NO13G01780.1, NO13G01780.1 (mRNA) Nannochloropsis oceanica | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	NO13G01780.1
Unique Name	NO13G01780.1
Type	mRNA
Organism	Nannochloropsis oceanica (N. oceanica IMET1)
Sequence length	3342
Alignment location	chr13:521299..525576 -

Link to JBrowse

Properties

Mutants

Expression

No biomaterial libraries express this feature.

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
chr13	genome	chr13:521299..525576 -

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Gene prediction for N. oceanica IMET1	2017-10-24
Homology annotation for N. oceanica IMET1	2017-10-25
InterPro analysis for N. oceanica IMET1	2017-10-25

Annotated Terms

Homology

[Close]

BLAST of NO13G01780.1 vs.
Match: EWM21854.1 (mismatch repair protein 5 [Nannochloropsis gaditana])

HSP 1 Score: 1144.4 bits (2959), Expect = 0.000e+0
Identity = 619/966 (64.08%), Postives = 743/966 (76.92%), Query Frame = 0

Query:   54 PWCRQNPAVGGRGDDGVPMAVARQANKLGYACFDEERSTIYVNELLVGSDFRETVQALKLHLGPTSFLIDAYLLADEDFCKLLGCAISEDRPQFYIKVAKARNWDLRRAITQLCTCLEVRELAEASRTKVEDREDGLMLQNLISGSRGGGR-----EGGAGAG---GLDPRRNYDRLSCVIDFLEEPLLVKALGALLIHLQGRVFSLEMAGRVPVGRLRRFDLAGFVRLDNNALMSLQIFHEEKHPNVINGRGKAKEGFSLFSLLDQTRSRPGRKVLKEWMLRPLRCVEKIEERQMMVELLLQGEAMEVVNNAGRLLGRVGDVGRVLLRVKRAGATVNDWLTLANTAQHVLLLQNCLIVLGHVAIRQERVVEGGKEEGG-------------AARVVRGVLERISGEAVRRVQEVVTCVVDLEITKESKVVAVRTGCDAELDRLRAEYDNLEEFLSGEARDVLAEQASRLLSTVSVQFLPQVGFLVIVQASEKVAVETDPRFRFVFAEGESVYYKTPRMDVLDDSIGDLAAAIHDREATLLRAVGEEVLKEEVPLTEAVRACAEVDVLLSFAQVAGGLAWVKPMITEDKVVVVKDGRHPLQELAVEVFIPNDVFLVGKGGESSDRQQQEGRGKSEKEKANEEGEEGEQQQQERRQKRRPEGGRGLAVVTGPNFSGKSVYIKTVGVLTYLAHLGCFLPCQQALIGLVDGIYTRIASAETVTVQQSTFTIDCSQMNAVFRNATPSSLILVDEFGKGSAETDGLALLVACLSRLHILGARTLVTTHFLELFQRKGLLSPHLAYEISYRMDVFVPPPAPSSNP-----PSTSSS--GSSSIQTVVPLFKLTKGVATSSDGFSCAVLAGLASPLVKRAEHVARCLVEGTLSIHPLPRPLSWRKEGGGEKEEEKEAEEAGKGEEEEGGKGGREVLRYNKEAQEVLRAFMAVEDWTECGEKETQQFVELLQKV 992
            PW +Q  A G    +G  MA+AR+  KLGYACFDE++STI+V+E+LV +D RETVQALK+HLGPTSFLIDA+LLADE FCKLLG ++SEDRPQF+++VAKAR+WD RRA++QLC CL+VR+LA+   ++       L  + L + S          + G+G G   GLDPRRNYDRLSCVIDF+ E LLVKALGALL+HLQ   F LE+ GRV V  L RFDL  FV LD+NAL SLQIFHEEKHPNVI+GRGKAKEGFSLF+LLDQT S PGRK LKEWMLRPLR V  I ERQ MVELLL  EAMEVV NAG LLG+VGD+ R+L R++RAG+TVNDWLTLANTA+H+LLLQ+CL VL H+  R     + G    G             A  +++G L+RIS +AV RV E +T V+DLEIT+ESK +AVR GCD ELDRLR +YD LEEFLS EAR VLAEQ+S+LLS +SVQFLPQVGFLVIVQA+E++AVE DPRFRFVFAEG+++YYKTPRMDVLDDSIGDL+AAI DRE  LLR + EE+LKEE  L EAVRACAE+DVL++FAQ+AGGLAWV+PM+TE++VVVVKDGRHPLQEL VE FIPNDVFL+G  G +  R                +G + +  Q++  +     G RG+AVVTGPNFSGKSVYIK VGVL YLAHLGCFLPC+QALIG+VD I TRIASAETVTVQQS+FTIDCSQMNAVF+NA+PSSL+LVDEFGKGSAETDGLALLVACLSRL  LGAR LVTTHFLELFQRKGLLSP LA +ISYRMD+FVPP  P ++P     P+T++S   +++I T+VPLFKLTKGVA+SSDGFSCA LAGLA  L+KRAE +A+  VEG++ I PL RP+++R  GG E E+E++ +             GREVLR+N +AQE L  F+ VEDW    +++ Q F+ELL++V
Sbjct:    2 PWKQQENASGIESYEGKTMALARKGTKLGYACFDEDKSTIWVDEILVSTDIRETVQALKMHLGPTSFLIDAHLLADEGFCKLLGSSVSEDRPQFHVRVAKARDWDTRRAVSQLCHCLDVRQLAKGPHSRNRGHAIYLRNERLATSSEAASSPFFMDDKGSGQGRDEGLDPRRNYDRLSCVIDFMSENLLVKALGALLVHLQCTTFQLEIGGRVTVQTLERFDLGSFVHLDSNALTSLQIFHEEKHPNVISGRGKAKEGFSLFALLDQTHSLPGRKCLKEWMLRPLRSVRGIRERQNMVELLLHPEAMEVVTNAGMLLGKVGDIQRILTRMRRAGSTVNDWLTLANTAEHILLLQSCLAVLAHLTARLSSASDKGPTTAGEEEHRTNEGSYSSAMAMLQGFLDRISRQAVGRVSEALTKVLDLEITRESKSMAVRLGCDEELDRLRGDYDGLEEFLSEEARGVLAEQSSQLLSKISVQFLPQVGFLVIVQANERIAVENDPRFRFVFAEGDALYYKTPRMDVLDDSIGDLSAAIQDREGLLLRQLAEEILKEETALAEAVRACAELDVLMAFAQLAGGLAWVRPMVTEERVVVVKDGRHPLQELTVETFIPNDVFLMGGDGNAVHR----------------DGGDEKHAQKQGLEHCNQHGTRGVAVVTGPNFSGKSVYIKMVGVLVYLAHLGCFLPCRQALIGVVDSIRTRIASAETVTVQQSSFTIDCSQMNAVFQNASPSSLVLVDEFGKGSAETDGLALLVACLSRLQRLGARALVTTHFLELFQRKGLLSPQLANDISYRMDIFVPPLPPPTSPSVSSSPATAASTPSAANIHTIVPLFKLTKGVASSSDGFSCAALAGLAPSLIKRAEQIAKYHVEGSMKIEPLARPIAFR--GGSENEKEEKNQ-------------GREVLRFNLQAQEALELFLGVEDWLLKKDQDLQGFIELLEQV 936

