NO10G02790.1, NO10G02790.1 (mRNA) Nannochloropsis oceanica

Overview
NameNO10G02790.1
Unique NameNO10G02790.1
TypemRNA
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length5565
Alignment locationchr10:764774..770613 -

Link to JBrowse

Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr10genomechr10:764774..770613 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. oceanica IMET12017-10-24
Homology annotation for N. oceanica IMET12017-10-25
InterPro analysis for N. oceanica IMET12017-10-25
Annotated Terms
Homology
BLAST of NO10G02790.1 vs.
Match: EWM25503.1 (d-2-hydroxyglutarate mitochondrial precursor [Nannochloropsis gaditana])

HSP 1 Score: 691.8 bits (1784), Expect = 1.900e-195
Identity = 353/507 (69.63%), Postives = 405/507 (79.88%), Query Frame = 0
Query:  111 PASSSSNHGKIILPPSSPDDDDLLTPYTQDWTRKWKAPACPAVLQPCTTEQVSALLAYCNGRGIAVVPQGGNTGLVGGSIPTGNEVVLSLSRMNEIISFDPLSSVLTCEAGCILEHLSLFLRPHQHIMPLDLGAKGSCQIGGNVSTNAGGLRYLRYGSLHGNVLGLEVVLADGEVLNLLSTLRKDNTGYDLKQLFIGAEGTLGVITKISMHVPPAPAAVNVALVGLNSFEQVKTMVGRTREKLGEILSAMELLDAQSMEMVVGKKEWGLRNPLALSAAAAVDAGGGGGSEVGSEVSPYPFYILLETAGSNEEHDEQKLENLLTLALEEDIIADGTLAQDVSQANDIWKLRELIPVAIEEEGRVHKYDVSVPLDRFYELVERTREGLREEGFGVATAQSAGAPAGGRKKGEEVKVVGYGHLGDSNLHLNVSVPRNKPDPPGVSRVLGRVLPWVMKQEGSVSAEHGLGQLKKEYLPLTKSRAAVAAMRGMKKMLDPKGILNPGKFFPEE 618
            P S SS  GK++L PS PDD++LL PYTQDWT KWKAP CPAVLQP TTEQV+ LL +C  R + VVPQGGNTGLVGG IP  NEV+LSL+ MN+IISFD  S +L CEAGC+LE L  +LRPH +IMPLDLGAKGSCQIGGNVSTNAGGLR+LRYGSLHG+VLGLEVVLADG VL++LSTLRKDNTG DLKQ+FIGAEGTLGVITK+S+ VPPAPAAV VALVGL SFE+V+ MV  ++ KLGEILSAMEL+DA +M++VVGK  WGLRNPLA          GG G+       P+PFY+LLET+GS E HD +K+E LL  ALE  ++ DGT+AQD++QA +IWKLRELIPVA+EEEGRVHK+DVS+PL  FY LVERTRE L EEG GV   +  G           V+VVGYGHLGDSNLHLNVSVPR  PDPP VSRV+ RVLPWVM+ +GSVSAEHGLGQLKK YL  TKS+  V  MRGMKKMLDPKGILNPGKFFP++
