NO13G01780.3, NO13G01780.3 (mRNA) Nannochloropsis oceanica | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	NO13G01780.3
Unique Name	NO13G01780.3
Type	mRNA
Organism	Nannochloropsis oceanica (N. oceanica IMET1)
Sequence length	3431
Alignment location	chr13:521299..525576 -

Link to JBrowse

Properties

Mutants

Expression

No biomaterial libraries express this feature.

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
chr13	genome	chr13:521299..525576 -

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Gene prediction for N. oceanica IMET1	2017-10-24
Homology annotation for N. oceanica IMET1	2017-10-25
InterPro analysis for N. oceanica IMET1	2017-10-25

Annotated Terms

Homology

[Close]

BLAST of NO13G01780.3 vs.
Match: EWM21854.1 (mismatch repair protein 5 [Nannochloropsis gaditana])

HSP 1 Score: 975.7 bits (2521), Expect = 8.700e-281
Identity = 533/808 (65.97%), Postives = 629/808 (77.85%), Query Frame = 0

Query:   17 GAGAG---GLDPRRNYDRLSCVIDFLEEPLLVKALGALLIHLQGRVFSLEMAGRVPVGRLRRFDLAGFVRLDNNALMSLQIFHEEKHPNVINGRGKAKEGFSLFSLLDQTRSRPGRKVLKEWMLRPLRCVEKIEERQMMVELLLQGEAMEVVNNAGRLLGRVGDVGRVLLRVKRAGATVNDWLTLANTAQHVLLLQNCLIVLGHVAIRQERVVEGGKEEGG-------------AARVVRGVLERISGEAVRRVQEVVTCVVDLEITKESKVVAVRTGCDAELDRLRAEYDNLEEFLSGEARDVLAEQASRLLSTVSVQFLPQVGFLVIVQASEKVAVETDPRFRFVFAEGESVYYKTPRMDVLDDSIGDLAAAIHDREATLLRAVGEEVLKEEVPLTEAVRACAEVDVLLSFAQVAGGLAWVKPMITEDKVVVVKDGRHPLQELAVEVFIPNDVFLVGKGGESSDRQQQEGRGKSEKEKANEEGEEGEQQQQERRQKRRPEGGRGLAVVTGPNFSGKSVYIKTVGVLTYLAHLGCFLPCQQALIGLVDGIYTRIASAETVTVQQSTFTIDCSQMNAVFRNATPSSLILVDEFGKGSAETDGLALLVACLSRLHILGARTLVTTHFLELFQRKGLLSPHLAYEISYRMDVFVPPPAPSSNP-----PSTSSS--GSSSIQTVVPLFKLTKGVATSSDGFSCAVLAGLASPLVKRAEHVARCLVEGTLSIHPLPRPLSWRKEGGGEKEEEKEAEEAGKGEEEEGGKGGREVLRYNKEAQEVLRAFMAVEDWTECGEKETQQFVELLQKV 802
