NO12G01080.1, NO12G01080.1 (mRNA) Nannochloropsis oceanica | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	NO12G01080.1
Unique Name	NO12G01080.1
Type	mRNA
Organism	Nannochloropsis oceanica (N. oceanica IMET1)
Sequence length	3357
Alignment location	chr12:338897..343824 -

Link to JBrowse

Properties

Mutants

Expression

No biomaterial libraries express this feature.

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
chr12	genome	chr12:338897..343824 -

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Gene prediction for N. oceanica IMET1	2017-10-24
Homology annotation for N. oceanica IMET1	2017-10-25
InterPro analysis for N. oceanica IMET1	2017-10-25

Annotated Terms

Homology

[Close]

BLAST of NO12G01080.1 vs.
Match: EWM25906.1 (RNA binding protein [Nannochloropsis gaditana])

HSP 1 Score: 151.8 bits (382), Expect = 1.300e-32
Identity = 151/389 (38.82%), Postives = 197/389 (50.64%), Query Frame = 0

Query:  602 MPDAGAASAAAAEELVEEQMECEEPTPFVAIKNLSSDFVSLDLLRLIQGCSPNYKVAPWDLLSLRRKG---RRGGGVAYLTVGNVKLAQKICDGLEGRKFDGKRLRTEFTLGKPCRDVYVAGVGGMEGWRVREVMEEWGEVLRVEGKNGDRKEKDSDFAFVNYAETGDAVAAIKAIYRCDGEIETNIDNELLSLKATFRPFKGRANPHA-GGQGGREGGESVDG--EQPGGRDGGRDRDSFGKRGGAAYSAQQSIDGADRFSRRGIEGKGGRGGGADRHGRSAGARSR-----SPVRRAAVSTGSGSARGRS-PPATSSSTAPFHHLKSNKGGR-ATSRSHDSYDSAGSHS--RSRSHSFSMGRSYSRSRSFGRPPHEQLQQNRYQPRQ 976
            +P    A   A    V +QMECEE TPFVAI+NLS D    DLLRL+Q  +P YK+   DLL LR  G   RR G VAYL++ NV LA+++ +G+ G  F+G+RL T +TLG PC DVYV GV  ME   V  +M+ WG+V+RV G  G  KE+    AFV +A   +A  A+KAI    G ++    N   S+KATFRPFKGR+  +A   +G R G E+     E+P  R  G++R     RG  A   +++ DG  R S            G  RHGR   ++ R     S VRR    + S  +   S  P    S +P   L+    GR A+    D       HS   SRS S   G      R   RP H Q  + R Q R+
Sbjct:  400 LPPRKPAGVDAGASRVAKQMECEEVTPFVAIRNLSRDLAFSDLLRLLQSHAPTYKIQAADLL-LRPSGGNGRREGFVAYLSMANVTLAERLREGVRGIVFEGQRLSTGYTLGVPCADVYVDGVEEMEEEEVAALMQRWGQVVRVTGVKGTPKERHRTSAFVTFANVQEATEAVKAINDSKGAVKIT-RNSFRSMKATFRPFKGRSFANAPDPEGTRRGREAPPARYERP-ARPLGQER-----RGPDA--EKKAFDG--RRSAFPPHASDMPSRGPFRHGREPASQGRPRAVYSSVRRTRDPSPSQDSYSHSEAPRYPPSRSPSPFLEGRPRGRPASGHGRDPPRGLPRHSGRYSRSVSPEAGPGQGAGRGGRRPLHPQDAKYRQQGRE 776

The following BLAST results are available for this feature:

BLAST of NO12G01080.1 vs.

BLAST of NO12G01080.1 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 1


Match Name	E-value	Identity	Description
EWM25906.1	1.300e-32	38.82	RNA binding protein [Nannochloropsis gaditana]	[more]

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
NO12G01080	NO12G01080	Nannochloropsis oceanica (N. oceanica IMET1)	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
NO12G01080.1	NO12G01080.1-protein	Nannochloropsis oceanica (N. oceanica IMET1)	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
NO12G01080.1.cds1	NO12G01080.1.cds1	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO12G01080.1.cds2	NO12G01080.1.cds2	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO12G01080.1.cds3	NO12G01080.1.cds3	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO12G01080.1.cds4	NO12G01080.1.cds4	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO12G01080.1.cds5	NO12G01080.1.cds5	Nannochloropsis oceanica (N. oceanica IMET1)	CDS

