NO11G00610.1, NO11G00610.1 (mRNA) Nannochloropsis oceanica

Overview
NameNO11G00610.1
Unique NameNO11G00610.1
TypemRNA
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length4368
Alignment locationchr11:258631..263196 +

Link to JBrowse

Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr11genomechr11:258631..263196 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. oceanica IMET12017-10-24
Homology annotation for N. oceanica IMET12017-10-25
InterPro analysis for N. oceanica IMET12017-10-25
Annotated Terms
Homology
BLAST of NO11G00610.1 vs.
Match: EWM25160.1 (protein kinase domain containing protein [Nannochloropsis gaditana])

HSP 1 Score: 516.9 bits (1330), Expect = 1.600e-142
Identity = 263/380 (69.21%), Postives = 301/380 (79.21%), Query Frame = 0
Query:    6 CLADFDILETLGSGSFSTVFRARPRSSPSLPIVLKETRSLSSSAVTRANVAREVEMLKIAVGCPYISRFYAAFTGNDHHYMVLECIPGGDLLKTVQKCMATKSPPDEATLWRYLYELGQGVAFLHRAGIVHRDIKCQNIMLTNTGHVKLIDLGLAAHLVEGEELQERCGTPFYMAVEMIRKQPYDHRVDVWSVGCVLYMLAQLRPAFNGTTLPQLCRSIVDDAPLPLCGKRYSPYLSHLILGMLDKRREARPRMEEVLSHPVFAHYPHFPPTIFKQPFQTEAMALGLGSLDLTGNTGMLLELGAGREGGREGGREGGLL----ADGGGAPGGVCVTGAGTLVEKAVAAAAAGREGGGRGVSGAGPGQEHHYVQCLPVQQQ 382
            CLADFDILETLG GSFSTVF+ARPR   S  +VLKETRSLS+SA+TRANV RE+EMLK A GCPYIS F+AAF GND+HYM+LECI GGDLLKTVQ+CM +K+PPDEATLW+Y++ELGQG+ FLHR GIVHRD+KCQNIMLT +GHVKLIDLGLAA L  G+EL ERCGTPFYMA+EMI K PYDHRVDVWS GCV YMLAQLRPAFNGTTLPQLC+SI++DAP PLC +RYS  LSHLILGMLDKRR  RP ME+VLSHPVF HYP+FPPTIFKQPFQTE +ALGLGSLDLTG+TG L+EL A    G+E  RE G+L    AD G      CVTGAG+++ +   A  A   G     +   PG     +   P+ +Q
Sbjct:    6 CLADFDILETLGCGSFSTVFKARPRCGKSFDVVLKETRSLSASAITRANVLREMEMLKAARGCPYISHFHAAFQGNDNHYMILECITGGDLLKTVQQCMESKTPPDEATLWKYIFELGQGLIFLHRKGIVHRDVKCQNIMLTGSGHVKLIDLGLAASLQPGQELTERCGTPFYMAIEMINKDPYDHRVDVWSAGCVFYMLAQLRPAFNGTTLPQLCQSILNDAPPPLCSRRYSSNLSHLILGMLDKRRGCRPWMEDVLSHPVFGHYPNFPPTIFKQPFQTEEVALGLGSLDLTGDTGTLVELVARSLSGKE--RENGVLGLEKADHG------CVTGAGSVLRR-FGAPTAAPSGDANDEAKRRPGPHRPLIAHEPMGEQ 376          
The following BLAST results are available for this feature:
BLAST of NO11G00610.1 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 1
Match NameE-valueIdentityDescription
