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Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
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| chr11 | genome | chr11:222831..226104 - |
Analyses
This mRNA is derived from or has results from the following analyses
Homology
BLAST of NO11G00510.1 vs.
Match: EWM25168.1 (cyanate hydratase [Nannochloropsis gaditana]) HSP 1 Score: 203.8 bits (517), Expect = 5.400e-49 Identity = 112/153 (73.20%), Postives = 121/153 (79.08%), Query Frame = 0
Query: 1 MLSSFRLAVSRH-VSSSSLRP-SLLPTTSNATRRLATAFAEEDKAFHVSNLLAAKKKAGLTFDEIAVETGLTNAYVAQLFYRQAHLKPETAKKMKAAVPTLTTDDLEVMQEVPFRSYDRAVLRTEPLIYRLEEAVLHYGMGIKAIVNEKFGDG 152
MLS R A SR + S RP S P + TR AT F EE+KA HV NLL AKK+A LTFDEIA +TGLTNAYVAQLFYRQA LKPET KM+AAVPTLT DLE+MQEVPFRSYDR VLRTEPL+YRLEEAVLHYG+GIKAIVNEKFGDG
Sbjct: 1 MLSGTRRAFSRRSILSPWTRPTSFAPASITPTRAFATGFIEEEKAVHVHNLLKAKKEARLTFDEIAAKTGLTNAYVAQLFYRQAQLKPETVPKMEAAVPTLTGKDLEIMQEVPFRSYDRDVLRTEPLVYRLEEAVLHYGLGIKAIVNEKFGDG 153
The following BLAST results are available for this feature:
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >NO11G00510.1 ID=NO11G00510.1|Name=NO11G00510.1|organism=Nannochloropsis oceanica|type=mRNA|length=1454bp
GGGATTACGGCGATGGGACGAACAAGTGGCTCTTCCCCTTCCTTTCTTAC
CACTTGCATGGACAGTTTGCGATGACACTAGCAATGGCATTAGCAGCATC
ATTACCTTGCAGTCGCCTTTCTCATGCCCCCCGCTTGCGTTGACTTGTCT
TGGTGGATGGATTGCTCGGCCGTGGACGGAGCTCGTCAACGTCCTGCCTA
CTTTTCGATGCTCGTCTGTTCTGTGTATCTCTCTCCTTCGACATACAATT
ACGCCAAAATCAAACGCAAAATCTCATCAACGGATAACTCTTTGTGTTCT
TTGCGCTTTTCTACAATGTCTGCGGCATGCCAGCCTTTCAAAGGAATTTC
CCCCCCCCCCCAGCAATGCTTAAGATACTCTCGTTCTACAAGGCATTTAA
CCTCTCTGCCCGCCCATCCTCCCGTAACAACACAGAAACATAACCTCTTA
TCAATCGTATTCAATAAAGTGTCTCAAGTAACATAAATGTTGTCATCCTT
CCGCCTTGCCGTGTCTCGTCATGTGTCCTCGTCCTCTCTCCGTCCGTCCC
TCCTTCCCACCACCAGCAACGCAACCCGTCGTCTCGCCACAGCCTTTGCA
GAGGAAGACAAAGCCTTCCATGTATCTAACCTGTTAGCAGCCAAGAAAAA
GGCAGGCTTAACATTCGACGAAATTGCGGTCGAGACGGGTTTGACAAATG