Sbjct:  152 PRSPSSAAGKLLLAPSGPDDENLLAPYTQDWTHKWKAPQCPAVLQPRTTEQVAGLLRHCYERDLHVVPQGGNTGLVGGGIPLANEVILSLANMNQIISFDAASGILVCEAGCVLEELDAWLRPHGYIMPLDLGAKGSCQIGGNVSTNAGGLRFLRYGSLHGSVLGLEVVLADGRVLDMLSTLRKDNTGLDLKQIFIGAEGTLGVITKVSLQVPPAPAAVQVALVGLESFEKVREMVMLSKRKLGEILSAMELVDAAAMDVVVGKAAWGLRNPLA----------GGSGAN-----PPFPFYMLLETSGSGEAHDREKMEELLEAALEGGVVGDGTVAQDLAQAQEIWKLRELIPVAMEEEGRVHKFDVSLPLSAFYALVERTREAL-EEG-GVVMGEGGG-----------VRVVGYGHLGDSNLHLNVSVPREAPDPPEVSRVVSRVLPWVMEHKGSVSAEHGLGQLKKTYLLQTKSKEVVDVMRGMKKMLDPKGILNPGKFFPDD 630          
The following BLAST results are available for this feature:
BLAST of NO10G02790.1 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 1
Match NameE-valueIdentityDescription
EWM25503.11.900e-19569.63d-2-hydroxyglutarate mitochondrial precursor [Nann... [more]
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
NO10G02790NO10G02790Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
NO10G02790.1NO10G02790.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
NO10G02790.1.cds1NO10G02790.1.cds1Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO10G02790.1.cds2NO10G02790.1.cds2Nannochloropsis oceanica (N. oceanica IMET1)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>NO10G02790.1 ID=NO10G02790.1|Name=NO10G02790.1|organism=Nannochloropsis oceanica|type=mRNA|length=5565bp
TCTCCCTACAATTCCTATTCTGATGTATCTGCCTTGCTGACGATTGTTTC
TTATTTTTATTGCTTTACACCAACACCTTTCTATCTCTACTTTATCTTTA
CTCAAACTCTACCTCCGTCCCCCCCACCCATCCTCCCTCCCTTCTCCTTT
ACAACGCCACAAACCTCGAATAAATCGCCTCCCTAACCCTAAAATATGTC
TCGCTTAACGGCCCCTCAAGAGTCACTCTGTTGTCTTTCACCCTCACCAC
CGTCGTCCCATCACAAATCAGACTAGCCCCCTCGGGACCTACTTGAAACT
CAGGATTTACCCCCGCCTCTCTTAATTTCTGTCTTAACGACTGCCTTTGT
GAAGTCTCAGTTAAAAGCACATCGCCATCTGCTAGCAGAAACGGTGCTCT
CGTCCTCGGCATATTTATCATCTCCTCCCCCTCTCCCTCTACCCCTATCT
TCCCCCCTCCCTCCCGCAACACCCGCGCCGGCTGACACCGCACCAGAGGC
TTCCCATCCGCATCCATACTTGTTTCTGATGCCACCGCCCTCACAAGCGC
CAGCCGGTAATGCCCCATTTCCTTCAAAACCAACGGCGGAACCTTCTCAT
CCTCCTCTTCCCCCGCTCCCCAAGCTCTTTCCCCTGTCCCCTCCTCCTCC
AACCCCACATCCAAAACCTTACTATCAAACTGGAGCTGCACCGTCAACAC
CGCTGCCATCGCCGTTGCCGCCGCAGCCGCAGCAGTAGCAGTTGCGGCAG
CCGCAGCAGCAGCAGCAGCTGCTGCCACCGCACCTGCCTCTCCCTCGACC
ACAGGACCCCCATCAGAAGTACCTGCAGCAGCAGCAGCAGCAGCAGCAGC
AGCTCCAATCAGTCCTCCTAATCCACCACCCTGCTGCAACTGCTGCAGCT
GCAGCAGCTGCTGGAGTGGCGGCGTCCATACCTTTGTCGACCCTCCCAGC
ATCTTGCCTACATATCGGCTCAATTCTCCAAAACTCTCTTGGGTGCCATG
