NO11G03520.1, NO11G03520.1 (mRNA) Nannochloropsis oceanica | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	NO11G03520.1
Unique Name	NO11G03520.1
Type	mRNA
Organism	Nannochloropsis oceanica (N. oceanica IMET1)
Sequence length	4004
Alignment location	chr11:1132046..1137537 +

Link to JBrowse

Properties

Mutants

Expression

No biomaterial libraries express this feature.

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
chr11	genome	chr11:1132046..1137537 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Gene prediction for N. oceanica IMET1	2017-10-24
Homology annotation for N. oceanica IMET1	2017-10-25
InterPro analysis for N. oceanica IMET1	2017-10-25

Annotated Terms

Homology

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BLAST of NO11G03520.1 vs.
Match: EWM24825.1 (hypothetical protein Naga_100234g1 [Nannochloropsis gaditana])

HSP 1 Score: 258.5 bits (659), Expect = 6.300e-65
Identity = 133/183 (72.68%), Postives = 155/183 (84.70%), Query Frame = 0

Query:  516 MREVAVQIASLPPSMQDKSFRLMNRTMVNFQDKVGFVLTKGVTWETVLQLVQGELKSFREAGIDPLSESVARELFFVAASRVFPDLPLDEWNRNVESLGDRTRKFWMESQIKMDDLLP--SPYPSSSSGLPSSLPASLRLSSPSAFYTSPHSSNSTLAAAAAGNYLKTWLESLEAALVLGREG 697
            MREVAVQI +LPP MQ+KS++LMNRT+VN QDK+GF+L  GV+WET+L+L+Q EL++FRE GIDPLSESVARELFFVAAS+VFPDLPLDEWNRNVESL DRTRK W ESQ+KMDDLLP  S YPSS+   P SLP+++RL SPS+ Y+S  SSN TLAAAA GN LK WLESLEAAL+L   G
Sbjct:    1 MREVAVQIETLPPPMQEKSYKLMNRTVVNLQDKLGFILASGVSWETILRLIQAELRAFREEGIDPLSESVARELFFVAASKVFPDLPLDEWNRNVESLSDRTRKLWWESQMKMDDLLPPSSSYPSSTLEGPPSLPSAMRLRSPSSLYSSYSSSNRTLAAAATGNDLKRWLESLEAALILAGVG 183

The following BLAST results are available for this feature:

BLAST of NO11G03520.1 vs.

BLAST of NO11G03520.1 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 1


Match Name	E-value	Identity	Description
EWM24825.1	6.300e-65	72.68	hypothetical protein Naga_100234g1 [Nannochloropsi...	[more]

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
NO11G03520	NO11G03520	Nannochloropsis oceanica (N. oceanica IMET1)	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
NO11G03520.1	NO11G03520.1-protein	Nannochloropsis oceanica (N. oceanica IMET1)	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
NO11G03520.1.cds1	NO11G03520.1.cds1	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO11G03520.1.cds2	NO11G03520.1.cds2	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO11G03520.1.cds3	NO11G03520.1.cds3	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO11G03520.1.cds4	NO11G03520.1.cds4	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO11G03520.1.cds5	NO11G03520.1.cds5	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO11G03520.1.cds6	NO11G03520.1.cds6	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO11G03520.1.cds7	NO11G03520.1.cds7	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO11G03520.1.cds8	NO11G03520.1.cds8	Nannochloropsis oceanica (N. oceanica IMET1)	CDS

Sequences

The following sequences are available for this feature:

mRNA sequence
protein sequence
mRNA from alignment at chr11:1132046..1137537+
coding sequence from alignment at chr11:1132046..1137537+

