NO12G00360.1, NO12G00360.1 (mRNA) Nannochloropsis oceanica | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	NO12G00360.1
Unique Name	NO12G00360.1
Type	mRNA
Organism	Nannochloropsis oceanica (N. oceanica IMET1)
Sequence length	4111
Alignment location	chr12:124363..130633 +

Link to JBrowse

Properties

Mutants

Expression

No biomaterial libraries express this feature.

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
chr12	genome	chr12:124363..130633 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Gene prediction for N. oceanica IMET1	2017-10-24
Homology annotation for N. oceanica IMET1	2017-10-25
InterPro analysis for N. oceanica IMET1	2017-10-25

Annotated Terms

Homology

[Close]

BLAST of NO12G00360.1 vs.
Match: EWM25991.1 (hypothetical protein Naga_100151g9 [Nannochloropsis gaditana])

HSP 1 Score: 564.7 bits (1454), Expect = 4.000e-157
Identity = 384/689 (55.73%), Postives = 467/689 (67.78%), Query Frame = 0

Query:   31 ESPPLWEREEADSVSSVNEQEP----LVDLTYASPATFNVGKSITPSIKSEYYDEEEEEEEDGGRG-GDGVGKGSNMHSP-------TPSSVASSSTSGRRGARKAAAAAATALRNTLSRIGSPHTPSSSVGASPSSPSSSLASSTSSRR-SLSFMPSRKGKREGERGEGKK-GERKGRRVVEEEEEEEEEKKEVEVEEEEEVEEEGEDEEEEFESLATQSPSPKMTAIMGTRIGRGGGRGGGGGGGVRSLRMMMDEQEINPAEVESALDAVNAAAACMRYQGGRGNEDEGEGEEEEAGVQLVFPEAVAESITSVLQKLDDGGVINEVTDFCLNVAALEPPFSRNHMPPAFFMDILHPSRPPPGDEDEEEGEDGGGGREDEEGRFRRCIQRMELVKKCAKEEREDGAAFRKAVESVERRAQDYKEEIKNRQMHYDEQVESKAAEVEENDTRLHEERASLRTLLEGEFNFDEELRARLGEGFDAGEDAHLSLEASKMHLENLQELQALYSTIDCRLDAYLSFVLEHVARLQEQVEPMLRQRRTERIRKLYRVRRTLHNLFSAATASKNEVLQSIEADKAALQDELAKLTRKYTNAGPTIQADMAALREKVKEMSEQWQLHRQALEDMRTEHTEAKIDISLLLEDEVREAHATEEAELEEDDEMGEDEGEAGKEGGQKAHAPSR-MFCSIM 705
            ESPP WE    D+VS   +QE     L DL     A+    ++ +P +K+E  D+++++E  G R  GDG   G ++ SP       +PSS +S +T+ +R  R  A A A+A+ N+LSR+ +P TP+SS  ASPS PSSSL+SSTS R  S SF  +R G  +G  GEGK  G  +G                          EEGE  EEE ES+ATQSP+PK         G+ GGRG     GVR+LR++ +EQEINP+EVESALDAVN AA  M +Q G+    EG GE   AGV  VFP  +AE ITS LQ+LDDGGVINEVTDFCLNVAALEPP SR +MP AFF D+L           E   E+ GGG + E   FR CI RME VK CAK EREDG AFR+AVESVE+RA +YKEEI+NR+MHY EQVE+KA EVEEN   LH+ER   R+++E +F FDE LR +LGE FDAG DA+++L+AS+ HLENLQELQALY  +D RL+AYLS+VL+HVA L++ +EPML++R+TER+RKLYRVRRTL NLFSAA  S N +LQSIEADK ALQD+LAKL RKYTNAGPT+QADM  LREKVKEM+EQWQLHRQ LE+MR+EHTEAKIDI+LLLEDE REA      ELEED E GEDE +   E G K    S   FC +M
Sbjct:   40 ESPPRWEPRHMDTVSLGEKQEGGDANLPDLCPLPDASH---QTTSPLVKTELPDDDKDDENKGKRDTGDGTDAGGDLCSPAFSSAASSPSSFSSLTTASKR--RSKAVARASAVWNSLSRLSTPRTPASSAMASPS-PSSSLSSSTSRRSCSASFYAARSGGGQGGSGEGKTTGMNEG--------------------------EEGE--EEELESVATQSPAPK---------GKMGGRGIREDTGVRTLRLV-EEQEINPSEVESALDAVNVAAVYMGFQKGKEEGKEGRGE---AGV--VFPIEIAEGITSALQRLDDGGVINEVTDFCLNVAALEPPRSRTYMPAAFFSDVL-----------EATPEEEGGGFKREGDIFRHCICRMEEVKNCAKNEREDGIAFREAVESVEKRALEYKEEIENREMHYAEQVEAKAEEVEENTKLLHKERVVFRSMVEEDFQFDENLREKLGEVFDAGVDANVALQASQSHLENLQELQALYGMVDARLEAYLSYVLDHVAALRKGMEPMLKERQTERVRKLYRVRRTLQNLFSAAHESTNYLLQSIEADKVALQDDLAKLQRKYTNAGPTLQADMTTLREKVKEMTEQWQLHRQELEEMRSEHTEAKIDIALLLEDEAREALELGVMELEEDKEKGEDERKESDEAGAKGTKKSMWTFCVVM 668

The following BLAST results are available for this feature:

BLAST of NO12G00360.1 vs.

