NO10G03440.1, NO10G03440.1 (mRNA) Nannochloropsis oceanica | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	NO10G03440.1
Unique Name	NO10G03440.1
Type	mRNA
Organism	Nannochloropsis oceanica (N. oceanica IMET1)
Sequence length	3162
Alignment location	chr10:974316..978976 -

Link to JBrowse

Properties

Mutants

Expression

No biomaterial libraries express this feature.

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
chr10	genome	chr10:974316..978976 -

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Gene prediction for N. oceanica IMET1	2017-10-24
Homology annotation for N. oceanica IMET1	2017-10-25
InterPro analysis for N. oceanica IMET1	2017-10-25

Annotated Terms

Homology

[Close]

BLAST of NO10G03440.1 vs.
Match: XP_005853421.1 (hypothetical protein NGA_0438900, partial [Nannochloropsis gaditana CCMP526]; EKU22940.1 hypothetical protein NGA_0438900, partial [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 951.4 bits (2458), Expect = 2.300e-273
Identity = 542/1101 (49.23%), Postives = 695/1101 (63.12%), Query Frame = 0

Query:    9 ESRRRRRRVLLGSLGAVCLIVGAALAITFAGKGQGKNKPEPAATVEGNLSPMGDL----------------PGLVKDSVLSTNAGTTGAAPKSNFLET-----------GTVGGVGLGAALGALPGASTVNGAFNGLASNLANLAGLRVCSPVDGPDLERMVAGSSTCGVILLTKGSMVPYFTENTMVVSTRKIIVGHPIDLPQIRTVGKLERVFDVVSGGSLDIRFVSVFKAYGRAPSEDLRIVAGGVALVRLGGFFRGTAVIFREPTQTFKAFQGALERPYQRRRKYGGHVLVLGGSFFCYGCQIIRWNPYGGILLNVFQLGRDFLVVAGTSVMTGVYHLAFTPFGSAVSVGNAIAVLGGVSVRIGGGTEGVAILKGQFGAGQNIFVGGGVLVNVGHQQQTAFVCL------------------------------------VYSNGAGVMDKTGGEVVNSAISAFQALAGGSALV--------------ICLVRSQKILGAEVFQGA------------------------------GFHTEVNNTRWTIQLVNAQMPGYEGWIGLGASLMIRSRTTVRRLVNYRAAKKVAWVVNGVGVNESLRSNFNIFTDKNGTTVLKPHAKNGKHRLLEAVDELV----SSAASTSNRRALIKGF-SRPALSMADSVMDSKKVQPPNPGILAEKLQALVSGLKNKRRLKGQAAVNPTRIMNMFQGLSPASLMKAWQEAVDETNNNNALG-SNTNDRALAAGNDADEVDADGRWGEQVYVGGGDASQCVLCGVGPGTTESHWNRDAGDDPATCHITEACTPADSVQGIMGKLRGALPDGEDLVLSPAAKGWAKTVGS-----KYTARLLQDIDDHQAENPGADIKLPDTNILTYDIFLYCPVADAECEYSQANMKAAFQDYLDDVAQEETAFKISSATAAVHPAISKIVNDADGDFVSAIGAPAL-EGCGKGLSFSLFVTAPDKSSVTDVKTILEKAGTDSDELLAFINDQGEQEASFCSVSVTKRSAMFFPSVDTAAGKSFYQKLYTGNALDSGSLWPDITVVSAHEVAPVQHAVADQSYTLLLEGFAMKAEVVVELFQGTQSSG 991
