCATGCAGCGGGTCATGCATGTGGATGATGTGGTGGAG
GAGAGGGATCATTTCTTTTTTCCTTACACGGGGGAAGTGGAGATCAAAGT
TGGTGCGTTTTAATGAAATGAATTCGGAGAGAAATGAAGGGAGATACTGG
AAACAAGATGCTCACAAAGCAGCGCCAGAAAAAAGTCTTTTGACCAAAAC
ACACACTCAGATTCCACCCATCACCACAACCACCACACATGCAAACACGT
ACCGAACAGCGGGCAAGAAAACCCAGTCACTCGACAAAGAAGGCGACGTC
CTGCTTATCCCCATTCCAGGGCACACACCCGGTAGCCTCGCCATCCTTTA
CCGCAATCACTCTCTCTTTACGGGGGACTCCCTCCATTTTTCCCGTCCCC
GTGGTCACCTCGTCTCCTCACGCTTGCACTGCTGGTCCGATAGGGAACAA
CAACAAAAAAGCCTGAAAACCCTCGAGGGATATGACTGGCTACACATCCT
GCCTGGGCACGGGGACCCGAAAGAGTTTGAAAGTTTAGAAGAGGGGAAAA
TGTCGTTGCGGCAAGGGTTGGGTTTGATGGAGGGGCAGCCAAGAGGGTAC
ACAAGCACTGGGCGTTTCGTCCCGTGGTTGCAACTGAGGACGAATTATTC
AGGAGTGCTGAGAAAAGTACCGCAATGGGCGCGTAAGGGGATGGAGTGGC
TGATTGCTCCTGTGGGGGCCCAGGGGACGAGGGAAAGGGAAAGGGTGGGG
GTATGGATACGGAACGCCTTGTTAGTGTGTTTGGTGTTGAAGGTATTGCC
CCGAGTGCTTGCGTGGCGGAGAAGATTGCGGGATCGCCGGCGGATCCAGG
CACGGGTAGCGGCTTTGTGTCGGCTGCCTTGGGGGCACCCTGGGTTATGG
GTTGAATGCTTGGAGGGTGGGGCGAGGAAGTAGGGAGGGAGGGAGAAGGG
GAGGAAGGGAGGGAGGGAGGGATGAGAGACACTTAAACACGTATAGAGAG
TGAGTGCGTGTATGTATGTGTAATATACAGTCGTGCGAGACAGACAGAGC
ATGCGAGAATATGTGAGTCTTGATTTGGCATAAGAAGAAGAGAATGAAAT
ATGAATGAGAGGGACGACAGTATGTATACTAGCAGCAAGTCGATAAGACA
CAGCACTTAAATAGTAACAAAGACACTGACAAACAAGTACAAAGAGCAGC
GAGACCATGCGTCATAAAATCTCGAAAGCACGAGTAAAAAAGTTATTCTT
CCATCACGCATTTAGAAA
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Coding sequence (CDS) from alignment at chr14:637431..639898-

>NO14G02120.1 ID=NO14G02120.1|Name=NO14G02120.1|organism=Nannochloropsis oceanica|type=CDS|length=1386bp|location=Sequence derived from alignment at chr14:637431..639898- (Nannochloropsis oceanica)
ATGGACGAGGAAGATCCGCGCCCGTCGCTGCCGCCACCGCTAAGTGTAGA
ATTAGAATCGTTATCTTCCAGGCCTCCCGTGGCAGACCTCGAGGACTTGG
GTTCCGTGGAGGTTACGAACCGATGCTGCGGGGCCATGACTTGCCGAGTC
TTGGCCCCCGATATTTTCCTGGAGGCCAAGCAAGGAAGCGGCCCATCAGA
CGCTCCAACGCCTGACAGCCGCACGCCTACCGACAACTTTACATACGTTG
GGCGTGACATCAAGAATGAGGACGAGCTGCGCCAAGTGCGACGGGCCGTC
AAAGCTTGTCCCTTCCACGCTCTGCGTTTGCGACGTGGCACAAAAGGCAC
GGAAGTGATGCGAGAGGATGTAAACGACGCATATCCATTGCCTGTAGGTC
CGCACGGGGAGGTGTATCTGCTTGGACATTACACTCCTAAGAATGCGGGA
GCTTCTGGCTACCTAATCGTTCGACCAAAAGGTGGCAACATCTTGATCGA
TGCTTCCTCCCCCGACGCAAGCCTCGTGGAGCGAATCAAGAACTTGGGGG
AGGTCAGCTATTTGGTATTTACCCACAAGGATCATACGGCGTTTCATCGC
GAGTGGTTTCAGGCCTTGCCGGGCATGCAGCGGGTCATGCATGTGGATGA
TGTGGTGGAGGAGAGGGATCATTTCTTTTTTCCTTACACGGGGGAAGTGG
AGATCAAAGTTGCGGGCAAGAAAACCCAGTCACTCGACAAAGAAGGCGAC
GTCCTGCTTATCCCCATTCCAGGGCACACACCCGGTAGCCTCGCCATCCT
TTACCGCAATCACTCTCTCTTTACGGGGGACTCCCTCCATTTTTCCCGTC
CCCGTGGTCACCTCGTCTCCTCACGCTTGCACTGCTGGTCCGATAGGGAA
CAACAACAAAAAAGCCTGAAAACCCTCGAGGGATATGACTGGCTACACAT
CCTGCCTGGGCACGGGGACCCGAAAGAGTTTGAAAGTTTAGAAGAGGGGA
AAATGTCGTTGCGGCAAGGGTTGGGTTTGATGGAGGGGCAGCCAAGAGGG
TACACAAGCACTGGGCGTTTCGTCCCGTGGTTGCAACTGAGGACGAATTA
TTCAGGAGTGCTGAGAAAAGTACCGCAATGGGCGCGTAAGGGGATGGAGT
GGCTGATTGCTCCTGTGGGGGCCCAGGGGACGAGGGAAAGGGAAAGGGTG
GGGGTATGGATACGGAACGCCTTGTTAGTGTGTTTGGTGTTGAAGGTATT
GCCCCGAGTGCTTGCGTGGCGGAGAAGATTGCGGGATCGCCGGCGGATCC
AGGCACGGGTAGCGGCTTTGTGTCGGCTGCCTTGGGGGCACCCTGGGTTA
TGGGTTGAATGCTTGGAGGGTGGGGCGAGGAAGTAG
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Synonyms
Publications