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Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
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| chr11 | genome | chr11:11280..14679 - |
Analyses
This mRNA is derived from or has results from the following analyses
Homology
BLAST of NO11G00060.2 vs.
Match: XP_007333015.1 (hypothetical protein AGABI1DRAFT_131378 [Agaricus bisporus var. burnettii JB137-S8]; EKM76284.1 hypothetical protein AGABI1DRAFT_131378 [Agaricus bisporus var. burnettii JB137-S8]) HSP 1 Score: 155.2 bits (391), Expect = 5.800e-34 Identity = 92/243 (37.86%), Postives = 130/243 (53.50%), Query Frame = 0
Query: 298 GTVDRLKLQELLGNAFIFLLAGHETSAHTLIWALLLLALHPDEQAVAHEEVIRVLGSPALPSDSSDPSSSPLPSMTYDQLSLLPYCQGVMNEALRLFPPVTMIPKVCSADTTLTLPPSSSSPSSSSSSFRIPKGVNVFLNLYALHRNPKHYAEPNAFKPRRWVKPEGKAEGEAKGKAEGKEGGEEEQFVGIDYFAFAPFSLGERSCLGRKFGQITVMASLALLLQRYEVGVGGGGREERRGRG 541
G + L E++ N FIFLLAGHET+AHTL + LLALHPDEQ ++ + VL P +P TYD++SLL V NE LR++ P T+IPK + DTTLT+P + + +PKG NVFL++ LH NPK++ +P +F P R+++P + AF PFS G R CLGRKF +I M ++ +L+ +Y++ V +EE R G
Sbjct: 287 GESEGLNADEIISNVFIFLLAGHETTAHTLCYTFALLALHPDEQEKLYQHIKSVLKDPRVP--------------TYDEMSLLTRSMAVFNETLRMYSPATLIPKCSAEDTTLTVP----NAKGETVVIPVPKGTNVFLHIPGLHYNPKYWKDPFSFYPDRFMQPNWNKD------------------------AFLPFSAGARGCLGRKFAEIEAMVAITMLVSQYKIAV----QEEPRFAG 483
The following BLAST results are available for this feature:
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >NO11G00060.2 ID=NO11G00060.2|Name=NO11G00060.2|organism=Nannochloropsis oceanica|type=mRNA|length=3171bp
CCCGCTCTAGTTTTTTTTTAGAAAACCTTTCGCCTTTGATGTCATTCTCC
CTGTGTACGTGTGGTGGTGGCCCATGCTCAAACATTTTGAAGTCAACCGC
CGGAGAAAGCAATCCCGTCATTTCTTCCGAATTGTGTTTCCAGACATACA
AGCCCACACCCGAATCTTCGGGATAGTGTGCTGAACTATTCTTTCATCTG
GCTATGGGCCGGCTCTTGGTATTGTTGGATGGACGGACTGGGCGTGCATT
GCTCGCTCGGAGTTTACGCCTTTCCTTCTTACCCTCCTCCTCCCCCCCTA