The following BLAST results are available for this feature:

BLAST of NO13G01780.1 vs.

BLAST of NO13G01780.1 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 1


Match Name	E-value	Identity	Description
EWM21854.1	0.000e+0	64.08	mismatch repair protein 5 [Nannochloropsis gaditan...	[more]

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
NO13G01780	NO13G01780	Nannochloropsis oceanica (N. oceanica IMET1)	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
NO13G01780.1	NO13G01780.1-protein	Nannochloropsis oceanica (N. oceanica IMET1)	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
NO13G01780.1.cds1	NO13G01780.1.cds1	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO13G01780.1.cds2	NO13G01780.1.cds2	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO13G01780.1.cds3	NO13G01780.1.cds3	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO13G01780.1.cds4	NO13G01780.1.cds4	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO13G01780.1.cds5	NO13G01780.1.cds5	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO13G01780.1.cds6	NO13G01780.1.cds6	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO13G01780.1.cds7	NO13G01780.1.cds7	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO13G01780.1.cds8	NO13G01780.1.cds8	Nannochloropsis oceanica (N. oceanica IMET1)	CDS

Sequences

The following sequences are available for this feature:

mRNA sequence
protein sequence
mRNA from alignment at chr13:521299..525576-
coding sequence from alignment at chr13:521299..525576-