BLAST of NO12G00360.1 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 1


Match Name	E-value	Identity	Description
EWM25991.1	4.000e-157	55.73	hypothetical protein Naga_100151g9 [Nannochloropsi...	[more]

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
NO12G00360	NO12G00360	Nannochloropsis oceanica (N. oceanica IMET1)	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
NO12G00360.1	NO12G00360.1-protein	Nannochloropsis oceanica (N. oceanica IMET1)	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
NO12G00360.1.cds1	NO12G00360.1.cds1	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO12G00360.1.cds2	NO12G00360.1.cds2	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO12G00360.1.cds3	NO12G00360.1.cds3	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO12G00360.1.cds4	NO12G00360.1.cds4	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO12G00360.1.cds5	NO12G00360.1.cds5	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO12G00360.1.cds6	NO12G00360.1.cds6	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO12G00360.1.cds7	NO12G00360.1.cds7	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO12G00360.1.cds8	NO12G00360.1.cds8	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO12G00360.1.cds9	NO12G00360.1.cds9	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO12G00360.1.cds10	NO12G00360.1.cds10	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO12G00360.1.cds11	NO12G00360.1.cds11	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO12G00360.1.cds12	NO12G00360.1.cds12	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO12G00360.1.cds13	NO12G00360.1.cds13	Nannochloropsis oceanica (N. oceanica IMET1)	CDS

Sequences

The following sequences are available for this feature:

mRNA sequence
protein sequence
mRNA from alignment at chr12:124363..130633+
coding sequence from alignment at chr12:124363..130633+

