NO14G00510.2, NO14G00510.2 (mRNA) Nannochloropsis oceanica

Overview
NameNO14G00510.2
Unique NameNO14G00510.2
TypemRNA
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length3820
Alignment locationchr14:198795..206714 +

Link to JBrowse

Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr14genomechr14:198795..206714 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. oceanica IMET12017-10-24
Homology annotation for N. oceanica IMET12017-10-25
InterPro analysis for N. oceanica IMET12017-10-25
Annotated Terms
Homology
BLAST of NO14G00510.2 vs.
Match: XP_019850287.1 (PREDICTED: uncharacterized protein LOC109581014 [Amphimedon queenslandica])

HSP 1 Score: 408.7 bits (1049), Expect = 5.900e-110
Identity = 231/606 (38.12%), Postives = 327/606 (53.96%), Query Frame = 0
Query:  397 ESLSTQVLLFLGQTPAESLSLFTGPVVAPRRSLIPPKYQFGCWNQFANEFND-TSFEEALVRFQALDIPSSVAIDPVHFFPLGSEKGNEKEIRRRNARVRAAGLMPVAYFNSMLDQRYTPEYQECERDNFFLHRPNGSLYTFAYKGAGPDAFYASLLDFSHPNTTAWFQAKMQEGLDLGFSGWMYDYGEYVSPHTLTYSRLSGAAAHNLYPLQYQRAAFDFFMSKQPPTSDPRFAPPFLYYVRSGYTGSQAWMWAHWTGDPYAGWDEDSGLAAQVKAQLTLGLSGIPFSGSDIGGFVW--EEPPSEELWLRWTAVGVASGMMHTQTGGTSLFKLPKTHVHDSEEGSRVYRKFAKLRTALFPYLYTAALEAHTTGLPLLRHHLLSFPGDSKAWSNPTVADSQYLLGPSLLLAPVLLPNQSIQ-VVYLPLDCHKTLPPSLPPSPSSSNEWMDVSSGLRYEEDDGRFRIAGRQRLWKGGQSVSVAAPIDTLPVFVRAGTIVPTLDPSVWCMSEEEEEEGKKEEGGREGGKRRRRRYGTMRHVLHLWAWLDEGLSSTSGPQWDGGAYTIHPYPASSLSSSIASSLLCTFSPPSASDAPFSNTFILQLALP 999
            E+    ++ FL +TP E+ S  +       RSLIPP ++F  WNQ  +E +  TS +     F   DIP S  ++ VHFFP G EKG E E++ +N ++ + G+   AYFN M+   Y   Y +     +FL   NG +Y + Y+GA   +F+ S +DF++P   +W+QA++   ++L F GWMYDYGEY    ++      G   HN     YQ+AAFD+ +       D  +AP +++YVRS YT +Q + WA WTGDP + W   SGL AQ+ A L +GLSG+PFSGSDIGGF W  +  P EELW RWTA G  SG+MH Q GG  L   PKTH+ D   G+  +RKFAKLR  LFPY+YT A  AH TGLP++RHH+L F  D  A +     + Q++ G S L APV+   ++    VYL         PS   S      W+DVSS  +Y+EDDGR+RI G  + + GG    +  P+D +P+F  AG+I+P  DP +  ++                       Y +++H+ +LW + D+  ++T G  WD   Y +    A  L   ++ S             P   T ILQ+A P
Sbjct:  253 ETDQLNLIFFLTETPPEAFSKISK---INGRSLIPPLWEFSPWNQIHDENSSVTSVQRIEDFFFKFDIPCSHDVNTVHFFPDGGEKGREDELKAQNDKLISLGVKSTAYFNPMVKTTYAELYDDAAAKGYFLKNQNGDIYNYTYEGAM--SFFVSQVDFTNPEAVSWYQAQLARAVNLSFHGWMYDYGEYTPYDSVASDGTKGLEMHNKVSHLYQKAAFDYLLRLDQTPGDS-YAPDYVFYVRSAYTAAQRYTWAQWTGDPSSDWSYASGLPAQITASLNIGLSGMPFSGSDIGGFEWYVDLAPDEELWSRWTAAGCVSGLMHEQGGGKGLG--PKTHIFDFPNGTSTWRKFAKLRMQLFPYIYTQAHIAHETGLPIMRHHILHFWNDVGAMNQ----EHQFMFGESFLAAPVIEQGRTTNWPVYL---------PSYRSSSIEGPTWVDVSSNFQYDEDDGRYRI-GSGKYYDGGYDAFIDVPLDRVPLFALAGSIIPIADPRIMTLNNATNSS--------------VITYESLKHLRYLWVFADKEFNAT-GHCWDTNLYQLIHSKADELEWFVSGS-------------PPGYTHILQIAGP 808          
The following BLAST results are available for this feature:
BLAST of NO14G00510.2 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 1
Match NameE-valueIdentityDescription