Sequences

The following sequences are available for this feature:

mRNA sequence
protein sequence
mRNA from alignment at chr12:338897..343824-
coding sequence from alignment at chr12:338897..343824-

mRNA sequence

>NO12G01080.1 ID=NO12G01080.1|Name=NO12G01080.1|organism=Nannochloropsis oceanica|type=mRNA|length=3357bp
ATGGCGGCCATCAGCTTGGATGCCATCTACGACATTGACCTGGCTCTTAC
CACCACGGATACGGACCCGCAACAGCACGCAACGCAGCAGCAGGAGCAAT
ACACAACGCTCCTTCAAGTCGTGCAGAATCCTTCTAATGCCGACGAACGT
GTCTTAAGCCTGGCTTGCGCCCTGTTGGGGCGTCACGCTGGCCTCGTGCC
CACTCTCGCTTCCTCTGCCGCCACCGCGGTCGTGGGTCTCTTCAACGTCT
CACCCACCCGCGAGAGCACGCCCATCACGGCCTCGCTTTCCATGGCTGCG
GGTGATGCAGCGATTTCGGAGGCGTCTCTTGCCTTGCCCACCGTCCCTAC
GTTTGCGCAGAGGGTCCGCAAGAGTGCGGCGACCGCTCTGGTCAAGCTCG
TGCAAGTGATGATTGCCTCTGCATCTTCTTCATCTACTGCCGTCGACACT
TCGGCATGTGAAACATTCCGTGGGCAACTGACATTACTGCTCGAATCTTT
GCAGGAGGGGGAGAATGATGGACTGGGAAAGGAGTTGGGCAAGGCCATGG
AGCTGTTGAAACAGCAGCTTCAGCATTTACAGCAGCAGGAGGTGAAGGAG
GGAGAGATGATTGCGTCAAAGACCACGCCGAAGAATACGATGGAGCTTGC
GTGCGACGTGTCCATTAAGACACAGAATCTCATGGTGGAGGCTGTGGAGG
GCAGTGGCAATCCGGACGAGATGCAAGCTGAGACTACAGCGACGACAGAG
GATGCAGCTGTAGCCATGTTCCCCTCGGCGGCGCCTCATGTCTGGGATCC
ATCCTCTGCTAACGAAGTGTTGGATGTGATCAAAGGAGCGGAGGAAGGAG
GGAAGAGGAAAGGGAAGGAGGATAGGAGGGAGGAGGACGATGCTGTATCG
AGTCAGCAGTCGGTGCGCATGCCCTGCGGTAGTGAGAGGGACCAGGTCCC
GGACGGCCACTTCGATGATGACGCAGGGGCGTTGATCTATCACGACCACG
GGGAAGTCACCGAGGGAAAGATAGAGGCCAAAGAGGGGAGGAAGGAGGAG
AGCCAGATTGGGGGGGGGCTGACCTGTAGCAGCAGCAGCCTTAGCAACAA
TGTGACTGTTGCTCAGAAGGAGGACGAGGGAGCGAAGGAAGGGCAAGCTT
CTTCTACCCCCCGCGGCCGCAGGAACAGCAACAACATCACGACCAAAGAG
GCGGTGGACCGAAAGGTGCAGAAATCTGATCGTAGCCCTTCCTCTTCCTC
GTCCTCCTCCTTCTCCCGCTCTTCCCCTCGACGTGCTTCCGCCTCCCCCA
TGACCAAGGCCCGCAACAGCCGCTCTCGCTCTCGCTCTCGCTCCTGCTCC
ATGTCACGCTCGCGTAGCCGTAGCATGAGTTGGGGGAGCAGCAATAGCAA
TGGCAGCAGGAGTTGGAGCAGGAGCAGGAGCAGGAGCCTCAGCAGTAGCC
GTGGTAAGGACGATCCGAGGGAATACGGGAAGAAGCGTTCCTCTTACGGC