mRNA sequence

>NO11G03520.1 ID=NO11G03520.1|Name=NO11G03520.1|organism=Nannochloropsis oceanica|type=mRNA|length=4004bp
TAACAAAGGCTTGAGGTGCTCTGTGGAAGTGCAGTGGGGAAGTATGGCTT
GAATGGTGAGGAGGCTGGCGAGATGGGATGATTATATGTTTCGCACAGGG
AAGATGGCTCAAACACAGGCTTCGTCATGGTGAGAGCGATAGACCGGGGG
TATGGCCACGGCCGAGCGACCGGAGGTGTGGGAGGTGCGCTTGGATAGCG
TTGAGGAACATGGTGGTTGAAGAAGTGCCGAGGGCAACTCGCTTGCCCCC
GCTTGCTCGTGTCGGGTTATGTGGGAGGGCCTGGAGCATTAAGTAAGTGC
AAGCGCCGGGTGGGCATTGTGCCAAGGAGGGTACAGGGCGACCAAACGTA
AACATGAGATAAACCTCCTTTCTGCTCATACGTAGGACAATAAAAACACA
ATCTAGCGGCCTCCGAACATCGCCGCCCATCCACGCGCCGCTTGCTTTTG
CTTCAATTGCCTCGCCACGTCCTTCAAAGCGGACGAGACATTCACGCACT
TCCCACCGTACATCCTCACAGCCCCATGAAGACAAGGCACAAGTACGACG
ATGACGACCGCCATGATTCGGACCGCGACAGGCGGAGGAGAAGAAGGAAT
AACCCGGAGAGTGGCACTAGGAATGTGATGCTGCCACTGCTAGCGCGGTG
GTGGCCTGCCTCGCCTCCAGCTCCTGTCACTTTTCTGGCGAGCTTGGTCT
TTGTAATTCTCCTTCTTCAGCCTCTTCCCTCCACCTCCTCTTTCTACCCA
TCACGACACACCGCCCCTATTGCCTTTATCTTCGCGCATCCTCGCGTCCC
AGGCATCGCTGGCCTGTTCAGCCGTACCTCAGTCTCCCTCTCACGTCTCT
ATTTTCATTCGTGGCCCCATCAGCAGCAGCAGCAGCAGCAGCAGCAGCAG
CAGACGCAGTACGACAAACAACTTCATCGTAGCCTGCACCAGCAACACCA
CCAGCAGCAGCTACGATTACCATCGTCCTGCCTCCACATGGTATCCACGG
GCGCCAGAAGCAGCAGCAGCAGCGGTACGGCTAGAAGAAGAGCAACGCCC
AGGGGTCAAGATGAGGAGGAGGGAGCGGGAGAGAGGCCGGGGGAGGGGGA
GCTTGACATCTCGTTTACCTCCTCCACCTTCTCGGCAAAGGGGGAAGGGG
AGGAATGGAGTCATGGCGGGGTAGTGCTGAACGAGAGCGAGAGGGCACAG
CGCGGGTACCGCATTTTCAAGACGCGGCAGAAGGAGGACGAGGAAAAGGA
GGCGACGGGGAGGTGGAAGAAGGTCGAGCAGATGAGGGGGAAAGAGTCGG
AGGCGAAGAATAGAGCGCCGAAGGAGGGAGGAGGAGGAGGAGGAGGAGGA
GGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGGGGGGGGGTGGGGGA
TGGGAAGGCGAAGGGCGCGGAGGTGGCGATGGCCTCGTCGAGTGAGAAGT
GGAAGGGTTCTGCCACTTCTGACGCTGGTGCTATTGTGACTCCCGCCGCT
CACAGTGTGCAGGAGGAGGGGGAATGGATAAAGGGAGGAGAGGTGATTAA
GGTGAAGCCGAATCAGAACAGGAGGGTGACGATAGTAGAGGAGGAGAGAA
AGCAGGAGGAGGAGGGGATGGAGGAGAGGAGGGAGGAGGAGGGAAGAAGG
GAGGAGAAGAGAGAGAAAGAGCAGGAGGAGAACGAGGAGGAGGAGGAGAG
GGAGGAGGAGGACGAGGAGGAGGGCGTGATCAATCATTTTGTCGGCATGC
TGGTAAACGGGTATGATATGTCGGCGGGCGCCTACATGATCTCCACTCCC
AAGGAGGAGGGGGGGAAAGGAGGAGGGGGGAGGAGGCTGGAAGGGGGGGT
GGGTAACACAGTCGAAGGAGGCTGGGGAGGAGGAGAAGAGGAGGGAGTAG
GGAGGAGAAGGGGTGTCACTTTGAGCGGCCTGTTTTTCAAGGTGCGAGAC