            G+G G   GLDPRRNYDRLSCVIDF+ E LLVKALGALL+HLQ   F LE+ GRV V  L RFDL  FV LD+NAL SLQIFHEEKHPNVI+GRGKAKEGFSLF+LLDQT S PGRK LKEWMLRPLR V  I ERQ MVELLL  EAMEVV NAG LLG+VGD+ R+L R++RAG+TVNDWLTLANTA+H+LLLQ+CL VL H+  R     + G    G             A  +++G L+RIS +AV RV E +T V+DLEIT+ESK +AVR GCD ELDRLR +YD LEEFLS EAR VLAEQ+S+LLS +SVQFLPQVGFLVIVQA+E++AVE DPRFRFVFAEG+++YYKTPRMDVLDDSIGDL+AAI DRE  LLR + EE+LKEE  L EAVRACAE+DVL++FAQ+AGGLAWV+PM+TE++VVVVKDGRHPLQEL VE FIPNDVFL+G  G +  R                +G + +  Q++  +     G RG+AVVTGPNFSGKSVYIK VGVL YLAHLGCFLPC+QALIG+VD I TRIASAETVTVQQS+FTIDCSQMNAVF+NA+PSSL+LVDEFGKGSAETDGLALLVACLSRL  LGAR LVTTHFLELFQRKGLLSP LA +ISYRMD+FVPP  P ++P     P+T++S   +++I T+VPLFKLTKGVA+SSDGFSCA LAGLA  L+KRAE +A+  VEG++ I PL RP+++R  GG E E+E++ +             GREVLR+N +AQE L  F+ VEDW    +++ Q F+ELL++V
Sbjct:  160 GSGQGRDEGLDPRRNYDRLSCVIDFMSENLLVKALGALLVHLQCTTFQLEIGGRVTVQTLERFDLGSFVHLDSNALTSLQIFHEEKHPNVISGRGKAKEGFSLFALLDQTHSLPGRKCLKEWMLRPLRSVRGIRERQNMVELLLHPEAMEVVTNAGMLLGKVGDIQRILTRMRRAGSTVNDWLTLANTAEHILLLQSCLAVLAHLTARLSSASDKGPTTAGEEEHRTNEGSYSSAMAMLQGFLDRISRQAVGRVSEALTKVLDLEITRESKSMAVRLGCDEELDRLRGDYDGLEEFLSEEARGVLAEQSSQLLSKISVQFLPQVGFLVIVQANERIAVENDPRFRFVFAEGDALYYKTPRMDVLDDSIGDLSAAIQDREGLLLRQLAEEILKEETALAEAVRACAELDVLMAFAQLAGGLAWVRPMVTEERVVVVKDGRHPLQELTVETFIPNDVFLMGGDGNAVHR----------------DGGDEKHAQKQGLEHCNQHGTRGVAVVTGPNFSGKSVYIKMVGVLVYLAHLGCFLPCRQALIGVVDSIRTRIASAETVTVQQSSFTIDCSQMNAVFQNASPSSLVLVDEFGKGSAETDGLALLVACLSRLQRLGARALVTTHFLELFQRKGLLSPQLANDISYRMDIFVPPLPPPTSPSVSSSPATAASTPSAANIHTIVPLFKLTKGVASSSDGFSCAALAGLAPSLIKRAEQIAKYHVEGSMKIEPLARPIAFR--GGSENEKEEKNQ-------------GREVLRFNLQAQEALELFLGVEDWLLKKDQDLQGFIELLEQV 936