CATGAGCCGCTTCCACACCTTTACACCACACACCGATAGAACACAATAGC
AATTGTATTTGCCCTCTTTGTCTGGTGTAAGGTCAATCATGGCAACGGAG
GTCTCCTTCCTCCTGACTGTCATCGCCCTGCTACCCAGGGTCCTCGCCAC
CAGCGCCGTCACTTTCCTGTGCCTGTGGGTGGGCAAGCACTGCTTTATCT
TCCTCCAGGGCTTCTACATGGTCAGTAAAAGGCATATCCTACTCATGGAA
AGAGGAGGGAAATGGCTGGGAGGAAATGTGTTCGGAAACCGCGGGCTGGC
TCTATAATGTGATGCTTCAAGGTTGACTTCCTTCTCACACACATATGGCT
ATCCTTTGCACAGCGCTCCCATCAAGGATGCTGACTACAGAGTCTATGTC
CTTACCCATCTACACTAGTAATCTATTAAATTGATAACATTCCCTCTCCT
CCCCCCTCTATCGCCTTCCTTTTCTCCACTCCGTCCCCTTCCACCACAAG
GTCCGCCACCTTCCCCACATCTACCAGTACTGCGACATCTTTTCCAGCGT
GGGCTTACTATTCCCCTTCTTGCTCAAGTACAGGTCCAACTTCTACGAAA
TCGCCCCCGAGCTATTTGAATCGCTACAGACCCCCTTGTTTGCTTTCATC
TCTTCCAAAAACGTTACTATCCACATCAACGATGCGCATCTAATCCGGGA
AGTCTGCATTGGCAAGCGGAGGAGCTTTCCCAAGGCCGTTCACATGTATG
ACACAGTCAGGGTGTTCGGGGAGAACATCGTGACGACAGAGGGAGAGGTC
TGGAGGCGGCACAGGTTTGTGGCGCGCGCGGCCTTCAGCGAGGCTAACAA
CCGGTTGGTGTTTGAGACGGTCCAGGCGTGTGCGGGAGAGATGATGGACG
CCTGGGAGAGGCAGAGGGAGGGAGGGAAAGAGAAAGGGCAGAACGAGGGA
GGGAATAATGAAGGCTTTCGGGTGACATTGATGGAGGATATGACGCAACT
GACCTTGGCCGTCATTAGCCAGGCCAGCTTTGGGCTTCAGCTGGAGGCCG
CCTATGGGAAGGAGAGGGAGGAGAAGGAGAAGGCAGAGAATGAGGAGGGG
AGGGGCGTGAAGGGGGGAAAGGATGGGCGGTACACCATGTCGTTTACCAA
GTGCATGCAAATGGTCTCCCATCACACGTTGGCTAAGGTCCTAGTCCCCA
GATTGCTCTTCTCCATGCCCTTCCTCCCCCGCCTACAGGAGATCGCCCGC
GCCTACCGAGAATTCGATTGCCACTTGCTAGACAGCATCGATCGGGAACG
GAGCAGACAGGCAGGGATGGAGGGAGGGACATTGATGAAGGAGGAAGGCG
ACGGGGAAGTGGCGCTAGACGGGTGCCGCAGACGATGGGGGGGCTTGAGC
CGGATGCAGTCCTTTCGGAGGAGGAAGGACGCGGGAGGGAGGAAGGGAGG
GCCAATGAAGAAGGAGGACCACATGGCCTGTGTCCGCTCTCCGGAGCAGA
AGGAGCAGGAGCGGCAGCACACCCAGCGTCGGCAGCAGAATCTCTTCTCG
CTTCTCGTCCAAGCCAACGACAAGGCCGACGACACCGCGGGCTCGGGGGA
GGTCGAGGAGGAGGGCGAGGGGAAGAAAAAGCGGGGGACGGTCGACCGAC
TTAAACTGCAGGAGTTGCTGGGTAATGCCTTCATCTTCCTTCTGGCGGGC
CACGAGACGTCGGCGCACACGCTGATTTGGGCCCTCCTCCTCCTCGCCCT
CCACCCCGACGAACAAGCAGTCGCCCACGAGGAGGTCATCCGGGTACTCG
GCTCGCCCGCCCTCCCTTCCGACTCCTCCGACCCTTCTTCCTCCCCCCTT