EWM25160.11.600e-14269.21protein kinase domain containing protein [Nannochl... [more]
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
NO11G00610NO11G00610Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
NO11G00610.1NO11G00610.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
NO11G00610.1.cds1NO11G00610.1.cds1Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO11G00610.1.cds2NO11G00610.1.cds2Nannochloropsis oceanica (N. oceanica IMET1)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>NO11G00610.1 ID=NO11G00610.1|Name=NO11G00610.1|organism=Nannochloropsis oceanica|type=mRNA|length=4368bp
ATGGAGAAGACCTACTGCCTCGCGGACTTTGACATCCTTGAAACCCTGGG
CTCCGGGTCTTTCTCCACCGTCTTCCGAGCCCGTCCCCGCTCCTCCCCTT
CCCTGCCCATCGTCCTGAAGGAGACCCGTTCCCTCAGCAGCAGCGCCGTC
ACCCGGGCTAATGTGGCACGGGAAGTGGAGATGCTCAAGATTGCAGTCGG
CTGCCCGTACATTTCTCGGTTCTACGCGGCGTTTACGGGCAACGATCATC
ACTATATGGTGCTTGAGTGTATTCCAGGAGGGGATCTCCTCAAGACTGTG
CAGAAATGCATGGCCACCAAGAGCCCCCCGGACGAGGCAACCCTGTGGCG
GTACCTTTACGAACTCGGGCAGGGGGTGGCTTTCCTCCATCGTGCGGGGA
TCGTTCATCGCGATATTAAATGTCAAAATATCATGCTAACAAACACGGGG
CACGTGAAATTGATTGACCTTGGATTGGCAGCACATTTGGTGGAAGGAGA
GGAGTTGCAGGAGAGGTGTGGGACGCCGTTCTACATGGCGGTGGAGATGA
TTCGAAAGCAGCCATACGACCACCGGGTCGATGTATGGAGCGTTGGTTGT
GTCCTCTACATGCTGGCTCAGCTACGACCGGCATTCAATGGCACGACATT
GCCGCAGTTGTGTCGGTCGATAGTAGATGATGCCCCCCTACCCTTGTGTG
GGAAGCGATACAGCCCGTACCTGTCGCATTTGATTTTGGGGATGCTGGAC
AAACGGAGGGAGGCGAGACCTAGGATGGAGGAGGTGCTATCTCATCCTGT
GTTTGCGCACTACCCTCATTTCCCCCCAACAATTTTCAAGCAGCCGTTTC
AGACGGAGGCGATGGCCCTTGGGCTGGGAAGTTTGGACTTGACAGGGAAT
ACGGGGATGCTGTTGGAGTTGGGGGCAGGGAGGGAGGGAGGGAGGGAGGG
AGGGAGGGAGGGGGGATTGCTTGCTGATGGAGGCGGTGCTCCGGGAGGGG
TTTGTGTGACTGGTGCAGGTACATTGGTGGAGAAGGCGGTGGCTGCGGCG
GCGGCAGGCAGAGAAGGAGGAGGAAGAGGGGTAAGTGGAGCAGGACCAGG
ACAAGAGCACCATTATGTGCAGTGCCTGCCCGTCCAGCAGCAGATGCAGC
AACATCAGCATAAGCAGCAAGTCACCGCCTCCTACCCTTTCAATCACCAC
CAATATCAATATCAACAGCATTTCCTACAGCATTTGCAGCAGCAGCAGCA
GCAACAGCAGCAGCAACAGCAGCAGCAGCAGCTACTTCATCCAACGGCTT
TTCCCCCAGGGCCTCTGATGGGCGATCCTCCCGCGGAAGAAGACGACAAC
GAAAAGGCAGAGGGAAGAGACGACATGTTCAAGGACCTCCCTCCCTCTCT
TCCTCTTCTTGCGCTGGCAGATTCCGAGCAAGTCAATGTTTATGACAGCG
AGCTCTTCAATAATCCTCCCTTCTCTTCATGCTCCACGCCTCGTCCTTTC
TCCTCCGCTTCCTCACCCGCGCCCCTATTTGAAGGCCAGAGGGGTGAGGT