mRNA sequence

>NO12G00360.1 ID=NO12G00360.1|Name=NO12G00360.1|organism=Nannochloropsis oceanica|type=mRNA|length=4111bp
CTCCATCATCTAGGCCGTGTCTGTCCGTGTATGCGTGCTCAGCGTTGGTG
GGTTTCGTACGGGAAAAGGGACTATGGTCACATGATACCACTCGTGTGAG
GATTGGATGATGCTCGAGTGCGGCGCAGGATGAGAAGCGCCTCCTTTCGC
CACGGGCGTAGGTAGCCAACACCGCTTACATAAGATGTACGATCACAACT
ATGTTATGCGTGTGGTAGTACTGGGAAGTGGTGGCCATGTGCGAATGGGA
AGCAAGCAAGTCAGGCAAACACTCTCTGCGGCTTCCCTGACAACTTGCCG
CATCTAATTTTACCCTCCCAGCTACACAATTATACTCTCAGACAGACTGA
AAAGGGTGGCCTGCAGCGTTTCATTTGACAGGGGATAATATTAATCTTGC
GTGCAGTCAGGATGCCTTAAATGCGCCTGAAAAGAGACGAGACATGACGG
GAAGCGGCGCCCAAGTGCCTCTCGCGCCCTTGCCGCCCTTTCGATTTTTG
AACACTCGCTACAGCAACGTTGATGATACACACAACCACACAAGCCTCAC
TACCCATCAACTTATAAAAATTGCGTGTGTAAAAAGCTCACATGCAGCCA
CTGCGCATTGAGTTCAGTCTTTTTCTTCAGCCTCTCTCGTACTCATCACC
ATCGCCATCATCACCACCACCACCCTGCCACTACCCTGCCTGCCCCTGGT
CGTTGGTAGAGCAGCAGGAACAGCAAAATTACAGCTCGCCCACCAACGCC
GCAAAGTTCCGAGTCTAAGTCCAGATCCATGACGACTGCTGTCCTATGGC
CACAAAATTTGCGTCGTCATTGTCTTCACGCATCCTCATCGGCTCGCTTC
ATTCTCTTCACTCACAGGCCGAAACGAGCCCCACACCGCCAGTACCACCA
ACTTTACCACAAGCATGCCAAAGGCCAAGGCCGCCACCAGCAGCACGGCA
CGAGGCCGCACCACCCGTACCCGTGCCAGCACCAACAAAGAGACAAAGCT
GCTTGAGAGCCCGCCCTTATGGGAACGTGAGGAGGCCGATTCGGTCTCGA
GTGTGAATGAACAGGAGCCACTTGTTGATCTGACATACGCTTCCCCCGCT
ACTTTTAATGTGGGAAAGAGCATCACCCCCTCCATCAAGAGCGAATATTA
CGATGAGGAGGAAGAGGAGGAGGAGGACGGAGGAAGGGGAGGAGATGGGG
TTGGGAAGGGAAGTAATATGCACTCGCCGACCCCTTCCTCGGTCGCTTCC
TCCTCAACGTCAGGGAGAAGGGGGGCGAGGAAGGCCGCTGCTGCTGCTGC
TACTGCTCTTCGTAATACACTCAGCAGGATAGGGAGCCCTCACACTCCCT
CTTCCTCTGTTGGTGCTTCCCCTTCCTCCCCCTCGTCCTCCCTTGCGTCC
TCGACCTCCTCCCGGCGGTCGTTGTCGTTCATGCCCTCGAGGAAGGGGAA
GAGAGAAGGGGAGAGGGGAGAGGGGAAGAAGGGGGAGAGGAAGGGGAGGA
GGGTGGTGGAGGAGGAGGAGGAAGAGGAAGAGGAGAAGAAGGAGGTGGAG
GTGGAGGAAGAGGAGGAGGTGGAGGAGGAGGGGGAGGACGAGGAGGAGGA
GTTTGAGAGCTTAGCGACTCAGAGCCCGAGTCCCAAGATGACGGCCATCA
TGGGCACAAGGATCGGGCGAGGAGGAGGGAGAGGAGGAGGAGGGGGGGGA
GGGGTACGCTCGCTGCGTATGATGATGGATGAGCAGGAAATCAACCCGGC
TGAAGTGGAGTCCGCGTTGGACGCCGTGAATGCCGCCGCCGCCTGCATGA
GGTACCAGGGCGGGAGGGGGAACGAGGACGAGGGAGAGGGGGAGGAGGAG
GAGGCGGGAGTGCAGCTTGTCTTCCCCGAGGCAGTGGCCGAGAGCATTAC
GAGCGTGCTGCAGAAGCTCGATGATGGGGGTGTCATCAACGAAGTAACGG
ACTTTTGCCTCAACGTCGCTGCCTTAGAACCCCCCTTCTCCCGGAACCAC
ATGCCTCCTGCATTTTTCATGGACATTCTCCACCCCTCCCGCCCTCCTCC
AGGGGACGAGGACGAGGAGGAGGGCGAGGACGGAGGGGGGGGACGGGAGG
ACGAAGAGGGCCGGTTTCGTCGATGCATCCAGAGAATGGAGCTGGTCAAA
AAATGCGCGAAGGAAGAGAGGGAAGATGGGGCGGCCTTCCGAAAAGCGGT
GGAGAGCGTGGAGAGGCGGGCCCAGGATTACAAGGAGGAGATCAAGAACC
GACAGATGCACTACGATGAGCAAGTGGAGTCCAAGGCGGCGGAAGTAGAG
GAAAATGACACCCGGCTCCATGAAGAGAGGGCCTCCCTCCGTACCCTCCT
GGAAGGGGAGTTTAATTTTGACGAGGAGCTGCGGGCAAGGCTAGGGGAAG
GCTTCGATGCCGGCGAGGACGCCCACCTCTCGTTGGAGGCCTCCAAGATG
CACCTGGAAAATCTGCAGGAGCTACAGGCACTGTACAGCACGATCGACTG
TCGGCTGGACGCCTACCTTTCCTTCGTTCTGGAACATGTTGCCCGACTCC
AGGAGCAGGTAGAGCCCATGCTCAGGCAACGCCGGACCGAGCGTATCCGC
AAGCTTTATCGGGTCCGACGCACGCTGCACAATCTTTTCTCCGCCGCCAC
GGCAAGCAAGAATGAGGTCCTGCAAAGCATCGAGGCCGACAAGGCTGCCC
TCCAAGATGAGCTTGCGAAACTTACCCGGAAGTACACTAACGCCGGCCCC
ACCATTCAGGCGGACATGGCCGCCTTGCGGGAGAAGGTTAAGGAGATGAG
TGAGCAGTGGCAGCTCCACCGACAGGCCCTCGAAGACATGCGCACTGAGC
ACACGGAGGCCAAGATCGACATCAGCCTGCTTCTGGAAGATGAAGTCCGC
GAGGCCCACGCGACCGAGGAGGCCGAGTTGGAGGAGGATGATGAAATGGG
GGAGGACGAGGGCGAGGCAGGGAAGGAGGGAGGACAGAAGGCCCACGCGC
CGTCAAGGATGTTTTGCTCGATAATGTGAGACGAGAAAGAGTGAGGGGAG
GAGGGATATGAGGTATGGATATAGAGGAAGGAAGAGGGGGACGAGCTGCT
GGGAGGAGAAATAAGACATTCATAGTGAAGAAGATGAGGAAGAGGATGAT
GGTGAAGAAGATAGAGACGGGGGAGGAGGGAGAAAAGGAGGAGGTGCAAG
GGGAGGAGCAAGCGAGCGAGGAGAGATTGTGCCCGGTCAAGTCATTTTCC
TTTGTGGTATGTTTACGATTATTTGAGGTGCATGAGAAGGGAAATGAAGG
TGCGAAGAAGAGGTATGAAGAAAGGAGGCTAGGCAATGCGTAGAGAGAGG
CAGGTGAGGTAGACATGCAAGGTTGGGCACGCGCAATCAACCTCGTCGCA
GGAGAAGTTAGAAGACTATTAAAGGAATCGGAGCACCGAAATTGTCGTCG
GTCGAAGGCTGTATAAATGTAACGACTTTGAAAGGTAGTAGATGAGGAGG
GGAGGGAAGAGGGGGAGGAGGAAGGCATTGGATTAATGAAGCCAGGAGGA
GAGGTACGCCCCCGCTTGAGATAGAGTAGGTTGCTACATGCTACCCTCGT
GTCTCGCCAGTGGTGGATTAGGACGTCCAATGCTCTCTTCCTCCTTTTGA
ACCTGAGCCCCACTAGCACAAGGCGCAAGCAGTGGGAGGAAGATGCCGAA
AGAACAAAGAAAAGAAGAAGAAGAAGAAGAAGAGAAGAAGAAGAAAGAAG
CACTCTCCATGGCAAGCGAATAAAAGATGCCGTAGGTAATCGTGGCTTTT
CATGCGTCCCCTGAACCACTACACTCTCTATGAGTAAGTGTGCAGGCCCC
TGGCCTTGAAGCCATCCTCTCCGACCCCCCCCCCCCCCTTCTTGCACCCT
GAAGAAAGCCTCTTTTTACCGGTACTTACAGCCCCCGAGTCACAACACGA
GGAATGCACGCCTCAAGGCGACGCTTTCTGCGTTCGTTTCATGGTCTGTT
CCTAGCTTGACGCCCAGGACCGCCATGCCTCCACCTTTCCACCATCCTCC
GCACAAGGGTTCAGTGAATTTCACTGATGATGAAAAGCAACAAGTAAAGG
ACTGCAGAAGC