            ++ RRRRRVLL SLGA+CLIV  ALAI F  KG+ K+   P A   G +S + D+                P  V + V +  +  + + P    + T           G      +G   GALPGA+ VNGAFN LA++ A+LAGL+VC P  GP+L+ MV   S+C V++L KGS   Y   +T++V++  II+GHPID PQI     + R+FDV +G  +DIRFVS+F+   R    +  ++  G  LVR GG+FRG+ VIFR+  QTF+ F   L  P   +R  GG VLV GG+FFCYGCQIIRW PYG   +N+ ++GRD+LV+AGTSV  G YH+A  PF S+V+VGNA+ VLGGV +R+GGGT G A+LKGQFGAG+N+FVGGGVLVNVGHQQQTAFVCL                                    VYSNGAGV+DKTGGEVVN AIS FQALAGGS  +              + +   Q  +G   F GA                              GF T VNNTRWTIQ+VNA +PGYEGWIGLGA+L +RSRTTVRR+VN+R     AWVVNG GV  S     NIF +K+G  + KP+    K RLL AVDE+V     S  +T    A IK F  RPA+ MA+S MDS +++PP+P ILA K+ ++V+ LK+KRRL+GQA VNPTR+MNM  GLSPA LM+AW+EA +ETN N  L     N RALA   D   VD +GRW EQVYVGG + +QCV+CGVGPG + SHW+   G+D ATCH+TE CT   S + I+   + ALP  E+LVL P AKG AK +GS     KYT R+LQ +++HQ  NPGA+ KLPD NIL Y++ LYC   DA+C ++QA+MKAA + +L + A EE+AF ++++T  VHPA+   V +A  +F+ ++ AP+   GCGKGL F++ +TAPD +SV D++ I E   ++ + LL  IN   E++  FC V V+K S +FFPS+DTA G  FYQ L+TGN LD GSLWPD+T+VS HEVAPVQHAV  Q YT+LLE FAMK +VVVELFQGT+  G
Sbjct:   14 QAPRRRRRVLLISLGALCLIVVGALAIGFGIKGKDKSNEAPTAAETGPISSLADITDALTPTAPDSAPITAPATVVEPVKAPASTASESKPSDLTIATKEDESDKLISFGDGERNFIGPLFGALPGAAAVNGAFNTLAASAASLAGLQVCYPETGPELKAMVESGSSCSVVILKKGSSYIYLLPSTVMVTSSVIILGHPIDPPQIHPEKGVYRLFDVAAGSHIDIRFVSLFRPALRNVGGNRSLIVAGCVLVRTGGYFRGSGVIFRQQAQTFEGFVKGLMDPLAPKRIVGGFVLVAGGAFFCYGCQIIRWAPYGAPNINLVEVGRDYLVLAGTSVCIGCYHVACAPFQSSVNVGNAVGVLGGVGIRVGGGTIGAAVLKGQFGAGENLFVGGGVLVNVGHQQQTAFVCLNRANFGMTAVGSGVMVLIAELENRAWGVAAITGAGQVYSNGAGVLDKTGGEVVNCAISFFQALAGGSVYLGTGDMNMVGEQFARVAVTLDQNGVGMTFFNGAGQTSLIYVPSFVAAVARSQKILGAEGFLGAGFFTNVNNTRWTIQVVNAGIPGYEGWIGLGAALFVRSRTTVRRVVNFR-FNPYAWVVNGQGVPGSAYRENNIFVNKDGIRINKPNP--SKSRLLAAVDEMVDGHLKSKRNTQGLLAGIKNFVDRPAVVMANSEMDSARMRPPDPQILAGKILSMVTSLKHKRRLQGQAVVNPTRMMNMLAGLSPAKLMEAWKEATEETNRNPLLSLVQGNSRALAETADPTAVDENGRWAEQVYVGGKE-TQCVMCGVGPGPSSSHWS-TGGNDTATCHVTEECTSRSSFRDILAAAKNALPQNEELVLPPVAKGVAKALGSTDLAPKYTRRILQMMEEHQEANPGAEPKLPDHNILAYELSLYCNADDADCSFNQADMKAAVKLFLGEQADEESAFNVAASTTDVHPALIDYVKEASSEFLDSVKAPSHGSGCGKGLKFNVQMTAPDAASVKDLQKIFEGVASNGESLLDTINKYDERDVPFCDVKVSKPSTLFFPSIDTAQGIKFYQGLFTGNVLDKGSLWPDVTLVSPHEVAPVQHAVVGQPYTVLLENFAMKGDVVVELFQGTEKKG 1109