AGCACCAGGAACAGCAACGGCAGCGGCAGGGGGAACAATGGAAAAAGAGA
GGATTCGAACGGGAGGGCGCTGAAGAAGACATACGACGACAATGTCGAAA
CCGTTGAGATACTCAAGCAGACGTTGGCCACGTTACTGGAGCTAGACGGA
AGCATGAGTCCCGAACGTGGGTTCTATCCTGATGACCTTCGCGTCAAGCT
TTCCTTGTCCCCTCCGCTGTGGGAGGAAATATACGACGGAGCCAAGATTG
TGCCCAATCGATCCAACCGCCTTTATCGCTCTCGTGTGCGGAGGTTGATC
TGGATGCCTGATGCTGGTGCTGCTAGTGCTGCTGCTGCTGAGGAGCTCGT
GGAGGAGCAGATGGAGTGCGAGGAGCCAACGCCGTTTGTGGCGATCAAGA
ACTTGAGCAGCGACTTTGTCTCCCTCGACCTTCTCCGTCTGATTCAAGGC
TGCTCCCCCAACTATAAGGTGGCTCCTTGGGACCTCCTTTCCCTTCGTCG
CAAAGGAAGAAGGGGAGGAGGGGTGGCGTACCTGACGGTGGGGAATGTGA
AGCTAGCACAGAAAATATGTGATGGACTGGAGGGGAGGAAGTTTGATGGG
AAGAGGCTCAGGACGGAATTTACTTTAGGGAAGCCTTGTAGGGATGTGTA
TGTGGCGGGGGTAGGAGGGATGGAGGGATGGAGGGTGAGGGAGGTGATGG
AGGAATGGGGGGAGGTCTTGAGGGTGGAAGGGAAGAATGGCGATCGCAAA
GAAAAAGATTCAGACTTTGCCTTTGTCAACTACGCCGAGACCGGGGACGC
CGTGGCTGCCATCAAAGCCATCTACCGGTGCGATGGGGAGATCGAAACTA
ACATCGACAACGAGCTTTTGTCGCTCAAGGCGACTTTCCGTCCCTTCAAA
GGACGGGCCAATCCGCATGCAGGCGGCCAAGGTGGGAGGGAGGGAGGGGA
GAGTGTCGACGGGGAACAGCCGGGAGGGAGGGATGGAGGAAGGGATCGGG
ACTCCTTTGGAAAGCGGGGGGGGGCGGCTTACTCAGCCCAGCAGTCGATA
GATGGCGCGGACCGTTTCTCCCGTCGAGGGATTGAGGGAAAAGGAGGACG
AGGAGGAGGAGCAGATCGACACGGTCGCTCTGCTGGCGCTCGTTCTCGTT
CTCCTGTGCGTCGTGCTGCTGTGTCCACTGGCAGCGGTAGCGCGCGGGGC
CGCTCTCCCCCGGCCACCTCCAGTTCCACTGCCCCTTTCCACCACCTCAA
GAGCAATAAGGGAGGGCGTGCTACGTCTCGCTCCCACGACTCCTACGACT
CCGCCGGCAGCCACAGCCGCAGCCGCTCCCACTCTTTCAGCATGGGGCGA
AGCTATTCTCGCTCGCGCTCCTTCGGTCGTCCCCCCCACGAGCAGCTGCA
GCAGAACCGGTACCAACCCCGACAGCAGCAGCAGCCGCGTTTCCGCCGTT
ACTCCCGTTCTAATTCTCCCGGCCGGCTTGGGGGGGATATGGGCGGGCGT
CGGGCATCGGTGCGTTATCTCGAGCAGCAGCAGCGGCAGCATCAGAAGGG
AGGAGGGACGTTTAATGGTGGGCCCAGCAGCAGCAGCAGTAGCAGTAGCG
GCAAGCACCACAAGCCTTCCCACCAGTCACGCAAGCGAAATCGCTCCATG
GATACCCGCGGTGGCAACGAGCAGCAGCAGCAGCAGCAGCAGCAGCACTA
CCACTACTCGAACAACGGCGACGGCAATAACTGGAATGGGGGAAAGGGAA
GGAAGGACGGAGGGGAGCCGCGGAAGTACCAGCGGCACGCGAGAGATAGC
CCGATGCGACGGGTTTCCGTGACGGCGGCGGTGGCGGGAGCTCACACAAA
CCGCTAG