CGTTTTTTTCCCAACTTCAACCACGTGGCCTGGGGAGAGCGTGTCCTCAC
CCGCCTGGTGAAACGGATGGACAGAGAAATCCTCTTGGGCTGCCTCGCCA
TCGTGGGGCGGGAGCTGGTGATGCGGGAGGTGGCCGTGCAGATCGCCTCG
CTGCCTCCGTCAATGCAGGACAAGAGCTTCCGGCTCATGAACCGCACCAT
GGTCAATTTCCAGGACAAGGTCGGCTTCGTCCTGACCAAGGGCGTGACGT
GGGAGACGGTGTTGCAGCTCGTGCAGGGAGAGCTCAAATCCTTCCGAGAG
GCTGGCATCGACCCGCTCTCCGAGTCTGTGGCGCGAGAGCTGTTTTTCGT
GGCGGCGAGCAGGGTGTTTCCCGACCTGCCCCTGGACGAGTGGAACCGGA
ACGTGGAGTCTCTGGGCGACAGGACGAGGAAATTTTGGATGGAGAGCCAG
ATCAAGATGGACGACCTCCTCCCCTCCCCCTACCCCTCCTCATCAAGCGG
GCTTCCGTCCTCCCTTCCCGCCTCCCTGCGCCTCTCCTCCCCCTCCGCCT
TCTACACCTCCCCTCACTCCTCCAACAGCACTTTGGCAGCGGCAGCGGCG
GGGAACTACCTCAAGACATGGCTGGAGAGCCTCGAGGCGGCCCTGGTGCT
GGGTAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAG
GGGAAGGGGCAAAAGAAAAGGATTAAGACGACTCCCACTTTTCTCCCCCT
TTTTTCGGAAAAGACGCCATCTAATCCTTTCCTCCCTCCCTCCAGCCGGC
GTAGGTATCGTGGATGAGAGCGGCAAGACCCCCACCGTGGCTTTGCGTGA
GGTGGGTGAAAACTTGGAGCGCCTCAAGCACCAGTCAGAAGACCTCCTGT
TGCTCGTTGAGGACGAGATCAGGTATATCGCTAAGGGAGGAAAGCCGGAG
GTAAGGAAGGACCGGGGAGGGAAGGAGAGAGAAGGGGAGGAAGGGAGAGA
GGGAAGGAGAGGGGAGGGAGGGAGGGAGGGAGGGAGGGAAGGGGGTAGGG
GGGGTAGATCTGCGTGCTGGAATTCTTCAACAAGGATATTGCGTAAAAGC
GCTCTCTTGTATAAACGTACAACATATTCACTGCCCACTGAAATCATGTA
CTTCCCTCTGCTCTCCTTTCTCCTTGGCAGGTGTCGATGAAGCACCTGGG
CGAAAGCGTGAGAGCCTACGCAGGGGAATACACGCGACTCGTTCCACAGG
AGTGGCGGAAGGCCCTTAATCTCCCCCCACCTCCTCCCCTGCCCCTGCCA
CCGTACAAGAGGCGGGCTGAGGAGGTGGAGGAGGTGGAGGAGGTGGGGGA
GGAGGAGATCGAGGCTTTGGTGGGGGATGAGGAGGGGGACTGGTTTTAGA
TGGCGGAAGTGGAGGAAAGGGAAGAGGAGAGGGGATTAAGGACGTGATCG
CCTCTCCCTCTCCTCCTTATTGTGTAAATGTCTTGTACAAAGGTAAAAGA
CGAGTGCGTTGCACCTCCCATAAGTACAACGAGAAGAAAAAAGACAAATG
GAATGCACATGCGTTACTTTCTTCGTCATGATCCACACAACCAGAAAAGC
AGTGTGTGCCCAATCAGGCGATTGACTGACAATGACAAACGACGGAGCAA
AGAAGAGAAGAAACGTAGGAAATATGTATTCCATTTATGCACTCAGTATC
TAAGCGCTCAAGCCCCCCCCCCCCCGCGGAGATCAATGTAGGAATCAGCC
CTCCAAAGACTTCTGCCTAAGAGAGTTTGACTGCGCGCAGACACTTGTGC
GAGGCGATTAGCTTGACTTGTTCTGTAGCTCTTTGACGCTAAAAGGAAAT
ACTTCACACCTCATACCTACCAATTTTATGAGAGACATTTTTCACCTCAT
TCTGACCGTAAAACTCTTTTTATTGGGGGGGGTTGACATGACATCCTTGA
TTAGCCGTCGTAAAAATTCTGGCTTGCCCCTCGTAGGAGTACAGGCAAAT
TCACCAGCTCGGGCTCCTCCTCCTGTTGCTTCTCATTGTCATCATCGTCA
GAGC