The following BLAST results are available for this feature:

BLAST of NO10G03440.1 vs.

BLAST of NO10G03440.1 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 1


Match Name	E-value	Identity	Description
XP_005853421.1	2.300e-273	49.23	hypothetical protein NGA_0438900, partial [Nannoch...	[more]

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
NO10G03440	NO10G03440	Nannochloropsis oceanica (N. oceanica IMET1)	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
NO10G03440.1	NO10G03440.1-protein	Nannochloropsis oceanica (N. oceanica IMET1)	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
NO10G03440.1.cds1	NO10G03440.1.cds1	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO10G03440.1.cds2	NO10G03440.1.cds2	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO10G03440.1.cds3	NO10G03440.1.cds3	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO10G03440.1.cds4	NO10G03440.1.cds4	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO10G03440.1.cds5	NO10G03440.1.cds5	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO10G03440.1.cds6	NO10G03440.1.cds6	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO10G03440.1.cds7	NO10G03440.1.cds7	Nannochloropsis oceanica (N. oceanica IMET1)	CDS

Sequences

The following sequences are available for this feature:

mRNA sequence
protein sequence
mRNA from alignment at chr10:974316..978976-
coding sequence from alignment at chr10:974316..978976-

mRNA sequence

>NO10G03440.1 ID=NO10G03440.1|Name=NO10G03440.1|organism=Nannochloropsis oceanica|type=mRNA|length=3162bp
ATGAACGAGGCCGGGCCCCAAGAGGAGTCCCGACGCCGTCGCCGGCGTGT
TCTACTGGGCTCGCTGGGTGCAGTGTGTCTGATCGTCGGTGCCGCGTTGG
CCATAACCTTTGCTGGAAAGGGCCAGGGCAAGAATAAGCCGGAGCCGGCG
GCCACTGTAGAGGGGAATTTGTCTCCGATGGGAGACCTTCCAGGCCTTGT
GAAGGATTCAGTGCTGTCAACCAACGCGGGCACCACCGGTGCCGCTCCGA
AATCCAACTTCCTCGAAACCGGCACGGTGGGAGGCGTTGGCCTCGGCGCG
GCACTGGGTGCTTTGCCCGGGGCCTCGACCGTGAATGGAGCCTTCAACGG
CTTGGCGAGTAATTTGGCCAACCTGGCAGGCCTTCGTGTCTGCTCTCCCG
TGGATGGTCCTGATCTGGAGCGAATGGTGGCGGGCTCGAGCACTTGCGGC
GTCATTCTCCTGACGAAGGGCTCTATGGTCCCATACTTCACGGAGAACAC
GATGGTTGTGTCAACCCGCAAGATTATCGTGGGCCACCCTATTGACCTTC
CTCAAATTAGGACGGTAGGGAAACTAGAGCGGGTCTTTGACGTGGTGTCG
GGGGGCTCCTTGGACATTCGTTTCGTGAGCGTCTTCAAAGCATACGGCCG
AGCACCCTCAGAGGACCTCCGTATCGTCGCCGGGGGTGTTGCGTTGGTGC
GCTTGGGAGGCTTCTTCCGCGGTACGGCCGTGATTTTCCGCGAGCCTACT
CAGACTTTCAAAGCCTTTCAAGGCGCGCTGGAGCGCCCCTATCAGCGTCG