The following BLAST results are available for this feature:

BLAST of NO13G01780.3 vs.

BLAST of NO13G01780.3 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 1


Match Name	E-value	Identity	Description
EWM21854.1	8.700e-281	65.97	mismatch repair protein 5 [Nannochloropsis gaditan...	[more]

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
NO13G01780	NO13G01780	Nannochloropsis oceanica (N. oceanica IMET1)	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
NO13G01780.3	NO13G01780.3-protein	Nannochloropsis oceanica (N. oceanica IMET1)	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
NO13G01780.3.cds1	NO13G01780.3.cds1	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO13G01780.3.cds2	NO13G01780.3.cds2	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO13G01780.3.cds3	NO13G01780.3.cds3	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO13G01780.3.cds4	NO13G01780.3.cds4	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO13G01780.3.cds5	NO13G01780.3.cds5	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO13G01780.3.cds6	NO13G01780.3.cds6	Nannochloropsis oceanica (N. oceanica IMET1)	CDS

Sequences

The following sequences are available for this feature:

mRNA sequence
protein sequence
mRNA from alignment at chr13:521299..525576-
coding sequence from alignment at chr13:521299..525576-

mRNA sequence

>NO13G01780.3 ID=NO13G01780.3|Name=NO13G01780.3|organism=Nannochloropsis oceanica|type=mRNA|length=3431bp
CTCGAGACTGTAGTGGTGGAGGATAAGGACGTGTGGTGTTAAGTTGATGC
CTTGATGGGCTCTGAAAACCTCCTGTCTCAAGCGAAGAGCACAAGAAGTG
CACTCTTTATTAATGCAAATCTCATCCACTGCCCTGCTTTGCGACATCAT
TTCACACAGCAACACTACCCTGCTTGTGTGCCCAGGCCTCATCAAGCGGC
TCTCGTCAACGTCCGTGAGCAACATCGCTGACTCCTCTCGCTGCAGCCCC
ACTACCTCCATCTTCCCTTCTCCTCTCTTTCTTCTACGTCCCACTCACTC
ACTCCTCACGCCACCAACACCCACGATACGCACAGCTTAGCATATAAATA
TAAATATATCAACGATATGACCATGCAACCGAAGAAGAAGGGGGCGTTGG
GACGAACATCAACGGCGAAAAGCAAGGAGGAACGGATGGGAGCGTACGGA
AATAAATACGAGGAGGAGGAGGAGGAGGAAAACGACGAGGAGGAGGACGA
GGAGGATAGGCAGGGCGGTGGCGCGCCTTGGTGTCGACAGAATCCTGCAG
TAGGAGGAAGAGGAGACGATGGCGTGCCCATGGCTGTAGCGCGCCAGGCC
AATAAACTTGGTTACGCGTGCTTTGACGAGGAACGGAGCACCATTTACGT
CAACGAGCTGCTGGTGGGCTCCGACTTCCGGGAGACGGTCCAAGCCCTCA
AGCTGCACCTCGGCCCCACTTCCTTCCTCATCGATGCATACCTTCTCGCC
GACGAAGACTTTTGCAAGCTCCTGGGGTGCGCCATCTCGGAGGATCGCCC
CCAATTTTACATTAAGGTGGCCAAGGCACGTACGCATCCTCCTCCTCCCA
TCGTACCCTCCCTTCCTACATTTGCAATCCTTCCTCACTAACCCTCCCTC
TCCATCCCCATCAGGCTCGCAACTGGGATTTGCGACGTGCCATCACTCAG
CTGTGCACCTGCTTGGAAGTCCGGGAGCTTGCTGAAGCCAGCCGAACGAA