AGGTTTGCCCATCTACCAATCACTATCCCACTTACCCTCCTCATTTATGC
TCCGGCAGCAGCAGCAGCAGCAGCAGCAACAACAACAACAACAGCAACAG
CAGCAGCAGCAGCAGCAGCCACAGCCACCGCCGCAGCAGCAACAGCAGTC
GCAACAACAGCAGCAGGAGGAGCAGCCGCAGCCAGAACAACAAGAGGGGT
TGATAGCGGGACAGCGGATCACGGACTATCCACAGCTTCTTCTCCGAATA
CCGTCCTTCTCCTCCTCCTCTCCCATCTCCACCCTCTCCTCTCCCGTCGC
ATCCTTCTCTAGCAGCCCACCGCCCTCCCACACAAGCTCAACATACGCCT
CTTTTGCCATAATACACGCTCGAATTGAGGGACATGACAGCTCCAGCCCT
TCCTCCCCCTCGTTCTCGTCCTCGTCCTCCGCTGGAGCCCGTCGCCTCAT
CCGCCCTGGGTTCCTTGGCAAGGCCTCTCCACGTGTCCGAGACCTGTTGC
ACTATAGCAGCAGTAGCAGCAGAAACACACCGCATCGACAGGGCTCCCCC
TCACAGAAGCGGACTCTTGTTGAGCTGGACGGCGACATTCCTTCCTACTG
CTCCTCCCCCCGTTCCTCCTCCTCCTCCTTCTCCTGTCACTCCTCCTTCC
AGCGGCAGCAGCAGCACCACCATCAAACCTTAAGTTACATCAGCAGCAAC
CACAACATCTGCAACAGCAGTTTTCTCGCTGCTGGTGTCTCTTCTGGTCG
TAGTATTGATGCTGCTGCTGCTGCTGCTGCTGCTGCTGTGAGCGCGAACG
GCTGCGAACGGAGCGAGAGTTTGTCGTCAATGACAGGAGAAGGACTCCAT
CTCGAAAGAGGGCCAGAGGGACTTAAGAGGAGCAGATTAATGACTGAATT
GAAAGTGGAACGAACACATTCTTCCCCTGGACGTCTTATGGAGAATCAAT
TTGCGATTTTCCCGAAGAGAGGGCTGGAAGAGGGAGGAAGGGAGGGGGAG
GGGGAGGGGCATGGTCAGATGGGGCAGCAGCGGATAATGGAACATAAGGA
GATAGAGGAGGAGGAAGAAGAGCAGGATAGGCGGGCACGAAAGGATGGAG
GTAAAGAGGGATTACAATTGCAGGTCGTGAAAAATGGTGCACCTTTGTCC
ACAACATCGGGAGGGAGGCCTGTGGCGATCGATGCATGCGTGAGCAACAC
AAGCCTGGCTTCCTCCCCCATCACCGCGACCTTTGCCTCGCCGTCGTCTT
GCTCCTCGTCCTCCGTCCATTCCTCCCCGCATCATTTCGTGCGCACCCTC
TTGTCCGGCATTGCGATTGGTGGTCGGGGGGGGGAAATGAGCGATGAGAG
CTTCGCCTCCTCCTTCTCCTGCTCTTCTTCCTCCTTCTACTTATTCAACG
ACGCGGGTACGGAAAGAGGAGGTGAAGGAAGAGAAGAAGAAGAAAGAAGA
AGAGGAGAAGGAGGAGGAGAAAGAGGAGAGGGAAGAGAAGAACGAGATGG
AGATGGAAGAGGAGGAGGAAGAGGAGGCGGAGGAGGCGGAGGAGGCGGAG
GAGGAGGAGGAGGAGGAGAAAAAAGAGGAAGAAGGGGAAGAGGAACGGAC
TATCTCCCGATTTCGCAGCTAAACCCGCACCAACAGAGGAGTTTAGATAT
AATCTCGGCGCCACAGTGCTCATGGGCAGTAGGGACTGCGGGCTCGCTTC
CAGGGACACCCTTGCGGCAGCAGTGGACAAAGACAGGAGGTCGGTTGCAG
GGGTGTGATTTTGGAGGAGGAGGAGGAGGGGAAGAAGGACTGAAGAAGCG
AACACATCGTCGAAGTGTGGCTGTAGTGCATGCTGCAGGGGGACTGCCGG
GAGTGGTAACGGCGGGAGAAGGGGAGGTAGGGAGCGGAAGTTGAACTTCT
GCGAGAAGTAAAGGGAAGGGAGAAGAGGAGGAGGGTGTAAAATACAAAAC
ACAATACAATATTACATACAAAGTGTGAAATAGCGAGCAAATTTGATAGT
TCATGATATGTAAGAATATGGCTTAGAGATCGCGAATAATAGAAATATAC
ACATTTATTCGTAAAGCACAACGAAGTCAATGGGAACAGTGAATATGAAA