CCGCAAGTATGGCGGGCACGTCCTGGTCTTGGGAGGCTCCTTCTTTTGTT
ACGGATGTCAGATAATCCGGTGGAACCCTTATGGCGGGATTCTTTTGAAC
GTTTTCCAGCTTGGTCGTGATTTCTTGGTTGTTGCCGGGACGAGCGTCAT
GACTGGCGTCTATCATTTGGCCTTCACACCTTTCGGAAGCGCAGTCAGCG
TTGGAAATGCTATCGCTGTCCTGGGCGGCGTCAGTGTTCGCATTGGCGGC
GGAACAGAGGGGGTTGCGATTCTCAAGGGACAATTTGGTGCCGGCCAGAA
TATATTCGTGGGCGGTGGGGTGCTCGTGAATGTGGGCCATCAGCAGCAGA
CCGCCTTTGTGTGCCTTGTGTACTCCAACGGCGCGGGCGTTATGGACAAG
ACTGGTGGAGAGGTCGTCAACAGTGCTATTTCGGCCTTCCAAGCCCTGGC
CGGCGGGTCCGCTTTGGTGATTTGCCTCGTCCGTTCTCAGAAGATTCTCG
GTGCCGAGGTCTTCCAAGGAGCCGGGTTTCACACAGAAGTCAACAATACA
CGCTGGACAATTCAATTGGTGAATGCGCAAATGCCGGGTTATGAAGGCTG
GATCGGGCTGGGTGCCTCTCTGATGATCCGGTCGCGGACCACTGTCAGGC
GTCTGGTGAACTACCGCGCTGCCAAGAAAGTGGCTTGGGTGGTGAATGGG
GTCGGTGTCAACGAATCGCTGAGGAGCAACTTCAACATTTTTACCGACAA
GAACGGCACGACAGTCCTGAAGCCGCACGCTAAAAATGGCAAGCACCGAC
TCCTGGAAGCTGTGGATGAACTTGTGAGCAGTGCTGCCAGCACATCCAAC
AGGCGGGCCCTTATTAAAGGTTTTAGTCGTCCTGCTTTGAGCATGGCCGA
CAGTGTGATGGACTCGAAGAAGGTTCAGCCTCCTAACCCCGGGATTCTGG
CCGAAAAACTGCAGGCCCTGGTGTCGGGTTTGAAGAATAAACGCCGTCTC
AAAGGGCAAGCCGCGGTCAACCCCACCCGTATCATGAACATGTTCCAAGG
CCTGTCGCCAGCCTCGCTCATGAAAGCTTGGCAAGAGGCCGTGGACGAGA
CTAACAACAACAATGCTCTCGGTAGCAACACCAACGATCGTGCCTTGGCT
GCAGGAAACGATGCCGACGAGGTGGACGCCGACGGCCGGTGGGGCGAACA
GGTGTACGTGGGCGGCGGTGATGCCTCGCAGTGTGTGCTGTGCGGGGTCG
GTCCCGGGACGACCGAGTCCCACTGGAACAGGGACGCAGGCGACGACCCA
GCCACCTGCCATATCACGGAGGCATGCACTCCTGCAGATTCAGTCCAAGG
CATCATGGGGAAGCTCAGAGGAGCCTTGCCGGATGGGGAAGACTTAGTAT
TGTCGCCCGCGGCGAAGGGCTGGGCCAAGACGGTGGGCTCCAAGTACACG
GCGCGTCTCTTGCAAGATATCGACGATCACCAGGCGGAGAATCCCGGGGC
GGATATCAAGCTGCCGGACACGAACATTTTGACCTACGACATTTTCCTGT
ACTGCCCCGTGGCCGATGCGGAGTGTGAGTATAGCCAGGCAAACATGAAG
GCGGCATTCCAAGACTATCTCGACGATGTGGCGCAGGAGGAGACTGCGTT
CAAGATTTCGTCGGCGACTGCAGCGGTGCATCCGGCTATCTCTAAAATTG
TGAATGATGCTGACGGAGACTTTGTGTCGGCCATTGGGGCGCCGGCGCTA
GAGGGGTGTGGGAAGGGCCTCTCGTTTTCTCTTTTCGTGACGGCGCCCGA
CAAATCTTCGGTGACGGATGTGAAGACTATCCTGGAAAAAGCAGGTACCG
ACAGTGATGAACTTCTGGCCTTCATCAACGACCAAGGGGAGCAGGAAGCA
TCCTTCTGCAGCGTGAGCGTGACGAAGCGCTCAGCAATGTTTTTCCCGTC
CGTGGACACGGCGGCAGGGAAGAGCTTCTATCAGAAGCTTTACACGGGCA
ACGCGCTGGATTCCGGGAGCCTCTGGCCCGACATCACGGTGGTGTCGGCG
CACGAGGTGGCCCCCGTTCAGCACGCAGTGGCGGATCAGTCCTACACACT
TTTGTTGGAGGGCTTTGCCATGAAGGCGGAAGTGGTGGTGGAGCTGTTCC
AGGGCACGCAGAGCAGCGGGGTGGAGGTGGCCAGGGTCCCTGGTGGCATG
GGCATCGGCGAGACACGCGAGGTGGCTTGGACGGCTCCTGCGCCCATGAA
TGGGGACGGTGGGAATCGGGCTTACGTGCGCGCCTACCACGTTGGGATGC
CGGGCATCTTTGCACAGAGCGAGGTCTTTGATCTCTTGCCCTTGTCTGTG
CTGGATGACTAA