CCCTCAATGACGTACGACCAGCTCTCCCTCCTCCCCTACTGCCAAGGCGT
CATGAACGAAGCCCTCCGCCTCTTTCCCCCGGTCACCATGATCCCCAAGG
TCTGTTCCGCCGACACCACCCTCACCCTCCCTCCCTCCTCCTCCTCTCCC
TCCTCCTCTTCTTCTTCGTTCCGAATTCCCAAGGGGGTCAATGTTTTTCT
GAATCTCTATGCTCTGCACCGCAATCCGAAGCACTACGCCGAGCCCAACG
CTTTCAAGCCGCGCCGGTGGGTGAAGCCGGAGGGGAAGGCGGAAGGGGAG
GCGAAGGGGAAGGCGGAGGGGAAGGAAGGGGGAGAAGAGGAGCAGTTCGT
GGGCATTGACTACTTTGCATTCGCGCCCTTTAGCCTGGGCGAGAGGAGCT
GCTTGGGGAGGAAGTTCGGACAGATCACCGTCATGGCCTCCTTAGCTCTG
CTGTTGCAGCGGTACGAGGTAGGGGTGGGGGGGGGAGGGAGGGAGGAAAG
GAGGGGGAGAGGTGGGAGGAGCGGAAGGCCCGGATGTTAAAGACGAAAAA
TATGCTGACGCTATGCCCGAAGGACATGGGGGTGCAGCTGGTGTTTACCA
GAAGATAGAGGGAGGGAGGGGGAGAGGGAGAGCCGATCAATGGAAAAGCG
ATGGTCAATGAGAGGGAGTGGTAGCTGGGAGAAAAAGGAGGGAGGAGAGG
AATGACGAAGGTCGAGTGCCATTAAAATGGAACATGTCCATCGCAGAGGC
CGGTTCTTGATTGATGCAACTACAATAACAAGACGACTTTCTTTCTCAAA
ACGAGGGCTTTGAGAATGGAGACACCATCGACTGGGGGGTGCTAGTAGCT
AGTCGGAAAGCAGGCGAATGGAGAGATAGAGACAGAGAGGCAGAAGGGCA
GAAAGACGCAGAGACATAAGGCGAGAGAGACATAGAAGCAGACAGAAAGA
AAGTAGACAGACAGAGAAAATAGGTGTGTACAAGAGAAATCAGAAAAGAA
ATTTGGTGTGACAAAACGCGA back to topprotein sequence of NO11G00060.2 >NO11G00060.2-protein ID=NO11G00060.2-protein|Name=NO11G00060.2|organism=Nannochloropsis oceanica|type=polypeptide|length=549bp
MYDTVRVFGENIVTTEGEVWRRHRFVARAAFSEANNRLVFETVQACAGEM
MDAWERQREGGKEKGQNEGGNNEGFRVTLMEDMTQLTLAVISQASFGLQL
EAAYGKEREEKEKAENEEGRGVKGGKDGRYTMSFTKCMQMVSHHTLAKVL
VPRLLFSMPFLPRLQEIARAYREFDCHLLDSIDRERSRQAGMEGGTLMKE
EGDGEVALDGCRRRWGGLSRMQSFRRRKDAGGRKGGPMKKEDHMACVRSP
EQKEQERQHTQRRQQNLFSLLVQANDKADDTAGSGEVEEEGEGKKKRGTV
DRLKLQELLGNAFIFLLAGHETSAHTLIWALLLLALHPDEQAVAHEEVIR
VLGSPALPSDSSDPSSSPLPSMTYDQLSLLPYCQGVMNEALRLFPPVTMI
PKVCSADTTLTLPPSSSSPSSSSSSFRIPKGVNVFLNLYALHRNPKHYAE
PNAFKPRRWVKPEGKAEGEAKGKAEGKEGGEEEQFVGIDYFAFAPFSLGE
RSCLGRKFGQITVMASLALLLQRYEVGVGGGGREERRGRGGRSGRPGC* back to topmRNA from alignment at chr11:11280..14679- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >NO11G00060.2 ID=NO11G00060.2|Name=NO11G00060.2|organism=Nannochloropsis oceanica|type=mRNA|length=3400bp|location=Sequence derived from alignment at chr11:11280..14679- (Nannochloropsis oceanica)