protein sequence of NO11G03520.1

>NO11G03520.1-protein ID=NO11G03520.1-protein|Name=NO11G03520.1|organism=Nannochloropsis oceanica|type=polypeptide|length=717bp
MKTRHKYDDDDRHDSDRDRRRRRRNNPESGTRNVMLPLLARWWPASPPAP
VTFLASLVFVILLLQPLPSTSSFYPSRHTAPIAFIFAHPRVPGIAGLFSR
TSVSLSRLYFHSWPHQQQQQQQQQQQTQYDKQLHRSLHQQHHQQQLRLPS
SCLHMVSTGARSSSSSGTARRRATPRGQDEEEGAGERPGEGELDISFTSS
TFSAKGEGEEWSHGGVVLNESERAQRGYRIFKTRQKEDEEKEATGRWKKV
EQMRGKESEAKNRAPKEGGGGGGGGGGGGGGGGGGGGGGVGDGKAKGAEV
AMASSSEKWKGSATSDAGAIVTPAAHSVQEEGEWIKGGEVIKVKPNQNRR
VTIVEEERKQEEEGMEERREEEGRREEKREKEQEENEEEEEREEEDEEEG
VINHFVGMLVNGYDMSAGAYMISTPKEEGGKGGGGRRLEGGVGNTVEGGW
GGGEEEGVGRRRGVTLSGLFFKVRDRFFPNFNHVAWGERVLTRLVKRMDR
EILLGCLAIVGRELVMREVAVQIASLPPSMQDKSFRLMNRTMVNFQDKVG
FVLTKGVTWETVLQLVQGELKSFREAGIDPLSESVARELFFVAASRVFPD
LPLDEWNRNVESLGDRTRKFWMESQIKMDDLLPSPYPSSSSGLPSSLPAS
LRLSSPSAFYTSPHSSNSTLAAAAAGNYLKTWLESLEAALVLGREGGREG
GREGGREGGEGAKEKD*