XP_019850287.15.900e-11038.12PREDICTED: uncharacterized protein LOC109581014 [A... [more]
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
NO14G00510NO14G00510Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
NO14G00510.2NO14G00510.2-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
NO14G00510.2.cds1NO14G00510.2.cds1Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO14G00510.2.cds2NO14G00510.2.cds2Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO14G00510.2.cds3NO14G00510.2.cds3Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO14G00510.2.cds4NO14G00510.2.cds4Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO14G00510.2.cds5NO14G00510.2.cds5Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO14G00510.2.cds6NO14G00510.2.cds6Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO14G00510.2.cds7NO14G00510.2.cds7Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO14G00510.2.cds8NO14G00510.2.cds8Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO14G00510.2.cds9NO14G00510.2.cds9Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO14G00510.2.cds10NO14G00510.2.cds10Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO14G00510.2.cds11NO14G00510.2.cds11Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO14G00510.2.cds12NO14G00510.2.cds12Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO14G00510.2.cds13NO14G00510.2.cds13Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO14G00510.2.cds14NO14G00510.2.cds14Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO14G00510.2.cds15NO14G00510.2.cds15Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO14G00510.2.cds16NO14G00510.2.cds16Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO14G00510.2.cds17NO14G00510.2.cds17Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO14G00510.2.cds18NO14G00510.2.cds18Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO14G00510.2.cds19NO14G00510.2.cds19Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO14G00510.2.cds20NO14G00510.2.cds20Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO14G00510.2.cds21NO14G00510.2.cds21Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO14G00510.2.cds22NO14G00510.2.cds22Nannochloropsis oceanica (N. oceanica IMET1)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>NO14G00510.2 ID=NO14G00510.2|Name=NO14G00510.2|organism=Nannochloropsis oceanica|type=mRNA|length=3820bp
CGACGCAGAAGTATGTCGTCGAAATGACCCGTGCCCCCTTGCTTGCCCCG
GGAACTGAGCCTCTGATTGGTACTCGACGTTGGTCCTTCATGCGGATTGA
TAGTTGAATGTCCTGGTGCATAAGTGCTGCTGCATCCTTTTTGTTGCGTC
CCTGCGAAAGTGCAATGAACCGCTCACCATCTTTTGAAATCGTTTTCACC
ACACACACTCATAGACTCATAGACACATAGACACCTACATATATTTAGGC
TGGCGTTTTTCCCAGGGCAAAATGGCTCTGACTGGCAGCTGCAGCCATAA
TACTAGGAGCACCAGTTGCGGCACATGCGGTGGAAGAAGAAGAAGTAGAT
GTCAACGTAGAGGGGCGGCGGGAGAACTTTGGTCTTACGTCGCCTTGCTC
CCTCTCTTCTTGTCTATCAACTTCTCTTTTCTTACAACACCATCCGCAAT