CCCGCTCTAGTTTTTTTTTAGAAAACCTTTCGCCTTTGATGTCATTCTCC
CTGTGTACGTGTGGTGGTGGCCCATGCTCAAACATTTTGAAGTCAACCGC
CGGAGAAAGCAATCCCGTCATTTCTTCCGAATTGTGTTTCCAGACATACA
AGCCCACACCCGAATCTTCGGGATAGTGTGCTGAACTATTCTTTCATCTG
GCTATGGGCCGGCTCTTGGTATTGTTGGATGGACGGACTGGGCGTGCATT
GCTCGCTCGGAGTTTACGCCTTTCCTTCTTACCCTCCTCCTCCCCCCCTA
CATGAGCCGCTTCCACACCTTTACACCACACACCGATAGAACACAATAGC
AATTGTATTTGCCCTCTTTGTCTGGTGTAAGGTCAATCATGGCAACGGAG
GTCTCCTTCCTCCTGACTGTCATCGCCCTGCTACCCAGGGTCCTCGCCAC
CAGCGCCGTCACTTTCCTGTGCCTGTGGGTGGGCAAGCACTGCTTTATCT
TCCTCCAGGGCTTCTACATGGTCAGTAAAAGGCATATCCTACTCATGGAA
AGAGGAGGGAAATGGCTGGGAGGAAATGTGTTCGGAAACCGCGGGCTGGC
TCTATAATGTGATGCTTCAAGGTTGACTTCCTTCTCACACACATATGGCT
ATCCTTTGCACAGCGCTCCCATCAAGGATGCTGACTACAGAGTCTATGTC
CTTACCCATCTACACTAGTAATCTATTAAATTGATAACATTCCCTCTCCT
CCCCCCTCTATCGCCTTCCTTTTCTCCACTCCGTCCCCTTCCACCACAAG
GTCCGCCACCTTCCCCACATCTACCAGTACTGCGACATCTTTTCCAGCGT
GGGCTTACTATTCCCCTTCTTGCTCAAGTACAGGTCCAACTTCTACGAAA
TCGCCCCCGAGCTATTTGAATCGCTACAGACCCCCTTGTTTGCTTTCATC
TCTTCCAAAAACGTTACTATCCACATCAACGATGCGCATCTAATCCGGGA
AGTCTGCATTGGCAAGCGGAGGAGCTTTCCCAAGGCCGTTCACATGTATG
ACACAGTCAGGGTGTTCGGGGAGAACATCGTGACGACAGAGGGAGAGGTC
TGGAGGCGGCACAGGTTTGTGGCGCGCGCGGCCTTCAGCGAGGCTAACAA
CCGGTTGGTGTTTGAGACGGTCCAGGCGTGTGCGGGAGAGATGATGGACG
CCTGGGAGAGGCAGAGGGAGGGAGGGAAAGAGAAAGGGCAGAACGAGGGA
GGGAATAATGAAGGCTTTCGGGTGACATTGATGGAGGATATGACGCAACT
GACCTTGGCCGTCATTAGCCAGGCCAGCTTTGGGCTTCAGCTGGAGGCCG
CCTATGGGAAGGAGAGGGAGGAGAAGGAGAAGGCAGAGAATGAGGAGGGG
AGGGGCGTGAAGGGGGGAAAGGATGGGCGGTACACCATGTCGTTTACCAA
GTGCATGCAAATGGTCTCCCATCACACGTTGGCTAAGGTAGGTAGATGGG
TGGGGAGGGAGGGAGGGAGAGAGGGAGGGGAGGGGCCTCGGCGGACTCAA
CTTTTGCTTCTCATACCTTGCTTTCAACTCGATTCCTCCCTCCTTTTCTC
TGCCTTTTAGTCTATTATATTTTCTCTCATGTCCGCTTTCTTTTCAATAG
ATTCAGACGTACCACCACTCATCCTTCCCCCTTTCCCTCCCTTCTCTCCC