protein sequence of NO12G01080.1

>NO12G01080.1-protein ID=NO12G01080.1-protein|Name=NO12G01080.1|organism=Nannochloropsis oceanica|type=polypeptide|length=1119bp
MAAISLDAIYDIDLALTTTDTDPQQHATQQQEQYTTLLQVVQNPSNADER
VLSLACALLGRHAGLVPTLASSAATAVVGLFNVSPTRESTPITASLSMAA
GDAAISEASLALPTVPTFAQRVRKSAATALVKLVQVMIASASSSSTAVDT
SACETFRGQLTLLLESLQEGENDGLGKELGKAMELLKQQLQHLQQQEVKE
GEMIASKTTPKNTMELACDVSIKTQNLMVEAVEGSGNPDEMQAETTATTE
DAAVAMFPSAAPHVWDPSSANEVLDVIKGAEEGGKRKGKEDRREEDDAVS
SQQSVRMPCGSERDQVPDGHFDDDAGALIYHDHGEVTEGKIEAKEGRKEE
SQIGGGLTCSSSSLSNNVTVAQKEDEGAKEGQASSTPRGRRNSNNITTKE
AVDRKVQKSDRSPSSSSSSSFSRSSPRRASASPMTKARNSRSRSRSRSCS
MSRSRSRSMSWGSSNSNGSRSWSRSRSRSLSSSRGKDDPREYGKKRSSYG
STRNSNGSGRGNNGKREDSNGRALKKTYDDNVETVEILKQTLATLLELDG
SMSPERGFYPDDLRVKLSLSPPLWEEIYDGAKIVPNRSNRLYRSRVRRLI
WMPDAGAASAAAAEELVEEQMECEEPTPFVAIKNLSSDFVSLDLLRLIQG
CSPNYKVAPWDLLSLRRKGRRGGGVAYLTVGNVKLAQKICDGLEGRKFDG
KRLRTEFTLGKPCRDVYVAGVGGMEGWRVREVMEEWGEVLRVEGKNGDRK
EKDSDFAFVNYAETGDAVAAIKAIYRCDGEIETNIDNELLSLKATFRPFK
GRANPHAGGQGGREGGESVDGEQPGGRDGGRDRDSFGKRGGAAYSAQQSI
DGADRFSRRGIEGKGGRGGGADRHGRSAGARSRSPVRRAAVSTGSGSARG
RSPPATSSSTAPFHHLKSNKGGRATSRSHDSYDSAGSHSRSRSHSFSMGR
SYSRSRSFGRPPHEQLQQNRYQPRQQQQPRFRRYSRSNSPGRLGGDMGGR
RASVRYLEQQQRQHQKGGGTFNGGPSSSSSSSSGKHHKPSHQSRKRNRSM
DTRGGNEQQQQQQQQHYHYSNNGDGNNWNGGKGRKDGGEPRKYQRHARDS
PMRRVSVTAAVAGAHTNR*