GGCTGCTGAGGTCGAACGAGGGGACACAAGAACGTACACAGAGCAAAACG
CCGGCGAAGGCATGCAGGCCTTTACCCTCGCTCCCTCTCTCACTGTTCGC
GTGGGCATGGACCCTTTTTTCCTTCAGATTGAGAAGACGCATCGTCCCTC
CTCCCCTCCTTTGGTGCTTCAGACCGTGCTTTCGCGACGGGGCCGGCTAG
GGTACGGCGTGTGGGTGGGTGCTGATGTGACCGATGCGATCTACGAAGGG
TACTCATGGCGCGTGGGGACAGTGGTGAAGTGGTGGCATGCGACACATGT
CTTAAGTGCTCGTCTCATTGACCATGGCATGAGCGAGGAGGGGAGCAGCA
CCCTTCCCTTCCCCCTGCCCTCTCTCTCCCTCACCCTCGCCACTTCCGAT
CCACTGCGGGGGGAGATAGACGTATCACTCTTCCTCCCTCCCGATGCCAG
TGAGGCTTCTGTGCTGGCCATAAATATGACTGCGCGAGGAGGCAGCAGCA
CGCTCGTGGCAAACCGGCTAGGCATGGCCTGGGCGATTGAGGAAGCGATG
GAGGGCGGGGTAGAGGAAGGGCTCTTTGGCTTCGGGGAGCGGTTCGCCGG
CACCACCAACAAACGAGGACACGAGCTATACTGCTGGGCGGAGGATGGAT
CGTGGGTGCTGGGGAAGGAAGTGCGTCTCCCGAAGGAGAGATCGACCTAC
GTGCCCATTCCCTTCCTCCTCTCCTCCCGGGGCTACGGCCTCCTCCTCAA
TACAACTTACCGCTCCGACTGGCGCTTGGACAGTAAGGAGCAACGGAGAG
AGTACCAGAGGAAGGAGGGGGAAAGTGAGGGGGGGGTGTCGGCGGCGATG
GAGGAGGGAAGAGGGGAGGGAGGGGTGGTAAGGGAAGAGAGGATGAGGAG
GATAAGAAGTGTCTTGTCTCCCCCAAATGGAATAGAGGAGGACGAGGAGG
AGGAAGAGGAGGAGGAGGAGGAGGAGGAGGAGGGCAGGCCTGCTTTCGAC
TTCCTGGTGGAGAGCCTTTCCACTCAAGTCCTCCTCTTCTTGGGCCAGAC
ACCGGCGGAGTCTCTTTCCCTCTTCACCGGTCCCGTTGTCGCCCCCCGCC
GCTCCCTGATCCCCCCCAAATATCAGTTCGGGTGCTGGAATCAATTCGCG
AATGAATTTAATGATACCTCCTTTGAGGAGGCCCTCGTCAGGTTCCAGGC
GCTGGACATACCCAGCTCTGTGGCCATTGACCCGGTCCATTTTTTCCCCC
TGGGCAGCGAGAAGGGTAATGAGAAGGAGATCAGGAGGCGGAATGCGCGG
GTCCGGGCAGCAGGCCTGATGCCTGTGGCTTACTTTAACTCCATGTTGGA
CCAACGCTATACACCGGAATACCAGGAGTGCGAGCGTGACAACTTTTTCC
TCCACCGGCCCAACGGCTCCCTCTACACATTCGCCTACAAGGGCGCAGGC
CCGGATGCCTTCTACGCCTCCCTCCTCGATTTCTCCCACCCCAACACCAC
GGCATGGTTCCAAGCCAAGATGCAGGAGGGGCTGGACCTCGGCTTCAGCG
GGTGGATGTACGATTATGGAGAGTACGTGTCACCACACACGCTCACGTAC
TCCCGCCTCTCGGGGGCAGCGGCCCATAATCTCTACCCTCTCCAGTACCA
GCGGGCGGCCTTCGATTTCTTTATGAGCAAGCAGCCTCCTACCTCCGACC
CTCGTTTCGCGCCTCCATTTTTGTATTACGTCCGAAGCGGATACACGGGC
TCCCAAGCCTGGATGTGGGCGCATTGGACAGGTGATCCGTACGCAGGGTG
GGATGAGGACAGTGGGTTGGCCGCCCAGGTCAAGGCCCAGCTGACACTAG
GCTTGAGCGGGATTCCATTCTCCGGGTCGGATATTGGGGGCTTCGTGTGG
GAAGAGCCGCCCTCTGAAGAGCTGTGGCTGCGGTGGACAGCGGTGGGCGT
GGCCTCGGGCATGATGCATACACAGACAGGCGGCACCTCGCTGTTTAAGC
TTCCGAAGACACACGTCCATGACTCGGAGGAAGGCTCCAGGGTGTACAGG
AAGTTTGCCAAGCTCCGTACGGCCCTCTTTCCCTACCTCTACACGGCAGC
TCTGGAGGCCCACACCACAGGCTTGCCCCTGTTACGACACCACCTCCTCT
CCTTCCCGGGTGATAGCAAGGCCTGGTCCAACCCTACCGTCGCCGACTCC
CAGTACCTCCTCGGTCCCTCCCTCCTCCTCGCTCCCGTCCTCCTCCCCAA
TCAAAGCATCCAAGTCGTCTACCTCCCCCTCGACTGCCACAAAACCCTCC
CTCCCTCCCTCCCTCCCTCACCCTCCTCCTCCAACGAATGGATGGACGTG
TCGAGCGGGCTGAGGTACGAGGAGGACGACGGTCGTTTCCGGATTGCGGG
GAGACAGCGCTTGTGGAAGGGGGGACAGTCCGTTTCTGTGGCGGCTCCTA
TCGATACGTTGCCTGTCTTTGTCCGGGCAGGGACGATAGTACCCACGCTG
GACCCATCGGTGTGGTGCATGAGCGAGGAGGAGGAGGAGGAAGGGAAAAA
GGAAGAGGGAGGGAGGGAGGGAGGGAAGAGGAGGAGGAGGAGGTACGGGA
CGATGCGGCATGTGCTTCATTTGTGGGCGTGGCTCGATGAGGGATTGAGC
TCCACATCTGGCCCGCAATGGGATGGGGGCGCCTACACCATTCATCCCTA
TCCCGCGTCTTCCCTCTCGTCCTCCATCGCGTCCTCCCTCCTCTGCACTT
