NO10G02950.1, NO10G02950.1 (mRNA) Nannochloropsis oceanica

Overview
NameNO10G02950.1
Unique NameNO10G02950.1
TypemRNA
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1953
Alignment locationchr10:819783..821933 +

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Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr10genomechr10:819783..821933 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. oceanica IMET12017-10-24
Homology annotation for N. oceanica IMET12017-10-25
InterPro analysis for N. oceanica IMET12017-10-25
Annotated Terms
Homology
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BLAST of NO10G02950.1 vs.
Match: EWM25495.1 (nicotinate-nucleotide adenylyltransferase [Nannochloropsis gaditana])

HSP 1 Score: 464.2 bits (1193), Expect = 5.500e-127
Identity = 249/344 (72.38%), Postives = 281/344 (81.69%), Query Frame = 0 
Query:  108 MPQEYGTFFSPNSPLAAWLRPKKSEDALEAGSLSHEDKSGAPSPLGGIAPGSPTLFHNTPTNSDGSTPSFAAPESVLLFGLSANPPTGQAGHAGIVKFLKAQNQWDEIWVLPVYKHMHVKNRLLVDFEDRFQMCRLNFLPPPS-SSSSITASPSA---PAKSRTRVRVTRLEKEVADHYIEEAAARGKGPEAVKVGTIDVVMYAKERLPNTEFSLVLGTDTFNDMKKGKWKRGRELLDLVSVVIVSRPGVSYALQDDDVTNPRLHFFNVPSLGEVSSTAVRKTTDLRLLREVLEPRVLEYIRERGLYALGRVEGGMGWGAGGGGAGGGRTSASSFYSYTSGKRG 448
            MPQEYGTFF+P S L +WLR  KSEDALEAG+ + EDKS APSP G   PGSP +   TP     + P   AP SVLLFGLSANPPTGQAGHAGIV+FL+ Q+QWDEIWV+PVYKHMH KN  LVDFEDR+QMCRLNF  P S  +SS +ASP +   P  +RTRV+V RLEKEVA ++I EAAARG+GPE VKVGTIDVV+YAKER+PNT+FSLVLGTDTFNDMK+GKWKRGRELLDLVSVV++SRPGV YA Q+D+  N  LHF+NVPSLGEVSSTAVRKTTDLRLLREVLEPRVLEYIRERGLY +GR+EG      GGG  G GR+S SSFYSYTSGK+G
Sbjct:    1 MPQEYGTFFAPPSKLTSWLRANKSEDALEAGT-APEDKSSAPSPCGAF-PGSPLM---TPNALAQTGP---APASVLLFGLSANPPTGQAGHAGIVRFLREQDQWDEIWVMPVYKHMHAKNHQLVDFEDRYQMCRLNFTCPSSYGASSYSASPPSAKGPPTTRTRVKVVRLEKEVAKNFIAEAAARGQGPETVKVGTIDVVLYAKERMPNTDFSLVLGTDTFNDMKRGKWKRGRELLDLVSVVVISRPGVPYAPQEDEFLNHNLHFYNVPSLGEVSSTAVRKTTDLRLLREVLEPRVLEYIRERGLYTIGRIEG------GGGLGGAGRSSVSSFYSYTSGKKG 330
The following BLAST results are available for this feature:
BLAST of NO10G02950.1 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 1
Match NameE-valueIdentityDescription
EWM25495.15.500e-12772.38nicotinate-nucleotide adenylyltransferase [Nannoch... [more]
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
NO10G02950NO10G02950Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
NO10G02950.1NO10G02950.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
NO10G02950.1.cds1NO10G02950.1.cds1Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO10G02950.1.cds2NO10G02950.1.cds2Nannochloropsis oceanica (N. oceanica IMET1)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>NO10G02950.1 ID=NO10G02950.1|Name=NO10G02950.1|organism=Nannochloropsis oceanica|type=mRNA|length=1953bp
CTTTTCTCGTTGCTTGATGCCTGTGTGGTTGCGTGTGGGGTGTTTGATGG
TGAGACGCGTGGGACAAGAATGCAGAATTCGCAACCCGCCTCGTTGTTGT
GATAATGATGGTGATGATTCGGAGGGCTCGAGAGGCAGTGGACGCGGGAA
GCTGGACCAGCCCCTGTCTGATGGGCAAAACGGCACCTGGAGAAGGATCA
GCAGGTGTGACGAGCTCATACGTGGTATATTTGGTGGCGGTGTGGGTGAA
GATGCTCTATTATTGCTAGAGCGTGAGAGAAGAAGCATGGGTCTGAAATT
CAAATCTCGAGCGACCGACTGCAAGGGGGATGGTCCCCTTGGGCGAGGCC
CTAGCCTGGATCCATCCCATTTACTTGTCTATACGATGACCGATATGTCC
TTTATATGCCTTGGATAGTGTTGGTTTCTCGTCTCTTTTGTGAGCCGCGG
TGGGATTGGCTCTTTTGTTTGAGCTCCAAGGCGAGTGCAAATCGCATCAT
CATAACAAGGAACACGACATGGGAAGCTCTTGCGCTTGCTTGCCTCCTTC
ACAACCTCACTTTGCCTCCTCTCCCGATGCCCTCGATTTCAGCAGGCACA
AGTTTATCGTCATCCAGCAGCAGAAAAGTAGCCAGTAGTCTAGCCGCACC
TGTCGCCCTCCTCAGCCCCGCCCCCTCGTCATTAAATTTTGTCCTCCTTA
GACCTCCAACTACCACCACACCAAGCATGCCTCAAGAGTACGGTACATTC
TTCTCCCCCAACTCCCCCCTGGCCGCATGGCTCCGCCCAAAGAAAAGCGA
GGACGCCTTGGAAGCCGGCTCGTTGTCACATGAAGACAAAAGCGGTGCCC
CGTCCCCCCTCGGGGGGATTGCTCCCGGCTCTCCGACCCTTTTCCACAAT
ACCCCCACCAATAGCGACGGCAGCACGCCTAGTTTTGCTGCCCCTGAGTC
TGTCCTTCTGTTCGGTTTGTCCGCTAATCCGCCAACCGGGCAAGCAGGGC
ATGCAGGCATCGTCAAGTTCCTTAAGGCGCAGAACCAATGGGATGAGATT
TGGGTGCTTCCTGTCTATAAACACATGCATGTCAAGAACCGCTTGTTGGT
CGACTTTGAAGACCGCTTTCAGATGTGTCGTTTGAATTTCCTCCCCCCTC
CATCTTCTTCCTCCTCTATCACCGCCTCCCCTTCGGCCCCTGCCAAGTCC
CGGACCCGTGTGCGTGTCACGCGTTTGGAGAAAGAAGTAGCGGATCACTA