mRNA from alignment at chr11:1132046..1137537+

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>NO11G03520.1 ID=NO11G03520.1|Name=NO11G03520.1|organism=Nannochloropsis oceanica|type=mRNA|length=5492bp|location=Sequence derived from alignment at chr11:1132046..1137537+ (Nannochloropsis oceanica)
TAACAAAGGCTTGAGGTGCTCTGTGGAAGTGCAGTGGGGAAGTATGGCTT
GAATGGTGAGGAGGCTGGCGAGATGGGATGATTATATGTTTCGCACAGGG
AAGATGGCTCAAACACAGGCTTCGTCATGGTGAGAGCGATAGACCGGGGG
TATGGCCACGGCCGAGCGACCGGAGGTGTGGGAGGTGCGCTTGGATAGCG
TTGAGGAACATGGTGGTTGAAGAAGTGCCGAGGGCAACTCGCTTGCCCCC
GCTTGCTCGTGTCGGGTTATGTGGGAGGGCCTGGAGCATTAAGTAAGTGC
AAGCGCCGGGTGGGCATTGTGCCAAGGAGGGTACAGGGCGACCAAACGTA
AACATGAGATAAACCTCCTTTCTGCTCATACGTAGGACAATAAAAACACA
ATCTAGCGGCCTCCGAACATCGCCGCCCATCCACGCGCCGCTTGCTTTTG
CTTCAATTGCCTCGCCACGTCCTTCAAAGCGGACGAGACATTCACGCACT
TCCCACCGTACATCCTCACAGCCCCATGAAGACAAGGCACAAGTACGACG
ATGACGACCGCCATGATTCGGACCGCGACAGGCGGAGGAGAAGAAGGAAT
AACCCGGAGAGTGGCACTAGGAATGTGATGCTGCCACTGCTAGCGCGGTG
GTGGCCTGCCTCGCCTCCAGCTCCTGTCACTTTTCTGGCGAGCTTGGTCT
TTGTAATTCTCCTTCTTCAGGTAGGTGGGTGTAGAAATAGTTAAGATACG
GGTGGGTAGGTCTGGGACTTTATCCTGACTCGTATCGAAGACGGGGTGTC
AAGGCGATCTGTGAGTGGTGTACCTGGCTGGGGATATATGTGAGACCATG
CGTGTGGCATCTGGATGGCCTTAAGAAGAAGAAGTGGGTGCTCAGGTTTG
ATGGTGAGCAATATCAAAGGCCGTAGATCTTGTCTTTTTTTCCTCAGGTC
CTCTTCCCTCCCTCTCCTCCATCCATCTCTCATTCCTCCATCCCTCCCTC
CCCCACCCCTCCAACAGCCTCTTCCCTCCACCTCCTCTTTCTACCCATCA
CGACACACCGCCCCTATTGCCTTTATCTTCGCGCATCCTCGCGTCCCAGG
CATCGCTGGCCTGTTCAGCCGTACCTCAGTCTCCCTCTCACGTCTCTATT
TTCATTCGTGGCCCCATCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAG
ACGCAGTACGACAAACAACTTCATCGTAGCCTGCACCAGCAACACCACCA
GCAGCAGCTACGATTACCATCGTCCTGCCTCCACATGGTATCCACGGGCG
CCAGAAGCAGCAGCAGCAGCGGTACGGCTAGAAGAAGAGCAACGCCCAGG
GGTCAAGATGAGGAGGAGGGAGCGGGAGAGAGGCCGGGGGAGGGGGAGCT
TGACATCTCGTTTACCTCCTCCACCTTCTCGGCAAAGGGGGAAGGGGAGG
AATGGAGTCATGGCGGGGTAGTGCTGAACGAGAGCGAGAGGGCACAGCGC
GGGTACCGCATTTTCAAGACGCGGCAGAAGGAGGACGAGGAAAAGGAGGC
GACGGGGAGGTGGAAGAAGGTCGAGCAGATGAGGGGGAAAGAGTCGGAGG
CGAAGAATAGAGCGCCGAAGGAGGGAGGAGGAGGAGGAGGAGGAGGAGGA
GGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGGGGGGGGGTGGGGGATGG
GAAGGCGAAGGGCGCGGAGGTGGCGATGGCCTCGTCGAGTGAGAAGTGGA
AGGTAGGTGGGTGGGTGACTGCATGTACATGCTCATGCCGTGAGGGGGGG
TTCCGGCGGAGCTCAATGTGCTTATATTAGAGACATAAATATCTGAATAT
CTGTATATGTGCATGTATAGCTCGGTCCATTCCTAACCCCTTCCTGGTGC
ACGCATACCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCC
TCCCTCCCTCCCTCCCTCCCTCTTTTCCTCCCCTGCAAACAGGGTTCTGC
CACTTCTGACGCTGGTGCTATTGTGACTCCCGCCGCTCACAGTGTGCAGG
AGGAGGGGGAATGGATAAAGGGAGGAGAGGTGATTAAGGTGAAGCCGAAT
CAGAACAGGAGGGTGACGATAGTAGAGGAGGAGAGAAAGCAGGAGGAGGA
GGGGATGGAGGAGAGGAGGGAGGAGGAGGGAAGAAGGGAGGAGAAGAGAG
AGAAAGAGCAGGAGGAGAACGAGGAGGAGGAGGAGAGGGAGGAGGAGGAC
GAGGAGGAGGGCGTGATCAATCATTTTGTCGGCATGCTGGTAAACGGGTA
TGATATGTCGGCGGGCGCCTACATGATCTCCACTCCCAAGGAGGAGGGGG
GGAAAGGAGGAGGGGGGAGGAGGCTGGAAGGGGGGGTGGGTAACACAGTC
GAAGGAGGCTGGGGAGGAGGAGAAGAGGAGGGAGTAGGGAGGAGAAGGGG
TGTCACTTTGAGCGGTAAGGAGGTGGTGGGATGGAGGGAGGGAGGGAGGG
AGGGGGGAAGGGCTGCGCTTCATCACTCTTAATGCTTTCAGCAGCTCACC
CTTCATCCTTTCCCCCTCCCTCCCTCCCTCCTTCCCTCCCTCCTTCTCCA
GGCCTGTTTTTCAAGGTGCGAGACCGTTTTTTTCCCAACTTCAACCACGT
GGCCTGGGGAGAGCGTGTCCTCACCCGCCTGGTGAAACGGATGGACAGGT
GGGGAGGGAGGGAGGAAGGGAGGGAGGGAGGGAGGAAGGGAGGAGAGAGG
GCGGGAAAGAGAATGATAGATGACATCCTCCCAATGCATCAGTTCACAAT
CCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTGCTCCTTGCA
GAGAAATCCTCTTGGGCTGCCTCGCCATCGTGGGGCGGGAGCTGGTGATG
CGGGAGGTGGCCGTGCAGATCGCCTCGCTGCCTCCGTCAATGCAGGACAA
GAGCTTCCGGCTCATGAACCGCACCATGGTCAATTTCCAGGACAAGGTCC
GACATGCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCTCTCCCG
CCCTCGCTTCCCACCCCCCCATTGGCCGTGACCGCTGGTGGCCGTTGCTG
CAGGCATCGACATCATCTCACCACTCCCCCCCCCTTCCTCCCTTCCCTCC
CTCCCTCCCTTTCCTCCCTCCCTCCCCTCCCTCCCTCCCTCCCTCCCTCC
CTCCCTCCCTCCCTCCCTCCCTCCCTCCCCTCCCTCCCTCCCTCCCTCCC
TCCCTCCCCCGATCCCTGTCCAGGTCGGCTTCGTCCTGACCAAGGGCGTG
ACGTGGGAGACGGTGTTGCAGCTCGTGCAGGGAGAGCTCAAATCCTTCCG
AGAGGCTGGCATCGACCCGCTCTCCGAGTCTGTGGCGCGAGAGCTGTTTT
TCGTGGCGGCGAGCAGGGTAAAGAGGGAGGGAGGGAGGGATGGGAGGGAG
GGGAGGGAGGGAGAAAGGTCTTCTGGAATCCCCTCTATTTATTTTCGACT
CCCTCCGCTCTTGTGCCGTTATCTTATGCCCGCCGTTGCTTTTCCTCCCC