CCTATGTCGCCCAGCTCTTCTACCGTCAGGCACACCTTAAGCCCGAGACC
GCAAAGAAAATGAAGGCAGCCGTGCCAACTCTCACAACGGACGACTTGGA
AGTGATGCAGGAGGTGCCTTTCAGGTCGTATGATCGTGCCGTGTTGCGGA
CTGAGCCTTTGATATACAGGCTGGAGGAAGCTGTGCTGCACTATGGCATG
GGGATCAAGGCCATCGTGAACGAAAAATTCGGGGATGGGATCATGTCCGC
GATTGACATGTACGCCACCGTCGAGAAAGTCAAGGGCTCGCAAGGCGAGG
ACCGAGTTTTGGTGACCCTGAATGGGAAATTTTTGCCCCATGTGGAGCAA
AGGGTTGAGAACAATGTGCAGGCACCGGTGGTCGAGGAGGGGGGGTTTAA
AAAAACAACGCGATAGTAGCAGCCGTAGGAGTAGCAGCAACCTTCCGGGA
ATGAAGGGAGGAAGGAAGGAGGAGGAGGGAGGGAGGGAAGGAGGGAGGGA
AGGAGGAGTACCTCTGGACGGTAGTCAGGATGTGAAGTAGAGGCAAGGAC
GCGGTAAGGAAATCAAGAGTAGAGATAGGAAAAGCAGGAAAAAGATAGAT
TAGAGCATATGTGAAAAAAATTGAAGAGCGACAGAGAGAGAGAGAGAGGG
AGACTTTGTGGAATATTGGAAGATGGGAGAAAAGAGACAGGAAGGATAAA
GAAAAAGTTTGATTAGGGCGATAGAAAGGAGAAAGAAAAACAACTAGTGG
TGTA back to topprotein sequence of NO11G00510.1 >NO11G00510.1-protein ID=NO11G00510.1-protein|Name=NO11G00510.1|organism=Nannochloropsis oceanica|type=polypeptide|length=210bp
MLSSFRLAVSRHVSSSSLRPSLLPTTSNATRRLATAFAEEDKAFHVSNLL
AAKKKAGLTFDEIAVETGLTNAYVAQLFYRQAHLKPETAKKMKAAVPTLT
TDDLEVMQEVPFRSYDRAVLRTEPLIYRLEEAVLHYGMGIKAIVNEKFGD
GIMSAIDMYATVEKVKGSQGEDRVLVTLNGKFLPHVEQRVENNVQAPVVE
EGGFKKTTR* back to topmRNA from alignment at chr11:222831..226104- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >NO11G00510.1 ID=NO11G00510.1|Name=NO11G00510.1|organism=Nannochloropsis oceanica|type=mRNA|length=3274bp|location=Sequence derived from alignment at chr11:222831..226104- (Nannochloropsis oceanica)
GGGATTACGGCGATGGGACGAACAAGTGGCTCTTCCCCTTCCTTTCTTAC
CACTTGCATGGACAGTTTGCGATGACACTAGCAATGGCATTAGCAGCATC
ATTACCTTGCAGTCGCCTTTCTCATGCCCCCCGCTTGCGTTGACTTGTCT
TGGTGGATGGATTGCTCGGCCGTGGACGGAGCTCGTCAACGTCCTGCCTA
CTTTTCGATGCTCGTCTGTTCTGTGTATCTCTCTCCTTCGACATACAATT
ACGCCAAAATCAAACGCAAAATCTCATCAACGGATAACTCTTTGTGTTCT
TTGCGCTTTTCTACAATGTCTGCGGCATGCCAGCCTTTCAAAGGAATTTC
CCCCCCCCCCCAGCAATGCTTAAGATACTCTCGTTCTACAAGGCATTTAA
CCTCTCTGCCCGCCCATCCTCCCGTAACAACACAGAAACATAACCTCTTA