mRNA from alignment at chr12:338897..343824-

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>NO12G01080.1 ID=NO12G01080.1|Name=NO12G01080.1|organism=Nannochloropsis oceanica|type=mRNA|length=4928bp|location=Sequence derived from alignment at chr12:338897..343824- (Nannochloropsis oceanica)
ATGGCGGCCATCAGCTTGGATGCCATCTACGACATTGACCTGGCTCTTAC
CACCACGGGTACGTGACTTTCTGGTGTCCTTGCTTTCCCCCCATCCCCCT
CCACCCGCGCTCACCCCTGACATCTTCCCATTTCAAACCCGCCACAGATA
CGGACCCGCAACAGCACGCAACGCAGCAGCAGGAGCAATACACAACGCTC
CTTCAAGTCGTGCAGAATCCTTCTAATGCCGACGAACGTGTCTTAAGCCT
GGCTTGCGCCCTGTTGGGGCGTCACGCTGGCCTCGTGCCCACTCTCGCTT
CCTCTGCCGCCACCGCGGTCGTGGGTCTCTTCAACGTCTCACCCACCCGC
GAGAGCACGCCCATCACGGCCTCGCTTTCCATGGCTGCGGGTGATGCAGC
GATTTCGGAGGCGTCTCTTGCCTTGCCCACCGTCCCTACGTTTGCGCAGA
GGGTCCGCAAGAGTGCGGCGACCGCTCTGGTCAAGCTCGTGCAAGTGATG
ATTGCCTCTGCATCTTCTTCATCTACTGCCGTCGACACTTCGGCATGTGA
AACATTCCGTGGGCAACTGACATTACTGCTCGAATCTTTGCAGGAGGGGG
AGAATGATGGACTGGGAAAGGAGTTGGGCAAGGCCATGGAGCTGTTGAAA
CAGCAGCTTCAGCATTTACAGCAGCAGGAGGTGAAGGAGGGAGAGATGAT
TGCGTCAAAGACCACGCCGAAGAATACGATGGAGCTTGCGTGCGACGTGT
CCATTAAGACACAGAATCTCATGGTGGAGGCTGTGGAGGGCAGTGGCAAT
CCGGACGAGATGCAAGCTGAGACTACAGCGACGACAGAGGATGCAGCTGT
AGCCATGTTCCCCTCGGCGGCGCCTCATGTCTGGGATCCATCCTCTGCTA
ACGAAGTGTTGGATGTGATCAAAGGAGCGGAGGAAGGAGGGAAGAGGAAA
GGGAAGGAGGATAGGAGGGAGGAGGACGATGCTGTATCGAGTCAGCAGTC
GGTGCGCATGCCCTGCGGTAGTGAGAGGGACCAGGTCCCGGACGGCCACT
TCGATGATGACGCAGGGGCGTTGATCTATCACGACCACGGGGAAGTCACC
GAGGGAAAGATAGAGGCCAAAGAGGGGAGGAAGGAGGAGAGCCAGATTGG
GGGGGGGCTGACCTGTAGCAGCAGCAGCCTTAGCAACAATGTGACTGTTG
CTCAGAAGGAGGACGAGGGAGCGAAGGAAGGGCAAGCTTCTTCTACCCCC
CGCGGCCGCAGGAACAGCAACAACATCACGACCAAAGAGGCGGTGGACCG
AAAGGTGCAGAAATCTGATCGTAGCCCTTCCTCTTCCTCGTCCTCCTCCT
TCTCCCGCTCTTCCCCTCGACGTGCTTCCGCCTCCCCCATGACCAAGGCC
CGCAACAGCCGCTCTCGCTCTCGCTCTCGCTCCTGCTCCATGTCACGCTC
GCGTAGCCGTAGCATGAGTTGGGGGAGCAGCAATAGCAATGGCAGCAGGA
GTTGGAGCAGGAGCAGGAGCAGGAGCCTCAGCAGTAGCCGTGGTAAGGAC
GATCCGAGGGAATACGGGAAGAAGCGTTCCTCTTACGGCAGCACCAGGAA
CAGCAACGGCAGCGGCAGGGGGAACAATGGAAAAAGAGAGGATTCGAACG
GGAGGGCGCTGAAGAAGACATACGACGACAATGTCGAAACCGTTGAGATA
CTCAAGCAGACGTTGGCCACGTTACTGGAGCTAGACGGAAGCATGAGTCC
CGAACGTGGGTTCTATCCTGATGACCTTCGCGTCAAGCTTTCCTTGTCCC
CTCCGCTGTGGGAGGAAATATACGACGGAGCCAAGATTGTGCCCAATCGA
TCCAACCGCCTTTATCGCTCTCGTGTGCGGAGGTTGATCTGGTATGTGGA
GGCCAGGCTGGGGTTGCCCTCGAGTCTCAGAGCGCTTCGACCGGGGGAGG
GGCTGGAGGAAAAGAGAATGGCGGGGGAGGGAGGGGGAGGGGGTACGGGA
GGAGGAATGGAGAGAAGAAGGAGGGTTATGAGCGGTTGGGAGGCAGGAGG
GGCGACGAGAGGGCCAGGATGCCTGATGCTGGTGCTGCTAGTGCTGCTGC
TGCTGAGGAGCTCGTGGAGGAGCAGATGGAGTGCGAGGAGCCAACGCCGT
TTGTGGCGATCAAGAACTTGAGCAGGTGCGGACATTTCTTGGATTTTTCT
TATTCTTCTCCTTCTTTTCTTTTATCTTTGGCTGGTGCGGCGTGATGTGG
TGTCGGTAAAGTATGCTTTCTGGCTCTGGATAGAGGACATTGGCACGGGC