AGTTGAAGATAGGGAAGACGGGCTGATGCTCCAAAACCTTATCTCTGGAA
GCCGGGGAGGAGGGCGAGAGGGCGGAGCAGGAGCTGGAGGGTTAGATCCA
CGAAGGAATTACGACCGATTGAGTTGTGTGATCGACTTTCTGGAGGAGCC
GCTTTTGGTGAAGGCTTTGGGCGCCTTGCTGATTCATTTGCAGGGGCGTG
TGTTTTCGCTTGAGATGGCGGGAAGGGTGCCGGTGGGGAGGCTGAGGAGG
TTCGACCTTGCGGGGTTTGTGAGGCTGGACAATAACGCCTTGATGAGCTT
GCAGATTTTTCATGAGGAGAAACATCCGAATGTGATCAATGGGAGGGGGA
AGGCGAAGGAGGGGTTTTCGTTGTTTAGTTTGTTGGATCAGACGAGGAGC
AGGCCGGGGAGGAAGGTTTTGAAGGAGTGGATGTTGCGGCCTTTGCGTTG
TGTGGAAAAGATAGAGGAGAGGCAGATGATGGTTGAATTGTTGCTGCAAG
GGGAGGCGATGGAGGTGGTGAACAATGCGGGGCGGTTGCTCGGGAGGGTG
GGGGATGTGGGCAGGGTGCTATTGAGGGTGAAGAGGGCTGGAGCCACGGT
GAACGATTGGCTGACGCTCGCGAATACGGCTCAACATGTTTTGCTCCTAC
AAAACTGCCTAATCGTGCTTGGCCACGTGGCAATCCGGCAGGAAAGAGTG
GTGGAGGGGGGGAAGGAGGAGGGAGGGGCTGCCCGGGTGGTGCGGGGGGT
CTTGGAACGGATTTCGGGGGAGGCAGTGAGGAGGGTGCAAGAGGTGGTTA
CTTGTGTCGTTGATCTGGAGATCACGAAGGAGAGTAAGGTGGTGGCGGTG
AGGACCGGCTGTGATGCCGAGTTGGATCGGCTTAGGGCAGAGTACGACAA
TTTGGAGGAGTTTTTGAGTGGGGAGGCACGAGATGTTTTGGCGGAGCAGG
CGTCGCGCTTGCTATCCACGGTGTCGGTGCAGTTTCTGCCTCAGGTCGGC
TTCCTGGTCATCGTGCAAGCCAGTGAGAAAGTGGCCGTGGAGACCGACCC
GCGCTTCCGTTTTGTCTTTGCCGAGGGCGAGTCGGTGTACTACAAAACCC
CGCGGATGGACGTGCTGGACGACAGCATCGGCGACTTGGCTGCGGCGATC
CACGACCGAGAGGCGACGTTGCTCCGAGCGGTGGGAGAAGAGGTGTTGAA
AGAGGAAGTCCCACTCACAGAGGCAGTGCGTGCCTGCGCAGAGGTCGATG
TGCTCCTGTCCTTCGCCCAGGTCGCGGGGGGATTGGCCTGGGTGAAGCCC
ATGATCACGGAGGACAAGGTGGTGGTCGTCAAAGATGGAAGGCACCCCTT
GCAGGAACTGGCCGTGGAAGTCTTCATCCCCAATGATGTCTTTCTGGTCG
GCAAGGGCGGGGAGTCATCCGACAGGCAGCAGCAGGAGGGAAGGGGAAAA
AGCGAAAAGGAGAAGGCGAATGAAGAGGGGGAGGAGGGTGAGCAGCAGCA
GCAGGAGAGGCGGCAGAAGCGGCGGCCGGAGGGAGGGCGAGGCCTGGCAG
TCGTGACCGGTCCCAACTTCTCGGGGAAGAGTGTGTATATTAAGACGGTG
GGCGTGCTGACTTACCTCGCCCACCTTGGGTGCTTCCTGCCGTGCCAGCA
AGCCTTGATTGGGCTGGTGGACGGGATCTACACCAGGATTGCGAGTGCTG
AGACGGTGACAGTGCAGCAAAGTACCTTTACCATAGATTGCAGTCAAATG
AACGCTGTCTTTCGGAATGCCACCCCCTCCTCCCTCATCCTAGTGGACGA
ATTTGGCAAAGGGTCCGCCGAGACCGACGGCCTGGCTCTGCTGGTCGCCT
GCCTCTCCCGCCTGCATATCCTGGGTGCCCGCACGCTTGTCACGACGCAT
TTTCTCGAGCTCTTTCAACGCAAGGGCCTCCTCTCCCCTCACCTCGCCTA
CGAGATATCTTACCGCATGGACGTGTTTGTACCGCCCCCCGCTCCCTCCT
CTAACCCTCCCTCTACGAGCAGCAGTGGAAGCAGCAGCATTCAGACAGTC
GTCCCTTTGTTCAAGCTGACGAAAGGCGTCGCTACTTCTTCTGACGGTTT
TTCGTGCGCAGTTCTAGCAGGGCTTGCCTCACCTTTGGTGAAACGAGCGG
AGCACGTCGCGCGTTGTCTCGTGGAGGGTACTCTGTCGATTCATCCCCTT
CCTCGTCCTCTTTCGTGGAGGAAGGAGGGAGGGGGGGAGAAGGAGGAGGA
AAAGGAGGCGGAGGAGGCGGGAAAGGGGGAGGAGGAGGAGGGAGGGAAGG
GGGGGCGGGAGGTATTGCGGTATAATAAGGAGGCGCAAGAGGTGCTTAGA
GCGTTTATGGCGGTGGAGGACTGGACGGAGTGTGGGGAGAAAGAGACGCA
ACAGTTTGTGGAGTTGCTTCAGAAAGTGTAG