CACAAATATCACCCTCCTTGGCGCCAAATTTTGTAAAATCGCCCTCAGGT
TCTTCCCGTCCGTCCGCCCCTCCATGCTGAACGCCTTGACCTTCCACCTC
ACCTCGACCATCGACTCCTTCATTAGGAATTTCAAGGCATTCGTCCCTGC
TTTCACCTGCGCCTCCCCCTCCGTCATCAGAACATCATCCAAATAGCCCC
ATCGTTGCACCCCTCCCCCCCCAGCGCTTGGCCCCTGCAAAGCCAGCCCT
TGCAACATTCCCCTCGTTTCCTGCGCCATAGCCTTTGCTAGATCCACGCA
CTCCCCCTCCGCCAGGGGCTCACCATACGCATCTACTTCCACCGTTGCTG
CATCTCGACATCCAAACACCAGGTAACGCGGCCGTCGATACATCGCGGCA
GTTTTCCTTCTCCTCTTCGCCGTCGACGCACCCACCTTCCGAAGCGAAGA
CAGGGAGGATGAGGGCAAAGAGACACTCTCCTGTTCTTCATCCATGGCCG
CTCCCACCGTGCCCTCCATCAACTCATGCGCCTGTCTCCGGAACTCCTCC
ACTTCCAAGGCCCTCCTCCTCTCCCTCTCCTCTTTCTCTTTCAACCCTGC
CAGCTCCTCCCCCACAATCCTCTCGATTGTTGGCACACAAAACGACAAAC
TCGCCTTGGGCAAATGCCTCAATTTCCAGAAGCTTTCCGCCAGAGATCCC
TTTCTCAAGTGCCCGCACAATAACAACGCGTTCTCAGCCCCACTCGCCCA
TCTGGTTGCCAAGGCCCTCGAGAATCCCGTATCCATCCCTTCGTCACTCG
CCAACACCACCACCGGGTTCCGATATTCCCCCATGGCGGCTTCTAACTCC
AGCATGCTTTGGGCAGGAACGACGTGTTTGAGCGTGAAGGGATTGCGGAG
AGAGCGATCAAAAGCACGGATGACCTCAGGGTGCATCCATTCCACCATAG
ACTTGGTGAAATGAAGCACATTCCGAGCCATGTGGTGCAGTAACACTATT
TTATACCCAGACAGCAAACGGTCGGTGCGCCAATGTCCATTGAGAGTCAA
CAGGAGCTCTTGCACTCGACCAGAGGTCTCCACGGGGATGAGCACGTTCC
CACCCTTACGCAGCGTGGCGGTGACAGTGTCTAGAAATTCCGCCTCTACC
TTTCGTTCGTCCAACGGCATACCCTGTGCCGGCCGGGCATCGACAATCAC
CAACGAAGGCCTCTGTTCCTTATCCGAACTCAAAGCATTGAACGCCTCCA
CTGCCCCAGTCAGATGTCTCTCGCTCTTGAGACTGAAATCTACGGCATAC
AAGATCTCTTCCACCTTCTTGTAATTTACCCGCCAAAAGCACCCTCCTAA
CACCCGCCCCGCCGGGTATGGTGTCACGCTCAAGTAAAACCTCCCCTGCT
GTCGCACCTCCAAAGGCTGGGAGAACTTTAAGAGCTGGAACCTCGTCATA
GCGGCGTCGACATCGTCAAGAGTAAACGCCGGACAGCCCGCCGCGCCACT
CGCCGTGTCCATGCACTTGCTCAAATAAAGGTCATACAACACCATCTGGC
CCATCTTGAAAACGGGCTGCGTGCTATATATAGGAACGCCAGGGCCTAGA
TGCTTGGCGACCCATGGCAGGGCACCAAGGTGGGCTAGATCGGGAAAGGA
GAGAAGAACGAGCTGGACTTGGGCGAGGACAGGGAGGAGGGATTCGAGCA
TGCTTTCGTCCAGTTGGACGTCCCACCCGCAGTCGAGCAGAATGGTCGCT
TCCCCAACCTTAAGAAGATAGCATAGAGGTTCGTTATCTTGTGCGCCGTA
GAGGATGCGGAAGGTGAGGCCTTCGCCCGTGACTGTTGGTGGTGGTGGCG
GCGGGGGGAATGGTAGGGATGCTTGTGCCTTGAGAGAAGTGTACGATGAT
TGTATGGAGTCTTGGGAGGCAGGGTGAGGCGAGCCGCCGTCACGGGAAGG
ATCAATGTCCATGGCAGGAGGAGGAGCAGCAGGAGAAGCGGGGCCGGCGG
CGATGGCCGTCGTTGGCATGACCTCCCCTTTCACGTCCCCGTCGTCATCG