ATGCGCATGCGTGTCTGTCCGTCCTGCTTTTCCCTTTTGGTCTTTGATTT
TGACAGGCCTGCACGGAAGAATCGAATGTGGACACACTGAAATTGGGCGT
GGACACATTGACGAGTTGGCAAGTGGGCCCTGTTTGGAGTCCTTGACTTT
TTTGTTGATATGTGGTTTTGAGCTGTGAGCGGAGAGAACATATTTGGGTC
TACGTTTCCGCTGCAGTTGTCAGATAGTCTTTTTTTTGACTCGTCGACAG
CCACAAAGTTGCACCCCCTTGGGATTCGATCGATATGTTAAAGGACTTTG
GTCGACGGCCACACTAAGAGATTTGTTTTGGTCAGATGGTTGTATTACTG
TGCCGCATCGTACCAGTTGTGCAACATGGATTAAGTAGTCGGTCGAACTT
AATTGGAAATCTTTTGATTTTGACCTTTTGACGTGTTAGCGTACATGCCA
TTTAGTTGCTGCTGCACTAGCAGCAGCAACAGCTGCGGAGATTTAAGTCC
CATCCTGCACTTGCTACTTCTCTTAGCTCCTCTGATTCGATGCGAGCGAG
AGAGTATTTAGAGACTCTTGATTCGAGAGAGTTACGATTCGAGATAGCAG
AGCGCACGCACTTTGCATGGCTTGGTGATGGACATGCCTTGCCCGCCCTT
CATAAGCAAGCAAAGCAGTATATCATTTATATTCAAGCAATTGCCCCTCC
TTTCGACCTACCTTCCACAGCCGGAAGTGGTGGGACATTGACGAGGACCA
AGAGAGAGAAAATAGAGAGTTAGATAGAGGTAGCGAGAATGAGAATTGGA
CTCTCACTTCACTTGCATTCTCTTTCTTTTGATTACTCTCTTACCTACTC
TTACCTTCACGCCTTGAGAATAATGTATGCCTCTCCCATGACCCTCTCCC
CCTTCCCCTCTCATCCCTCTATATCTGTTTTTACGACATTGGACCGAAAA
AAAAAACAATCCCAACTCTCACACCCGTCCCTTCCATCCCAACCCCACCG
TCTCCCTCCATCCGTGCAGCGACTTTGTCTCCCTCGACCTTCTCCGTCTG
ATTCAAGGCTGCTCCCCCAACTATAAGGTGGCTCCTTGGGACCTCCTTTC
CCTTCGTCGCAAAGGAAGAAGGGGAGGAGGGGTGGCGTACCTGACGGTGG
GGAATGTGAAGCTAGCACAGAAAATATGTGATGGACTGGAGGGGAGGAAG
TTTGATGGGAAGAGGCTCAGGACGGAATTTACTTTAGGGAAGCCTTGTAG
GGATGTGTATGTGGCGGGGGTAGGAGGGATGGAGGGATGGAGGGTGAGGG
AGGTGATGGAGGAATGGGGGGAGGTCTTGAGGGTGGAAGGGAAGAATGGC
GATCGCAAAGGTGAGAAGCGCGGAAAGGAGTGAGGAATAGATGGCGATGT
GATCGAGTGTATGTCTGTGTGCATGATGAATCCCCCCCCCTCTCTCTTCT
CCTGTTGTCTTACTCATGGACCTTTCTCCCTCCACCCGTTCCCCCCTCTC
CTCCCTCTCTCTCAACCCCTAGAAAAAGATTCAGACTTTGCCTTTGTCAA
CTACGCCGAGACCGGGGACGCCGTGGCTGCCATCAAAGCCATCTACCGGT
GCGATGGGGAGATCGAAACTAACATCGACAACGAGCTTTTGTCGCTCAAG
GCGACTTTCCGTCCCTTCAAAGGACGGGCCAATCCGCATGCAGGCGGCCA
AGGTGGGAGGGAGGGAGGGGAGAGTGTCGACGGGGAACAGCCGGGAGGGA
GGGATGGAGGAAGGGATCGGGACTCCTTTGGAAAGCGGGGGGGGGCGGCT
TACTCAGCCCAGCAGTCGATAGATGGCGCGGACCGTTTCTCCCGTCGAGG
GATTGAGGGAAAAGGAGGACGAGGAGGAGGAGCAGATCGACACGGTCGCT
CTGCTGGCGCTCGTTCTCGTTCTCCTGTGCGTCGTGCTGCTGTGTCCACT
GGCAGCGGTAGCGCGCGGGGCCGCTCTCCCCCGGCCACCTCCAGTTCCAC
TGCCCCTTTCCACCACCTCAAGAGCAATAAGGGAGGGCGTGCTACGTCTC
GCTCCCACGACTCCTACGACTCCGCCGGCAGCCACAGCCGCAGCCGCTCC
CACTCTTTCAGCATGGGGCGAAGCTATTCTCGCTCGCGCTCCTTCGGTCG
TCCCCCCCACGAGCAGCTGCAGCAGAACCGGTACCAACCCCGACAGCAGC
AGCAGCCGCGTTTCCGCCGTTACTCCCGTTCTAATTCTCCCGGCCGGCTT
GGGGGGGATATGGGCGGGCGTCGGGCATCGGTGCGTTATCTCGAGCAGCA
GCAGCGGCAGCATCAGAAGGGAGGAGGGACGTTTAATGGTGGGCCCAGCA
GCAGCAGCAGTAGCAGTAGCGGCAAGCACCACAAGCCTTCCCACCAGTCA
CGCAAGCGAAATCGCTCCATGGATACCCGCGGTGGCAACGAGCAGCAGCA
GCAGCAGCAGCAGCAGCACTACCACTACTCGAACAACGGCGACGGCAATA
ACTGGAATGGGGGAAAGGGAAGGAAGGACGGAGGGGAGCCGCGGAAGTAC
CAGCGGCACGCGAGAGATAGCCCGATGCGACGGGTTTCCGTGACGGCGGC
GGTGGCGGGAGCTCACACAAACCGCTAG