protein sequence of NO12G00360.1

>NO12G00360.1-protein ID=NO12G00360.1-protein|Name=NO12G00360.1|organism=Nannochloropsis oceanica|type=polypeptide|length=705bp
MPKAKAATSSTARGRTTRTRASTNKETKLLESPPLWEREEADSVSSVNEQ
EPLVDLTYASPATFNVGKSITPSIKSEYYDEEEEEEEDGGRGGDGVGKGS
NMHSPTPSSVASSSTSGRRGARKAAAAAATALRNTLSRIGSPHTPSSSVG
ASPSSPSSSLASSTSSRRSLSFMPSRKGKREGERGEGKKGERKGRRVVEE
EEEEEEEKKEVEVEEEEEVEEEGEDEEEEFESLATQSPSPKMTAIMGTRI
GRGGGRGGGGGGGVRSLRMMMDEQEINPAEVESALDAVNAAAACMRYQGG
RGNEDEGEGEEEEAGVQLVFPEAVAESITSVLQKLDDGGVINEVTDFCLN
VAALEPPFSRNHMPPAFFMDILHPSRPPPGDEDEEEGEDGGGGREDEEGR
FRRCIQRMELVKKCAKEEREDGAAFRKAVESVERRAQDYKEEIKNRQMHY
DEQVESKAAEVEENDTRLHEERASLRTLLEGEFNFDEELRARLGEGFDAG
EDAHLSLEASKMHLENLQELQALYSTIDCRLDAYLSFVLEHVARLQEQVE
PMLRQRRTERIRKLYRVRRTLHNLFSAATASKNEVLQSIEADKAALQDEL
AKLTRKYTNAGPTIQADMAALREKVKEMSEQWQLHRQALEDMRTEHTEAK
IDISLLLEDEVREAHATEEAELEEDDEMGEDEGEAGKEGGQKAHAPSRMF
CSIM*