protein sequence of NO13G01780.3

>NO13G01780.3-protein ID=NO13G01780.3-protein|Name=NO13G01780.3|organism=Nannochloropsis oceanica|type=polypeptide|length=802bp
MLQNLISGSRGGGREGGAGAGGLDPRRNYDRLSCVIDFLEEPLLVKALGA
LLIHLQGRVFSLEMAGRVPVGRLRRFDLAGFVRLDNNALMSLQIFHEEKH
PNVINGRGKAKEGFSLFSLLDQTRSRPGRKVLKEWMLRPLRCVEKIEERQ
MMVELLLQGEAMEVVNNAGRLLGRVGDVGRVLLRVKRAGATVNDWLTLAN
TAQHVLLLQNCLIVLGHVAIRQERVVEGGKEEGGAARVVRGVLERISGEA
VRRVQEVVTCVVDLEITKESKVVAVRTGCDAELDRLRAEYDNLEEFLSGE
ARDVLAEQASRLLSTVSVQFLPQVGFLVIVQASEKVAVETDPRFRFVFAE
GESVYYKTPRMDVLDDSIGDLAAAIHDREATLLRAVGEEVLKEEVPLTEA
VRACAEVDVLLSFAQVAGGLAWVKPMITEDKVVVVKDGRHPLQELAVEVF
IPNDVFLVGKGGESSDRQQQEGRGKSEKEKANEEGEEGEQQQQERRQKRR
PEGGRGLAVVTGPNFSGKSVYIKTVGVLTYLAHLGCFLPCQQALIGLVDG
IYTRIASAETVTVQQSTFTIDCSQMNAVFRNATPSSLILVDEFGKGSAET
DGLALLVACLSRLHILGARTLVTTHFLELFQRKGLLSPHLAYEISYRMDV
FVPPPAPSSNPPSTSSSGSSSIQTVVPLFKLTKGVATSSDGFSCAVLAGL
ASPLVKRAEHVARCLVEGTLSIHPLPRPLSWRKEGGGEKEEEKEAEEAGK
GEEEEGGKGGREVLRYNKEAQEVLRAFMAVEDWTECGEKETQQFVELLQK
V*

