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Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
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| chr11 | genome | chr11:475365..478147 - |
Analyses
This mRNA is derived from or has results from the following analyses
Homology
BLAST of NO11G01380.1 vs.
Match: EWM25073.1 (cell division protein [Nannochloropsis gaditana]) HSP 1 Score: 736.1 bits (1899), Expect = 7.200e-209 Identity = 404/475 (85.05%), Postives = 430/475 (90.53%), Query Frame = 0
Query: 1 MRPISSPLVCVAAAAGALLLQVGCSSSATMAEAAFLAPASSCITLARSTFIKSKTSLAADAASDVTALS-DIPNSRSLYQQQQLQEQLDLQAQLAAIPDTGSPCRIKVIGVGGGGSNAVNRMVTQDITGVEFWAINTDAQALAKSKVPFKLNIGNHVTRGLGAGGKPIVGRNAAEESREAIAEAVAGADLVFVTAGMGGGTGSGAAPVVAEIAKDLGILTVGVVTRPFGFEGRQRMAQAKSAIQEMQSKVDTLITVSNDRLLQIVPDNFPLTDAFLVADEALRDGVVGISDIIVKPGLINVDFADVRAVMQNAGTALMGTGWGKGKTRAQDAAVSAIKSPLLDFPIKKAKGIVFNVCGGTDLTLGEINAAAQVIYENVADDANIIFGAVVDEKLKDQVSITVLATGFSLDPNGDGDNLDDLLTTLDQQLSAPGRPKRVPQPPPPPPQQQQPAYSTPSPNVSQQPPPMYDESGYEG 475
M P+ P+V + A G LLLQ GCSSSAT+ +AAFLAPA+ I + RS+F SKTSLAADAASD +LS DIPNSRSLYQQQQL++Q L QLAAIPD+GSPCRIKVIGVGGGGSNAVNRMVTQDITGVEFWAINTDAQALAKSKVP+KLNIGNH+TRGLGAGGKP+VGRNAAEESRE IAEAVAGADLVFVTAGMGGGTGSGAAPVVAE+AKDLGILTVGVVTRPFGFEGRQRMAQAK+AIQEMQSKVDTLITVSNDRLLQIVPDNFPLTDAFLVADEALRDGVVGISDIIVKPGLINVDFADVRAVMQNAGTALMGTGWGKGKTRAQDAAVSAIKSPLLDFPIKKAKGIVFNVCGG+DLTLGEINAAAQVIYENVA+DANIIFGAVVD KLKDQVSITVLATGFSL+PN DNLDDLLTTLDQQLS PGRPK P P QQ A+ TP+P SQQPPP+Y+++ EG
Sbjct: 393 MWPLGFPVVRLMAGVGVLLLQSGCSSSATLTKAAFLAPATG-INVKRSSFYGSKTSLAADAASDAASLSRDIPNSRSLYQQQQLEQQRALHEQLAAIPDSGSPCRIKVIGVGGGGSNAVNRMVTQDITGVEFWAINTDAQALAKSKVPYKLNIGNHITRGLGAGGKPLVGRNAAEESREEIAEAVAGADLVFVTAGMGGGTGSGAAPVVAEVAKDLGILTVGVVTRPFGFEGRQRMAQAKAAIQEMQSKVDTLITVSNDRLLQIVPDNFPLTDAFLVADEALRDGVVGISDIIVKPGLINVDFADVRAVMQNAGTALMGTGWGKGKTRAQDAAVSAIKSPLLDFPIKKAKGIVFNVCGGSDLTLGEINAAAQVIYENVAEDANIIFGAVVDAKLKDQVSITVLATGFSLNPNASEDNLDDLLTTLDQQLSGPGRPKGAAS--PTPSSMQQSAFPTPTP-PSQQPPPVYEKTYSEG 863
The following BLAST results are available for this feature:
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >NO11G01380.1 ID=NO11G01380.1|Name=NO11G01380.1|organism=Nannochloropsis oceanica|type=mRNA|length=2783bp