mRNA sequence

>NO13G01780.1 ID=NO13G01780.1|Name=NO13G01780.1|organism=Nannochloropsis oceanica|type=mRNA|length=3342bp
CTCGAGACTGTAGTGGTGGAGGATAAGGACGTGTGGTGTTAAGTTGATGC
CTTGATGGGCTCTGAAAACCTCCTGTCTCAAGCGAAGAGCACAAGAAGTG
CACTCTTTATTAATGCAAATCTCATCCACTGCCCTGCTTTGCGACATCAT
TTCACACAGCAACACTACCCTGCTTGTGTGCCCAGGCCTCATCAAGCGGC
TCTCGTCAACGTCCGTGAGCAACATCGCTGACTCCTCTCGCTGCAGCCCC
ACTACCTCCATCTTCCCTTCTCCTCTCTTTCTTCTACGTCCCACTCACTC
ACTCCTCACGCCACCAACACCCACGATACGCACAGCTTAGCATATAAATA
TAAATATATCAACGATATGACCATGCAACCGAAGAAGAAGGGGGCGTTGG
GACGAACATCAACGGCGAAAAGCAAGGAGGAACGGATGGGAGCGTACGGA
AATAAATACGAGGAGGAGGAGGAGGAGGAAAACGACGAGGAGGAGGACGA
GGAGGATAGGCAGGGCGGTGGCGCGCCTTGGTGTCGACAGAATCCTGCAG
TAGGAGGAAGAGGAGACGATGGCGTGCCCATGGCTGTAGCGCGCCAGGCC
AATAAACTTGGTTACGCGTGCTTTGACGAGGAACGGAGCACCATTTACGT
CAACGAGCTGCTGGTGGGCTCCGACTTCCGGGAGACGGTCCAAGCCCTCA
AGCTGCACCTCGGCCCCACTTCCTTCCTCATCGATGCATACCTTCTCGCC
GACGAAGACTTTTGCAAGCTCCTGGGGTGCGCCATCTCGGAGGATCGCCC
CCAATTTTACATTAAGGTGGCCAAGGCTCGCAACTGGGATTTGCGACGTG
CCATCACTCAGCTGTGCACCTGCTTGGAAGTCCGGGAGCTTGCTGAAGCC
AGCCGAACGAAAGTTGAAGATAGGGAAGACGGGCTGATGCTCCAAAACCT
TATCTCTGGAAGCCGGGGAGGAGGGCGAGAGGGCGGAGCAGGAGCTGGAG
GGTTAGATCCACGAAGGAATTACGACCGATTGAGTTGTGTGATCGACTTT
CTGGAGGAGCCGCTTTTGGTGAAGGCTTTGGGCGCCTTGCTGATTCATTT
GCAGGGGCGTGTGTTTTCGCTTGAGATGGCGGGAAGGGTGCCGGTGGGGA
GGCTGAGGAGGTTCGACCTTGCGGGGTTTGTGAGGCTGGACAATAACGCC
TTGATGAGCTTGCAGATTTTTCATGAGGAGAAACATCCGAATGTGATCAA
TGGGAGGGGGAAGGCGAAGGAGGGGTTTTCGTTGTTTAGTTTGTTGGATC
AGACGAGGAGCAGGCCGGGGAGGAAGGTTTTGAAGGAGTGGATGTTGCGG
CCTTTGCGTTGTGTGGAAAAGATAGAGGAGAGGCAGATGATGGTTGAATT
GTTGCTGCAAGGGGAGGCGATGGAGGTGGTGAACAATGCGGGGCGGTTGC
TCGGGAGGGTGGGGGATGTGGGCAGGGTGCTATTGAGGGTGAAGAGGGCT
GGAGCCACGGTGAACGATTGGCTGACGCTCGCGAATACGGCTCAACATGT
TTTGCTCCTACAAAACTGCCTAATCGTGCTTGGCCACGTGGCAATCCGGC