mRNA from alignment at chr13:521299..525576-

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>NO13G01780.3 ID=NO13G01780.3|Name=NO13G01780.3|organism=Nannochloropsis oceanica|type=mRNA|length=4278bp|location=Sequence derived from alignment at chr13:521299..525576- (Nannochloropsis oceanica)
CTCGAGACTGTAGTGGTGGAGGATAAGGACGTGTGGTGTTAAGTTGATGC
CTTGATGGGCTCTGAAAACCTCCTGTCTCAAGCGAAGAGCACAAGAAGTG
CACTCTTTATTAATGCAAATCTCATCCACTGCCCTGCTTTGCGACATCAT
TTCACACAGCAACACTACCCTGCTTGTGTGCCCAGGCCTCATCAAGCGGC
TCTCGTCAACGTCCGTGAGCAACATCGCTGACTCCTCTCGCTGCAGCCCC
ACTACCTCCATCTTCCCTTCTCCTCTCTTTCTTCTACGTCCCACTCACTC
ACTCCTCACGCCACCAACACCCACGATACGCACAGCTTAGCATATAAATA
TAAATATATCAACGATATGACCATGCAACCGAAGAAGAAGGGGGCGTTGG
GACGAACATCAACGGCGAAAAGCAAGGAGGAACGGATGGGAGCGTACGGA
AATAAATACGAGGAGGAGGAGGAGGAGGAAAACGACGAGGAGGAGGACGA
GGAGGATAGGCAGGGCGGTGGCGCGCCTTGGTGTCGACAGAATCCTGCAG
TAGGAGGAAGAGGAGACGATGGCGTGCCCATGGCTGTAGCGCGCCAGGCC
AATAAACTTGGTTACGCGTGCTTTGACGAGGAACGGAGCACCATTTACGT
CAACGAGCTGCTGGGTGAGTCATCGAAATAAAGAAGCGCATGGGGAAGCG
TGGGAGGGGGAGAATATCTAAGGCGTACCTGGCCCAGTGTCACGTCTCGC
GTCAGACATTCATCTGCCTCACCTCGTCCTTCCCTATTTATTTCCCTCTC
CTCCACACAGTGGGCTCCGACTTCCGGGAGACGGTCCAAGCCCTCAAGCT
GCACCTCGGCCCCACTTCCTTCCTCATCGATGCATACCTTCTCGCCGACG
AAGACTTTTGCAAGCTCCTGGGGTGCGCCATCTCGGAGGATCGCCCCCAA
TTTTACATTAAGGTGGCCAAGGCACGTACGCATCCTCCTCCTCCCATCGT
ACCCTCCCTTCCTACATTTGCAATCCTTCCTCACTAACCCTCCCTCTCCA
TCCCCATCAGGCTCGCAACTGGGATTTGCGACGTGCCATCACTCAGCTGT
GCACCTGCTTGGAAGTCCGGGAGCTTGCTGAAGCCAGCCGAACGAAAGTT
GAAGATAGGGAAGACGGGCTGATGCTCCAAAACCTTATCTCTGGAAGCCG
GGGAGGAGGGCGAGAGGGCGGAGCAGGAGCTGGAGGGTTAGATCCACGAA
GGAATTACGACCGATTGAGTTGTGTGATCGACTTTCTGGAGGAGCCGCTT
TTGGTGAAGGCTTTGGGCGCCTTGCTGATTCATTTGCAGGGGCGTGTGTT
TTCGCTTGAGATGGCGGGAAGGGTGCCGGTGGGGAGGCTGAGGAGGTTCG
ACCTTGCGGGGTTTGTGAGGCTGGACAATAACGCCTTGATGAGCTTGCAG
ATTTTTCATGAGGAGAAACATCCGAATGTGATCAATGGGAGGGGGAAGGC
GAAGGAGGGGTTTTCGTTGTTTAGTTTGTTGGATCAGACGAGGAGCAGGC
CGGGGAGGAAGGTTTTGAAGGAGTGGATGTTGCGGCCTTTGCGTTGTGTG
GAAAAGATAGAGGAGAGGCAGATGATGGTTGAATTGTTGCTGCAAGGGGA
GGCGATGGAGGTGGTGAACAATGCGGGGCGGTTGCTCGGGAGGGTGGGGG
ATGTGGGCAGGGTGCTATTGAGGGTGAAGAGGGCTGGAGCCACGGTGAAC
GATTGGCTGACGCTCGCGAATACGGCTCAACATGTTTTGCTCCTACAAAA
CTGCCTAATCGTGCTTGGCCACGTGGCAATCCGGCAGGAAAGAGTGGTGG
AGGGGGGGAAGGAGGAGGGAGGGGCTGCCCGGGTGGTGCGGGGGGTCTTG
GAACGGATTTCGGGGGAGGCAGTGAGGAGGGTGCAAGAGGTGGTTACTTG
TGTCGTTGATCTGGAGATCACGAAGGAGAGTAAGGTGGTGGCGGTGAGGA