TTTCTCCGCCCTCTGCATCGGATGCGCCGTTCTCGAACACATTTATCTTA
CAGCTGGCATTGCCGTTACGGATGCCTTTGGGGAAGAGGGAGGGAGGGAG
GGAGGGAGGATGGAGTGTAAGAGGGGTGAAACGGCTGTCTTCTGACGTGG
GTGGGAAAGAGGGAGGGCATGTGGTGGACATCAGGCAGGCGGACGGAGGG
GATGGAGGGGGATGGAGGCACGTTGTTCATGTTGATGAGGACGGATGGGA
TAGTGGCCGGAAGGAGGGAGGGGAGGATTTGTGGGCAATGGACGAGGAGG
AGCAGGGGGTATTTTGGCTGCGAGTGACGTCGTCGGGAATGAAAAGAGGG
ACGGAGGGAGGGAGTGACGGAGGGAGGGAAGTAGTGCGGGTGCTTCTTAC
CTTAGAGTAGGAAGAGAAAGGATGGGGAGTGGAAGGAAGGGTTCTGGCTT
TATGCCCTTGTCCCCTTGACTATGTGCATGTTTTGAAAACAACTTTGATA
ATGATTCAAAAGCATCCATGTAAACAAAAAGAAGGCAGTCAAGTATTATA
CGCATGTTATGATGGCATGATTATAAGCAAGGCAAGCACATAAATAAAAA
ATAATAATAAAAATAATTTG
back to top

protein sequence of NO14G00510.2

>NO14G00510.2-protein ID=NO14G00510.2-protein|Name=NO14G00510.2|organism=Nannochloropsis oceanica|type=polypeptide|length=1113bp
MALTGSCSHNTRSTSCGTCGGRRRSRCQRRGAAGELWSYVALLPLFLSIN
FSFLTTPSAMAAEVERGDTRTYTEQNAGEGMQAFTLAPSLTVRVGMDPFF
LQIEKTHRPSSPPLVLQTVLSRRGRLGYGVWVGADVTDAIYEGYSWRVGT
VVKWWHATHVLSARLIDHGMSEEGSSTLPFPLPSLSLTLATSDPLRGEID
VSLFLPPDASEASVLAINMTARGGSSTLVANRLGMAWAIEEAMEGGVEEG
LFGFGERFAGTTNKRGHELYCWAEDGSWVLGKEVRLPKERSTYVPIPFLL
SSRGYGLLLNTTYRSDWRLDSKEQRREYQRKEGESEGGVSAAMEEGRGEG
GVVREERMRRIRSVLSPPNGIEEDEEEEEEEEEEEEEGRPAFDFLVESLS
TQVLLFLGQTPAESLSLFTGPVVAPRRSLIPPKYQFGCWNQFANEFNDTS
FEEALVRFQALDIPSSVAIDPVHFFPLGSEKGNEKEIRRRNARVRAAGLM
PVAYFNSMLDQRYTPEYQECERDNFFLHRPNGSLYTFAYKGAGPDAFYAS
LLDFSHPNTTAWFQAKMQEGLDLGFSGWMYDYGEYVSPHTLTYSRLSGAA
AHNLYPLQYQRAAFDFFMSKQPPTSDPRFAPPFLYYVRSGYTGSQAWMWA
HWTGDPYAGWDEDSGLAAQVKAQLTLGLSGIPFSGSDIGGFVWEEPPSEE
LWLRWTAVGVASGMMHTQTGGTSLFKLPKTHVHDSEEGSRVYRKFAKLRT
ALFPYLYTAALEAHTTGLPLLRHHLLSFPGDSKAWSNPTVADSQYLLGPS
LLLAPVLLPNQSIQVVYLPLDCHKTLPPSLPPSPSSSNEWMDVSSGLRYE
EDDGRFRIAGRQRLWKGGQSVSVAAPIDTLPVFVRAGTIVPTLDPSVWCM
SEEEEEEGKKEEGGREGGKRRRRRYGTMRHVLHLWAWLDEGLSSTSGPQW
DGGAYTIHPYPASSLSSSIASSLLCTFSPPSASDAPFSNTFILQLALPLR
MPLGKREGGREGGWSVRGVKRLSSDVGGKEGGHVVDIRQADGGDGGGWRH
VVHVDEDGWDSGRKEGGEDLWAMDEEEQGVFWLRVTSSGMKRGTEGGSDG
GREVVRVLLTLE*
back to top

mRNA from alignment at chr14:198795..206714+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>NO14G00510.2 ID=NO14G00510.2|Name=NO14G00510.2|organism=Nannochloropsis oceanica|type=mRNA|length=7920bp|location=Sequence derived from alignment at chr14:198795..206714+ (Nannochloropsis oceanica)
CGACGCAGAAGTATGTCGTCGAAATGACCCGTGCCCCCTTGCTTGCCCCG GGAACTGAGCCTCTGATTGGTACTCGACGTTGGTCCTTCATGCGGATTGA TAGTTGAATGTCCTGGTGCATAAGTGCTGCTGCATCCTTTTTGTTGCGTC CCTGCGAAAGTGCAATGAACCGCTCACCATCTTTTGAAATCGTTTTCACC ACACACACTCATAGACTCATAGACACATAGACACCTACATATATTTAGGC TGGCGTTTTTCCCAGGGCAAAATGGCTCTGACTGGCAGCTGCAGCCATAA TACTAGGAGCACCAGTTGCGGCACATGCGGTGGAAGAAGAAGAAGTAGAT GTCAACGTAGAGGGGCGGCGGGAGAACTTTGGTCTTACGTCGCCTTGCTC CCTCTCTTCTTGTCTATCAACTTCTCTTTTCTTACAACACCATCCGCAAT GGCTGCTGAGGTCGAACGAGGGGTAAGTTCAGGTCAGGCATACAGCCCTT TTGATTCTCTCCCCATGTCCTTCAATCCTCCCCCTTCGCGCTACTGCTGA TGCCCTCTTAATGCGGCCCTCTCTACTTATCCAGGACACAAGAACGTACA