TTCTGTTGTAATCGGTTTTTACTCTCTCGGACGAGGCATCGCTCGCCTAA
CACTCAAGCTCGAAATTAGACCCGTGGCTTTCGTGAAGACTTGCCTGCCA
CTCTCGCAGAGTGCAGGCACTGGAGACGCAAGTTTTGCCCACGCAACAAA
AGTGTCAAGAATGGGAAGGGATTATTTTCTGTGCATTCACCCTGGCAGCC
AGGAGGCTAAGTGGTGCCCCTGCCTTGAGGCAGTCCCTCATTTTCTGCCT
ACACTAGAACACACACCGCATCACCGACTCAGGCCGGACGAGAAGTAAAT
ATGCTTATGAACAGGCGTGGTGGAGAGGTCGCCATGTTCAAGGCAGGCGT
GAACTGGGGATCGCAAAGCATGGAGGAAGAAAACGACTGGGATTGAGGTG
GTCTGCCGTCCCGTGTCTTATCACTTCCCGTCCCCCTCCCCCTCAAAACC
ACAGATCGCCTCTTCTCAGCCACCACACGTGAGATACGACAGTCCATCAC
CCATCCATGCGACCAATCAGCTCCCCCCTCGTGTGCGTCGCGGCGGCCGC
AGGTGCCCTTCTTCTCCAGGTTGGTTGTTCTTCTTCCGCTACCATGGCCG
AGGCCGCTTTTTTGGCCCCGGCATCCAGCTGCATCACCCTTGCACGCAGC
ACCTTCATCAAGTCTAAAACCAGTCTCGCGGCCGACGCAGCCTCGGACGT
GACTGCTCTCTCTGACATCCCCAATAGCCGGAGCCTATACCAGCAACAGC
AGCTCCAGGAGCAACTTGACCTGCAAGCGCAGTTGGCTGCCATTCCCGAC
ACGGGATCGCCGTGCCGCATCAAAGTCATTGGTGTGGGTGGGGGAGGAAG
CAATGCGGTGAATCGCATGGTGACGCAAGACATTACAGGGGTGGAATTCT
GGGCTATTAACACCGACGCGCAAGCCTTGGCGAAGTCCAAGGTGCCTTTC
AAGCTCAACATCGGTAATCACGTCACCCGTGGTCTGGGCGCCGGCGGCAA
GCCTATCGTAGGACGAAATGCTGCAGAAGAGTCAAGGGAGGCAATTGCTG
AGGCAGTGGCGGGGGCAGATTTAGTGTTTGTCACTGCGGGGATGGGAGGA
GGGACGGGCTCGGGTGCTGCGCCGGTGGTGGCGGAAATTGCGAAAGATCT
TGGCATTTTGACGGTGGGTGTGGTGACGCGTCCCTTTGGCTTCGAAGGGC
GGCAGAGGATGGCTCAGGCGAAGTCGGCGATTCAGGAGATGCAGAGTAAG
GTGGATACGTTGATCACGGTTAGCAACGATAGGTTACTGCAAATAGTACC
AGACAACTTCCCGTTGACCGACGCGTTTTTGGTGGCAGACGAGGCCTTGA
GGGATGGCGTGGTTGGAATTTCGGACATCATTGTCAAACCGGGTCTGATC
AATGTTGATTTTGCGGATGTCCGCGCGGTGATGCAGAATGCTGGAACGGC
GCTGATGGGGACTGGTTGGGGCAAGGGGAAGACAAGGGCGCAGGATGCCG
CAGTGAGTGCGATTAAAAGCCCTTTGCTCGATTTTCCCATTAAAAAAGCA
AAAGGGATCGTGTTCAATGTGTGTGGAGGCACGGATTTGACTCTGGGGGA
GATCAACGCAGCGGCGCAGGTGATTTATGAGAATGTGGCTGATGACGCCA
ACATCATTTTCGGCGCTGTAGTAGACGAAAAGCTCAAGGATCAAGTTTCG
ATTACTGTTCTCGCTACTGGTTTCTCCCTCGACCCCAACGGCGATGGTGA
CAACCTTGACGACCTTCTTACCACTCTCGACCAGCAGCTCTCTGCTCCCG
GCCGCCCCAAGCGTGTGCCGCAACCGCCGCCGCCGCCACCGCAGCAGCAA
CAACCGGCTTACTCCACCCCTTCTCCCAACGTCTCGCAGCAGCCTCCTCC
CATGTATGACGAATCGGGATATGAGGGGGCTGGAGCGCCGGGTGTCAAGG
GCGGGAAGGAAGCAGGGAAGGGAGGTGTCGGTCGGTTTTTCAAGCTGTTT
CGGAGATCGTAGATAGTGAGTATGATTGTTAATCGATTGATTGATTTATT