mRNA from alignment at chr12:124363..130633+

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>NO12G00360.1 ID=NO12G00360.1|Name=NO12G00360.1|organism=Nannochloropsis oceanica|type=mRNA|length=6271bp|location=Sequence derived from alignment at chr12:124363..130633+ (Nannochloropsis oceanica)
CTCCATCATCTAGGCCGTGTCTGTCCGTGTATGCGTGCTCAGCGTTGGTG
GGTTTCGTACGGGAAAAGGGACTATGGTCACATGATACCACTCGTGTGAG
GATTGGATGATGCTCGAGTGCGGCGCAGGATGAGAAGCGCCTCCTTTCGC
CACGGGCGTAGGTAGCCAACACCGCTTACATAAGATGTACGATCACAACT
ATGTTATGCGTGTGGTAGTACTGGGAAGTGGTGGCCATGTGCGAATGGGA
AGCAAGCAAGTCAGGCAAACACTCTCTGCGGCTTCCCTGACAACTTGCCG
CATCTAATTTTACCCTCCCAGCTACACAATTATACTCTCAGACAGACTGA
AAAGGGTGGCCTGCAGCGTTTCATTTGACAGGGGATAATATTAATCTTGC
GTGCAGTCAGGATGCCTTAAATGCGCCTGAAAAGAGACGAGACATGACGG
GAAGCGGCGCCCAAGTGCCTCTCGCGCCCTTGCCGCCCTTTCGATTTTTG
AACACTCGCTACAGCAACGTTGATGATACACACAACCACACAAGCCTCAC
TACCCATCAACTTATAAAAATTGCGTGTGTAAAAAGCTCACATGCAGCCA
CTGCGCATTGAGTTCAGTCTTTTTCTTCAGCCTCTCTCGTACTCATCACC
ATCGCCATCATCACCACCACCACCCTGCCACTACCCTGCCTGCCCCTGGT
CGTTGGTAGAGCAGCAGGAACAGCAAAATTACAGCTCGCCCACCAACGCC
GCAAAGTTCCGAGTCTAAGTCCAGATCCATGACGACTGCTGTCCTATGGC
CACAAAATTTGCGTCGTCATTGTCTTCACGCATCCTCATCGGCTCGCTTC
ATTCTCTTCACTCACAGGCCGAAACGAGCCCCACACCGCCAGTACCACCA
ACTTTACCACAAGCATGCCAAAGGCCAAGGCCGCCACCAGCAGCACGGCA
CGAGGCCGCACCACCCGTACCCGTGCCAGCACCAACAAAGAGGTTCGTGA
GAAGGAGGGGAAAGAGAGTGTGGAAAGACGGAGGAGAAACCTCCGAAGCA
TCCTCCTGACGTCTAGCGTGGTGCGGTGCTCGCGAGGGCTACAGAAAGAG
AGATTGAGCAGGAAAATGGAGGCAGGAATATGAAAGGCTTAATAAAAAGG
CTATTTACCTGTCTAGACGTGAGGAGGAGAGTTAGTTTGGCTTCCTTCCT
AGGCCAGGCGTGTAACTTAACCCCCATCCCGCAACCAACAGACAAAGCTG
CTTGAGAGCCCGCCCTTATGGGAACGTGAGGAGGCCGATTCGGTCTCGAG
TGTGAATGAACAGGAGCCACTTGTTGATGTACGTGCGTCTGTGCAGTGCG
ATTTACGTCTGTATCAGTGTCTGTGTCAGTGTCTCTGTCTGTCTCTCATT
TATCCGTTCTTTGTGTATACCTATCATATCTTCATCGGCCTCTACCGTTG
ATACACTACTGCTTCTGTTCTTATTTTCGGTGATTTTGCTCCAGAATGCC
TGCACTCTCGGTACCCTTTGTCCAATCCTCCCACCCTCCCTTCCTCCCTC
CCTCTACCACTTATACATAGCTGACATACGCTTCCCCCGCTACTTTTAAT
GTGGGAAAGAGCATCACCCCCTCCATCAAGAGCGAATATTACGATGAGGA
GGAAGAGGAGGAGGAGGACGGAGGAAGGGGAGGAGATGGGGTTGGGAAGG
GAAGTAATATGCACTCGCCGACCCCTTCCTCGGTCGCTTCCTCCTCAACG
TCAGGGAGAAGGGGGGCGAGGAAGGCCGCTGCTGCTGCTGCTACTGCTCT
TCGTAATACACTCAGCAGGATAGGGAGCCCTCACACTCCCTCTTCCTCTG
TTGGTGCTTCCCCTTCCTCCCCCTCGTCCTCCCTTGCGTCCTCGACCTCC