CAGAGCAAAACGCCGGCGAAGGCATGCAGGCCTTTACCCTCGCTCCCTCT CTCACTGTTCGCGTGGGCATGGACCCTTTTTTCCTTCAGATTGAGAAGAC GCATCGTCCCTCCTCCCCTCCTTTGGTGCTTCAGACCGTGCTTTCGCGAC GGTAGGTTAATCCACAGGCAATGCTCCGTCAACGATTGAATAACTACGAT CGATCTAACATTTATTTTAAATTCGCGCGGGCATTTCGTCTTTATTGAGG TTTAGAAGGCAGAATCCTTGAGTACTTTATTATTCACACGCGCTGTCAAA TACCTGCCCAGGTGCAGATATGGATGATGGGGATGATGATGATGATGATG AGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGATGAAGGCGATATGTTC ATCGATCCGTGCATTCAATGCGTGTATTTTAACTCTTATCGAAAGCGAGC CGTCACTTCATCCCGTTCCTCATCCCGCCTCGCGTCGCCTATTTTAATCT TCTTTTATCTATTCTTTTTCTTGTCTTTTGGGAGCGCCCTGCGCCTCGAC ACCCACACTGCCTTCCCATTATATCACAATCCCCAGGGGCCGGCTAGGGT ACGGCGTGTGGGTGGGTGCTGATGTGACCGATGCGATCTACGAAGGTGAG GAAAACAGAGGGAAGGAGGGAGGTGGGGAAGGTAGGAAAGAAAGAAGGAA GCATAAAAAGGAGATTCGTTCTTTGTTTTACCGGGAAATTGATTGGGACG AGGACGTACACACACAGGGTACTCATGGCGCGTGGGGACAGTGGTGAAGT GGTGGCATGCGACACATGTAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGG GAGGGAGGGTCAAGGCTTGGCTATATATGGACCGGCTTCTAATACCCGCC TCGTCCTTCTCCCATCATTGCCCTCCTTCCCACCCTCCTTCTTACTCTCC CTTCCTCTCTCCCTACCTGCAGGTCTTAAGTGCTCGTCTCATTGACCATG GCATGAGCGAGGAGGGGAGCAGCACCCTTCCCTTCCCCCTGCCCTCTCTC TCCCTCACCCTCGCCACTTCCGATCCACTGCGGGGGGAGATAGACGTATC ACTCTTCCTCCCTCCCGATGCCAGTGAGGCTTCTGTGCTGGCCATAAATA TGACTGCGCGAGGAGGTGACGGAGGGAGGGAGGGAAGGACGTGCTAGGGT ATTGTTTACTTTCTTGTCTCCCTGTGCTTCCCTTTTGATACTGGCGCAAA TATGAAAATATACTGCACGTGTGTGTCTATGTATAGTGTACGATATATGT CAACAGCCGAGTGGATTCCTCCTGCCTCCCTTTTTCCCTCTCCACTTGAT GCATGACTTCATTTCCTCGTTCTTCCTTTACCGACCTGTACATTATGTTG ATGAAATTATAAGAATTATTACTATTATTATTATATATACGTATACATAC ATGTCTTCCACCTCCTTCTCCCACCTCCTTCCTCACACAGGCAGCAGCAC GCTCGTGGCAAACCGGCTAGGCATGGCCTGGGCGATTGAGGAAGCGATGG AGGGCGGGGTAGAGGAAGGGCTCTTTGGCTTCGGGGAGCGGTGAGGAGGG GGGGAGGGAGGAAGGGAGGGAGGGAGGGGCGGACATCTATCCATTGGCCC ATGTATCCACTCCTTCCCCCCTCCCCCCCTCCCTCCCTCCCTCCTCAGGT TCGCCGGCACCACCAACAAACGAGGACACGAGCTATACTGCTGGGCGGAG GATGGATCGTGGGTGCTGGGGAAGGAAGTGCGTCTCCCGAAGGAGAGATC GACCTGTAAGGAGGGAGTGAGGGGGGGAGGGAGGGGGGAGAGGGGGGAGA CTTTGTCTTCTCTGGCCATCCCCACCATTTTGAAAACCCCCCTCCCTCCC TCCCTCCCTCCCTCCAGACGTGCCCATTCCCTTCCTCCTCTCCTCCCGGG GCTACGGCCTCCTCCTCAATACAACTTACCGCTCCGACTGGCGCTTGGAC AGTAAGGAGCAACGGAGAGAGTACCAGAGGAAGGAGGGGGAAAGTGAGGG GGGGGTGTCGGCGGCGATGGAGGAGGGAAGAGGGGAGGGAGGGGTGGTAA GGGAAGAGAGGATGAGGAGGATAAGAAGTGTCTTGTCTCCCCCAAATGGA ATAGAGGAGGACGAGGAGGAGGAAGAGGAGGAGGAGGAGGAGGAGGAGGA GGGCAGGCCTGCTTTCGACTTCCTGGTACGTCCGGACGCCACCCTCTCTC CTCTCCCCCTCCCCCCTCTCTCCTTCCCTCCCTCCCTCATTTCTTCCTTC CCGCCTGTGGCATTTATGCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCTT CCCTCGGCACCCAGGTGGAGAGCCTTTCCACTCAAGTCCTCCTCTTCTTG GGCCAGACACCGGCGGAGTCTCTTTCCCTCTTCACCGGTCCCGTTGTCGG TAGGTGCCAAAGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGCCCCG CTGTTGCTTGGTGTCGAGGGAAGGAGGGAAGGAGGGAAGGAGGGAAGGAA GACGAGAGGGGAGGATCGATAAAAAAATACGGGGGGAAACGGACTTTTTG ACGTGTTGCACCTCACCTTGTCCTCCCTCCCTCCCTCCCTCCCTCCCTAG