Coding sequence (CDS) from alignment at chr12:338897..343824-

>NO12G01080.1 ID=NO12G01080.1|Name=NO12G01080.1|organism=Nannochloropsis oceanica|type=CDS|length=3357bp|location=Sequence derived from alignment at chr12:338897..343824- (Nannochloropsis oceanica)
ATGGCGGCCATCAGCTTGGATGCCATCTACGACATTGACCTGGCTCTTAC
CACCACGGATACGGACCCGCAACAGCACGCAACGCAGCAGCAGGAGCAAT
ACACAACGCTCCTTCAAGTCGTGCAGAATCCTTCTAATGCCGACGAACGT
GTCTTAAGCCTGGCTTGCGCCCTGTTGGGGCGTCACGCTGGCCTCGTGCC
CACTCTCGCTTCCTCTGCCGCCACCGCGGTCGTGGGTCTCTTCAACGTCT
CACCCACCCGCGAGAGCACGCCCATCACGGCCTCGCTTTCCATGGCTGCG
GGTGATGCAGCGATTTCGGAGGCGTCTCTTGCCTTGCCCACCGTCCCTAC
GTTTGCGCAGAGGGTCCGCAAGAGTGCGGCGACCGCTCTGGTCAAGCTCG
TGCAAGTGATGATTGCCTCTGCATCTTCTTCATCTACTGCCGTCGACACT
TCGGCATGTGAAACATTCCGTGGGCAACTGACATTACTGCTCGAATCTTT
GCAGGAGGGGGAGAATGATGGACTGGGAAAGGAGTTGGGCAAGGCCATGG
AGCTGTTGAAACAGCAGCTTCAGCATTTACAGCAGCAGGAGGTGAAGGAG
GGAGAGATGATTGCGTCAAAGACCACGCCGAAGAATACGATGGAGCTTGC
GTGCGACGTGTCCATTAAGACACAGAATCTCATGGTGGAGGCTGTGGAGG
GCAGTGGCAATCCGGACGAGATGCAAGCTGAGACTACAGCGACGACAGAG
GATGCAGCTGTAGCCATGTTCCCCTCGGCGGCGCCTCATGTCTGGGATCC
ATCCTCTGCTAACGAAGTGTTGGATGTGATCAAAGGAGCGGAGGAAGGAG
GGAAGAGGAAAGGGAAGGAGGATAGGAGGGAGGAGGACGATGCTGTATCG
AGTCAGCAGTCGGTGCGCATGCCCTGCGGTAGTGAGAGGGACCAGGTCCC
GGACGGCCACTTCGATGATGACGCAGGGGCGTTGATCTATCACGACCACG
GGGAAGTCACCGAGGGAAAGATAGAGGCCAAAGAGGGGAGGAAGGAGGAG
AGCCAGATTGGGGGGGGGCTGACCTGTAGCAGCAGCAGCCTTAGCAACAA
TGTGACTGTTGCTCAGAAGGAGGACGAGGGAGCGAAGGAAGGGCAAGCTT
CTTCTACCCCCCGCGGCCGCAGGAACAGCAACAACATCACGACCAAAGAG
GCGGTGGACCGAAAGGTGCAGAAATCTGATCGTAGCCCTTCCTCTTCCTC
GTCCTCCTCCTTCTCCCGCTCTTCCCCTCGACGTGCTTCCGCCTCCCCCA
TGACCAAGGCCCGCAACAGCCGCTCTCGCTCTCGCTCTCGCTCCTGCTCC
ATGTCACGCTCGCGTAGCCGTAGCATGAGTTGGGGGAGCAGCAATAGCAA
TGGCAGCAGGAGTTGGAGCAGGAGCAGGAGCAGGAGCCTCAGCAGTAGCC
GTGGTAAGGACGATCCGAGGGAATACGGGAAGAAGCGTTCCTCTTACGGC
AGCACCAGGAACAGCAACGGCAGCGGCAGGGGGAACAATGGAAAAAGAGA