CCCTCCCTCCCTCCCTCCCCTCACTCCTGCCCTCCCTCCCTCCCTCCCTC
CCTCCCTCCCTCCCACCTCGTCCTCAGGTGTTTCCCGACCTGCCCCTGGA
CGAGTGGAACCGGAACGTGGAGTCTCTGGGCGACAGGACGAGGAAATTTT
GGATGGAGAGCCAGATCAAGGTGGGCAGGGGGAGGGAGGGAGGGAGGGAG
GGAGGGAGGGAAGCGTGGCAAGTGCGGAATGATGGACCGCGGATTCGTCA
ATATCCTTCAACGCCTCTCACGTGGACGTTCCTCCCTCCCTCCTTCCCTC
CCTCCCTTCCTCCCTCCCTCCCTTCCTCCGTTCTTCCCTTACAGATGGAC
GACCTCCTCCCCTCCCCCTACCCCTCCTCATCAAGCGGGCTTCCGTCCTC
CCTTCCCGCCTCCCTGCGCCTCTCCTCCCCCTCCGCCTTCTACACCTCCC
CTCACTCCTCCAACAGCACTTTGGCAGCGGCAGCGGCGGGGAACTACCTC
AAGACATGGCTGGAGAGCCTCGAGGCGGCCCTGGTGCTGGGTAGGGAGGG
AGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGGAAGGGGCAA
AAGAAAAGGATTAAGACGACTCCCACTTTTCTCCCCCTTTTTTCGGAAAA
GACGCCATCTAATCCTTTCCTCCCTCCCTCCAGCCGGCGTAGGTATCGTG
GATGAGAGCGGCAAGACCCCCACCGTGGCTTTGCGTGAGGTGGGTGAAAA
CTTGGAGCGCCTCAAGCACCAGTCAGAAGACCTCCTGTTGCTCGTTGAGG
ACGAGATCAGGTATATCGCTAAGGGAGGAAAGCCGGAGGTAAGGAAGGAC
CGGGGAGGGAAGGAGAGAGAAGGGGAGGAAGGGAGAGAGGGAAGGAGAGG
GGAGGGAGGGAGGGAGGGAGGGAGGGAAGGGGGTAGGGGGGGTAGATCTG
CGTGCTGGAATTCTTCAACAAGGATATTGCGTAAAAGCGCTCTCTTGTAT
AAACGTACAACATATTCACTGCCCACTGAAATCATGTACTTCCCTCTGCT
CTCCTTTCTCCTTGGCAGGTGTCGATGAAGCACCTGGGCGAAAGCGTGAG
AGCCTACGCAGGGGAATACACGCGACTCGTTCCACAGGAGTGGCGGAAGG
CCCTTAATCTCCCCCCACCTCCTCCCCTGCCCCTGCCACCGTACAAGAGG
CGGGCTGAGGAGGTGGAGGAGGTGGAGGAGGTGGGGGAGGAGGAGATCGA
GGCTTTGGTGGGGGATGAGGAGGGGGACTGGTTTTAGATGGCGGAAGTGG
AGGAAAGGGAAGAGGAGAGGGGATTAAGGACGTGATCGCCTCTCCCTCTC
CTCCTTATTGTGTAAATGTCTTGTACAAAGGTAAAAGACGAGTGCGTTGC
ACCTCCCATAAGTACAACGAGAAGAAAAAAGACAAATGGAATGCACATGC
GTTACTTTCTTCGTCATGATCCACACAACCAGAAAAGCAGTGTGTGCCCA
ATCAGGCGATTGACTGACAATGACAAACGACGGAGCAAAGAAGAGAAGAA
ACGTAGGAAATATGTATTCCATTTATGCACTCAGTATCTAAGCGCTCAAG
CCCCCCCCCCCCCGCGGAGATCAATGTAGGAATCAGCCCTCCAAAGACTT
CTGCCTAAGAGAGTTTGACTGCGCGCAGACACTTGTGCGAGGCGATTAGC
TTGACTTGTTCTGTAGCTCTTTGACGCTAAAAGGAAATACTTCACACCTC
ATACCTACCAATTTTATGAGAGACATTTTTCACCTCATTCTGACCGTAAA
ACTCTTTTTATTGGGGGGGGTTGACATGACATCCTTGATTAGCCGTCGTA
AAAATTCTGGCTTGCCCCTCGTAGGAGTACAGGCAAATTCACCAGCTCGG
GCTCCTCCTCCTGTTGCTTCTCATTGTCATCATCGTCAGAGC