AAAATGAGGAAAGAAGATGCCGTTCAGGGAGGGAAGTGAAAAATGTGAAG
CAGCAGCAGTCATACCAAGATCGCTTGGAGCTTGGTGGAAGGGGCGCGCG
AAGAGAATTGTGAGAAGGGGAATACAAGTAGGAAAGGCCTGAAGGAACGG
TAGAGAAAACAGAGGACGGGAAGCCGTCAGGAGGTATCGTTGCGAAGCAG
CCAAAAAAGAGTATAAGAAGAAGTAGTAAAGGAGGGAAGAAAGGAGGGAA
GGGAGGGGGGAAGGAGGGACGGAACCAGAGTACCTACATGTGTTGTCTTC
TTCAGGTCAGTTTCCATGTTAGTTATTCTCTCCCCCTATTTTTTTGTTTC
GTTTTGTGCGCTGTAGATAGATAAAGTCATTTCCCCCGTTCCAATTCGGC
AAGATTTGGCACCATTCCTATTTCCTCCTACCCACACATAACGCGTCAGT
AAGCATCATTCCTGAGGGATATAGGATGAGGAACTTCCGTCGGCAGCACC
GACGACGGCTTGCGGTCTCTCCTCTGATGTGTCTTCTTTCGTCTTCACTC
AACGGCAGTAGGCTGATTGTCCAGTGTTGTTTGTAGGTGCTTCCTTCCTT
GAGCGGTGTCTTGGAGAGAGAGAGGGCGCAGGAGTATGGAGGGCCGGAGC
TTACAGAAACCTAAAAGAGAAAGAAAGAAAGTGTTAAGTTTGAAACAGAA
GCAATAAAAAGCAAGACAGCCTATGAGCGAGAT back to topprotein sequence of NO11G01380.1 >NO11G01380.1-protein ID=NO11G01380.1-protein|Name=NO11G01380.1|organism=Nannochloropsis oceanica|type=polypeptide|length=502bp
MRPISSPLVCVAAAAGALLLQVGCSSSATMAEAAFLAPASSCITLARSTF
IKSKTSLAADAASDVTALSDIPNSRSLYQQQQLQEQLDLQAQLAAIPDTG
SPCRIKVIGVGGGGSNAVNRMVTQDITGVEFWAINTDAQALAKSKVPFKL
NIGNHVTRGLGAGGKPIVGRNAAEESREAIAEAVAGADLVFVTAGMGGGT
GSGAAPVVAEIAKDLGILTVGVVTRPFGFEGRQRMAQAKSAIQEMQSKVD
TLITVSNDRLLQIVPDNFPLTDAFLVADEALRDGVVGISDIIVKPGLINV
DFADVRAVMQNAGTALMGTGWGKGKTRAQDAAVSAIKSPLLDFPIKKAKG
IVFNVCGGTDLTLGEINAAAQVIYENVADDANIIFGAVVDEKLKDQVSIT
VLATGFSLDPNGDGDNLDDLLTTLDQQLSAPGRPKRVPQPPPPPPQQQQP
AYSTPSPNVSQQPPPMYDESGYEGAGAPGVKGGKEAGKGGVGRFFKLFRR
S* back to topmRNA from alignment at chr11:475365..478147- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >NO11G01380.1 ID=NO11G01380.1|Name=NO11G01380.1|organism=Nannochloropsis oceanica|type=mRNA|length=2783bp|location=Sequence derived from alignment at chr11:475365..478147- (Nannochloropsis oceanica)
TTCTGTTGTAATCGGTTTTTACTCTCTCGGACGAGGCATCGCTCGCCTAA
CACTCAAGCTCGAAATTAGACCCGTGGCTTTCGTGAAGACTTGCCTGCCA
CTCTCGCAGAGTGCAGGCACTGGAGACGCAAGTTTTGCCCACGCAACAAA
AGTGTCAAGAATGGGAAGGGATTATTTTCTGTGCATTCACCCTGGCAGCC
AGGAGGCTAAGTGGTGCCCCTGCCTTGAGGCAGTCCCTCATTTTCTGCCT
ACACTAGAACACACACCGCATCACCGACTCAGGCCGGACGAGAAGTAAAT
ATGCTTATGAACAGGCGTGGTGGAGAGGTCGCCATGTTCAAGGCAGGCGT
GAACTGGGGATCGCAAAGCATGGAGGAAGAAAACGACTGGGATTGAGGTG
