NO14G00970.1, NO14G00970.1 (mRNA) Nannochloropsis oceanica

Overview
NameNO14G00970.1
Unique NameNO14G00970.1
TypemRNA
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length984
Alignment locationchr14:327725..329688 +

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Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr14genomechr14:327725..329688 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. oceanica IMET12017-10-24
Homology annotation for N. oceanica IMET12017-10-25
InterPro analysis for N. oceanica IMET12017-10-25
Annotated Terms
Homology
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BLAST of NO14G00970.1 vs.
Match: EWM24738.1 (beta- aspartyl asparaginyl family [Nannochloropsis gaditana])

HSP 1 Score: 573.9 bits (1478), Expect = 3.100e-160
Identity = 275/318 (86.48%), Postives = 296/318 (93.08%), Query Frame = 0 
Query:    9 VLSLLPLAQAFLPPTLPSTSTLRTTWAPAPLSMSSLLLDENAVADRIKDGLLIRHMPEDVYRVLKSWDRMVENVPFEDKETQRFATSYIDGLEAKPWHDVSKFPWLQKLEENAAVVQQELKEALQMGEMLEKTGNNVWIGALTSEGAAYGPDWKTLVLQDRAWDDTNCRIFPKTVQLLRDIGAPTVEVFFAKQKGKTGIQPHSDGCNFVLTAHLGLDVPEGECWIKVGGEKKEWKNGKALAFDTHYFHETGNESEKDRYVLLMRFWHPGVSPKEREALQYVFDALDGPQAQTDMDFEYLSGLADAQLASRRVEELEED 327
            +L L   A AFLPP  PST T R + +   L MSSLL+DENAVADRIKDGLLIR+MPED++RVL SW+RMVEN PFEDKE QRFATSYI+GLEAKPWHDVSKFPWLQKLEENA VVQQELKEAL MGEMLEKTGNNVW+GALTSEGAAYGPDWKTLVLQDRAWD+TN RIFPKTVQLLR+IGAPTVEVFFAKQKGKTGIQPHSDGCNFVLTAHLG+DVPEGECWIKVGG+K+EW+NGKALAFDTHYFHETGN S+KDRYVLLMRFWHPGV+PKEREALQYVFDALDGPQAQTDMDFEYL+GLA+AQLASRRVEE+EED
Sbjct:    6 ILMLAATASAFLPPLPPSTPTFRPSTS---LGMSSLLMDENAVADRIKDGLLIRYMPEDIHRVLASWNRMVENQPFEDKEAQRFATSYIEGLEAKPWHDVSKFPWLQKLEENAGVVQQELKEALAMGEMLEKTGNNVWVGALTSEGAAYGPDWKTLVLQDRAWDETNARIFPKTVQLLREIGAPTVEVFFAKQKGKTGIQPHSDGCNFVLTAHLGVDVPEGECWIKVGGQKEEWRNGKALAFDTHYFHETGNASDKDRYVLLMRFWHPGVTPKEREALQYVFDALDGPQAQTDMDFEYLNGLAEAQLASRRVEEVEED 320
The following BLAST results are available for this feature:
BLAST of NO14G00970.1 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 1
Match NameE-valueIdentityDescription
EWM24738.13.100e-16086.48beta- aspartyl asparaginyl family [Nannochloropsis... [more]
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
NO14G00970NO14G00970Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
NO14G00970.1NO14G00970.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
NO14G00970.1.cds1NO14G00970.1.cds1Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO14G00970.1.cds2NO14G00970.1.cds2Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO14G00970.1.cds3NO14G00970.1.cds3Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO14G00970.1.cds4NO14G00970.1.cds4Nannochloropsis oceanica (N. oceanica IMET1)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>NO14G00970.1 ID=NO14G00970.1|Name=NO14G00970.1|organism=Nannochloropsis oceanica|type=mRNA|length=984bp
ATGAAGCTCTCGCCCTCCTCCCTCGTCCTCTCCCTCCTCCCCCTGGCCCA
GGCCTTCCTCCCCCCCACCCTCCCCTCGACCTCTACGCTGCGGACGACTT
GGGCCCCCGCGCCGTTGTCCATGTCCTCCCTGCTTTTGGATGAAAATGCC
GTGGCCGACCGGATCAAGGACGGTCTCCTCATACGTCACATGCCCGAGGA
CGTGTACCGCGTGCTCAAATCCTGGGACCGGATGGTGGAAAATGTGCCCT
TCGAGGACAAGGAGACGCAGCGATTCGCCACCTCTTATATCGACGGCCTC
GAGGCCAAGCCCTGGCACGATGTCTCCAAGTTCCCGTGGCTGCAGAAACT
GGAGGAGAACGCCGCAGTAGTCCAGCAGGAGCTGAAAGAGGCCCTTCAGA
TGGGCGAGATGTTAGAAAAAACGGGCAATAACGTCTGGATCGGTGCACTG
ACGAGTGAAGGGGCTGCCTATGGCCCCGACTGGAAGACACTTGTGCTGCA
GGACCGTGCCTGGGACGACACCAACTGCCGCATTTTCCCAAAGACTGTAC
AACTGCTGCGTGACATTGGAGCGCCCACCGTGGAGGTTTTCTTCGCCAAG
CAAAAGGGAAAGACGGGCATCCAACCGCACTCGGATGGGTGTAATTTTGT
CTTGACGGCGCATTTGGGTTTGGACGTGCCCGAGGGAGAATGCTGGATCA
AGGTAGGGGGTGAGAAAAAGGAGTGGAAAAACGGCAAGGCCCTGGCATTT
GACACGCACTATTTCCACGAGACGGGGAACGAGAGCGAGAAAGATCGGTA
CGTTCTTCTTATGCGGTTCTGGCACCCGGGTGTCAGCCCCAAGGAGAGGG
AGGCGTTGCAGTATGTGTTTGATGCTTTGGATGGCCCGCAGGCACAGACG
GACATGGACTTCGAGTACTTGAGTGGCTTGGCGGATGCCCAGTTGGCGAG
TCGAAGGGTGGAGGAGCTGGAGGAGGATGAGTAG
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protein sequence of NO14G00970.1