TCCCGGCGGTCGTTGTCGTTCATGCCCTCGAGGAAGGGGAAGAGAGAAGG
GGAGAGGGGAGAGGGGAAGAAGGGGGAGAGGAAGGGGAGGAGGGTGGTGG
AGGAGGAGGAGGAAGAGGAAGAGGAGAAGAAGGAGGTGGAGGTGGAGGAA
GAGGAGGAGGTGGAGGAGGAGGGGGAGGACGAGGAGGAGGAGTTTGAGAG
CTTAGCGACTCAGAGCCCGAGTCCCAAGATGACGGCCATCATGGGCACAA
GGATCGGGCGAGGAGGAGGGAGAGGAGGAGGAGGGGGGGGAGGGGTACGC
TCGCTGCGTATGATGATGGATGAGCAGGGTGAGTCAATAAGCCCGCGCCC
CGCCGTGATTGGTTCTTTGTCCGCCGCCTCTCTCCCCCTGTTACTTCTAT
TTTCTTTACTTCTCTTTCCCTCCTTATTTTCGTTTCCGGCTGCCTGACTT
TTCCTTTTCTCTTTCCTCCGTCTCCGAATCTACCAAGAATTCTGTAGAAC
CTGCCACCGCATATTTTCTCATGCTCCTCCATCCTTTCCTCCCCTTTACC
CCTCCCTCCCTCCTTGCCTCCCTCCCCCCCTCCCTCCCTCCAGAAATCAA
CCCGGCTGAAGTGGAGTCCGCGTTGGACGCCGTGAATGCCGCCGCCGCCT
GCATGAGGTACCAGGGCGGGAGGGGGAACGAGGACGAGGGAGAGGGGGAG
GAGGAGGAGGCGGGAGTGCAGCTTGTCTTCCCCGAGGCAGTGGCCGAGAG
CATTACGAGCGTGCTGCAGAAGCTCGATGATGGGTAGGAAGGGAGGGAGG
GAGGAGGAAAGGGAGGAAAGGAAACAGAGAGGAAGAAGGAAGAAGGTGAT
TGCACCGTCCGCATGGAAGCTGACCGTGTCTCCTTCTTTCCTGCCCTCCC
TCCCTCCCTCCCTCTTTCCCACCGTCCCTCCCTCCAGGGGTGTCATCAAC
GAAGTAACGGACTTTTGCCTCAACGTCGCTGCCTTAGAACCCCCCTTCTC
CCGGAACCACATGCCTCCTGCATTTTTCATGGACATTCTCCACCCCTCCC
GCCCTCCTCCAGGGGACGAGGACGAGGAGGAGGGCGAGGACGGAGGGGGG
GGACGGGAGGACGAAGAGGGCCGGTTTCGTCGATGCATCCAGAGAATGGA
GCTGGTCAAAAAATGCGCGAAGGAAGAGAGGGAAGATGGGGCGGCCTTCC
GAAAAGCGGTGGAGAGCGTGGAGAGGCGGTAAGGGAGGGAAGGAAGGAGG
AGAGGAGGAGGGAGATGCGGCCTTACATATATTCTTCATAAATTATTTTA
TTTGTTTTTTTATTCATCCCTTTATTTTTTCATTCACCCCTTTGATTATT
CATTCATCCGTTGACAGGGCCCAGGATTACAAGGAGGAGATCAAGAACCG
ACAGATGCACTACGATGAGCAAGTATGTCCTTTCCTATTTCTCTCCCTCC
CTCCCTGTGAAATTCTTCCTCTCCTCCCTCTCTTCCTCCCTTTCTGACCT
GGTGAATCACAGGCTGCTGGGAAAAGGTGGGGGAGAAGAGCAGCAGCACA
TGCGCTTGCAAGTGAAGGCGTACCTACAGTCTGACAATGAAGAAACTGAC
CCCTCCCCCTTTCCCTCCCTCCCTCCCTCCCTCCCTCCCTTCCTCCCTCT
TCCACCAGGTGGAGTCCAAGGCGGCGGAAGTAGAGGAAAATGACACCCGG
CTCCATGAAGAGAGGGCCTCCCTCCGTACCCTCCTGGAAGGGGAGTTTAA
TTTTGACGAGGAGCTGCGGGCAAGGCTAGGGGAAGGCTTCGATGCCGGCG
AGGTGAGGAGGAGGGAGGGAGGGAAGGGAGGATGGAAGATGCATAGATCA
GCTGATATGGCAGTGTTTGCTCAGCTCCTAACTTGCCATCCTTCCCTCCC
TCTCTAGGACGCCCACCTCTCGTTGGAGGCCTCCAAGATGCACCTGGAAA
ATCTGCAGGAGCTACAGGCACTGTACAGCACGATCGACTGTCGGCTGGGT
GAGGAGGGAGGGGAGGGAGGGAAGGAGGGAGGGGGGAAGGCTCAGTTGTG
GCTATTCAGAAGTCTTCTTTCTCGTTCTCTCACCCATCCTGCCCTCGTTT
TCTCCCCCCCTCCCTCCCTCCTCCCCCCTCCCTCCACAGACGCCTACCTT
TCCTTCGTTCTGGAACATGTTGCCCGACTCCAGGAGCAGGTAGAGCCCAT