CCGGCTGTGATGCCGAGTTGGATCGGCTTAGGGCAGAGTACGACAATTTG
GAGGAGTTTTTGAGTGGGGAGGCACGAGATGTTTTGGCGGAGCAGGCGTC
GCGCTTGCTATCCACGGTGTCGGTGCAGTTTCTGCCTCAGGTAGGCCATG
CTCTTTTTTTCGCATTTCTTTCTACTTTGATCTTGAATCGTTTTCACCGG
AAACCCTTTCTTTTCACTCCCCCTCCCTCCCTCCCTCCCTCTTCCTCACC
TCCCTCCCTCCCTCCCCTCCCCTAGGTCGGCTTCCTGGTCATCGTGCAAG
CCAGTGAGAAAGTGGCCGTGGAGACCGACCCGCGCTTCCGTTTTGTCTTT
GCCGAGGGCGAGTCGGTGTACTACAAAACCCCGCGGATGGACGTGCTGGA
CGACAGCATCGGCGACTTGGCTGCGGCGATCCACGACCGAGAGGCGACGT
TGCTCCGAGCGGTGGGAGAAGAGGTAGGTGAGGGAGGGAGAGAGAGAAGG
AGGGAGTGAGGAAAGGAGGAGAGCCGAGATAGATCATCCAGCCTAACCAT
CCCTCCCCCCCTCTCTGCCGTCTTCCCCGCGCAGGTGTTGAAAGAGGAAG
TCCCACTCACAGAGGCAGTGCGTGCCTGCGCAGAGGTCGATGTGCTCCTG
TCCTTCGCCCAGGTCGCGGGGGGATTGGCCTGGGTGAAGCCCATGATCAC
GGAGGACAAGGTGGTGGTCGTCAAAGATGGAAGGCACCCCTTGCAGGTAG
GGAAGGAAGGAGGGCTTGTCTTCTCCCAAGGGGAGGTTGGGGTGGTACCA
CTCGGAGGGTGACGGAGACGACGTGGATGCAGAACCTTGAGGGTCATCGA
CGACGTCTGCGCCCCATGAGGGTACGCGTGCCCTCCTTCTTTAATTTCCT
TCCTCCAGTTATATCTTCTTTCCTACGTACTTCTTCCTTCCTCCTGCCTC
CCTCCCCGCAGGAACTGGCCGTGGAAGTCTTCATCCCCAATGATGTCTTT
CTGGTCGGCAAGGGCGGGGAGTCATCCGACAGGCAGCAGCAGGAGGGAAG
GGGAAAAAGCGAAAAGGAGAAGGCGAATGAAGAGGGGGAGGAGGGTGAGC
AGCAGCAGCAGGAGAGGCGGCAGAAGCGGCGGCCGGAGGGAGGGCGAGGC
CTGGCAGTCGTGACCGGTCCCAACTTCTCGGGGAAGAGTGTGTATATTAA
GACGGTGGGCGTGCTGACTTACCTCGCCCACCTTGGGTGCTTCCTGCCGT
GCCAGCAAGCCTTGATTGGGCTGGTGGACGGGATCTACACCAGGATTGCG
AGTGCTGAGACGGTGACAGTGCAGCAAAGTACCTTTACCATAGATTGCAG
GTAGGGGCTGGAGGGAGGGAGGGAGAGGGGAGGGAGGGAGGGAGGGTTCA
CACCCAGCAATAGTCGACTGGGTTTCCGCACCTTGTGGGCCCCCACACCC
CACCCTCCTCCTCCCCTAGTCAAATGAACGCTGTCTTTCGGAATGCCACC
CCCTCCTCCCTCATCCTAGGTACGTCACAGCAGAGGCGCAGAAGAGAGGG
AGGGAAAGGGGGCGAGAGGACGAGAGAAAAGACAACGTATTGTTCTCAGC
CCATCTCCCTCCCATCCTCTCTCCCTCTTTCCACACCCAGTGGACGAATT
TGGCAAAGGGTCCGCCGAGACCGACGGCCTGGCTCTGCTGGTCGCCTGCC
TCTCCCGCCTGCATATCCTGGGTGCCCGCACGCTTGTCACGACGCATTTT
CTCGAGCTCTTTCAACGCAAGGGCCTCCTCTCCCCTCACCTCGCCTACGA
GATATCTTACCGCATGGACGTGTTTGTACCGCCCCCCGCTCCCTCCTCTA
ACCCTCCCTCTACGAGCAGCAGTGGAAGCAGCAGCATTCAGACAGTCGTC
CCTTTGTTCAAGCTGACGAAAGGCGTCGCTACTTCTTCTGACGGTTTTTC
GTGCGCAGTTCTAGCAGGGCTTGCCTCACCTTTGGTGAAACGAGCGGAGC
ACGTCGCGCGTTGTCTCGTGGAGGGTACTCTGTCGATTCATCCCCTTCCT
CGTCCTCTTTCGTGGAGGAAGGAGGGAGGGGGGGAGAAGGAGGAGGAAAA
GGAGGCGGAGGAGGCGGGAAAGGGGGAGGAGGAGGAGGGAGGGAAGGGGG
GGCGGGAGGTATTGCGGTATAATAAGGAGGCGCAAGAGGTGCTTAGAGCG
TTTATGGCGGTGGAGGACTGGACGGAGTGTGGGGAGAAAGAGACGCAACA
GTTTGTGGAGTTGCTTCAGAAAGTGTAG