AGGAAAGAGTGGTGGAGGGGGGGAAGGAGGAGGGAGGGGCTGCCCGGGTG
GTGCGGGGGGTCTTGGAACGGATTTCGGGGGAGGCAGTGAGGAGGGTGCA
AGAGGTGGTTACTTGTGTCGTTGATCTGGAGATCACGAAGGAGAGTAAGG
TGGTGGCGGTGAGGACCGGCTGTGATGCCGAGTTGGATCGGCTTAGGGCA
GAGTACGACAATTTGGAGGAGTTTTTGAGTGGGGAGGCACGAGATGTTTT
GGCGGAGCAGGCGTCGCGCTTGCTATCCACGGTGTCGGTGCAGTTTCTGC
CTCAGGTCGGCTTCCTGGTCATCGTGCAAGCCAGTGAGAAAGTGGCCGTG
GAGACCGACCCGCGCTTCCGTTTTGTCTTTGCCGAGGGCGAGTCGGTGTA
CTACAAAACCCCGCGGATGGACGTGCTGGACGACAGCATCGGCGACTTGG
CTGCGGCGATCCACGACCGAGAGGCGACGTTGCTCCGAGCGGTGGGAGAA
GAGGTGTTGAAAGAGGAAGTCCCACTCACAGAGGCAGTGCGTGCCTGCGC
AGAGGTCGATGTGCTCCTGTCCTTCGCCCAGGTCGCGGGGGGATTGGCCT
GGGTGAAGCCCATGATCACGGAGGACAAGGTGGTGGTCGTCAAAGATGGA
AGGCACCCCTTGCAGGAACTGGCCGTGGAAGTCTTCATCCCCAATGATGT
CTTTCTGGTCGGCAAGGGCGGGGAGTCATCCGACAGGCAGCAGCAGGAGG
GAAGGGGAAAAAGCGAAAAGGAGAAGGCGAATGAAGAGGGGGAGGAGGGT
GAGCAGCAGCAGCAGGAGAGGCGGCAGAAGCGGCGGCCGGAGGGAGGGCG
AGGCCTGGCAGTCGTGACCGGTCCCAACTTCTCGGGGAAGAGTGTGTATA
TTAAGACGGTGGGCGTGCTGACTTACCTCGCCCACCTTGGGTGCTTCCTG
CCGTGCCAGCAAGCCTTGATTGGGCTGGTGGACGGGATCTACACCAGGAT
TGCGAGTGCTGAGACGGTGACAGTGCAGCAAAGTACCTTTACCATAGATT
GCAGTCAAATGAACGCTGTCTTTCGGAATGCCACCCCCTCCTCCCTCATC
CTAGTGGACGAATTTGGCAAAGGGTCCGCCGAGACCGACGGCCTGGCTCT
GCTGGTCGCCTGCCTCTCCCGCCTGCATATCCTGGGTGCCCGCACGCTTG
TCACGACGCATTTTCTCGAGCTCTTTCAACGCAAGGGCCTCCTCTCCCCT
CACCTCGCCTACGAGATATCTTACCGCATGGACGTGTTTGTACCGCCCCC
CGCTCCCTCCTCTAACCCTCCCTCTACGAGCAGCAGTGGAAGCAGCAGCA
TTCAGACAGTCGTCCCTTTGTTCAAGCTGACGAAAGGCGTCGCTACTTCT
TCTGACGGTTTTTCGTGCGCAGTTCTAGCAGGGCTTGCCTCACCTTTGGT
GAAACGAGCGGAGCACGTCGCGCGTTGTCTCGTGGAGGGTACTCTGTCGA
TTCATCCCCTTCCTCGTCCTCTTTCGTGGAGGAAGGAGGGAGGGGGGGAG
AAGGAGGAGGAAAAGGAGGCGGAGGAGGCGGGAAAGGGGGAGGAGGAGGA
GGGAGGGAAGGGGGGGCGGGAGGTATTGCGGTATAATAAGGAGGCGCAAG
AGGTGCTTAGAGCGTTTATGGCGGTGGAGGACTGGACGGAGTGTGGGGAG
AAAGAGACGCAACAGTTTGTGGAGTTGCTTCAGAAAGTGTAG