protein sequence of NO10G03440.1

>NO10G03440.1-protein ID=NO10G03440.1-protein|Name=NO10G03440.1|organism=Nannochloropsis oceanica|type=polypeptide|length=1054bp
MNEAGPQEESRRRRRRVLLGSLGAVCLIVGAALAITFAGKGQGKNKPEPA
ATVEGNLSPMGDLPGLVKDSVLSTNAGTTGAAPKSNFLETGTVGGVGLGA
ALGALPGASTVNGAFNGLASNLANLAGLRVCSPVDGPDLERMVAGSSTCG
VILLTKGSMVPYFTENTMVVSTRKIIVGHPIDLPQIRTVGKLERVFDVVS
GGSLDIRFVSVFKAYGRAPSEDLRIVAGGVALVRLGGFFRGTAVIFREPT
QTFKAFQGALERPYQRRRKYGGHVLVLGGSFFCYGCQIIRWNPYGGILLN
VFQLGRDFLVVAGTSVMTGVYHLAFTPFGSAVSVGNAIAVLGGVSVRIGG
GTEGVAILKGQFGAGQNIFVGGGVLVNVGHQQQTAFVCLVYSNGAGVMDK
TGGEVVNSAISAFQALAGGSALVICLVRSQKILGAEVFQGAGFHTEVNNT
RWTIQLVNAQMPGYEGWIGLGASLMIRSRTTVRRLVNYRAAKKVAWVVNG
VGVNESLRSNFNIFTDKNGTTVLKPHAKNGKHRLLEAVDELVSSAASTSN
RRALIKGFSRPALSMADSVMDSKKVQPPNPGILAEKLQALVSGLKNKRRL
KGQAAVNPTRIMNMFQGLSPASLMKAWQEAVDETNNNNALGSNTNDRALA
AGNDADEVDADGRWGEQVYVGGGDASQCVLCGVGPGTTESHWNRDAGDDP
ATCHITEACTPADSVQGIMGKLRGALPDGEDLVLSPAAKGWAKTVGSKYT
ARLLQDIDDHQAENPGADIKLPDTNILTYDIFLYCPVADAECEYSQANMK
AAFQDYLDDVAQEETAFKISSATAAVHPAISKIVNDADGDFVSAIGAPAL
EGCGKGLSFSLFVTAPDKSSVTDVKTILEKAGTDSDELLAFINDQGEQEA
SFCSVSVTKRSAMFFPSVDTAAGKSFYQKLYTGNALDSGSLWPDITVVSA
HEVAPVQHAVADQSYTLLLEGFAMKAEVVVELFQGTQSSGVEVARVPGGM
GIGETREVAWTAPAPMNGDGGNRAYVRAYHVGMPGIFAQSEVFDLLPLSV
LDD*