GAGTCTTAGATCCCCATCACCCTGTATACGCCTCATGTGTGTGCGCTCGG
AAGACAGAGAAATAGTTGGCTACTTCTCTGTGTAGACATGTCTCTTGTCA
ATGCATGCGTGGGTACGTGTGTAAACAACCAATCAAGTCCACCATTTTAT
ATTCAAAGCACCAATTATTTTATTTCTTACAATAACGAGCAAAAAACGAA
AGCTGGATGAAAACCACCCAGTAATTAGTAAAGTAAGAAGGCAAGTACGA
ATTTTAATCCCCACTTGACAGCTGGAAAGAGGACGAGCTGCAGTACGGAG
CAGAGGAGCAACGTAAGGCACGCCTGCTGACGCTCGACCGAAAGGGAAAT
CCACTTCAACCGATCAAGAGGCAGGTCTGCTGACAAAGGGGGGGAAAAGC
GAACAAAAGTGTTAGAAAATAAAGTGTGGGGACTCGAGACATAACTTCGA
AGGGTGCGAGTTTGTCGTAGGCCGAGTCGTTGAATGGTAGTGATGGTGAC
ACTGTGCATGTGAGTAATGACGATTGTGTTGTTATGTTTGAATGGATAAC
ACATGCCTTCCCGCACAAAAACTTGAAACAGAATCACGGTTGAATGAGTT
TGGGAAAGCGGGAACAAGAAACAAAACACAGAGGATTAAAGAGAAGGCTG
CAAGCAAGCGTAAAGAGAGGAAATATAAAATGGGAAGGGACCAACAAGGG
AACAATTTTTATAGTATA
back to top

protein sequence of NO11G00610.1

>NO11G00610.1-protein ID=NO11G00610.1-protein|Name=NO11G00610.1|organism=Nannochloropsis oceanica|type=polypeptide|length=1148bp
MEKTYCLADFDILETLGSGSFSTVFRARPRSSPSLPIVLKETRSLSSSAV
TRANVAREVEMLKIAVGCPYISRFYAAFTGNDHHYMVLECIPGGDLLKTV
QKCMATKSPPDEATLWRYLYELGQGVAFLHRAGIVHRDIKCQNIMLTNTG
HVKLIDLGLAAHLVEGEELQERCGTPFYMAVEMIRKQPYDHRVDVWSVGC
VLYMLAQLRPAFNGTTLPQLCRSIVDDAPLPLCGKRYSPYLSHLILGMLD
KRREARPRMEEVLSHPVFAHYPHFPPTIFKQPFQTEAMALGLGSLDLTGN
TGMLLELGAGREGGREGGREGGLLADGGGAPGGVCVTGAGTLVEKAVAAA
AAGREGGGRGVSGAGPGQEHHYVQCLPVQQQMQQHQHKQQVTASYPFNHH
QYQYQQHFLQHLQQQQQQQQQQQQQQQLLHPTAFPPGPLMGDPPAEEDDN
EKAEGRDDMFKDLPPSLPLLALADSEQVNVYDSELFNNPPFSSCSTPRPF
SSASSPAPLFEGQRGEVGLPIYQSLSHLPSSFMLRQQQQQQQQQQQQQQQ
QQQQQQPQPPPQQQQQSQQQQQEEQPQPEQQEGLIAGQRITDYPQLLLRI
PSFSSSSPISTLSSPVASFSSSPPPSHTSSTYASFAIIHARIEGHDSSSP
SSPSFSSSSSAGARRLIRPGFLGKASPRVRDLLHYSSSSSRNTPHRQGSP
SQKRTLVELDGDIPSYCSSPRSSSSSFSCHSSFQRQQQHHHQTLSYISSN
HNICNSSFLAAGVSSGRSIDAAAAAAAAAVSANGCERSESLSSMTGEGLH
LERGPEGLKRSRLMTELKVERTHSSPGRLMENQFAIFPKRGLEEGGREGE
GEGHGQMGQQRIMEHKEIEEEEEEQDRRARKDGGKEGLQLQVVKNGAPLS
TTSGGRPVAIDACVSNTSLASSPITATFASPSSCSSSSVHSSPHHFVRTL
LSGIAIGGRGGEMSDESFASSFSCSSSSFYLFNDAGTERGGEGREEEERR
RGEGGGERGEGREERDGDGRGGGRGGGGGGGGGGGGGGGEKRGRRGRGTD
YLPISQLNPHQQRSLDIISAPQCSWAVGTAGSLPGTPLRQQWTKTGGRLQ
GCDFGGGGGGEEGLKKRTHRRSVAVVHAAGGLPGVVTAGEGEVGSGS*
back to top