protein sequence of NO13G01780.1

>NO13G01780.1-protein ID=NO13G01780.1-protein|Name=NO13G01780.1|organism=Nannochloropsis oceanica|type=polypeptide|length=992bp
MTMQPKKKGALGRTSTAKSKEERMGAYGNKYEEEEEEENDEEEDEEDRQG
GGAPWCRQNPAVGGRGDDGVPMAVARQANKLGYACFDEERSTIYVNELLV
GSDFRETVQALKLHLGPTSFLIDAYLLADEDFCKLLGCAISEDRPQFYIK
VAKARNWDLRRAITQLCTCLEVRELAEASRTKVEDREDGLMLQNLISGSR
GGGREGGAGAGGLDPRRNYDRLSCVIDFLEEPLLVKALGALLIHLQGRVF
SLEMAGRVPVGRLRRFDLAGFVRLDNNALMSLQIFHEEKHPNVINGRGKA
KEGFSLFSLLDQTRSRPGRKVLKEWMLRPLRCVEKIEERQMMVELLLQGE
AMEVVNNAGRLLGRVGDVGRVLLRVKRAGATVNDWLTLANTAQHVLLLQN
CLIVLGHVAIRQERVVEGGKEEGGAARVVRGVLERISGEAVRRVQEVVTC
VVDLEITKESKVVAVRTGCDAELDRLRAEYDNLEEFLSGEARDVLAEQAS
RLLSTVSVQFLPQVGFLVIVQASEKVAVETDPRFRFVFAEGESVYYKTPR
MDVLDDSIGDLAAAIHDREATLLRAVGEEVLKEEVPLTEAVRACAEVDVL
LSFAQVAGGLAWVKPMITEDKVVVVKDGRHPLQELAVEVFIPNDVFLVGK
GGESSDRQQQEGRGKSEKEKANEEGEEGEQQQQERRQKRRPEGGRGLAVV
TGPNFSGKSVYIKTVGVLTYLAHLGCFLPCQQALIGLVDGIYTRIASAET
VTVQQSTFTIDCSQMNAVFRNATPSSLILVDEFGKGSAETDGLALLVACL
SRLHILGARTLVTTHFLELFQRKGLLSPHLAYEISYRMDVFVPPPAPSSN
PPSTSSSGSSSIQTVVPLFKLTKGVATSSDGFSCAVLAGLASPLVKRAEH
VARCLVEGTLSIHPLPRPLSWRKEGGGEKEEEKEAEEAGKGEEEEGGKGG
REVLRYNKEAQEVLRAFMAVEDWTECGEKETQQFVELLQKV*