mRNA from alignment at chr10:974316..978976-

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>NO10G03440.1 ID=NO10G03440.1|Name=NO10G03440.1|organism=Nannochloropsis oceanica|type=mRNA|length=4661bp|location=Sequence derived from alignment at chr10:974316..978976- (Nannochloropsis oceanica)
ATGAACGAGGCCGGGCCCCAAGAGGAGTCCCGACGCCGTCGCCGGCGTGT
TCTACTGGGCTCGCTGGGTGCAGTGTGTCTGATCGTCGGTGCCGCGTTGG
CCATAACCTTTGCTGGAAAGGGCCAGGGCAAGAATAAGCCGGAGCCGGCG
GCCACTGTAGAGGGGAATTTGTCTCCGATGGGAGACCTTCCAGGCCTTGT
GAAGGATTCAGGTGAGAAAACATAAGGGAGGACGGCAGGAAATGGAGGGT
GCACACCCTGTGCGCAGAACTGACCCCCTGAGTTGACCTCTTGGAGCTCT
AGTGGTGGTAGTGCTGGTGGTGCTGCCCGCACTATCTGAATGTGTACAAT
GTCGAGCCCCCTCATTGAATGTATCTTCTTATGCCTTCGACGAACGTATC
TTGTGTCCCTGCCATTCTCTTCTTGGCCGCTTTAATCGCATCAAGGGGCA
GCTCCGACACCTCCGGTGCACCGATTCTTTGCCGGCTTTGCTTCCCTAAC
TCGCTCCTTTTGCCCTCTCCTTTTCCCCCTCTTGCACCGCTCTGATGATC
AGCAGCATTACCCCTTACCATAACGATTCAATCGTTTCTCTGACACATCT
CCGTTTCCCACCTCCCTCTCTCCTGCGCTACAGTGCTGTCAACCAACGCG
GGCACCACCGGTGCCGCTCCGAAATCCGTAGGTACGACGGTGACGCCCGC
TGTCCCACAGCATCGAAGGCAGCGCCTGCTGAGGGTACTGGCGACCTCAC
GTTTCAGAACTTCCTCGAAACCGGCACGGTGGGAGGCGTTGGCCTCGGCG
CGGCACTGGGTGCTTTGCCCGGGGCCTCGACCGTGAATGGAGCCTTCAAC
GGCTTGGCGAGTAATTTGGCCAACCTGGCAGGCCTTCGTGTCTGCTCTCC
CGTGGATGGTCCTGATCTGGAGCGAATGGTGGCGGGCTCGAGCACTTGCG
GCGTCATTCTCCTGACGAAGGGCTCTATGGTCCCATACTTCACGGAGAAC
ACGATGGTTGTGTCAACCCGCAAGATTATCGTGGGCCACCCTATTGACCT
TCCTCAAATTAGGACGGTAGGGAAACTAGAGCGGGTCTTTGACGTGGTGT
CGGGGGGCTCCTTGGACATTCGTTTCGTGAGCGTCTTCAAAGCATACGGC
CGAGCACCCTCAGAGGACCTCCGTATCGTCGCCGGGGGTGTTGCGTTGGT
GCGCTTGGGAGGCTTCTTCCGCGGTACGGCCGTGATTTTCCGCGAGCCTA
CTCAGACTTTCAAAGCCTTTCAAGGCGCGCTGGAGCGCCCCTATCAGCGT
CGCCGCAAGTATGGCGGGCACGTCCTGGTCTTGGGAGGCTCCTTCTTTTG
TTACGGATGTCAGATAATCCGGTGGAACCCTTATGGCGGGATTCTTTTGA
ACGTTTTCCAGCTTGGTCGTGATTTCTTGGTTGTTGCCGGGACGAGCGTC
ATGACTGGCGTCTATCATTTGGCCTTCACACCTTTCGGAAGCGCAGTCAG
CGTTGGAAATGCTATCGCTGTCCTGGGCGGCGTCAGTGTTCGCATTGGCG
GCGGAACAGAGGGGGTTGCGATTCTCAAGGGACAATTTGGTAGGTCGTGC
GTGGGTGAAGGAGACGAGGGATAGAAGGGGAACAGTAGCAAAAAGGCATT
CAATAGCATCATGACAGGTCATCATTGGCGAAGTAGGAAAGCCTTGGACG
CACGAAAGCCTTGGACGCACCTAACACTCATCCCCAACCAAAATACACAC
ACGAACATAATCATACTCGCGCACGACAGGTGCCGGCCAGAATATATTCG
TGGGCGGTGGGGTGCTCGTGAATGTGGGCCATCAGCAGCAGACCGCCTTT
GTGTGCCTTGTGCGTGCGGGCTACGGCATGACTGCTATGGGTGCTGGGTG
TTTGTACTTATTGCGGAGCTTGAGAACCGTGCGTGGGGTGTGGCTTCCAT
CTTCGGTGCCGGGCAGGTGTACTCCAACGGCGCGGGCGTTATGGACAAGA
CTGGTGGAGAGGTCGTCAACAGTGCTATTTCGGCCTTCCAAGCCCTGGCC
GGCGGGTCCGCGTACGTCAGATTTCTCTCTCTATACCCCGTTCCTTCTCT
CATGTTTCATTGCTTACAGAGGAGACTAGAGTGTGTTTTTGTCTTGCTGA
AATATATGCAATACCTTTTGGGGGTTGTGTGACAGGAAGCGGCCAAGGTA