>NO14G00970.1-protein ID=NO14G00970.1-protein|Name=NO14G00970.1|organism=Nannochloropsis oceanica|type=polypeptide|length=328bp
MKLSPSSLVLSLLPLAQAFLPPTLPSTSTLRTTWAPAPLSMSSLLLDENA
VADRIKDGLLIRHMPEDVYRVLKSWDRMVENVPFEDKETQRFATSYIDGL
EAKPWHDVSKFPWLQKLEENAAVVQQELKEALQMGEMLEKTGNNVWIGAL
TSEGAAYGPDWKTLVLQDRAWDDTNCRIFPKTVQLLRDIGAPTVEVFFAK
QKGKTGIQPHSDGCNFVLTAHLGLDVPEGECWIKVGGEKKEWKNGKALAF
DTHYFHETGNESEKDRYVLLMRFWHPGVSPKEREALQYVFDALDGPQAQT
DMDFEYLSGLADAQLASRRVEELEEDE*
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mRNA from alignment at chr14:327725..329688+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>NO14G00970.1 ID=NO14G00970.1|Name=NO14G00970.1|organism=Nannochloropsis oceanica|type=mRNA|length=1964bp|location=Sequence derived from alignment at chr14:327725..329688+ (Nannochloropsis oceanica)
ATGAAGCTCTCGCCCTCCTCCCTCGTCCTCTCCCTCCTCCCCCTGGCCCA
GGCCTTCCTCCCCCCCACCCTCCCCTCGACCTCTACGCTGCGGACGACTT
GGGCCCCCGCGCCGTTGTCCATGTCCTCCCTGCTTTTGGATGAAAATGCC
GTGGCCGACCGGATCAAGGACGGTCTCCTCATACGTCACATGCCCGAGGT
ACGGAGGGAGGGGAAAAGAAGGGAGGAAAGAAAGAGAGGAGGTCGCTGCT
CCCGGAGCAAGGCGTGCATCTTTGTCATGACAGCGAAGGGTAATTGCACC
GGAATGAGGCATAAGAGAAAATGATATTTCTGCAACTGTTGCCGCTCTCT
CGTACTCATAATATGTACGGATATCCACCTTTTCCTGATTGTCTTACCCT
TCTCCGCTTTCGAGATGTGTACGCATATCATGAGAGCATGCTTTGCGTCG
CATCTCCCCCCGACATATCTTTAATTATCTCATTACCCCCGTAGAATAAA
TGAAATTCTTCAGTCGTTGGTAAGCCATCTTGCTGTCATGCAGCGCAGCG
CGAGTGTAAAAAATCACCCCCACCTCGGTCCGTCTGCTCCTTTTCGAATG
TACAGCTACACATCAGAGAAACAGAAACTCTGCATCTCTCCCACTATATA
CCTGATAAGCGCACGGCTTTATAACCATGCCGTGTGGTCAACTGCTCGGT
GGGGACATTTAAACTATGTATTTTCGTAATAAGTAGTGATAAGTCTCATT
AAAATCCTACCTATGTAATCAATCAAATAACTAATTTACTAATTCGACCC
ATCAATTTGTTTTCTAATCCGCAATTCATCACCCGTCGATTAACGTAAGC
ATACATTCATCTATCCCCTTCCCCACATATCGATGCAGGACGTGTACCGC
GTGCTCAAATCCTGGGACCGGATGGTGGAAAATGTGCCCTTCGAGGACAA
GGAGACGCAGCGATTCGCCACCTCTTATATCGACGGCCTCGAGGCCAAGC
CCTGGCACGATGTCTCCAAGTGAGTGATTATATGACCCGTGGCCGTCTTT
TCCCCTCCCTCTTCTCTCCACTTTTCTGGCTTGCTTGTCCTTTCCCTGCT
CCTTTTAACACTCTTCCCTTCCGTTTCCTTTTCCTTGCACACGCGCTTCT
CTCTAGGTTCCCGTGGCTGCAGAAACTGGAGGAGAACGCCGCAGTAGTCC
AGCAGGAGCTGAAAGAGGCCCTTCAGATGGGCGAGATGTTAGAAAAAACG
GGCAATAACGTCTGGATCGGTGCACTGACGAGTGAAGGGGCTGCCTATGG
CCCCGACTGGAAGACACTTGTGCTGCAGGTAGGTCCTCTCCCTCCTTCCC
TTCTACCATCCCATCCTCTCTCTTTCACGTCCTGCATGCTCGAAAGCATG
CCTGTTTCTCTGTTGACTGGACGGAGACGGAGAACAGAGAGCACTCACCC
TTGATCCCTCCTTCCTTCCCTCCCTCCTTAGGACCGTGCCTGGGACGACA
CCAACTGCCGCATTTTCCCAAAGACTGTACAACTGCTGCGTGACATTGGA
GCGCCCACCGTGGAGGTTTTCTTCGCCAAGCAAAAGGGAAAGACGGGCAT
CCAACCGCACTCGGATGGGTGTAATTTTGTCTTGACGGCGCATTTGGGTT
TGGACGTGCCCGAGGGAGAATGCTGGATCAAGGTAGGGGGTGAGAAAAAG
GAGTGGAAAAACGGCAAGGCCCTGGCATTTGACACGCACTATTTCCACGA
GACGGGGAACGAGAGCGAGAAAGATCGGTACGTTCTTCTTATGCGGTTCT
GGCACCCGGGTGTCAGCCCCAAGGAGAGGGAGGCGTTGCAGTATGTGTTT
GATGCTTTGGATGGCCCGCAGGCACAGACGGACATGGACTTCGAGTACTT
GAGTGGCTTGGCGGATGCCCAGTTGGCGAGTCGAAGGGTGGAGGAGCTGG
AGGAGGATGAGTAG
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Coding sequence (CDS) from alignment at chr14:327725..329688+