mRNA from alignment at chr13:521299..525576-

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>NO13G01780.1 ID=NO13G01780.1|Name=NO13G01780.1|organism=Nannochloropsis oceanica|type=mRNA|length=4278bp|location=Sequence derived from alignment at chr13:521299..525576- (Nannochloropsis oceanica)
CTCGAGACTGTAGTGGTGGAGGATAAGGACGTGTGGTGTTAAGTTGATGC
CTTGATGGGCTCTGAAAACCTCCTGTCTCAAGCGAAGAGCACAAGAAGTG
CACTCTTTATTAATGCAAATCTCATCCACTGCCCTGCTTTGCGACATCAT
TTCACACAGCAACACTACCCTGCTTGTGTGCCCAGGCCTCATCAAGCGGC
TCTCGTCAACGTCCGTGAGCAACATCGCTGACTCCTCTCGCTGCAGCCCC
ACTACCTCCATCTTCCCTTCTCCTCTCTTTCTTCTACGTCCCACTCACTC
ACTCCTCACGCCACCAACACCCACGATACGCACAGCTTAGCATATAAATA
TAAATATATCAACGATATGACCATGCAACCGAAGAAGAAGGGGGCGTTGG
GACGAACATCAACGGCGAAAAGCAAGGAGGAACGGATGGGAGCGTACGGA
AATAAATACGAGGAGGAGGAGGAGGAGGAAAACGACGAGGAGGAGGACGA
GGAGGATAGGCAGGGCGGTGGCGCGCCTTGGTGTCGACAGAATCCTGCAG
TAGGAGGAAGAGGAGACGATGGCGTGCCCATGGCTGTAGCGCGCCAGGCC
AATAAACTTGGTTACGCGTGCTTTGACGAGGAACGGAGCACCATTTACGT
CAACGAGCTGCTGGGTGAGTCATCGAAATAAAGAAGCGCATGGGGAAGCG
TGGGAGGGGGAGAATATCTAAGGCGTACCTGGCCCAGTGTCACGTCTCGC
GTCAGACATTCATCTGCCTCACCTCGTCCTTCCCTATTTATTTCCCTCTC
CTCCACACAGTGGGCTCCGACTTCCGGGAGACGGTCCAAGCCCTCAAGCT
GCACCTCGGCCCCACTTCCTTCCTCATCGATGCATACCTTCTCGCCGACG
AAGACTTTTGCAAGCTCCTGGGGTGCGCCATCTCGGAGGATCGCCCCCAA
TTTTACATTAAGGTGGCCAAGGCACGTACGCATCCTCCTCCTCCCATCGT
ACCCTCCCTTCCTACATTTGCAATCCTTCCTCACTAACCCTCCCTCTCCA
TCCCCATCAGGCTCGCAACTGGGATTTGCGACGTGCCATCACTCAGCTGT
GCACCTGCTTGGAAGTCCGGGAGCTTGCTGAAGCCAGCCGAACGAAAGTT
GAAGATAGGGAAGACGGGCTGATGCTCCAAAACCTTATCTCTGGAAGCCG
GGGAGGAGGGCGAGAGGGCGGAGCAGGAGCTGGAGGGTTAGATCCACGAA
GGAATTACGACCGATTGAGTTGTGTGATCGACTTTCTGGAGGAGCCGCTT
TTGGTGAAGGCTTTGGGCGCCTTGCTGATTCATTTGCAGGGGCGTGTGTT
TTCGCTTGAGATGGCGGGAAGGGTGCCGGTGGGGAGGCTGAGGAGGTTCG
ACCTTGCGGGGTTTGTGAGGCTGGACAATAACGCCTTGATGAGCTTGCAG
ATTTTTCATGAGGAGAAACATCCGAATGTGATCAATGGGAGGGGGAAGGC
GAAGGAGGGGTTTTCGTTGTTTAGTTTGTTGGATCAGACGAGGAGCAGGC
CGGGGAGGAAGGTTTTGAAGGAGTGGATGTTGCGGCCTTTGCGTTGTGTG
GAAAAGATAGAGGAGAGGCAGATGATGGTTGAATTGTTGCTGCAAGGGGA
GGCGATGGAGGTGGTGAACAATGCGGGGCGGTTGCTCGGGAGGGTGGGGG
ATGTGGGCAGGGTGCTATTGAGGGTGAAGAGGGCTGGAGCCACGGTGAAC
GATTGGCTGACGCTCGCGAATACGGCTCAACATGTTTTGCTCCTACAAAA
CTGCCTAATCGTGCTTGGCCACGTGGCAATCCGGCAGGAAAGAGTGGTGG
AGGGGGGGAAGGAGGAGGGAGGGGCTGCCCGGGTGGTGCGGGGGGTCTTG
GAACGGATTTCGGGGGAGGCAGTGAGGAGGGTGCAAGAGGTGGTTACTTG
TGTCGTTGATCTGGAGATCACGAAGGAGAGTAAGGTGGTGGCGGTGAGGA