GCTCAGGCAACGCCGGACCGAGGTCAGGAATGGGGGGAGGGAGGGAGGGA
GGGAGGGAACGAAGGAGGGAGGGAGGGGAGGAAGGCAAGTGAATGAGGGG
GAGCGAACGGGAATGCACCCTCCCTAAACAAGCAAGCGCTCACATTCATA
TTCTTTCTTCTTTCCCACCCCTCCTCCCACTGCCCTGCCTCCCTCTGCCA
GCGTATCCGCAAGCTTTATCGGGTCCGACGCACGCTGCACAATCTTTTCT
CCGCCGCCACGGCAAGCAAGAATGAGGTCCTGCAAAGCATCGAGGCCGAC
AAGGTATTTTCCGTCCTTCCTCCTCTTTTCCTCCCTCCCTCCCTTCCTCC
CTCCCTCCCTCTCGTTTCCATCCATGCCTGTTCTGCTTTCCCTAACTCTC
CTCCCCATTCCCCCCCTCCCTCCTTCTCCCTCCCTCCCTCCCTCCCCCCT
TTCCAGGCTGCCCTCCAAGATGAGCTTGCGAAACTTACCCGGAAGTACAC
TAACGCCGGCCCCACCATTCAGGCGGACATGGCCGCCTTGCGGGAGAAGG
TGAGGGAGGGTTGGACGGAGGGGGAGAAGGGAGGGGGGAAAACAATAGAG
GAGGGGGAAAGCTGTATCTTGAGGATAACTTGAAAGACAGGCGTGGGATG
GAAAGGAAGGTGTGGCGTGAGACACCCATACCATTAAATAAATGAATTTC
AAAATCAAAACACCACAAAGGTTAAGGAGATGAGTGAGCAGTGGCAGCTC
CACCGACAGGCCCTCGAAGACATGCGGTAAGCTTCCCCTCCCTTTCTCCC
TCCCTCCCTCCCTCCCTCCCACCCTCTTATCCTCTTCAGGTCAAGCAAAT
TAATTTTTCCACCTCTCCCTCCTTCCCTTCCTCCCTCTCTCCGTCCTTGC
AGCACTGAGCACACGGAGGCCAAGATCGACATCAGCCTGCTTCTGGAAGA
TGAAGTCCGCGAGGCCCACGCGACCGAGGAGGCCGAGTTGGAGGAGGATG
ATGAAATGGGGGAGGACGAGGGCGAGGCAGGGAAGGAGGGAGGACAGAAG
GCCCACGCGCCGTCAAGGATGTTTTGCTCGATAATGTGAGACGAGAAAGA
GTGAGGGGAGGAGGGATATGAGGTATGGATATAGAGGAAGGAAGAGGGGG
ACGAGCTGCTGGGAGGAGAAATAAGACATTCATAGTGAAGAAGATGAGGA
AGAGGATGATGGTGAAGAAGATAGAGACGGGGGAGGAGGGAGAAAAGGAG
GAGGTGCAAGGGGAGGAGCAAGCGAGCGAGGAGAGATTGTGCCCGGTCAA
GTCATTTTCCTTTGTGGTATGTTTACGATTATTTGAGGTGCATGAGAAGG
GAAATGAAGGTGCGAAGAAGAGGTATGAAGAAAGGAGGCTAGGCAATGCG
TAGAGAGAGGCAGGTGAGGTAGACATGCAAGGTTGGGCACGCGCAATCAA
CCTCGTCGCAGGAGAAGTTAGAAGACTATTAAAGGAATCGGAGCACCGAA
ATTGTCGTCGGTCGAAGGCTGTATAAATGTAACGACTTTGAAAGGTAGTA
GATGAGGAGGGGAGGGAAGAGGGGGAGGAGGAAGGCATTGGATTAATGAA
GCCAGGAGGAGAGGTACGCCCCCGCTTGAGATAGAGTAGGTTGCTACATG
CTACCCTCGTGTCTCGCCAGTGGTGGATTAGGACGTCCAATGCTCTCTTC
CTCCTTTTGAACCTGAGCCCCACTAGCACAAGGCGCAAGCAGTGGGAGGA
AGATGCCGAAAGAACAAAGAAAAGAAGAAGAAGAAGAAGAAGAGAAGAAG
AAGAAAGAAGCACTCTCCATGGCAAGCGAATAAAAGATGCCGTAGGTAAT
CGTGGCTTTTCATGCGTCCCCTGAACCACTACACTCTCTATGAGTAAGTG
TGCAGGCCCCTGGCCTTGAAGCCATCCTCTCCGACCCCCCCCCCCCCCTT
CTTGCACCCTGAAGAAAGCCTCTTTTTACCGGTACTTACAGCCCCCGAGT
CACAACACGAGGAATGCACGCCTCAAGGCGACGCTTTCTGCGTTCGTTTC
ATGGTCTGTTCCTAGCTTGACGCCCAGGACCGCCATGCCTCCACCTTTCC
ACCATCCTCCGCACAAGGGTTCAGTGAATTTCACTGATGATGAAAAGCAA
CAAGTAAAGGACTGCAGAAGC