Coding sequence (CDS) from alignment at chr13:521299..525576-

>NO13G01780.3 ID=NO13G01780.3|Name=NO13G01780.3|organism=Nannochloropsis oceanica|type=CDS|length=2406bp|location=Sequence derived from alignment at chr13:521299..525576- (Nannochloropsis oceanica)
ATGCTCCAAAACCTTATCTCTGGAAGCCGGGGAGGAGGGCGAGAGGGCGG
AGCAGGAGCTGGAGGGTTAGATCCACGAAGGAATTACGACCGATTGAGTT
GTGTGATCGACTTTCTGGAGGAGCCGCTTTTGGTGAAGGCTTTGGGCGCC
TTGCTGATTCATTTGCAGGGGCGTGTGTTTTCGCTTGAGATGGCGGGAAG
GGTGCCGGTGGGGAGGCTGAGGAGGTTCGACCTTGCGGGGTTTGTGAGGC
TGGACAATAACGCCTTGATGAGCTTGCAGATTTTTCATGAGGAGAAACAT
CCGAATGTGATCAATGGGAGGGGGAAGGCGAAGGAGGGGTTTTCGTTGTT
TAGTTTGTTGGATCAGACGAGGAGCAGGCCGGGGAGGAAGGTTTTGAAGG
AGTGGATGTTGCGGCCTTTGCGTTGTGTGGAAAAGATAGAGGAGAGGCAG
ATGATGGTTGAATTGTTGCTGCAAGGGGAGGCGATGGAGGTGGTGAACAA
TGCGGGGCGGTTGCTCGGGAGGGTGGGGGATGTGGGCAGGGTGCTATTGA
GGGTGAAGAGGGCTGGAGCCACGGTGAACGATTGGCTGACGCTCGCGAAT
ACGGCTCAACATGTTTTGCTCCTACAAAACTGCCTAATCGTGCTTGGCCA
CGTGGCAATCCGGCAGGAAAGAGTGGTGGAGGGGGGGAAGGAGGAGGGAG
GGGCTGCCCGGGTGGTGCGGGGGGTCTTGGAACGGATTTCGGGGGAGGCA
GTGAGGAGGGTGCAAGAGGTGGTTACTTGTGTCGTTGATCTGGAGATCAC
GAAGGAGAGTAAGGTGGTGGCGGTGAGGACCGGCTGTGATGCCGAGTTGG
ATCGGCTTAGGGCAGAGTACGACAATTTGGAGGAGTTTTTGAGTGGGGAG
GCACGAGATGTTTTGGCGGAGCAGGCGTCGCGCTTGCTATCCACGGTGTC
GGTGCAGTTTCTGCCTCAGGTCGGCTTCCTGGTCATCGTGCAAGCCAGTG
AGAAAGTGGCCGTGGAGACCGACCCGCGCTTCCGTTTTGTCTTTGCCGAG
GGCGAGTCGGTGTACTACAAAACCCCGCGGATGGACGTGCTGGACGACAG
CATCGGCGACTTGGCTGCGGCGATCCACGACCGAGAGGCGACGTTGCTCC
GAGCGGTGGGAGAAGAGGTGTTGAAAGAGGAAGTCCCACTCACAGAGGCA
GTGCGTGCCTGCGCAGAGGTCGATGTGCTCCTGTCCTTCGCCCAGGTCGC
GGGGGGATTGGCCTGGGTGAAGCCCATGATCACGGAGGACAAGGTGGTGG
TCGTCAAAGATGGAAGGCACCCCTTGCAGGAACTGGCCGTGGAAGTCTTC
ATCCCCAATGATGTCTTTCTGGTCGGCAAGGGCGGGGAGTCATCCGACAG
GCAGCAGCAGGAGGGAAGGGGAAAAAGCGAAAAGGAGAAGGCGAATGAAG
AGGGGGAGGAGGGTGAGCAGCAGCAGCAGGAGAGGCGGCAGAAGCGGCGG
CCGGAGGGAGGGCGAGGCCTGGCAGTCGTGACCGGTCCCAACTTCTCGGG
GAAGAGTGTGTATATTAAGACGGTGGGCGTGCTGACTTACCTCGCCCACC
TTGGGTGCTTCCTGCCGTGCCAGCAAGCCTTGATTGGGCTGGTGGACGGG
ATCTACACCAGGATTGCGAGTGCTGAGACGGTGACAGTGCAGCAAAGTAC
CTTTACCATAGATTGCAGTCAAATGAACGCTGTCTTTCGGAATGCCACCC
CCTCCTCCCTCATCCTAGTGGACGAATTTGGCAAAGGGTCCGCCGAGACC
GACGGCCTGGCTCTGCTGGTCGCCTGCCTCTCCCGCCTGCATATCCTGGG
TGCCCGCACGCTTGTCACGACGCATTTTCTCGAGCTCTTTCAACGCAAGG
GCCTCCTCTCCCCTCACCTCGCCTACGAGATATCTTACCGCATGGACGTG
TTTGTACCGCCCCCCGCTCCCTCCTCTAACCCTCCCTCTACGAGCAGCAG
TGGAAGCAGCAGCATTCAGACAGTCGTCCCTTTGTTCAAGCTGACGAAAG
GCGTCGCTACTTCTTCTGACGGTTTTTCGTGCGCAGTTCTAGCAGGGCTT
GCCTCACCTTTGGTGAAACGAGCGGAGCACGTCGCGCGTTGTCTCGTGGA
GGGTACTCTGTCGATTCATCCCCTTCCTCGTCCTCTTTCGTGGAGGAAGG
AGGGAGGGGGGGAGAAGGAGGAGGAAAAGGAGGCGGAGGAGGCGGGAAAG
GGGGAGGAGGAGGAGGGAGGGAAGGGGGGGCGGGAGGTATTGCGGTATAA
TAAGGAGGCGCAAGAGGTGCTTAGAGCGTTTATGGCGGTGGAGGACTGGA
CGGAGTGTGGGGAGAAAGAGACGCAACAGTTTGTGGAGTTGCTTCAGAAA
GTGTAG

Synonyms

Publications