>NO14G00970.1 ID=NO14G00970.1|Name=NO14G00970.1|organism=Nannochloropsis oceanica|type=CDS|length=984bp|location=Sequence derived from alignment at chr14:327725..329688+ (Nannochloropsis oceanica)
ATGAAGCTCTCGCCCTCCTCCCTCGTCCTCTCCCTCCTCCCCCTGGCCCA
GGCCTTCCTCCCCCCCACCCTCCCCTCGACCTCTACGCTGCGGACGACTT
GGGCCCCCGCGCCGTTGTCCATGTCCTCCCTGCTTTTGGATGAAAATGCC
GTGGCCGACCGGATCAAGGACGGTCTCCTCATACGTCACATGCCCGAGGA
CGTGTACCGCGTGCTCAAATCCTGGGACCGGATGGTGGAAAATGTGCCCT
TCGAGGACAAGGAGACGCAGCGATTCGCCACCTCTTATATCGACGGCCTC
GAGGCCAAGCCCTGGCACGATGTCTCCAAGTTCCCGTGGCTGCAGAAACT
GGAGGAGAACGCCGCAGTAGTCCAGCAGGAGCTGAAAGAGGCCCTTCAGA
TGGGCGAGATGTTAGAAAAAACGGGCAATAACGTCTGGATCGGTGCACTG
ACGAGTGAAGGGGCTGCCTATGGCCCCGACTGGAAGACACTTGTGCTGCA
GGACCGTGCCTGGGACGACACCAACTGCCGCATTTTCCCAAAGACTGTAC
AACTGCTGCGTGACATTGGAGCGCCCACCGTGGAGGTTTTCTTCGCCAAG
CAAAAGGGAAAGACGGGCATCCAACCGCACTCGGATGGGTGTAATTTTGT
CTTGACGGCGCATTTGGGTTTGGACGTGCCCGAGGGAGAATGCTGGATCA
AGGTAGGGGGTGAGAAAAAGGAGTGGAAAAACGGCAAGGCCCTGGCATTT
GACACGCACTATTTCCACGAGACGGGGAACGAGAGCGAGAAAGATCGGTA
CGTTCTTCTTATGCGGTTCTGGCACCCGGGTGTCAGCCCCAAGGAGAGGG
AGGCGTTGCAGTATGTGTTTGATGCTTTGGATGGCCCGCAGGCACAGACG
GACATGGACTTCGAGTACTTGAGTGGCTTGGCGGATGCCCAGTTGGCGAG
TCGAAGGGTGGAGGAGCTGGAGGAGGATGAGTAG
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Synonyms
Publications