Coding sequence (CDS) from alignment at chr11:1132046..1137537+

>NO11G03520.1 ID=NO11G03520.1|Name=NO11G03520.1|organism=Nannochloropsis oceanica|type=CDS|length=2151bp|location=Sequence derived from alignment at chr11:1132046..1137537+ (Nannochloropsis oceanica)
ATGAAGACAAGGCACAAGTACGACGATGACGACCGCCATGATTCGGACCG
CGACAGGCGGAGGAGAAGAAGGAATAACCCGGAGAGTGGCACTAGGAATG
TGATGCTGCCACTGCTAGCGCGGTGGTGGCCTGCCTCGCCTCCAGCTCCT
GTCACTTTTCTGGCGAGCTTGGTCTTTGTAATTCTCCTTCTTCAGCCTCT
TCCCTCCACCTCCTCTTTCTACCCATCACGACACACCGCCCCTATTGCCT
TTATCTTCGCGCATCCTCGCGTCCCAGGCATCGCTGGCCTGTTCAGCCGT
ACCTCAGTCTCCCTCTCACGTCTCTATTTTCATTCGTGGCCCCATCAGCA
GCAGCAGCAGCAGCAGCAGCAGCAGCAGACGCAGTACGACAAACAACTTC
ATCGTAGCCTGCACCAGCAACACCACCAGCAGCAGCTACGATTACCATCG
TCCTGCCTCCACATGGTATCCACGGGCGCCAGAAGCAGCAGCAGCAGCGG
TACGGCTAGAAGAAGAGCAACGCCCAGGGGTCAAGATGAGGAGGAGGGAG
CGGGAGAGAGGCCGGGGGAGGGGGAGCTTGACATCTCGTTTACCTCCTCC
ACCTTCTCGGCAAAGGGGGAAGGGGAGGAATGGAGTCATGGCGGGGTAGT
GCTGAACGAGAGCGAGAGGGCACAGCGCGGGTACCGCATTTTCAAGACGC
GGCAGAAGGAGGACGAGGAAAAGGAGGCGACGGGGAGGTGGAAGAAGGTC
GAGCAGATGAGGGGGAAAGAGTCGGAGGCGAAGAATAGAGCGCCGAAGGA
GGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAG
GAGGAGGAGGGGGGGGGGTGGGGGATGGGAAGGCGAAGGGCGCGGAGGTG
GCGATGGCCTCGTCGAGTGAGAAGTGGAAGGGTTCTGCCACTTCTGACGC
TGGTGCTATTGTGACTCCCGCCGCTCACAGTGTGCAGGAGGAGGGGGAAT
GGATAAAGGGAGGAGAGGTGATTAAGGTGAAGCCGAATCAGAACAGGAGG
GTGACGATAGTAGAGGAGGAGAGAAAGCAGGAGGAGGAGGGGATGGAGGA
GAGGAGGGAGGAGGAGGGAAGAAGGGAGGAGAAGAGAGAGAAAGAGCAGG
AGGAGAACGAGGAGGAGGAGGAGAGGGAGGAGGAGGACGAGGAGGAGGGC
GTGATCAATCATTTTGTCGGCATGCTGGTAAACGGGTATGATATGTCGGC
GGGCGCCTACATGATCTCCACTCCCAAGGAGGAGGGGGGGAAAGGAGGAG
GGGGGAGGAGGCTGGAAGGGGGGGTGGGTAACACAGTCGAAGGAGGCTGG
GGAGGAGGAGAAGAGGAGGGAGTAGGGAGGAGAAGGGGTGTCACTTTGAG
CGGCCTGTTTTTCAAGGTGCGAGACCGTTTTTTTCCCAACTTCAACCACG
TGGCCTGGGGAGAGCGTGTCCTCACCCGCCTGGTGAAACGGATGGACAGA
GAAATCCTCTTGGGCTGCCTCGCCATCGTGGGGCGGGAGCTGGTGATGCG
GGAGGTGGCCGTGCAGATCGCCTCGCTGCCTCCGTCAATGCAGGACAAGA
GCTTCCGGCTCATGAACCGCACCATGGTCAATTTCCAGGACAAGGTCGGC
TTCGTCCTGACCAAGGGCGTGACGTGGGAGACGGTGTTGCAGCTCGTGCA
GGGAGAGCTCAAATCCTTCCGAGAGGCTGGCATCGACCCGCTCTCCGAGT
CTGTGGCGCGAGAGCTGTTTTTCGTGGCGGCGAGCAGGGTGTTTCCCGAC
CTGCCCCTGGACGAGTGGAACCGGAACGTGGAGTCTCTGGGCGACAGGAC
GAGGAAATTTTGGATGGAGAGCCAGATCAAGATGGACGACCTCCTCCCCT
CCCCCTACCCCTCCTCATCAAGCGGGCTTCCGTCCTCCCTTCCCGCCTCC
CTGCGCCTCTCCTCCCCCTCCGCCTTCTACACCTCCCCTCACTCCTCCAA
CAGCACTTTGGCAGCGGCAGCGGCGGGGAACTACCTCAAGACATGGCTGG
AGAGCCTCGAGGCGGCCCTGGTGCTGGGTAGGGAGGGAGGGAGGGAGGGA
GGGAGGGAGGGAGGGAGGGAGGGAGGGGAAGGGGCAAAAGAAAAGGATTA
A

Synonyms

Publications