CCCCCCGCCGCTCCCTGATCCCCCCCAAATATCAGTTCGGGTGCTGGAAT CAATTCGCGAATGAATTTAATGATACCTCCTTTGAGGAGGCCCTCGTCAG GTTCCAGGCGCTGGACATACCCAGGTAATTCATTGATTTATTGATATATT TAGTTTTTTATTTATTGAAAGTATGATTTATCGATTAATTAATTGTTTTA TTGATTCATTCGTTCATTCATTCCATTTATTTTATTACTTACTGATGGAA GTGGGGAGGGGGTGAAGGAGTGCATTTAAGTGCTCTGCCTCCTCTTCATT TCTTTCGCTCACATTTTTTTGCTACACCCTTCCTCTTGCCCCTCCCTCCC TCCCCCCTTCCCTCCCTCCCCCCTCCCTCCCTCCAGCTCTGTGGCCATTG ACCCGGTCCATTTTTTCCCCCTGGGCAGCGAGAAGGGTAATGAGAAGGAG ATCAGGAGGCGGAATGCGCGGGTAGGGAGGGAGGGAGGGAGGGAGGGAGG GAGGGAGGGAGAGAGGAAGAGAGGGAGGGAGGAGAGGGGGGAGGGAGGGA GGGAGGGAGGCCGAGCTTGATTGATCCCTCCTGGGGAAGGGGAAGTTGAG GGAGATGGCATGGTGAAATTAATGCGCGAAGAGAGAGGGGAGGAGGTAGG GAGGGAAAAAAGGAGGGAAAGAGAGGCCGTGCCGCCCGCCCGAGAGGTGA AGGTATTCATGTTTACGTAGAGGTATCCATATTACCCCCTTCCCCCTCCC TCCTTCCCTCAGGTCCGGGCAGCAGGCCTGATGCCTGTGGCTTACTTTAA CTCCATGTTGGACCAACGCTATACACCGGAATACCAGGAGGTAGGGAGGG AGGCAGGGAGGGAGGGAGGGAGGAAAACATGGAGCTTCAAAGCACCCGAG CAATCACTTTTCCTCCCCCTCCCGTCCTCTTCCTCCCTCCCTCCCTCCCT CCCTCCCTCCCTCCAGTGCGAGCGTGACAACTTTTTCCTCCACCGGCCCA ACGGCTCCCTCTACACATTCGCCTACAAGGGCGCAGGCCCGGATGCCTTC TACGCCTCCCTCCTCGATTTCTCCCACCCCAACACCACGGCATGGTTCCA AGCCAAGATGCAGGAGGGGCTGGACCTCGGTGGGTGCCCTCCCTCCCTCC CTCCCTCCCTCCCTCCCTCCCTCCCTCCATGGCCGGCGCCAGCGGGTGGA TGTACGACTAGGGAGACACACTTTCCCTCCCTCCCTCCCTCCCTTTCCCT CCCTCCCTCCCTCCCTCCCTCCCTCCCAGGCTTCAGCGGGTGGATGTACG ATTATGGAGAGTACGTGTCACCACACACGCTCACGTACTCCCGCCTCTCG GGGGCAGCGGCCCATAATCTCTACCCTCTCCAGTACCAGCGGGCGGCCTT CGATTTCTTTATGGTGAGGCAGGAGGGGGGTGGGGGAGGAGGGAGGGAGG GAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGA GGGAGGGAGGGAGGGAGGGAGGTGTTTGAAAGCAAGCAAGCTGCCACTGC CGACCTTCCTACGTAAACCACACCCTCCCTCCCTCCCTCCCTCCCTCCCT CCCTCCCTCCCTCCCTCCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTC CTCCCTCCCCCCCCCAGAGCAAGCAGCCTCCTACCTCCGACCCTCGTTTC GCGCCTCCATTTTTGTATTACGTCCGAAGCGGATACACGGGCTCCCAAGC CTGGATGTGGGCGCATTGGACAGGTACGGGGGGAGGGAGGGAAGGAGGGA GGGAGGGAGGGAGGGAAGGAAGGAGGGAGGGAGGGAGGGAGGGAAGGAGG GAGGGAGGGAGGGAAGGAGGGAGGGAGGGAGGGAGGGAGGGAAGATACGT CTCTCTACTGTCCCTACAGGGGAGGGTACACAAGCTTGCATAAGAGAGGG AGGGAGGGAGGGACGGAGGGAGGGAGGGAGGGAGGGAAGACAAGAAGGAA GGACGGTAATTGATCGTTCTGACGAGTTCTCTTTCCCTCCCTCCCTCCCT GCCCTTACAGGTGATCCGTACGCAGGGTGGGATGAGGACAGTGGGTTGGC CGCCCAGGTCAAGGCCCAGCTGACACTAGTAAGGAGGGAGGGAGGGAGGG AGGGAGAGAGGGGGCGAAGGAGGCATTCGATATGAATTTCTCACCTCCCC CCCTCCCTCTCTCCCACCCTTCCCTCCTAGGGCTTGAGCGGGATTCCATT CTCCGGGTCGGATATTGGGGGCTTCGTGTGGGAAGAGCCGCCCTCTGAAG AGCTGTGGCTGCGGTGGACAGCGGTAAGGGAGGGAGGGAGGGAGGGAGGG AGGGAGGGAGGGTGGAAGGGAGGGAAAAGGCTTGTCGCTAAACGGCTGCT GCGGCTCATGCATGAGTACATGATTTTTCCTTAAATTCTCCGTCTCCTTC CCTCCCTCCCTCCCTCAGGTGGGCGTGGCCTCGGGCATGATGCATACACA GACAGGCGGCACCTCGCTGTTTAAGCTTCCGAAGACACACGTCCATGACT CGGAGGAAGGCTCCAGGGTGTACAGGAAGGTGAGGGAGGGAGGGAGGGAG GGAGGGAGGGAGGGAGGGAGGAAGAGGAAAGAGAGGAATGGAGGGAAGAG GAAGTTGAGTTCAAGGCGCCCTGTACTTAAGTTCCCTTTCCTCCCTCCTT CCCTCCCTCCCTCCCTCCCTCCCTCCTTCCCTCCCTCCCTCCCTCCTTCT