CCGGCTGTGATGCCGAGTTGGATCGGCTTAGGGCAGAGTACGACAATTTG
GAGGAGTTTTTGAGTGGGGAGGCACGAGATGTTTTGGCGGAGCAGGCGTC
GCGCTTGCTATCCACGGTGTCGGTGCAGTTTCTGCCTCAGGTAGGCCATG
CTCTTTTTTTCGCATTTCTTTCTACTTTGATCTTGAATCGTTTTCACCGG
AAACCCTTTCTTTTCACTCCCCCTCCCTCCCTCCCTCCCTCTTCCTCACC
TCCCTCCCTCCCTCCCCTCCCCTAGGTCGGCTTCCTGGTCATCGTGCAAG
CCAGTGAGAAAGTGGCCGTGGAGACCGACCCGCGCTTCCGTTTTGTCTTT
GCCGAGGGCGAGTCGGTGTACTACAAAACCCCGCGGATGGACGTGCTGGA
CGACAGCATCGGCGACTTGGCTGCGGCGATCCACGACCGAGAGGCGACGT
TGCTCCGAGCGGTGGGAGAAGAGGTAGGTGAGGGAGGGAGAGAGAGAAGG
AGGGAGTGAGGAAAGGAGGAGAGCCGAGATAGATCATCCAGCCTAACCAT
CCCTCCCCCCCTCTCTGCCGTCTTCCCCGCGCAGGTGTTGAAAGAGGAAG
TCCCACTCACAGAGGCAGTGCGTGCCTGCGCAGAGGTCGATGTGCTCCTG
TCCTTCGCCCAGGTCGCGGGGGGATTGGCCTGGGTGAAGCCCATGATCAC
GGAGGACAAGGTGGTGGTCGTCAAAGATGGAAGGCACCCCTTGCAGGTAG
GGAAGGAAGGAGGGCTTGTCTTCTCCCAAGGGGAGGTTGGGGTGGTACCA
CTCGGAGGGTGACGGAGACGACGTGGATGCAGAACCTTGAGGGTCATCGA
CGACGTCTGCGCCCCATGAGGGTACGCGTGCCCTCCTTCTTTAATTTCCT
TCCTCCAGTTATATCTTCTTTCCTACGTACTTCTTCCTTCCTCCTGCCTC
CCTCCCCGCAGGAACTGGCCGTGGAAGTCTTCATCCCCAATGATGTCTTT
CTGGTCGGCAAGGGCGGGGAGTCATCCGACAGGCAGCAGCAGGAGGGAAG
GGGAAAAAGCGAAAAGGAGAAGGCGAATGAAGAGGGGGAGGAGGGTGAGC
AGCAGCAGCAGGAGAGGCGGCAGAAGCGGCGGCCGGAGGGAGGGCGAGGC
CTGGCAGTCGTGACCGGTCCCAACTTCTCGGGGAAGAGTGTGTATATTAA
GACGGTGGGCGTGCTGACTTACCTCGCCCACCTTGGGTGCTTCCTGCCGT
GCCAGCAAGCCTTGATTGGGCTGGTGGACGGGATCTACACCAGGATTGCG
AGTGCTGAGACGGTGACAGTGCAGCAAAGTACCTTTACCATAGATTGCAG
GTAGGGGCTGGAGGGAGGGAGGGAGAGGGGAGGGAGGGAGGGAGGGTTCA
CACCCAGCAATAGTCGACTGGGTTTCCGCACCTTGTGGGCCCCCACACCC
CACCCTCCTCCTCCCCTAGTCAAATGAACGCTGTCTTTCGGAATGCCACC
CCCTCCTCCCTCATCCTAGGTACGTCACAGCAGAGGCGCAGAAGAGAGGG
AGGGAAAGGGGGCGAGAGGACGAGAGAAAAGACAACGTATTGTTCTCAGC
CCATCTCCCTCCCATCCTCTCTCCCTCTTTCCACACCCAGTGGACGAATT
TGGCAAAGGGTCCGCCGAGACCGACGGCCTGGCTCTGCTGGTCGCCTGCC
TCTCCCGCCTGCATATCCTGGGTGCCCGCACGCTTGTCACGACGCATTTT
CTCGAGCTCTTTCAACGCAAGGGCCTCCTCTCCCCTCACCTCGCCTACGA
GATATCTTACCGCATGGACGTGTTTGTACCGCCCCCCGCTCCCTCCTCTA
ACCCTCCCTCTACGAGCAGCAGTGGAAGCAGCAGCATTCAGACAGTCGTC
CCTTTGTTCAAGCTGACGAAAGGCGTCGCTACTTCTTCTGACGGTTTTTC
GTGCGCAGTTCTAGCAGGGCTTGCCTCACCTTTGGTGAAACGAGCGGAGC
ACGTCGCGCGTTGTCTCGTGGAGGGTACTCTGTCGATTCATCCCCTTCCT
CGTCCTCTTTCGTGGAGGAAGGAGGGAGGGGGGGAGAAGGAGGAGGAAAA
GGAGGCGGAGGAGGCGGGAAAGGGGGAGGAGGAGGAGGGAGGGAAGGGGG
GGCGGGAGGTATTGCGGTATAATAAGGAGGCGCAAGAGGTGCTTAGAGCG
TTTATGGCGGTGGAGGACTGGACGGAGTGTGGGGAGAAAGAGACGCAACA
GTTTGTGGAGTTGCTTCAGAAAGTGTAG