mRNA from alignment at chr11:258631..263196+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>NO11G00610.1 ID=NO11G00610.1|Name=NO11G00610.1|organism=Nannochloropsis oceanica|type=mRNA|length=4566bp|location=Sequence derived from alignment at chr11:258631..263196+ (Nannochloropsis oceanica)
ATGGAGAAGACCTACTGCCTCGGTATGTAGTTGTGGACTTTCTGGTGACC TACATTTTTTTCTTCTCCAACCGGCCTTCTTACGCAGGAAATTAAAAGGG AGGTCTTCTTCAAAATTGTATCAGGATACACAGCCCCCCCCATCCTCACC CCCTCCCCCCATCCATCTTGTCTCATTTATTCCTCCCTCCTTCTCTCCCC CCTAATTTCCTCTGGCACAGCGGACTTTGACATCCTTGAAACCCTGGGCT CCGGGTCTTTCTCCACCGTCTTCCGAGCCCGTCCCCGCTCCTCCCCTTCC CTGCCCATCGTCCTGAAGGAGACCCGTTCCCTCAGCAGCAGCGCCGTCAC CCGGGCTAATGTGGCACGGGAAGTGGAGATGCTCAAGATTGCAGTCGGCT GCCCGTACATTTCTCGGTTCTACGCGGCGTTTACGGGCAACGATCATCAC TATATGGTGCTTGAGTGTATTCCAGGAGGGGATCTCCTCAAGACTGTGCA GAAATGCATGGCCACCAAGAGCCCCCCGGACGAGGCAACCCTGTGGCGGT ACCTTTACGAACTCGGGCAGGGGGTGGCTTTCCTCCATCGTGCGGGGATC GTTCATCGCGATATTAAATGTCAAAATATCATGCTAACAAACACGGGGCA CGTGAAATTGATTGACCTTGGATTGGCAGCACATTTGGTGGAAGGAGAGG AGTTGCAGGAGAGGTGTGGGACGCCGTTCTACATGGCGGTGGAGATGATT CGAAAGCAGCCATACGACCACCGGGTCGATGTATGGAGCGTTGGTTGTGT CCTCTACATGCTGGCTCAGCTACGACCGGCATTCAATGGCACGACATTGC CGCAGTTGTGTCGGTCGATAGTAGATGATGCCCCCCTACCCTTGTGTGGG AAGCGATACAGCCCGTACCTGTCGCATTTGATTTTGGGGATGCTGGACAA ACGGAGGGAGGCGAGACCTAGGATGGAGGAGGTGCTATCTCATCCTGTGT TTGCGCACTACCCTCATTTCCCCCCAACAATTTTCAAGCAGCCGTTTCAG ACGGAGGCGATGGCCCTTGGGCTGGGAAGTTTGGACTTGACAGGGAATAC GGGGATGCTGTTGGAGTTGGGGGCAGGGAGGGAGGGAGGGAGGGAGGGAG GGAGGGAGGGGGGATTGCTTGCTGATGGAGGCGGTGCTCCGGGAGGGGTT TGTGTGACTGGTGCAGGTACATTGGTGGAGAAGGCGGTGGCTGCGGCGGC GGCAGGCAGAGAAGGAGGAGGAAGAGGGGTAAGTGGAGCAGGACCAGGAC AAGAGCACCATTATGTGCAGTGCCTGCCCGTCCAGCAGCAGATGCAGCAA CATCAGCATAAGCAGCAAGTCACCGCCTCCTACCCTTTCAATCACCACCA ATATCAATATCAACAGCATTTCCTACAGCATTTGCAGCAGCAGCAGCAGC AACAGCAGCAGCAACAGCAGCAGCAGCAGCTACTTCATCCAACGGCTTTT CCCCCAGGGCCTCTGATGGGCGATCCTCCCGCGGAAGAAGACGACAACGA AAAGGCAGAGGGAAGAGACGACATGTTCAAGGACCTCCCTCCCTCTCTTC CTCTTCTTGCGCTGGCAGATTCCGAGCAAGTCAATGTTTATGACAGCGAG CTCTTCAATAATCCTCCCTTCTCTTCATGCTCCACGCCTCGTCCTTTCTC CTCCGCTTCCTCACCCGCGCCCCTATTTGAAGGCCAGAGGGGTGAGGTAG GTTTGCCCATCTACCAATCACTATCCCACTTACCCTCCTCATTTATGCTC CGGCAGCAGCAGCAGCAGCAGCAGCAACAACAACAACAACAGCAACAGCA GCAGCAGCAGCAGCAGCCACAGCCACCGCCGCAGCAGCAACAGCAGTCGC AACAACAGCAGCAGGAGGAGCAGCCGCAGCCAGAACAACAAGAGGGGTTG