CTCCCTCTCAGTTTGCCAAGCTCCGTACGGCCCTCTTTCCCTACCTCTAC ACGGCAGCTCTGGAGGCCCACACCACAGGCTTGCCCCTGTTACGACACCA CCTCCTCTCCTTCCCGGGTGATAGCAAGGTAGGGAGGGAGGGAGGGAGGG AGGGAGGGAGGGAGGGAGGGACAAGAGCTCTCAAGCAGCATTTTGTGGCT GTGCCATCATTGTTATTCTTTGTTACCCCCCGCGTTTCGTGGTGTTTTTC TGCACCCCTCCCTCCTCCTCACTCACTCTGTCCTCCCTCCCTCCCTCCCT CCCTTCAGGCCTGGTCCAACCCTACCGTCGCCGACTCCCAGTACCTCCTC GGTCCCTCCCTCCTCCTCGCTCCCGTCCTCCTCCCCAATCAAAGCATCCA AGTCGTCTACCTCCCCCTCGACTGCCACAAAACCCTCCCTCCCTCCCTCC CTCCCTCACCCTCCTCCTCCAACGAATGGATGGACGTGTCGAGCGGGCTG AGGTACGAGGAGGACGACGGTCGTTTCCGGATTGCGGGGAGACAGCGCTT GTGGAAGGGGGGACAGGTAAGGGAGGGAGGGGGGGAGGAAGGGTGGGAGG GAGGGAGGGCTAGACCTCGATGTGTCCGTTTTGTGTGCAGCTTCACTGTT GAATCAATTTTCCTCGCCTCTTAAGGTACTACACATGGAGCTATTCCCTC CTTCCCTCCCTCCCGCCCTGCCTCACTCCCTCACTCACCCCCTTCTTCCC ACCGACCGTCCCTCCCTCCCTTCCTCCCTCCCTCCCTCCCCTCCTCAAGT CCGTTTCTGTGGCGGCTCCTATCGATACGTTGCCTGTCTTTGTCCGGGCA GGGACGATAGTACCCACGCTGGACCCATCGGTGTGGTGCATGAGCGAGGA GGAGGAGGAGGAAGGGAAAAAGGAAGAGGGAGGGAGGGAGGGAGGGAAGA GGAGGAGGAGGAGGTACGGGACGATGCGGCATGTGCTTCATTTGTGGGCG TGGCTCGATGAGGGATTGAGGTGAGGAAGGGAGGGAGGGAGGGAGGAAGA GAGTGAGGGTGTGGGATGCCCTTTGCATGTACTGACACGCACATGAAGAG GAAGTATGGAAGGAGGGAGGGAGGGAGGGAGGGAGGGGATTGCTCACTCG GACAAGCTGACGGCCTCTACAACATAAACAAAACGCACGACATTAACAGC TCCACATCTGGCCCGCAATGGGATGGGGGCGCCTACACCATTCATCCCTA TCCCGCGTCTTCCCTCTCGTCCTCCATCGCGTCCTCCCTCCTCTGCACTT TTTCTCCGCCCTCTGCATCGGATGCGCCGTTCTCGAACACATTTATCTTA CAGCTGGCATTGCCGTTACGGATGCCTTTGGGGAAGAGGGAGGGAGGGAG GGAGGGAGGATGGAGTGTAAGAGGGGTGAAACGGCTGTCTTCTGACGTGG GTGGGAAAGAGGGAGGGCATGTGGTGGACATCAGGCAGGCGGACGGAGGG GATGGAGGGGGATGGAGGCACGTTGTTCATGTTGATGAGGACGGATGGGA TAGTGGCCGGAAGGAGGGAGGGGAGGATTTGTGGGCAATGGACGAGGAGG AGCAGGGGGTATTTTGGCTGCGAGTGACGTCGTCGGGAATGAAAAGAGGG ACGGAGGGAGGGAGTGACGGAGGGAGGGAAGTAGTGCGGGTGCTTCTTAC CTTAGAGTAGGAAGAGAAAGGATGGGGAGTGGAAGGAAGGGTTCTGGCTT TATGCCCTTGTCCCCTTGACTATGTGCATGTTTTGAAAACAACTTTGATA ATGATTCAAAAGCATCCATGTAAACAAAAAGAAGGCAGTCAAGTATTATA CGCATGTTATGATGGCATGATTATAAGCAAGGCAAGCACATAAATAAAAA ATAATAATAAAAATAATTTG
back to top

Coding sequence (CDS) from alignment at chr14:198795..206714+

>NO14G00510.2 ID=NO14G00510.2|Name=NO14G00510.2|organism=Nannochloropsis oceanica|type=CDS|length=3339bp|location=Sequence derived from alignment at chr14:198795..206714+ (Nannochloropsis oceanica)
ATGGCTCTGACTGGCAGCTGCAGCCATAATACTAGGAGCACCAGTTGCGG
CACATGCGGTGGAAGAAGAAGAAGTAGATGTCAACGTAGAGGGGCGGCGG
GAGAACTTTGGTCTTACGTCGCCTTGCTCCCTCTCTTCTTGTCTATCAAC
TTCTCTTTTCTTACAACACCATCCGCAATGGCTGCTGAGGTCGAACGAGG
GGACACAAGAACGTACACAGAGCAAAACGCCGGCGAAGGCATGCAGGCCT
TTACCCTCGCTCCCTCTCTCACTGTTCGCGTGGGCATGGACCCTTTTTTC
CTTCAGATTGAGAAGACGCATCGTCCCTCCTCCCCTCCTTTGGTGCTTCA
GACCGTGCTTTCGCGACGGGGCCGGCTAGGGTACGGCGTGTGGGTGGGTG
CTGATGTGACCGATGCGATCTACGAAGGGTACTCATGGCGCGTGGGGACA
GTGGTGAAGTGGTGGCATGCGACACATGTCTTAAGTGCTCGTCTCATTGA
CCATGGCATGAGCGAGGAGGGGAGCAGCACCCTTCCCTTCCCCCTGCCCT
CTCTCTCCCTCACCCTCGCCACTTCCGATCCACTGCGGGGGGAGATAGAC