Coding sequence (CDS) from alignment at chr13:521299..525576-

>NO13G01780.1 ID=NO13G01780.1|Name=NO13G01780.1|organism=Nannochloropsis oceanica|type=CDS|length=2976bp|location=Sequence derived from alignment at chr13:521299..525576- (Nannochloropsis oceanica)
ATGACCATGCAACCGAAGAAGAAGGGGGCGTTGGGACGAACATCAACGGC
GAAAAGCAAGGAGGAACGGATGGGAGCGTACGGAAATAAATACGAGGAGG
AGGAGGAGGAGGAAAACGACGAGGAGGAGGACGAGGAGGATAGGCAGGGC
GGTGGCGCGCCTTGGTGTCGACAGAATCCTGCAGTAGGAGGAAGAGGAGA
CGATGGCGTGCCCATGGCTGTAGCGCGCCAGGCCAATAAACTTGGTTACG
CGTGCTTTGACGAGGAACGGAGCACCATTTACGTCAACGAGCTGCTGGTG
GGCTCCGACTTCCGGGAGACGGTCCAAGCCCTCAAGCTGCACCTCGGCCC
CACTTCCTTCCTCATCGATGCATACCTTCTCGCCGACGAAGACTTTTGCA
AGCTCCTGGGGTGCGCCATCTCGGAGGATCGCCCCCAATTTTACATTAAG
GTGGCCAAGGCTCGCAACTGGGATTTGCGACGTGCCATCACTCAGCTGTG
CACCTGCTTGGAAGTCCGGGAGCTTGCTGAAGCCAGCCGAACGAAAGTTG
AAGATAGGGAAGACGGGCTGATGCTCCAAAACCTTATCTCTGGAAGCCGG
GGAGGAGGGCGAGAGGGCGGAGCAGGAGCTGGAGGGTTAGATCCACGAAG
GAATTACGACCGATTGAGTTGTGTGATCGACTTTCTGGAGGAGCCGCTTT
TGGTGAAGGCTTTGGGCGCCTTGCTGATTCATTTGCAGGGGCGTGTGTTT
TCGCTTGAGATGGCGGGAAGGGTGCCGGTGGGGAGGCTGAGGAGGTTCGA
CCTTGCGGGGTTTGTGAGGCTGGACAATAACGCCTTGATGAGCTTGCAGA
TTTTTCATGAGGAGAAACATCCGAATGTGATCAATGGGAGGGGGAAGGCG
AAGGAGGGGTTTTCGTTGTTTAGTTTGTTGGATCAGACGAGGAGCAGGCC
GGGGAGGAAGGTTTTGAAGGAGTGGATGTTGCGGCCTTTGCGTTGTGTGG
AAAAGATAGAGGAGAGGCAGATGATGGTTGAATTGTTGCTGCAAGGGGAG
GCGATGGAGGTGGTGAACAATGCGGGGCGGTTGCTCGGGAGGGTGGGGGA
TGTGGGCAGGGTGCTATTGAGGGTGAAGAGGGCTGGAGCCACGGTGAACG
ATTGGCTGACGCTCGCGAATACGGCTCAACATGTTTTGCTCCTACAAAAC
TGCCTAATCGTGCTTGGCCACGTGGCAATCCGGCAGGAAAGAGTGGTGGA
GGGGGGGAAGGAGGAGGGAGGGGCTGCCCGGGTGGTGCGGGGGGTCTTGG
AACGGATTTCGGGGGAGGCAGTGAGGAGGGTGCAAGAGGTGGTTACTTGT
GTCGTTGATCTGGAGATCACGAAGGAGAGTAAGGTGGTGGCGGTGAGGAC
CGGCTGTGATGCCGAGTTGGATCGGCTTAGGGCAGAGTACGACAATTTGG
AGGAGTTTTTGAGTGGGGAGGCACGAGATGTTTTGGCGGAGCAGGCGTCG
CGCTTGCTATCCACGGTGTCGGTGCAGTTTCTGCCTCAGGTCGGCTTCCT
GGTCATCGTGCAAGCCAGTGAGAAAGTGGCCGTGGAGACCGACCCGCGCT
TCCGTTTTGTCTTTGCCGAGGGCGAGTCGGTGTACTACAAAACCCCGCGG
ATGGACGTGCTGGACGACAGCATCGGCGACTTGGCTGCGGCGATCCACGA
CCGAGAGGCGACGTTGCTCCGAGCGGTGGGAGAAGAGGTGTTGAAAGAGG
AAGTCCCACTCACAGAGGCAGTGCGTGCCTGCGCAGAGGTCGATGTGCTC
CTGTCCTTCGCCCAGGTCGCGGGGGGATTGGCCTGGGTGAAGCCCATGAT
CACGGAGGACAAGGTGGTGGTCGTCAAAGATGGAAGGCACCCCTTGCAGG
AACTGGCCGTGGAAGTCTTCATCCCCAATGATGTCTTTCTGGTCGGCAAG
GGCGGGGAGTCATCCGACAGGCAGCAGCAGGAGGGAAGGGGAAAAAGCGA
AAAGGAGAAGGCGAATGAAGAGGGGGAGGAGGGTGAGCAGCAGCAGCAGG
AGAGGCGGCAGAAGCGGCGGCCGGAGGGAGGGCGAGGCCTGGCAGTCGTG
ACCGGTCCCAACTTCTCGGGGAAGAGTGTGTATATTAAGACGGTGGGCGT
GCTGACTTACCTCGCCCACCTTGGGTGCTTCCTGCCGTGCCAGCAAGCCT
TGATTGGGCTGGTGGACGGGATCTACACCAGGATTGCGAGTGCTGAGACG
GTGACAGTGCAGCAAAGTACCTTTACCATAGATTGCAGTCAAATGAACGC
TGTCTTTCGGAATGCCACCCCCTCCTCCCTCATCCTAGTGGACGAATTTG
GCAAAGGGTCCGCCGAGACCGACGGCCTGGCTCTGCTGGTCGCCTGCCTC
TCCCGCCTGCATATCCTGGGTGCCCGCACGCTTGTCACGACGCATTTTCT
CGAGCTCTTTCAACGCAAGGGCCTCCTCTCCCCTCACCTCGCCTACGAGA
TATCTTACCGCATGGACGTGTTTGTACCGCCCCCCGCTCCCTCCTCTAAC
CCTCCCTCTACGAGCAGCAGTGGAAGCAGCAGCATTCAGACAGTCGTCCC
TTTGTTCAAGCTGACGAAAGGCGTCGCTACTTCTTCTGACGGTTTTTCGT
GCGCAGTTCTAGCAGGGCTTGCCTCACCTTTGGTGAAACGAGCGGAGCAC
GTCGCGCGTTGTCTCGTGGAGGGTACTCTGTCGATTCATCCCCTTCCTCG
TCCTCTTTCGTGGAGGAAGGAGGGAGGGGGGGAGAAGGAGGAGGAAAAGG
AGGCGGAGGAGGCGGGAAAGGGGGAGGAGGAGGAGGGAGGGAAGGGGGGG
CGGGAGGTATTGCGGTATAATAAGGAGGCGCAAGAGGTGCTTAGAGCGTT
TATGGCGGTGGAGGACTGGACGGAGTGTGGGGAGAAAGAGACGCAACAGT
TTGTGGAGTTGCTTCAGAAAGTGTAG

Synonyms

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