Coding sequence (CDS) from alignment at chr12:124363..130633+

>NO12G00360.1 ID=NO12G00360.1|Name=NO12G00360.1|organism=Nannochloropsis oceanica|type=CDS|length=2115bp|location=Sequence derived from alignment at chr12:124363..130633+ (Nannochloropsis oceanica)
ATGCCAAAGGCCAAGGCCGCCACCAGCAGCACGGCACGAGGCCGCACCAC
CCGTACCCGTGCCAGCACCAACAAAGAGACAAAGCTGCTTGAGAGCCCGC
CCTTATGGGAACGTGAGGAGGCCGATTCGGTCTCGAGTGTGAATGAACAG
GAGCCACTTGTTGATCTGACATACGCTTCCCCCGCTACTTTTAATGTGGG
AAAGAGCATCACCCCCTCCATCAAGAGCGAATATTACGATGAGGAGGAAG
AGGAGGAGGAGGACGGAGGAAGGGGAGGAGATGGGGTTGGGAAGGGAAGT
AATATGCACTCGCCGACCCCTTCCTCGGTCGCTTCCTCCTCAACGTCAGG
GAGAAGGGGGGCGAGGAAGGCCGCTGCTGCTGCTGCTACTGCTCTTCGTA
ATACACTCAGCAGGATAGGGAGCCCTCACACTCCCTCTTCCTCTGTTGGT
GCTTCCCCTTCCTCCCCCTCGTCCTCCCTTGCGTCCTCGACCTCCTCCCG
GCGGTCGTTGTCGTTCATGCCCTCGAGGAAGGGGAAGAGAGAAGGGGAGA
GGGGAGAGGGGAAGAAGGGGGAGAGGAAGGGGAGGAGGGTGGTGGAGGAG
GAGGAGGAAGAGGAAGAGGAGAAGAAGGAGGTGGAGGTGGAGGAAGAGGA
GGAGGTGGAGGAGGAGGGGGAGGACGAGGAGGAGGAGTTTGAGAGCTTAG
CGACTCAGAGCCCGAGTCCCAAGATGACGGCCATCATGGGCACAAGGATC
GGGCGAGGAGGAGGGAGAGGAGGAGGAGGGGGGGGAGGGGTACGCTCGCT
GCGTATGATGATGGATGAGCAGGAAATCAACCCGGCTGAAGTGGAGTCCG
CGTTGGACGCCGTGAATGCCGCCGCCGCCTGCATGAGGTACCAGGGCGGG
AGGGGGAACGAGGACGAGGGAGAGGGGGAGGAGGAGGAGGCGGGAGTGCA
GCTTGTCTTCCCCGAGGCAGTGGCCGAGAGCATTACGAGCGTGCTGCAGA
AGCTCGATGATGGGGGTGTCATCAACGAAGTAACGGACTTTTGCCTCAAC
GTCGCTGCCTTAGAACCCCCCTTCTCCCGGAACCACATGCCTCCTGCATT
TTTCATGGACATTCTCCACCCCTCCCGCCCTCCTCCAGGGGACGAGGACG
AGGAGGAGGGCGAGGACGGAGGGGGGGGACGGGAGGACGAAGAGGGCCGG
TTTCGTCGATGCATCCAGAGAATGGAGCTGGTCAAAAAATGCGCGAAGGA
AGAGAGGGAAGATGGGGCGGCCTTCCGAAAAGCGGTGGAGAGCGTGGAGA
GGCGGGCCCAGGATTACAAGGAGGAGATCAAGAACCGACAGATGCACTAC
GATGAGCAAGTGGAGTCCAAGGCGGCGGAAGTAGAGGAAAATGACACCCG
GCTCCATGAAGAGAGGGCCTCCCTCCGTACCCTCCTGGAAGGGGAGTTTA
ATTTTGACGAGGAGCTGCGGGCAAGGCTAGGGGAAGGCTTCGATGCCGGC
GAGGACGCCCACCTCTCGTTGGAGGCCTCCAAGATGCACCTGGAAAATCT
GCAGGAGCTACAGGCACTGTACAGCACGATCGACTGTCGGCTGGACGCCT
ACCTTTCCTTCGTTCTGGAACATGTTGCCCGACTCCAGGAGCAGGTAGAG
CCCATGCTCAGGCAACGCCGGACCGAGCGTATCCGCAAGCTTTATCGGGT
CCGACGCACGCTGCACAATCTTTTCTCCGCCGCCACGGCAAGCAAGAATG
AGGTCCTGCAAAGCATCGAGGCCGACAAGGCTGCCCTCCAAGATGAGCTT
GCGAAACTTACCCGGAAGTACACTAACGCCGGCCCCACCATTCAGGCGGA
CATGGCCGCCTTGCGGGAGAAGGTTAAGGAGATGAGTGAGCAGTGGCAGC
TCCACCGACAGGCCCTCGAAGACATGCGCACTGAGCACACGGAGGCCAAG
ATCGACATCAGCCTGCTTCTGGAAGATGAAGTCCGCGAGGCCCACGCGAC
CGAGGAGGCCGAGTTGGAGGAGGATGATGAAATGGGGGAGGACGAGGGCG
AGGCAGGGAAGGAGGGAGGACAGAAGGCCCACGCGCCGTCAAGGATGTTT
TGCTCGATAATGTGA

Synonyms

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