GTCTGCCGTCCCGTGTCTTATCACTTCCCGTCCCCCTCCCCCTCAAAACC
ACAGATCGCCTCTTCTCAGCCACCACACGTGAGATACGACAGTCCATCAC
CCATCCATGCGACCAATCAGCTCCCCCCTCGTGTGCGTCGCGGCGGCCGC
AGGTGCCCTTCTTCTCCAGGTTGGTTGTTCTTCTTCCGCTACCATGGCCG
AGGCCGCTTTTTTGGCCCCGGCATCCAGCTGCATCACCCTTGCACGCAGC
ACCTTCATCAAGTCTAAAACCAGTCTCGCGGCCGACGCAGCCTCGGACGT
GACTGCTCTCTCTGACATCCCCAATAGCCGGAGCCTATACCAGCAACAGC
AGCTCCAGGAGCAACTTGACCTGCAAGCGCAGTTGGCTGCCATTCCCGAC
ACGGGATCGCCGTGCCGCATCAAAGTCATTGGTGTGGGTGGGGGAGGAAG
CAATGCGGTGAATCGCATGGTGACGCAAGACATTACAGGGGTGGAATTCT
GGGCTATTAACACCGACGCGCAAGCCTTGGCGAAGTCCAAGGTGCCTTTC
AAGCTCAACATCGGTAATCACGTCACCCGTGGTCTGGGCGCCGGCGGCAA
GCCTATCGTAGGACGAAATGCTGCAGAAGAGTCAAGGGAGGCAATTGCTG
AGGCAGTGGCGGGGGCAGATTTAGTGTTTGTCACTGCGGGGATGGGAGGA
GGGACGGGCTCGGGTGCTGCGCCGGTGGTGGCGGAAATTGCGAAAGATCT
TGGCATTTTGACGGTGGGTGTGGTGACGCGTCCCTTTGGCTTCGAAGGGC
GGCAGAGGATGGCTCAGGCGAAGTCGGCGATTCAGGAGATGCAGAGTAAG
GTGGATACGTTGATCACGGTTAGCAACGATAGGTTACTGCAAATAGTACC
AGACAACTTCCCGTTGACCGACGCGTTTTTGGTGGCAGACGAGGCCTTGA
GGGATGGCGTGGTTGGAATTTCGGACATCATTGTCAAACCGGGTCTGATC
AATGTTGATTTTGCGGATGTCCGCGCGGTGATGCAGAATGCTGGAACGGC
GCTGATGGGGACTGGTTGGGGCAAGGGGAAGACAAGGGCGCAGGATGCCG
CAGTGAGTGCGATTAAAAGCCCTTTGCTCGATTTTCCCATTAAAAAAGCA
AAAGGGATCGTGTTCAATGTGTGTGGAGGCACGGATTTGACTCTGGGGGA
GATCAACGCAGCGGCGCAGGTGATTTATGAGAATGTGGCTGATGACGCCA
ACATCATTTTCGGCGCTGTAGTAGACGAAAAGCTCAAGGATCAAGTTTCG
ATTACTGTTCTCGCTACTGGTTTCTCCCTCGACCCCAACGGCGATGGTGA
CAACCTTGACGACCTTCTTACCACTCTCGACCAGCAGCTCTCTGCTCCCG
GCCGCCCCAAGCGTGTGCCGCAACCGCCGCCGCCGCCACCGCAGCAGCAA
CAACCGGCTTACTCCACCCCTTCTCCCAACGTCTCGCAGCAGCCTCCTCC
CATGTATGACGAATCGGGATATGAGGGGGCTGGAGCGCCGGGTGTCAAGG
GCGGGAAGGAAGCAGGGAAGGGAGGTGTCGGTCGGTTTTTCAAGCTGTTT
CGGAGATCGTAGATAGTGAGTATGATTGTTAATCGATTGATTGATTTATT
AAAATGAGGAAAGAAGATGCCGTTCAGGGAGGGAAGTGAAAAATGTGAAG
CAGCAGCAGTCATACCAAGATCGCTTGGAGCTTGGTGGAAGGGGCGCGCG
AAGAGAATTGTGAGAAGGGGAATACAAGTAGGAAAGGCCTGAAGGAACGG
TAGAGAAAACAGAGGACGGGAAGCCGTCAGGAGGTATCGTTGCGAAGCAG
CCAAAAAAGAGTATAAGAAGAAGTAGTAAAGGAGGGAAGAAAGGAGGGAA
GGGAGGGGGGAAGGAGGGACGGAACCAGAGTACCTACATGTGTTGTCTTC
TTCAGGTCAGTTTCCATGTTAGTTATTCTCTCCCCCTATTTTTTTGTTTC
GTTTTGTGCGCTGTAGATAGATAAAGTCATTTCCCCCGTTCCAATTCGGC
AAGATTTGGCACCATTCCTATTTCCTCCTACCCACACATAACGCGTCAGT