CATAGAAGAAGCAGCGGCCAGGGGAAAGGGTCCCGAGGCGGTGAAGGTGG
GGACGATCGACGTGGTGATGTATGCGAAGGAACGGTTGCCGAACACGGAG
TTTAGTTTGGTGTTGGGCACCGACACTTTCAACGACATGAAAAAAGGAAA
ATGGAAACGTGGCCGCGAGCTCCTCGACCTCGTTTCTGTCGTCATCGTCT
CCCGTCCTGGAGTATCATACGCCCTGCAAGACGATGACGTGACCAACCCG
CGGCTGCACTTTTTTAACGTGCCTTCCCTAGGCGAGGTGTCTTCAACGGC
AGTCCGAAAAACGACGGACTTGAGATTATTGCGTGAGGTACTAGAGCCCA
GGGTACTGGAGTACATTCGAGAGAGAGGGCTGTACGCTTTGGGGAGGGTG
GAGGGAGGGATGGGCTGGGGGGCTGGGGGAGGAGGAGCAGGGGGGGGGAG
GACGTCTGCGTCGTCGTTTTATAGTTACACAAGTGGGAAGAGAGGGGGGG
GGGAGGGGGCAGGGGAGGAGGAGAGGGGGGGAAGCATCTGGAGGGTGTGG
ACGAGGGGACGGGCTTGTTGGGAGAGGGGGGAAGGGGGGGGGCTTAGGGA
AAGGGAGAGGGGGAGGGAGAGCTTGGTGGAGGTCTGGGAAGGTGCTGTGG
ACGATGGTAACGGCGCTTGTGTTGTGCACCGGGCTTTTGTTGGTATCCCG
TAG
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protein sequence of NO10G02950.1

>NO10G02950.1-protein ID=NO10G02950.1-protein|Name=NO10G02950.1|organism=Nannochloropsis oceanica|type=polypeptide|length=516bp
MPWIVLVSRLFCEPRWDWLFCLSSKASANRIIITRNTTWEALALACLLHN
LTLPPLPMPSISAGTSLSSSSSRKVASSLAAPVALLSPAPSSLNFVLLRP
PTTTTPSMPQEYGTFFSPNSPLAAWLRPKKSEDALEAGSLSHEDKSGAPS
PLGGIAPGSPTLFHNTPTNSDGSTPSFAAPESVLLFGLSANPPTGQAGHA
GIVKFLKAQNQWDEIWVLPVYKHMHVKNRLLVDFEDRFQMCRLNFLPPPS
SSSSITASPSAPAKSRTRVRVTRLEKEVADHYIEEAAARGKGPEAVKVGT
IDVVMYAKERLPNTEFSLVLGTDTFNDMKKGKWKRGRELLDLVSVVIVSR
PGVSYALQDDDVTNPRLHFFNVPSLGEVSSTAVRKTTDLRLLREVLEPRV
LEYIRERGLYALGRVEGGMGWGAGGGGAGGGRTSASSFYSYTSGKRGGGE
GAGEEERGGSIWRVWTRGRACWERGEGGGLRERERGRESLVEVWEGAVDD
GNGACVVHRAFVGIP*
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mRNA from alignment at chr10:819783..821933+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>NO10G02950.1 ID=NO10G02950.1|Name=NO10G02950.1|organism=Nannochloropsis oceanica|type=mRNA|length=2151bp|location=Sequence derived from alignment at chr10:819783..821933+ (Nannochloropsis oceanica)
CTTTTCTCGTTGCTTGATGCCTGTGTGGTTGCGTGTGGGGTGTTTGATGG
TGAGACGCGTGGGACAAGAATGCAGAATTCGCAACCCGCCTCGTTGTTGT
GATAATGATGGTGATGATTCGGAGGGCTCGAGAGGCAGTGGACGCGGGAA