GTATCACTCTTCCTCCCTCCCGATGCCAGTGAGGCTTCTGTGCTGGCCAT
AAATATGACTGCGCGAGGAGGCAGCAGCACGCTCGTGGCAAACCGGCTAG
GCATGGCCTGGGCGATTGAGGAAGCGATGGAGGGCGGGGTAGAGGAAGGG
CTCTTTGGCTTCGGGGAGCGGTTCGCCGGCACCACCAACAAACGAGGACA
CGAGCTATACTGCTGGGCGGAGGATGGATCGTGGGTGCTGGGGAAGGAAG
TGCGTCTCCCGAAGGAGAGATCGACCTACGTGCCCATTCCCTTCCTCCTC
TCCTCCCGGGGCTACGGCCTCCTCCTCAATACAACTTACCGCTCCGACTG
GCGCTTGGACAGTAAGGAGCAACGGAGAGAGTACCAGAGGAAGGAGGGGG
AAAGTGAGGGGGGGGTGTCGGCGGCGATGGAGGAGGGAAGAGGGGAGGGA
GGGGTGGTAAGGGAAGAGAGGATGAGGAGGATAAGAAGTGTCTTGTCTCC
CCCAAATGGAATAGAGGAGGACGAGGAGGAGGAAGAGGAGGAGGAGGAGG
AGGAGGAGGAGGGCAGGCCTGCTTTCGACTTCCTGGTGGAGAGCCTTTCC
ACTCAAGTCCTCCTCTTCTTGGGCCAGACACCGGCGGAGTCTCTTTCCCT
CTTCACCGGTCCCGTTGTCGCCCCCCGCCGCTCCCTGATCCCCCCCAAAT
ATCAGTTCGGGTGCTGGAATCAATTCGCGAATGAATTTAATGATACCTCC
TTTGAGGAGGCCCTCGTCAGGTTCCAGGCGCTGGACATACCCAGCTCTGT
GGCCATTGACCCGGTCCATTTTTTCCCCCTGGGCAGCGAGAAGGGTAATG
AGAAGGAGATCAGGAGGCGGAATGCGCGGGTCCGGGCAGCAGGCCTGATG
CCTGTGGCTTACTTTAACTCCATGTTGGACCAACGCTATACACCGGAATA
CCAGGAGTGCGAGCGTGACAACTTTTTCCTCCACCGGCCCAACGGCTCCC
TCTACACATTCGCCTACAAGGGCGCAGGCCCGGATGCCTTCTACGCCTCC
CTCCTCGATTTCTCCCACCCCAACACCACGGCATGGTTCCAAGCCAAGAT
GCAGGAGGGGCTGGACCTCGGCTTCAGCGGGTGGATGTACGATTATGGAG
AGTACGTGTCACCACACACGCTCACGTACTCCCGCCTCTCGGGGGCAGCG
GCCCATAATCTCTACCCTCTCCAGTACCAGCGGGCGGCCTTCGATTTCTT
TATGAGCAAGCAGCCTCCTACCTCCGACCCTCGTTTCGCGCCTCCATTTT
TGTATTACGTCCGAAGCGGATACACGGGCTCCCAAGCCTGGATGTGGGCG
CATTGGACAGGTGATCCGTACGCAGGGTGGGATGAGGACAGTGGGTTGGC
CGCCCAGGTCAAGGCCCAGCTGACACTAGGCTTGAGCGGGATTCCATTCT
CCGGGTCGGATATTGGGGGCTTCGTGTGGGAAGAGCCGCCCTCTGAAGAG
CTGTGGCTGCGGTGGACAGCGGTGGGCGTGGCCTCGGGCATGATGCATAC
ACAGACAGGCGGCACCTCGCTGTTTAAGCTTCCGAAGACACACGTCCATG
ACTCGGAGGAAGGCTCCAGGGTGTACAGGAAGTTTGCCAAGCTCCGTACG
GCCCTCTTTCCCTACCTCTACACGGCAGCTCTGGAGGCCCACACCACAGG
CTTGCCCCTGTTACGACACCACCTCCTCTCCTTCCCGGGTGATAGCAAGG
CCTGGTCCAACCCTACCGTCGCCGACTCCCAGTACCTCCTCGGTCCCTCC
CTCCTCCTCGCTCCCGTCCTCCTCCCCAATCAAAGCATCCAAGTCGTCTA
CCTCCCCCTCGACTGCCACAAAACCCTCCCTCCCTCCCTCCCTCCCTCAC
CCTCCTCCTCCAACGAATGGATGGACGTGTCGAGCGGGCTGAGGTACGAG
GAGGACGACGGTCGTTTCCGGATTGCGGGGAGACAGCGCTTGTGGAAGGG
GGGACAGTCCGTTTCTGTGGCGGCTCCTATCGATACGTTGCCTGTCTTTG
TCCGGGCAGGGACGATAGTACCCACGCTGGACCCATCGGTGTGGTGCATG
AGCGAGGAGGAGGAGGAGGAAGGGAAAAAGGAAGAGGGAGGGAGGGAGGG
AGGGAAGAGGAGGAGGAGGAGGTACGGGACGATGCGGCATGTGCTTCATT
TGTGGGCGTGGCTCGATGAGGGATTGAGCTCCACATCTGGCCCGCAATGG
GATGGGGGCGCCTACACCATTCATCCCTATCCCGCGTCTTCCCTCTCGTC
CTCCATCGCGTCCTCCCTCCTCTGCACTTTTTCTCCGCCCTCTGCATCGG
ATGCGCCGTTCTCGAACACATTTATCTTACAGCTGGCATTGCCGTTACGG
ATGCCTTTGGGGAAGAGGGAGGGAGGGAGGGAGGGAGGATGGAGTGTAAG
AGGGGTGAAACGGCTGTCTTCTGACGTGGGTGGGAAAGAGGGAGGGCATG
TGGTGGACATCAGGCAGGCGGACGGAGGGGATGGAGGGGGATGGAGGCAC
GTTGTTCATGTTGATGAGGACGGATGGGATAGTGGCCGGAAGGAGGGAGG
GGAGGATTTGTGGGCAATGGACGAGGAGGAGCAGGGGGTATTTTGGCTGC
GAGTGACGTCGTCGGGAATGAAAAGAGGGACGGAGGGAGGGAGTGACGGA
GGGAGGGAAGTAGTGCGGGTGCTTCTTACCTTAGAGTAG
back to top
Synonyms
Publications