AAGCATCATTCCTGAGGGATATAGGATGAGGAACTTCCGTCGGCAGCACC
GACGACGGCTTGCGGTCTCTCCTCTGATGTGTCTTCTTTCGTCTTCACTC
AACGGCAGTAGGCTGATTGTCCAGTGTTGTTTGTAGGTGCTTCCTTCCTT
GAGCGGTGTCTTGGAGAGAGAGAGGGCGCAGGAGTATGGAGGGCCGGAGC
TTACAGAAACCTAAAAGAGAAAGAAAGAAAGTGTTAAGTTTGAAACAGAA
GCAATAAAAAGCAAGACAGCCTATGAGCGAGAT back to topCoding sequence (CDS) from alignment at chr11:475365..478147- >NO11G01380.1 ID=NO11G01380.1|Name=NO11G01380.1|organism=Nannochloropsis oceanica|type=CDS|length=1506bp|location=Sequence derived from alignment at chr11:475365..478147- (Nannochloropsis oceanica)
ATGCGACCAATCAGCTCCCCCCTCGTGTGCGTCGCGGCGGCCGCAGGTGC
CCTTCTTCTCCAGGTTGGTTGTTCTTCTTCCGCTACCATGGCCGAGGCCG
CTTTTTTGGCCCCGGCATCCAGCTGCATCACCCTTGCACGCAGCACCTTC
ATCAAGTCTAAAACCAGTCTCGCGGCCGACGCAGCCTCGGACGTGACTGC
TCTCTCTGACATCCCCAATAGCCGGAGCCTATACCAGCAACAGCAGCTCC
AGGAGCAACTTGACCTGCAAGCGCAGTTGGCTGCCATTCCCGACACGGGA
TCGCCGTGCCGCATCAAAGTCATTGGTGTGGGTGGGGGAGGAAGCAATGC
GGTGAATCGCATGGTGACGCAAGACATTACAGGGGTGGAATTCTGGGCTA
TTAACACCGACGCGCAAGCCTTGGCGAAGTCCAAGGTGCCTTTCAAGCTC
AACATCGGTAATCACGTCACCCGTGGTCTGGGCGCCGGCGGCAAGCCTAT
CGTAGGACGAAATGCTGCAGAAGAGTCAAGGGAGGCAATTGCTGAGGCAG
TGGCGGGGGCAGATTTAGTGTTTGTCACTGCGGGGATGGGAGGAGGGACG
GGCTCGGGTGCTGCGCCGGTGGTGGCGGAAATTGCGAAAGATCTTGGCAT
TTTGACGGTGGGTGTGGTGACGCGTCCCTTTGGCTTCGAAGGGCGGCAGA
GGATGGCTCAGGCGAAGTCGGCGATTCAGGAGATGCAGAGTAAGGTGGAT
ACGTTGATCACGGTTAGCAACGATAGGTTACTGCAAATAGTACCAGACAA
CTTCCCGTTGACCGACGCGTTTTTGGTGGCAGACGAGGCCTTGAGGGATG
GCGTGGTTGGAATTTCGGACATCATTGTCAAACCGGGTCTGATCAATGTT
GATTTTGCGGATGTCCGCGCGGTGATGCAGAATGCTGGAACGGCGCTGAT
GGGGACTGGTTGGGGCAAGGGGAAGACAAGGGCGCAGGATGCCGCAGTGA
GTGCGATTAAAAGCCCTTTGCTCGATTTTCCCATTAAAAAAGCAAAAGGG
ATCGTGTTCAATGTGTGTGGAGGCACGGATTTGACTCTGGGGGAGATCAA
CGCAGCGGCGCAGGTGATTTATGAGAATGTGGCTGATGACGCCAACATCA
TTTTCGGCGCTGTAGTAGACGAAAAGCTCAAGGATCAAGTTTCGATTACT
GTTCTCGCTACTGGTTTCTCCCTCGACCCCAACGGCGATGGTGACAACCT
TGACGACCTTCTTACCACTCTCGACCAGCAGCTCTCTGCTCCCGGCCGCC
CCAAGCGTGTGCCGCAACCGCCGCCGCCGCCACCGCAGCAGCAACAACCG
GCTTACTCCACCCCTTCTCCCAACGTCTCGCAGCAGCCTCCTCCCATGTA
TGACGAATCGGGATATGAGGGGGCTGGAGCGCCGGGTGTCAAGGGCGGGA
AGGAAGCAGGGAAGGGAGGTGTCGGTCGGTTTTTCAAGCTGTTTCGGAGA
TCGTAG back to top
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