ATAGCGGGACAGCGGATCACGGACTATCCACAGCTTCTTCTCCGAATACC GTCCTTCTCCTCCTCCTCTCCCATCTCCACCCTCTCCTCTCCCGTCGCAT CCTTCTCTAGCAGCCCACCGCCCTCCCACACAAGCTCAACATACGCCTCT TTTGCCATAATACACGCTCGAATTGAGGGACATGACAGCTCCAGCCCTTC CTCCCCCTCGTTCTCGTCCTCGTCCTCCGCTGGAGCCCGTCGCCTCATCC GCCCTGGGTTCCTTGGCAAGGCCTCTCCACGTGTCCGAGACCTGTTGCAC TATAGCAGCAGTAGCAGCAGAAACACACCGCATCGACAGGGCTCCCCCTC ACAGAAGCGGACTCTTGTTGAGCTGGACGGCGACATTCCTTCCTACTGCT CCTCCCCCCGTTCCTCCTCCTCCTCCTTCTCCTGTCACTCCTCCTTCCAG CGGCAGCAGCAGCACCACCATCAAACCTTAAGTTACATCAGCAGCAACCA CAACATCTGCAACAGCAGTTTTCTCGCTGCTGGTGTCTCTTCTGGTCGTA GTATTGATGCTGCTGCTGCTGCTGCTGCTGCTGCTGTGAGCGCGAACGGC TGCGAACGGAGCGAGAGTTTGTCGTCAATGACAGGAGAAGGACTCCATCT CGAAAGAGGGCCAGAGGGACTTAAGAGGAGCAGATTAATGACTGAATTGA AAGTGGAACGAACACATTCTTCCCCTGGACGTCTTATGGAGAATCAATTT GCGATTTTCCCGAAGAGAGGGCTGGAAGAGGGAGGAAGGGAGGGGGAGGG GGAGGGGCATGGTCAGATGGGGCAGCAGCGGATAATGGAACATAAGGAGA TAGAGGAGGAGGAAGAAGAGCAGGATAGGCGGGCACGAAAGGATGGAGGT AAAGAGGGATTACAATTGCAGGTCGTGAAAAATGGTGCACCTTTGTCCAC AACATCGGGAGGGAGGCCTGTGGCGATCGATGCATGCGTGAGCAACACAA GCCTGGCTTCCTCCCCCATCACCGCGACCTTTGCCTCGCCGTCGTCTTGC TCCTCGTCCTCCGTCCATTCCTCCCCGCATCATTTCGTGCGCACCCTCTT GTCCGGCATTGCGATTGGTGGTCGGGGGGGGGAAATGAGCGATGAGAGCT TCGCCTCCTCCTTCTCCTGCTCTTCTTCCTCCTTCTACTTATTCAACGAC GCGGGTACGGAAAGAGGAGGTGAAGGAAGAGAAGAAGAAGAAAGAAGAAG AGGAGAAGGAGGAGGAGAAAGAGGAGAGGGAAGAGAAGAACGAGATGGAG ATGGAAGAGGAGGAGGAAGAGGAGGCGGAGGAGGCGGAGGAGGCGGAGGA GGAGGAGGAGGAGGAGAAAAAAGAGGAAGAAGGGGAAGAGGAACGGACTA TCTCCCGATTTCGCAGCTAAACCCGCACCAACAGAGGAGTTTAGATATAA TCTCGGCGCCACAGTGCTCATGGGCAGTAGGGACTGCGGGCTCGCTTCCA GGGACACCCTTGCGGCAGCAGTGGACAAAGACAGGAGGTCGGTTGCAGGG GTGTGATTTTGGAGGAGGAGGAGGAGGGGAAGAAGGACTGAAGAAGCGAA CACATCGTCGAAGTGTGGCTGTAGTGCATGCTGCAGGGGGACTGCCGGGA GTGGTAACGGCGGGAGAAGGGGAGGTAGGGAGCGGAAGTTGAACTTCTGC GAGAAGTAAAGGGAAGGGAGAAGAGGAGGAGGGTGTAAAATACAAAACAC AATACAATATTACATACAAAGTGTGAAATAGCGAGCAAATTTGATAGTTC ATGATATGTAAGAATATGGCTTAGAGATCGCGAATAATAGAAATATACAC ATTTATTCGTAAAGCACAACGAAGTCAATGGGAACAGTGAATATGAAAGA GTCTTAGATCCCCATCACCCTGTATACGCCTCATGTGTGTGCGCTCGGAA GACAGAGAAATAGTTGGCTACTTCTCTGTGTAGACATGTCTCTTGTCAAT GCATGCGTGGGTACGTGTGTAAACAACCAATCAAGTCCACCATTTTATAT TCAAAGCACCAATTATTTTATTTCTTACAATAACGAGCAAAAAACGAAAG