TCAATCGTATTCAATAAAGTGTCTCAAGTAACATAAATGTTGTCATCCTT
CCGCCTTGCCGTGTCTCGTCATGTGTCCTCGTCCTCTCTCCGTCCGTCCC
TCCTTCCCACCACCAGCAACGCAACCCGTCGTCTCGCCACAGCCTTTGCA
GAGGAAGACAAAGCCTTCCATGTATCTAACCTGTTAGCAGCCAAGAAAAA
GGCAGGCTTAACATTCGACGAAATTGCGGTCGAGACGGGTTTGACAAATG
CCTATGTCGCCCAGGTAGGTAGGAAAGGAGGTAAATGAGGGAGGGTGGTG
AAGGGGGAGGAGAGCGGCGTTGAAACGCTTGCTCATTTTGTCGTTAACGG
CCAAATGTGACCACGCTTAGACACAATCTCCAAATTTTATGAGCGGTCTC
AGAACATTGGCGAGCAACAGCACTCACCCTTTCCTACCTCACTCCCTCTC
TTCTCTCTTCCTCCCGTCCTCCCTTCCTCCCTTCCTCCCTTTCTTTCTCT
CTCCCTCCGTCATCCCCGAAGCTCTTCTACCGTCAGGCACACCTTAAGCC
CGAGACCGCAAAGAAAATGAAGGCAGCCGTGCCAACTCTCACAACGGACG
ACTTGGAAGTGATGCAGGAGGTAACGAACCACTGCGAAGGGAGGGGAGGA
CGGAGGGTGAGAAGGAAATATAGAAAGAGAGGAATAAGAGAAGGCTTACT
CCTTTGATCGATATTATAAATATACGTACATGGAATTCTTTAGGTGCCTT
TCAGGTCGTATGATCGTGCCGTGTTGCGGACTGAGCCTTTGATATACAGG
CTGGAGGAAGCTGTGCTGCACTATGGCATGGGTAAGAACATTGTTATTTA
TTTAATTTCATATTTCATATTTATATATTATTTTATCTTAATCTACCTGT
TTATAAATAAATTCATGTACCCTTAACAATCGACATGTAAAAAAAGGGAA
GGAGATTCGTGCAAGGAAACGAAAAAGCCAAATCAGAGATGGATGCGAGG
GAGGGGAAGAGGAAGGGAGGGGAAGAGGGGAAGAGGGAGCGAGGGATAGA
AAGAGGTCGGGAGGAAAGCATACTCCAAAAGTGTTTTACACAATGACCGG
TCTTCCGGGTCGTTGACACTGTGCATTTCCTCCCTATCTTCCTCTCCTCT
CCTGCTTTCCTTTCCTCTCTCTTCACCCTTTCTTTTCTCCTTCCCTCCCT
CCCTCCTTGATGACACACTTTTGCGTGCACCAAGAAGAGTACTTAAGTAA
TTGGTGGGCATGCCCCTTTGAGCGCGGATCAGGCCTATATCTATTTCTCC
ATCCTCATTACGTATCCATATCTCCCGTATCTTCCCTTCTTATTCCTCCC
TCCCTCCTCTTGTTCTGCCTCCTCCCTCCTTTTTTACCGTCCTTTTCTGT
TCTGATGTAAGATATATGTAAATATCATGACTGTCATATATCTCCTTTCC
ACGCGCCCTTTTTCGGTCAAAAAGGCACAGCTCACACGCATGCGCATGCG
TCGGGAGCGGGAGGTGGTGGGACTACCATGCGATTCCATGCTCCGCCTTC
CCTGTGTGCCGTACGATACACCCTGTGTGCCGTACGATACATATGTATAT
ATATATATACATAAGCAACTATATAACATGAACAAACCAATAAATCGATA
AATATATATACACATACAAGCAACCATATAACATGAATAAATCGACAAAT
GAATAAATAAACAGATAAACTTATATGTAGACACCGGAGTAAACAATGCA
GGCCATGATTAGACTCGAATGACTTTTCAATTACCCAAGGCGGGGGCAAA
AAGCCTATCACCGACGTGCGGGACCAATTAATAACTACACTTGAACTGAG
CCGCTTCCGACTACATGCATGCACGAGGGAGGGAAGGAGGAAGGGAGAAA