CCCTTTTCTTCTCCAGGTCCTAGTCCCCAGATTGCTCTTCTCCATGCCCT
TCCTCCCCCGCCTACAGGAGATCGCCCGCGCCTACCGAGAATTCGATTGC
CACTTGCTAGACAGCATCGATCGGGAACGGAGCAGACAGGCAGGGATGGA
GGGAGGGACATTGATGAAGGAGGAAGGCGACGGGGAAGTGGCGCTAGACG
GGTGCCGCAGACGATGGGGGGGCTTGAGCCGGATGCAGTCCTTTCGGAGG
AGGAAGGACGCGGGAGGGAGGAAGGGAGGGCCAATGAAGAAGGAGGACCA
CATGGCCTGTGTCCGCTCTCCGGAGCAGAAGGAGCAGGAGCGGCAGCACA
CCCAGCGTCGGCAGCAGAATCTCTTCTCGCTTCTCGTCCAAGCCAACGAC
AAGGCCGACGACACCGCGGGCTCGGGGGAGGTCGAGGAGGAGGGCGAGGG
GAAGAAAAAGCGGGGGACGGTCGACCGACTTAAACTGCAGGAGTTGCTGG
GTAATGCCTTCATCTTCCTTCTGGCGGGCCACGAGACGTCGGCGCACACG
CTGATTTGGGCCCTCCTCCTCCTCGCCCTCCACCCCGACGAACAAGCAGT
CGCCCACGAGGAGGTCATCCGGGTACTCGGCTCGCCCGCCCTCCCTTCCG
ACTCCTCCGACCCTTCTTCCTCCCCCCTTCCCTCAATGACGTACGACCAG
CTCTCCCTCCTCCCCTACTGCCAAGGCGTCATGAACGAAGCCCTCCGCCT
CTTTCCCCCGGTCACCATGATCCCCAAGGTCTGTTCCGCCGACACCACCC
TCACCCTCCCTCCCTCCTCCTCCTCTCCCTCCTCCTCTTCTTCTTCGTTC
CGAATTCCCAAGGGGGTCAATGTTTTTCTGAATCTCTATGCTCTGCACCG
CAATCCGAAGCACTACGCCGAGCCCAACGCTTTCAAGCCGCGCCGGTGGG
TGAAGCCGGAGGGGAAGGCGGAAGGGGAGGCGAAGGGGAAGGCGGAGGGG
AAGGAAGGGGGAGAAGAGGAGCAGTTCGTGGGCATTGACTACTTTGCATT
CGCGCCCTTTAGCCTGGGCGAGAGGAGCTGCTTGGGGAGGAAGTTCGGAC
AGATCACCGTCATGGCCTCCTTAGCTCTGCTGTTGCAGCGGTACGAGGTA
GGGGTGGGGGGGGGAGGGAGGGAGGAAAGGAGGGGGAGAGGTGGGAGGAG
CGGAAGGCCCGGATGTTAAAGACGAAAAATATGCTGACGCTATGCCCGAA
GGACATGGGGGTGCAGCTGGTGTTTACCAGAAGATAGAGGGAGGGAGGGG
GAGAGGGAGAGCCGATCAATGGAAAAGCGATGGTCAATGAGAGGGAGTGG
TAGCTGGGAGAAAAAGGAGGGAGGAGAGGAATGACGAAGGTCGAGTGCCA
TTAAAATGGAACATGTCCATCGCAGAGGCCGGTTCTTGATTGATGCAACT
ACAATAACAAGACGACTTTCTTTCTCAAAACGAGGGCTTTGAGAATGGAG
ACACCATCGACTGGGGGGTGCTAGTAGCTAGTCGGAAAGCAGGCGAATGG
AGAGATAGAGACAGAGAGGCAGAAGGGCAGAAAGACGCAGAGACATAAGG
CGAGAGAGACATAGAAGCAGACAGAAAGAAAGTAGACAGACAGAGAAAAT
AGGTGTGTACAAGAGAAATCAGAAAAGAAATTTGGTGTGACAAAACGCGA