CAGCACTCACTCCATCCATATTTTTTTCCTCCTTCTATTTCTCCCACCCA
TGATAGCTATTTGGGCGCGGGTGACATGAACATTGTGGGCGAACAGTTTG
CGCGACTTGCTTTAACCCTGGACCAGAATGGCGTTGGCATGACTTTCTTT
AACGGGGCTGGGCACGGAACTATGATCTACGTCCCAGTTTGGTGATTTGC
CTCGTCCGTTCTCAGAAGATTCTCGGTGCCGAGGTACGTCTGGCTATGCG
AGATGCGAATTCCGTCTGTCCGTTTCGCGTTTTTGATGATCGATGTGTCT
GTCGGTCCCTCTCCTCTGATTCTAATTTTGGTTTTTGTCCTTGTCCTCGT
ATGTATTGTTTCGCCTCTCTGTGTTTCCTGTATCGATTGTGTTTGTGCCC
GCAACCTACCTGTCTCTGCACTCATCCACGGACTCTTAACTGAGTGCTCT
CGCGGGACTGAACCCTGGTAGTTGAAGGGCTTGTCTGTAATCTGTCGGCG
TTTTTTCCTCACACACACACACTCTCCCATCGCTTTCTTCGATGAATATG
CCCCCCATGAAGTGTGGTCTCATATATCTCTTTGATGTCTCACTCCAACT
TGTTTAGGTCTTCCAAGGAGCCGGGTTTCACACAGAAGTCAACAATACAC
GCTGGACAATTCAATTGGTGAATGCGCAAATGCCGGGTTATGAAGGCTGG
ATCGGGCTGGGTGCCTCTCTGATGATCCGGTCGCGGACCACTGTCAGGCG
TCTGGTGAACTACCGCGCTGCCAAGAAAGTGGCTTGGGTGGTGAATGGGG
TCGGTGTCAACGAATCGCTGAGGAGCAACTTCAACATTTTTACCGACAAG
AACGGCACGACAGTCCTGAAGCCGCACGCTAAAAATGGCAAGCACCGACT
CCTGGAAGCTGTGGATGAACTTGTGAGCAGTGCTGCCAGCACATCCAACA
GGCGGGCCCTTATTAAAGGTTTTAGTCGTCCTGCTTTGAGCATGGCCGAC
AGTGTGATGGACTCGAAGAAGGTTCAGCCTCCTAACCCCGGGATTCTGGC
CGAAAAACTGCAGGCCCTGGTGTCGGGTTTGAAGAATAAACGCCGTCTCA
AAGGGCAAGCCGCGGTCAACCCCACCCGTATCATGAACATGTTCCAAGGC
CTGTCGCCAGCCTCGCTCATGAAAGCTTGGCAAGAGGCCGTGGACGAGAC
TAACAACAACAATGCTCTCGGTAGCAACACCAACGATCGTGCCTTGGCTG
CAGGAAACGATGCCGACGAGGTGGACGCCGACGGCCGGTGGGGCGAACAG
GTGTACGTGGGCGGCGGTGATGCCTCGCAGTGTGTGCTGTGCGGGGTCGG
TCCCGGGACGACCGAGTCCCACTGGAACAGGGACGCAGGCGACGACCCAG
CCACCTGCCATATCACGGAGGCATGCACTCCTGCAGATTCAGTCCAAGGC
ATCATGGGGAAGCTCAGAGGAGCCTTGCCGGATGGGGAAGACTTAGTATT
GTCGCCCGCGGCGAAGGGCTGGGCCAAGACGGTGGGCTCCAAGTACACGG
CGCGTCTCTTGCAAGATATCGACGATCACCAGGCGGAGAATCCCGGGGCG
GATATCAAGCTGCCGGACACGAACATTTTGACCTACGACATTTTCCTGTA
CTGCCCCGTGGCCGATGCGGAGTGTGAGTATAGCCAGGCAAACATGAAGG
CGGCATTCCAAGACTATCTCGACGATGTGGCGCAGGAGGAGACTGCGTTC
AAGATTTCGTCGGCGACTGCAGCGGTGCATCCGGCTATCTCTAAAATTGT
GAATGATGCTGACGGAGACTTTGTGTCGGCCATTGGGGCGCCGGCGCTAG
AGGGGTGTGGGAAGGGCCTCTCGTTTTCTCTTTTCGTGACGGCGCCCGAC
AAATCTTCGGTGACGGATGTGAAGACTATCCTGGAAAAAGCAGGTACCGA
CAGTGATGAACTTCTGGCCTTCATCAACGACCAAGGGGAGCAGGAAGCAT
CCTTCTGCAGCGTGAGCGTGACGAAGCGCTCAGCAATGTTTTTCCCGTCC
GTGGACACGGCGGCAGGGAAGAGCTTCTATCAGAAGCTTTACACGGGCAA
CGCGCTGGATTCCGGGAGCCTCTGGCCCGACATCACGGTGGTGTCGGCGC
ACGAGGTGGCCCCCGTTCAGCACGCAGTGGCGGATCAGTCCTACACACTT
TTGTTGGAGGGCTTTGCCATGAAGGCGGAAGTGGTGGTGGAGCTGTTCCA
GGGCACGCAGAGCAGCGGGGTGGAGGTGGCCAGGGTCCCTGGTGGCATGG
GCATCGGCGAGACACGCGAGGTGGCTTGGACGGCTCCTGCGCCCATGAAT
GGGGACGGTGGGAATCGGGCTTACGTGCGCGCCTACCACGTTGGGATGCC
GGGCATCTTTGCACAGAGCGAGGTCTTTGATCTCTTGCCCTTGTCTGTGC
TGGATGACTAA