CTGGATGAAAACCACCCAGTAATTAGTAAAGTAAGAAGGCAAGTACGAAT TTTAATCCCCACTTGACAGCTGGAAAGAGGACGAGCTGCAGTACGGAGCA GAGGAGCAACGTAAGGCACGCCTGCTGACGCTCGACCGAAAGGGAAATCC ACTTCAACCGATCAAGAGGCAGGTCTGCTGACAAAGGGGGGGAAAAGCGA ACAAAAGTGTTAGAAAATAAAGTGTGGGGACTCGAGACATAACTTCGAAG GGTGCGAGTTTGTCGTAGGCCGAGTCGTTGAATGGTAGTGATGGTGACAC TGTGCATGTGAGTAATGACGATTGTGTTGTTATGTTTGAATGGATAACAC ATGCCTTCCCGCACAAAAACTTGAAACAGAATCACGGTTGAATGAGTTTG GGAAAGCGGGAACAAGAAACAAAACACAGAGGATTAAAGAGAAGGCTGCA AGCAAGCGTAAAGAGAGGAAATATAAAATGGGAAGGGACCAACAAGGGAA CAATTTTTATAGTATA
back to top

Coding sequence (CDS) from alignment at chr11:258631..263196+

>NO11G00610.1 ID=NO11G00610.1|Name=NO11G00610.1|organism=Nannochloropsis oceanica|type=CDS|length=3444bp|location=Sequence derived from alignment at chr11:258631..263196+ (Nannochloropsis oceanica)
ATGGAGAAGACCTACTGCCTCGCGGACTTTGACATCCTTGAAACCCTGGG
CTCCGGGTCTTTCTCCACCGTCTTCCGAGCCCGTCCCCGCTCCTCCCCTT
CCCTGCCCATCGTCCTGAAGGAGACCCGTTCCCTCAGCAGCAGCGCCGTC
ACCCGGGCTAATGTGGCACGGGAAGTGGAGATGCTCAAGATTGCAGTCGG
CTGCCCGTACATTTCTCGGTTCTACGCGGCGTTTACGGGCAACGATCATC
ACTATATGGTGCTTGAGTGTATTCCAGGAGGGGATCTCCTCAAGACTGTG
CAGAAATGCATGGCCACCAAGAGCCCCCCGGACGAGGCAACCCTGTGGCG
GTACCTTTACGAACTCGGGCAGGGGGTGGCTTTCCTCCATCGTGCGGGGA
TCGTTCATCGCGATATTAAATGTCAAAATATCATGCTAACAAACACGGGG
CACGTGAAATTGATTGACCTTGGATTGGCAGCACATTTGGTGGAAGGAGA
GGAGTTGCAGGAGAGGTGTGGGACGCCGTTCTACATGGCGGTGGAGATGA
TTCGAAAGCAGCCATACGACCACCGGGTCGATGTATGGAGCGTTGGTTGT
GTCCTCTACATGCTGGCTCAGCTACGACCGGCATTCAATGGCACGACATT
GCCGCAGTTGTGTCGGTCGATAGTAGATGATGCCCCCCTACCCTTGTGTG
GGAAGCGATACAGCCCGTACCTGTCGCATTTGATTTTGGGGATGCTGGAC
AAACGGAGGGAGGCGAGACCTAGGATGGAGGAGGTGCTATCTCATCCTGT
GTTTGCGCACTACCCTCATTTCCCCCCAACAATTTTCAAGCAGCCGTTTC
AGACGGAGGCGATGGCCCTTGGGCTGGGAAGTTTGGACTTGACAGGGAAT
ACGGGGATGCTGTTGGAGTTGGGGGCAGGGAGGGAGGGAGGGAGGGAGGG
AGGGAGGGAGGGGGGATTGCTTGCTGATGGAGGCGGTGCTCCGGGAGGGG
TTTGTGTGACTGGTGCAGGTACATTGGTGGAGAAGGCGGTGGCTGCGGCG
GCGGCAGGCAGAGAAGGAGGAGGAAGAGGGGTAAGTGGAGCAGGACCAGG
ACAAGAGCACCATTATGTGCAGTGCCTGCCCGTCCAGCAGCAGATGCAGC
AACATCAGCATAAGCAGCAAGTCACCGCCTCCTACCCTTTCAATCACCAC
CAATATCAATATCAACAGCATTTCCTACAGCATTTGCAGCAGCAGCAGCA
GCAACAGCAGCAGCAACAGCAGCAGCAGCAGCTACTTCATCCAACGGCTT
TTCCCCCAGGGCCTCTGATGGGCGATCCTCCCGCGGAAGAAGACGACAAC