back to topCoding sequence (CDS) from alignment at chr11:11280..14679- >NO11G00060.2 ID=NO11G00060.2|Name=NO11G00060.2|organism=Nannochloropsis oceanica|type=CDS|length=1647bp|location=Sequence derived from alignment at chr11:11280..14679- (Nannochloropsis oceanica)
ATGTATGACACAGTCAGGGTGTTCGGGGAGAACATCGTGACGACAGAGGG
AGAGGTCTGGAGGCGGCACAGGTTTGTGGCGCGCGCGGCCTTCAGCGAGG
CTAACAACCGGTTGGTGTTTGAGACGGTCCAGGCGTGTGCGGGAGAGATG
ATGGACGCCTGGGAGAGGCAGAGGGAGGGAGGGAAAGAGAAAGGGCAGAA
CGAGGGAGGGAATAATGAAGGCTTTCGGGTGACATTGATGGAGGATATGA
CGCAACTGACCTTGGCCGTCATTAGCCAGGCCAGCTTTGGGCTTCAGCTG
GAGGCCGCCTATGGGAAGGAGAGGGAGGAGAAGGAGAAGGCAGAGAATGA
GGAGGGGAGGGGCGTGAAGGGGGGAAAGGATGGGCGGTACACCATGTCGT
TTACCAAGTGCATGCAAATGGTCTCCCATCACACGTTGGCTAAGGTCCTA
GTCCCCAGATTGCTCTTCTCCATGCCCTTCCTCCCCCGCCTACAGGAGAT
CGCCCGCGCCTACCGAGAATTCGATTGCCACTTGCTAGACAGCATCGATC
GGGAACGGAGCAGACAGGCAGGGATGGAGGGAGGGACATTGATGAAGGAG
GAAGGCGACGGGGAAGTGGCGCTAGACGGGTGCCGCAGACGATGGGGGGG
CTTGAGCCGGATGCAGTCCTTTCGGAGGAGGAAGGACGCGGGAGGGAGGA
AGGGAGGGCCAATGAAGAAGGAGGACCACATGGCCTGTGTCCGCTCTCCG
GAGCAGAAGGAGCAGGAGCGGCAGCACACCCAGCGTCGGCAGCAGAATCT
CTTCTCGCTTCTCGTCCAAGCCAACGACAAGGCCGACGACACCGCGGGCT
CGGGGGAGGTCGAGGAGGAGGGCGAGGGGAAGAAAAAGCGGGGGACGGTC
GACCGACTTAAACTGCAGGAGTTGCTGGGTAATGCCTTCATCTTCCTTCT
GGCGGGCCACGAGACGTCGGCGCACACGCTGATTTGGGCCCTCCTCCTCC
TCGCCCTCCACCCCGACGAACAAGCAGTCGCCCACGAGGAGGTCATCCGG
GTACTCGGCTCGCCCGCCCTCCCTTCCGACTCCTCCGACCCTTCTTCCTC
CCCCCTTCCCTCAATGACGTACGACCAGCTCTCCCTCCTCCCCTACTGCC
AAGGCGTCATGAACGAAGCCCTCCGCCTCTTTCCCCCGGTCACCATGATC
CCCAAGGTCTGTTCCGCCGACACCACCCTCACCCTCCCTCCCTCCTCCTC
CTCTCCCTCCTCCTCTTCTTCTTCGTTCCGAATTCCCAAGGGGGTCAATG
TTTTTCTGAATCTCTATGCTCTGCACCGCAATCCGAAGCACTACGCCGAG
CCCAACGCTTTCAAGCCGCGCCGGTGGGTGAAGCCGGAGGGGAAGGCGGA
AGGGGAGGCGAAGGGGAAGGCGGAGGGGAAGGAAGGGGGAGAAGAGGAGC
AGTTCGTGGGCATTGACTACTTTGCATTCGCGCCCTTTAGCCTGGGCGAG
AGGAGCTGCTTGGGGAGGAAGTTCGGACAGATCACCGTCATGGCCTCCTT
AGCTCTGCTGTTGCAGCGGTACGAGGTAGGGGTGGGGGGGGGAGGGAGGG
AGGAAAGGAGGGGGAGAGGTGGGAGGAGCGGAAGGCCCGGATGTTAA back to top
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