GCTGGACCAGCCCCTGTCTGATGGGCAAAACGGCACCTGGAGAAGGATCA
GCAGGTGTGACGAGCTCATACGTGGTATATTTGGTGGCGGTGTGGGTGAA
GATGCTCTATTATTGCTAGAGCGTGAGAGAAGAAGCATGGGTCTGAAATT
CAAATCTCGAGCGACCGACTGCAAGGGGGATGGTCCCCTTGGGCGAGGCC
CTAGCCTGGATCCATCCCATTTACTTGTCTATACGATGACCGATATGTCC
TTTATATGCCTTGGATAGTGTTGGTTTCTCGTCTCTTTTGTGAGCCGCGG
TGGGATTGGCTCTTTTGTTTGAGCTCCAAGGCGAGTGCAAATCGCATCAT
CATAACAAGGAACACGACATGGGAAGCTCTTGCGCTTGCTTGCCTCCTTC
ACAACCTCACTTTGCCTCCTCTCCCGATGCCCTCGATTTCAGCAGGCACA
AGTTTATCGTCATCCAGCAGCAGAAAAGTAGCCAGTAGTCTAGCCGCACC
TGTCGCCCTCCTCAGCCCCGCCCCCTCGTCATTAAATTTTGTCCTCCTTA
GACCTCCAACTACCACCACACCAAGCATGCCTCAAGAGTACGGTACATTC
TTCTCCCCCAACTCCCCCCTGGCCGCATGGCTCCGCCCAAAGAAAAGCGA
GGACGCCTTGGAAGCCGGCTCGTTGTCACATGAAGACAAAAGCGGTGCCC
CGTCCCCCCTCGGGGGGATTGCTCCCGGCTCTCCGACCCTTTTCCACAAT
ACCCCCACCAATAGCGACGGCAGCACGCCTAGTTTTGCTGCCCCTGAGTC
TGTCCTTCTGTTCGGTTTGTCCGCTAATCCGCCAACCGGGCAAGCAGGGC
ATGCAGGCATCGTCAAGTTCCTTAAGGCGCAGAACCAATGGGATGAGATT
TGGGTGCTTCCTGTCTATAAACACATGCATGTCAAGAACCGCTTGTTGGT
CGACTTTGAAGACCGCTTTCAGATGTGTCGTTTGAATTTCCTCCCCCCTC
CATCTTCTTCCTCCTCTATCACCGCCTCCCCTTCGGCCCCTGCCAAGTCC
CGGACCCGTGTGCGTGTCACGCGTTTGGAGAAAGAAGTAGCGGATCACTA
CATAGAAGAAGCAGCGGCCAGGGGAAAGGGTCCCGAGGCGGTGAAGGTGG
GGACGATCGACGTGGTGATGTATGCGAAGGAACGGTTGCCGAACACGGAG
TTTAGTTTGGTGTTGGGTGAGTGGGGGAAGGGAGGGAGGGAGAGAGGCTG
GGGCGTCAGGAAGGGAAACCTTGGTTGACCCTTAACGATACAGTTAGGAA
GTTCTCTCCCCAAGTCAATGCTTCTACTACTGCTCCACTCACTAATGATG
GCATCTTTACTCCAAACGGCCTCGCCCCTCCCCCCTGCGATCTGTCTTTA
CCATCACCCTCCAGGCACCGACACTTTCAACGACATGAAAAAAGGAAAAT
GGAAACGTGGCCGCGAGCTCCTCGACCTCGTTTCTGTCGTCATCGTCTCC
CGTCCTGGAGTATCATACGCCCTGCAAGACGATGACGTGACCAACCCGCG
GCTGCACTTTTTTAACGTGCCTTCCCTAGGCGAGGTGTCTTCAACGGCAG
TCCGAAAAACGACGGACTTGAGATTATTGCGTGAGGTACTAGAGCCCAGG
GTACTGGAGTACATTCGAGAGAGAGGGCTGTACGCTTTGGGGAGGGTGGA
GGGAGGGATGGGCTGGGGGGCTGGGGGAGGAGGAGCAGGGGGGGGGAGGA
CGTCTGCGTCGTCGTTTTATAGTTACACAAGTGGGAAGAGAGGGGGGGGG
GAGGGGGCAGGGGAGGAGGAGAGGGGGGGAAGCATCTGGAGGGTGTGGAC
GAGGGGACGGGCTTGTTGGGAGAGGGGGGAAGGGGGGGGGCTTAGGGAAA
GGGAGAGGGGGAGGGAGAGCTTGGTGGAGGTCTGGGAAGGTGCTGTGGAC
GATGGTAACGGCGCTTGTGTTGTGCACCGGGCTTTTGTTGGTATCCCGTA