TGACATTATTGCGTACATGCACGAGGGAGGGAAGGAGGAAAAGAGAAGAT
AAGTGGAACAGGACCTTCCTCTGACAGAACGCTCACTTTCACCGTCTTCC
TTCATCTCATTCTCTCGATTTATACAAACAGGGATCAAGGCCATCGTGAA
CGAAAAATTCGGGGATGGTACGTCCTTTCGGGCATGGGGATGCTTTCCCT
CCCTCCCTCCCTCCCTCCTCCCATCCCCCCCTCCCTCTCTCCCTCCCTCC
CTCCCTCCCTCCAATCCTTCCTTCTCTTACTCGCCCTTGACCTCCCACCC
CCCCCACACTCTCTCTTTTACTTTCTATTACAAAAAATGAAACATGATTG
TGTTTCATCCCCTTTCCTTCCCCTCCCTCCCCTCCCTCCTCTTCGCCCTG
CCCTCAGGGATCATGTCCGCGATTGACATGTACGCCACCGTCGAGAAAGT
CAAGGGCTCGCAAGGCGAGGACCGAGTTTTGGTGACCCTGAATGGGAAAT
TTTTGCCCCATGTGGAGCAAAGGGTTGAGAACAATGTGCAGGCACCGGTG
GTCGAGGAGGGGGGGTTTAAAAAAACAACGCGATAGTAGCAGCCGTAGGA
GTAGCAGCAACCTTCCGGGAATGAAGGGAGGAAGGAAGGAGGAGGAGGGA
GGGAGGGAAGGAGGGAGGGAAGGAGGAGTACCTCTGGACGGTAGTCAGGA
TGTGAAGTAGAGGCAAGGACGCGGTAAGGAAATCAAGAGTAGAGATAGGA
AAAGCAGGAAAAAGATAGATTAGAGCATATGTGAAAAAAATTGAAGAGCG
ACAGAGAGAGAGAGAGAGGGAGACTTTGTGGAATATTGGAAGATGGGAGA
AAAGAGACAGGAAGGATAAAGAAAAAGTTTGATTAGGGCGATAGAAAGGA
GAAAGAAAAACAACTAGTGGTGTA back to topCoding sequence (CDS) from alignment at chr11:222831..226104- >NO11G00510.1 ID=NO11G00510.1|Name=NO11G00510.1|organism=Nannochloropsis oceanica|type=CDS|length=630bp|location=Sequence derived from alignment at chr11:222831..226104- (Nannochloropsis oceanica)
ATGTTGTCATCCTTCCGCCTTGCCGTGTCTCGTCATGTGTCCTCGTCCTC
TCTCCGTCCGTCCCTCCTTCCCACCACCAGCAACGCAACCCGTCGTCTCG
CCACAGCCTTTGCAGAGGAAGACAAAGCCTTCCATGTATCTAACCTGTTA
GCAGCCAAGAAAAAGGCAGGCTTAACATTCGACGAAATTGCGGTCGAGAC
GGGTTTGACAAATGCCTATGTCGCCCAGCTCTTCTACCGTCAGGCACACC
TTAAGCCCGAGACCGCAAAGAAAATGAAGGCAGCCGTGCCAACTCTCACA
ACGGACGACTTGGAAGTGATGCAGGAGGTGCCTTTCAGGTCGTATGATCG
TGCCGTGTTGCGGACTGAGCCTTTGATATACAGGCTGGAGGAAGCTGTGC
TGCACTATGGCATGGGGATCAAGGCCATCGTGAACGAAAAATTCGGGGAT
GGGATCATGTCCGCGATTGACATGTACGCCACCGTCGAGAAAGTCAAGGG
CTCGCAAGGCGAGGACCGAGTTTTGGTGACCCTGAATGGGAAATTTTTGC
CCCATGTGGAGCAAAGGGTTGAGAACAATGTGCAGGCACCGGTGGTCGAG
GAGGGGGGGTTTAAAAAAACAACGCGATAG back to top
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