GGATTCGAACGGGAGGGCGCTGAAGAAGACATACGACGACAATGTCGAAA
CCGTTGAGATACTCAAGCAGACGTTGGCCACGTTACTGGAGCTAGACGGA
AGCATGAGTCCCGAACGTGGGTTCTATCCTGATGACCTTCGCGTCAAGCT
TTCCTTGTCCCCTCCGCTGTGGGAGGAAATATACGACGGAGCCAAGATTG
TGCCCAATCGATCCAACCGCCTTTATCGCTCTCGTGTGCGGAGGTTGATC
TGGATGCCTGATGCTGGTGCTGCTAGTGCTGCTGCTGCTGAGGAGCTCGT
GGAGGAGCAGATGGAGTGCGAGGAGCCAACGCCGTTTGTGGCGATCAAGA
ACTTGAGCAGCGACTTTGTCTCCCTCGACCTTCTCCGTCTGATTCAAGGC
TGCTCCCCCAACTATAAGGTGGCTCCTTGGGACCTCCTTTCCCTTCGTCG
CAAAGGAAGAAGGGGAGGAGGGGTGGCGTACCTGACGGTGGGGAATGTGA
AGCTAGCACAGAAAATATGTGATGGACTGGAGGGGAGGAAGTTTGATGGG
AAGAGGCTCAGGACGGAATTTACTTTAGGGAAGCCTTGTAGGGATGTGTA
TGTGGCGGGGGTAGGAGGGATGGAGGGATGGAGGGTGAGGGAGGTGATGG
AGGAATGGGGGGAGGTCTTGAGGGTGGAAGGGAAGAATGGCGATCGCAAA
GAAAAAGATTCAGACTTTGCCTTTGTCAACTACGCCGAGACCGGGGACGC
CGTGGCTGCCATCAAAGCCATCTACCGGTGCGATGGGGAGATCGAAACTA
ACATCGACAACGAGCTTTTGTCGCTCAAGGCGACTTTCCGTCCCTTCAAA
GGACGGGCCAATCCGCATGCAGGCGGCCAAGGTGGGAGGGAGGGAGGGGA
GAGTGTCGACGGGGAACAGCCGGGAGGGAGGGATGGAGGAAGGGATCGGG
ACTCCTTTGGAAAGCGGGGGGGGGCGGCTTACTCAGCCCAGCAGTCGATA
GATGGCGCGGACCGTTTCTCCCGTCGAGGGATTGAGGGAAAAGGAGGACG
AGGAGGAGGAGCAGATCGACACGGTCGCTCTGCTGGCGCTCGTTCTCGTT
CTCCTGTGCGTCGTGCTGCTGTGTCCACTGGCAGCGGTAGCGCGCGGGGC
CGCTCTCCCCCGGCCACCTCCAGTTCCACTGCCCCTTTCCACCACCTCAA
GAGCAATAAGGGAGGGCGTGCTACGTCTCGCTCCCACGACTCCTACGACT
CCGCCGGCAGCCACAGCCGCAGCCGCTCCCACTCTTTCAGCATGGGGCGA
AGCTATTCTCGCTCGCGCTCCTTCGGTCGTCCCCCCCACGAGCAGCTGCA
GCAGAACCGGTACCAACCCCGACAGCAGCAGCAGCCGCGTTTCCGCCGTT
ACTCCCGTTCTAATTCTCCCGGCCGGCTTGGGGGGGATATGGGCGGGCGT
CGGGCATCGGTGCGTTATCTCGAGCAGCAGCAGCGGCAGCATCAGAAGGG
AGGAGGGACGTTTAATGGTGGGCCCAGCAGCAGCAGCAGTAGCAGTAGCG
GCAAGCACCACAAGCCTTCCCACCAGTCACGCAAGCGAAATCGCTCCATG
GATACCCGCGGTGGCAACGAGCAGCAGCAGCAGCAGCAGCAGCAGCACTA
CCACTACTCGAACAACGGCGACGGCAATAACTGGAATGGGGGAAAGGGAA
GGAAGGACGGAGGGGAGCCGCGGAAGTACCAGCGGCACGCGAGAGATAGC
CCGATGCGACGGGTTTCCGTGACGGCGGCGGTGGCGGGAGCTCACACAAA
CCGCTAG

Synonyms

Publications