Coding sequence (CDS) from alignment at chr10:974316..978976-

>NO10G03440.1 ID=NO10G03440.1|Name=NO10G03440.1|organism=Nannochloropsis oceanica|type=CDS|length=3162bp|location=Sequence derived from alignment at chr10:974316..978976- (Nannochloropsis oceanica)
ATGAACGAGGCCGGGCCCCAAGAGGAGTCCCGACGCCGTCGCCGGCGTGT
TCTACTGGGCTCGCTGGGTGCAGTGTGTCTGATCGTCGGTGCCGCGTTGG
CCATAACCTTTGCTGGAAAGGGCCAGGGCAAGAATAAGCCGGAGCCGGCG
GCCACTGTAGAGGGGAATTTGTCTCCGATGGGAGACCTTCCAGGCCTTGT
GAAGGATTCAGTGCTGTCAACCAACGCGGGCACCACCGGTGCCGCTCCGA
AATCCAACTTCCTCGAAACCGGCACGGTGGGAGGCGTTGGCCTCGGCGCG
GCACTGGGTGCTTTGCCCGGGGCCTCGACCGTGAATGGAGCCTTCAACGG
CTTGGCGAGTAATTTGGCCAACCTGGCAGGCCTTCGTGTCTGCTCTCCCG
TGGATGGTCCTGATCTGGAGCGAATGGTGGCGGGCTCGAGCACTTGCGGC
GTCATTCTCCTGACGAAGGGCTCTATGGTCCCATACTTCACGGAGAACAC
GATGGTTGTGTCAACCCGCAAGATTATCGTGGGCCACCCTATTGACCTTC
CTCAAATTAGGACGGTAGGGAAACTAGAGCGGGTCTTTGACGTGGTGTCG
GGGGGCTCCTTGGACATTCGTTTCGTGAGCGTCTTCAAAGCATACGGCCG
AGCACCCTCAGAGGACCTCCGTATCGTCGCCGGGGGTGTTGCGTTGGTGC
GCTTGGGAGGCTTCTTCCGCGGTACGGCCGTGATTTTCCGCGAGCCTACT
CAGACTTTCAAAGCCTTTCAAGGCGCGCTGGAGCGCCCCTATCAGCGTCG
CCGCAAGTATGGCGGGCACGTCCTGGTCTTGGGAGGCTCCTTCTTTTGTT
ACGGATGTCAGATAATCCGGTGGAACCCTTATGGCGGGATTCTTTTGAAC
GTTTTCCAGCTTGGTCGTGATTTCTTGGTTGTTGCCGGGACGAGCGTCAT
GACTGGCGTCTATCATTTGGCCTTCACACCTTTCGGAAGCGCAGTCAGCG
TTGGAAATGCTATCGCTGTCCTGGGCGGCGTCAGTGTTCGCATTGGCGGC
GGAACAGAGGGGGTTGCGATTCTCAAGGGACAATTTGGTGCCGGCCAGAA
TATATTCGTGGGCGGTGGGGTGCTCGTGAATGTGGGCCATCAGCAGCAGA
CCGCCTTTGTGTGCCTTGTGTACTCCAACGGCGCGGGCGTTATGGACAAG
ACTGGTGGAGAGGTCGTCAACAGTGCTATTTCGGCCTTCCAAGCCCTGGC
CGGCGGGTCCGCTTTGGTGATTTGCCTCGTCCGTTCTCAGAAGATTCTCG
GTGCCGAGGTCTTCCAAGGAGCCGGGTTTCACACAGAAGTCAACAATACA
CGCTGGACAATTCAATTGGTGAATGCGCAAATGCCGGGTTATGAAGGCTG
GATCGGGCTGGGTGCCTCTCTGATGATCCGGTCGCGGACCACTGTCAGGC
GTCTGGTGAACTACCGCGCTGCCAAGAAAGTGGCTTGGGTGGTGAATGGG
GTCGGTGTCAACGAATCGCTGAGGAGCAACTTCAACATTTTTACCGACAA
GAACGGCACGACAGTCCTGAAGCCGCACGCTAAAAATGGCAAGCACCGAC
TCCTGGAAGCTGTGGATGAACTTGTGAGCAGTGCTGCCAGCACATCCAAC
AGGCGGGCCCTTATTAAAGGTTTTAGTCGTCCTGCTTTGAGCATGGCCGA
CAGTGTGATGGACTCGAAGAAGGTTCAGCCTCCTAACCCCGGGATTCTGG
CCGAAAAACTGCAGGCCCTGGTGTCGGGTTTGAAGAATAAACGCCGTCTC
AAAGGGCAAGCCGCGGTCAACCCCACCCGTATCATGAACATGTTCCAAGG
CCTGTCGCCAGCCTCGCTCATGAAAGCTTGGCAAGAGGCCGTGGACGAGA
CTAACAACAACAATGCTCTCGGTAGCAACACCAACGATCGTGCCTTGGCT
GCAGGAAACGATGCCGACGAGGTGGACGCCGACGGCCGGTGGGGCGAACA
GGTGTACGTGGGCGGCGGTGATGCCTCGCAGTGTGTGCTGTGCGGGGTCG
GTCCCGGGACGACCGAGTCCCACTGGAACAGGGACGCAGGCGACGACCCA
GCCACCTGCCATATCACGGAGGCATGCACTCCTGCAGATTCAGTCCAAGG
CATCATGGGGAAGCTCAGAGGAGCCTTGCCGGATGGGGAAGACTTAGTAT
TGTCGCCCGCGGCGAAGGGCTGGGCCAAGACGGTGGGCTCCAAGTACACG
GCGCGTCTCTTGCAAGATATCGACGATCACCAGGCGGAGAATCCCGGGGC
GGATATCAAGCTGCCGGACACGAACATTTTGACCTACGACATTTTCCTGT
ACTGCCCCGTGGCCGATGCGGAGTGTGAGTATAGCCAGGCAAACATGAAG
GCGGCATTCCAAGACTATCTCGACGATGTGGCGCAGGAGGAGACTGCGTT
CAAGATTTCGTCGGCGACTGCAGCGGTGCATCCGGCTATCTCTAAAATTG
TGAATGATGCTGACGGAGACTTTGTGTCGGCCATTGGGGCGCCGGCGCTA
GAGGGGTGTGGGAAGGGCCTCTCGTTTTCTCTTTTCGTGACGGCGCCCGA
CAAATCTTCGGTGACGGATGTGAAGACTATCCTGGAAAAAGCAGGTACCG
ACAGTGATGAACTTCTGGCCTTCATCAACGACCAAGGGGAGCAGGAAGCA
TCCTTCTGCAGCGTGAGCGTGACGAAGCGCTCAGCAATGTTTTTCCCGTC
CGTGGACACGGCGGCAGGGAAGAGCTTCTATCAGAAGCTTTACACGGGCA
ACGCGCTGGATTCCGGGAGCCTCTGGCCCGACATCACGGTGGTGTCGGCG
CACGAGGTGGCCCCCGTTCAGCACGCAGTGGCGGATCAGTCCTACACACT
TTTGTTGGAGGGCTTTGCCATGAAGGCGGAAGTGGTGGTGGAGCTGTTCC
AGGGCACGCAGAGCAGCGGGGTGGAGGTGGCCAGGGTCCCTGGTGGCATG
GGCATCGGCGAGACACGCGAGGTGGCTTGGACGGCTCCTGCGCCCATGAA
TGGGGACGGTGGGAATCGGGCTTACGTGCGCGCCTACCACGTTGGGATGC
CGGGCATCTTTGCACAGAGCGAGGTCTTTGATCTCTTGCCCTTGTCTGTG
CTGGATGACTAA

Synonyms

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