GAAAAGGCAGAGGGAAGAGACGACATGTTCAAGGACCTCCCTCCCTCTCT
TCCTCTTCTTGCGCTGGCAGATTCCGAGCAAGTCAATGTTTATGACAGCG
AGCTCTTCAATAATCCTCCCTTCTCTTCATGCTCCACGCCTCGTCCTTTC
TCCTCCGCTTCCTCACCCGCGCCCCTATTTGAAGGCCAGAGGGGTGAGGT
AGGTTTGCCCATCTACCAATCACTATCCCACTTACCCTCCTCATTTATGC
TCCGGCAGCAGCAGCAGCAGCAGCAGCAACAACAACAACAACAGCAACAG
CAGCAGCAGCAGCAGCAGCCACAGCCACCGCCGCAGCAGCAACAGCAGTC
GCAACAACAGCAGCAGGAGGAGCAGCCGCAGCCAGAACAACAAGAGGGGT
TGATAGCGGGACAGCGGATCACGGACTATCCACAGCTTCTTCTCCGAATA
CCGTCCTTCTCCTCCTCCTCTCCCATCTCCACCCTCTCCTCTCCCGTCGC
ATCCTTCTCTAGCAGCCCACCGCCCTCCCACACAAGCTCAACATACGCCT
CTTTTGCCATAATACACGCTCGAATTGAGGGACATGACAGCTCCAGCCCT
TCCTCCCCCTCGTTCTCGTCCTCGTCCTCCGCTGGAGCCCGTCGCCTCAT
CCGCCCTGGGTTCCTTGGCAAGGCCTCTCCACGTGTCCGAGACCTGTTGC
ACTATAGCAGCAGTAGCAGCAGAAACACACCGCATCGACAGGGCTCCCCC
TCACAGAAGCGGACTCTTGTTGAGCTGGACGGCGACATTCCTTCCTACTG
CTCCTCCCCCCGTTCCTCCTCCTCCTCCTTCTCCTGTCACTCCTCCTTCC
AGCGGCAGCAGCAGCACCACCATCAAACCTTAAGTTACATCAGCAGCAAC
CACAACATCTGCAACAGCAGTTTTCTCGCTGCTGGTGTCTCTTCTGGTCG
TAGTATTGATGCTGCTGCTGCTGCTGCTGCTGCTGCTGTGAGCGCGAACG
GCTGCGAACGGAGCGAGAGTTTGTCGTCAATGACAGGAGAAGGACTCCAT
CTCGAAAGAGGGCCAGAGGGACTTAAGAGGAGCAGATTAATGACTGAATT
GAAAGTGGAACGAACACATTCTTCCCCTGGACGTCTTATGGAGAATCAAT
TTGCGATTTTCCCGAAGAGAGGGCTGGAAGAGGGAGGAAGGGAGGGGGAG
GGGGAGGGGCATGGTCAGATGGGGCAGCAGCGGATAATGGAACATAAGGA
GATAGAGGAGGAGGAAGAAGAGCAGGATAGGCGGGCACGAAAGGATGGAG
GTAAAGAGGGATTACAATTGCAGGTCGTGAAAAATGGTGCACCTTTGTCC
ACAACATCGGGAGGGAGGCCTGTGGCGATCGATGCATGCGTGAGCAACAC
AAGCCTGGCTTCCTCCCCCATCACCGCGACCTTTGCCTCGCCGTCGTCTT
GCTCCTCGTCCTCCGTCCATTCCTCCCCGCATCATTTCGTGCGCACCCTC
TTGTCCGGCATTGCGATTGGTGGTCGGGGGGGGGAAATGAGCGATGAGAG
CTTCGCCTCCTCCTTCTCCTGCTCTTCTTCCTCCTTCTACTTATTCAACG
ACGCGGGTACGGAAAGAGGAGGTGAAGGAAGAGAAGAAGAAGAAAGAAGA
AGAGGAGAAGGAGGAGGAGAAAGAGGAGAGGGAAGAGAAGAACGAGATGG
AGATGGAAGAGGAGGAGGAAGAGGAGGCGGAGGAGGCGGAGGAGGCGGAG
GAGGAGGAGGAGGAGGAGAAAAAAGAGGAAGAAGGGGAAGAGGAACGGAC
TATCTCCCGATTTCGCAGCTAAACCCGCACCAACAGAGGAGTTTAGATAT
AATCTCGGCGCCACAGTGCTCATGGGCAGTAGGGACTGCGGGCTCGCTTC
CAGGGACACCCTTGCGGCAGCAGTGGACAAAGACAGGAGGTCGGTTGCAG
GGGTGTGATTTTGGAGGAGGAGGAGGAGGGGAAGAAGGACTGAAGAAGCG
AACACATCGTCGAAGTGTGGCTGTAGTGCATGCTGCAGGGGGACTGCCGG
GAGTGGTAACGGCGGGAGAAGGGGAGGTAGGGAGCGGAAGTTGA
back to top
Synonyms
Publications