G
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Coding sequence (CDS) from alignment at chr10:819783..821933+

>NO10G02950.1 ID=NO10G02950.1|Name=NO10G02950.1|organism=Nannochloropsis oceanica|type=CDS|length=1548bp|location=Sequence derived from alignment at chr10:819783..821933+ (Nannochloropsis oceanica)
ATGCCTTGGATAGTGTTGGTTTCTCGTCTCTTTTGTGAGCCGCGGTGGGA
TTGGCTCTTTTGTTTGAGCTCCAAGGCGAGTGCAAATCGCATCATCATAA
CAAGGAACACGACATGGGAAGCTCTTGCGCTTGCTTGCCTCCTTCACAAC
CTCACTTTGCCTCCTCTCCCGATGCCCTCGATTTCAGCAGGCACAAGTTT
ATCGTCATCCAGCAGCAGAAAAGTAGCCAGTAGTCTAGCCGCACCTGTCG
CCCTCCTCAGCCCCGCCCCCTCGTCATTAAATTTTGTCCTCCTTAGACCT
CCAACTACCACCACACCAAGCATGCCTCAAGAGTACGGTACATTCTTCTC
CCCCAACTCCCCCCTGGCCGCATGGCTCCGCCCAAAGAAAAGCGAGGACG
CCTTGGAAGCCGGCTCGTTGTCACATGAAGACAAAAGCGGTGCCCCGTCC
CCCCTCGGGGGGATTGCTCCCGGCTCTCCGACCCTTTTCCACAATACCCC
CACCAATAGCGACGGCAGCACGCCTAGTTTTGCTGCCCCTGAGTCTGTCC
TTCTGTTCGGTTTGTCCGCTAATCCGCCAACCGGGCAAGCAGGGCATGCA
GGCATCGTCAAGTTCCTTAAGGCGCAGAACCAATGGGATGAGATTTGGGT
GCTTCCTGTCTATAAACACATGCATGTCAAGAACCGCTTGTTGGTCGACT
TTGAAGACCGCTTTCAGATGTGTCGTTTGAATTTCCTCCCCCCTCCATCT
TCTTCCTCCTCTATCACCGCCTCCCCTTCGGCCCCTGCCAAGTCCCGGAC
CCGTGTGCGTGTCACGCGTTTGGAGAAAGAAGTAGCGGATCACTACATAG
AAGAAGCAGCGGCCAGGGGAAAGGGTCCCGAGGCGGTGAAGGTGGGGACG
ATCGACGTGGTGATGTATGCGAAGGAACGGTTGCCGAACACGGAGTTTAG
TTTGGTGTTGGGCACCGACACTTTCAACGACATGAAAAAAGGAAAATGGA
AACGTGGCCGCGAGCTCCTCGACCTCGTTTCTGTCGTCATCGTCTCCCGT
CCTGGAGTATCATACGCCCTGCAAGACGATGACGTGACCAACCCGCGGCT
GCACTTTTTTAACGTGCCTTCCCTAGGCGAGGTGTCTTCAACGGCAGTCC
GAAAAACGACGGACTTGAGATTATTGCGTGAGGTACTAGAGCCCAGGGTA
CTGGAGTACATTCGAGAGAGAGGGCTGTACGCTTTGGGGAGGGTGGAGGG
AGGGATGGGCTGGGGGGCTGGGGGAGGAGGAGCAGGGGGGGGGAGGACGT
CTGCGTCGTCGTTTTATAGTTACACAAGTGGGAAGAGAGGGGGGGGGGAG
GGGGCAGGGGAGGAGGAGAGGGGGGGAAGCATCTGGAGGGTGTGGACGAG
GGGACGGGCTTGTTGGGAGAGGGGGGAAGGGGGGGGGCTTAGGGAAAGGG
AGAGGGGGAGGGAGAGCTTGGTGGAGGTCTGGGAAGGTGCTGTGGACGAT
GGTAACGGCGCTTGTGTTGTGCACCGGGCTTTTGTTGGTATCCCGTAG
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Synonyms
Publications