TCGGCTTCCATTGCTGCTTGTGTGTCAGCGGGTGCTATCTCCTCCACCTC
CTCCATAGCGGGTGCGCCACCGTCTTCCTCCTTCTTCTTGGTCGCGACCT
TGGGTGTCCTTGGTGGCATGGTTTGCCTGTGCCTGTGTGGTGTGGTTGGG
TAGGAGAAGGGAGCATCAGCAAGGAAGACGACGGGCGGCGTTCGATGATA
ATGGTAGAGCGGCTTTGACCAAGCTTTGCCAGCTTGGCCACGACAACCAG
CGCACCGGCACTTGTACAGCACGGCCAGCTATTGTATTGAGATGCCACAA
GTGCGCTGAGGGAGCTGCACTGGGTTTGTGGAGGGTGTAAGAGCAGGCAG
GGCAAGACAGCAGCGGGCAAACGGCAGCAACCGCCCGCCTCCTCTCTTCT
CGACGCGGACGCAAATGCCACCATCTCAACCGCGTCAAGGCACATTTACG
GAAACCACTACGACGGTTCAGAGTATCGCATCCTTTTCCTTGCGATTCCA
GCAGCGTAGACACGGCAACATGGAGCGCTTACGACCTCCCCAACCCCGAA
GACATGACGATCACATCTCTTGATGCAATGCACACATATCACAGAGGTCC
AACAGAGCAGGAGATGGCGAGGTCACCGATTATTTTCCTAGGCTGCACGG
CGAAGCAGGTGCGTCCGCGAGGGTTCGATCGAATGCGGGTCCGGCCTGTC
GCCTCAGTCTCCTGCCTCGTGTCGTCTAATGCGTCGTTCCACGCGCTAAC
CCATACAAGAGGCCATCGGCCACGCTTTGCCATCAGCCCGCAAGAGTCTC
GTGTCGCTTCCTTCAAATCTGCGTCGCTATCAACATCCGTTACCCCCGCC
GATATTGCCCACTTCCGAGCCATCTTGGACCCCCCCGCCTCCTCCAGCTC
AAATCATGGCAAGATCATCCTTCCCCCCTCCTCCCCCGACGATGATGACC
TTCTCACACCATATACCCAAGACTGGACCCGGAAATGGAAAGCTCCTGCA
TGTCCTGCCGTCCTTCAGCCCTGTACTACGGAGCAAGTGTCCGCGTTGCT
TGCCTATTGCAATGGGCGGGGCATTGCAGTGGTGCCCCAAGGAGGAAACA
CTGGCTTGGTGGGGGGGAGTATCCCTACAGGCAACGAAGTCGTCCTTTCC
CTGTCAAGGATGAACGAAATAATAAGTTTCGACCCCCTCTCCAGCGTCCT
AACCTGTGAAGCGGGCTGCATCCTCGAGCACCTCTCCCTCTTCCTCCGCC
CCCACCAGCACATCATGCCCTTGGACCTGGGTGCCAAAGGGTCCTGCCAA
ATCGGTGGCAATGTCAGCACCAACGCGGGCGGCCTCCGATATCTGCGGTA
CGGCTCTCTGCATGGAAATGTGTTGGGGCTCGAGGTGGTGCTAGCAGACG
GAGAGGTGCTCAATTTACTCTCTACTTTACGAAAGGACAACACGGGCTAT
GATCTCAAGCAATTATTTATTGGTGCCGAAGGGACGCTAGGTGTGATAAC
CAAGATATCTATGCATGTGCCACCGGCGCCAGCAGCAGTGAATGTGGCAC
TCGTGGGGTTGAATAGTTTCGAGCAGGTGAAGACGATGGTAGGGAGGACG
AGAGAAAAATTGGGGGAAATCTTGAGCGCGATGGAGTTGCTCGACGCTCA
GAGCATGGAGATGGTGGTGGGGAAGAAGGAGTGGGGTTTGCGTAATCCAC
TTGCTCTTTCCGCTGCAGCTGCTGTAGACGCAGGAGGGGGCGGAGGGAGC
GAGGTGGGAAGCGAGGTGTCGCCTTACCCTTTTTACATCCTCCTCGAAAC
CGCAGGCAGCAACGAAGAGCACGATGAACAAAAACTGGAAAACCTCCTCA
CCCTTGCGTTAGAAGAGGATATAATCGCCGATGGTACCCTCGCCCAAGAC
GTGAGCCAAGCCAATGATATTTGGAAGCTTAGGGAGTTGATCCCTGTGGC
GATAGAAGAAGAAGGAAGAGTACATAAATATGACGTTTCTGTGCCGTTAG
ATCGGTTTTATGAGTTGGTGGAGAGGACGAGGGAGGGATTGAGGGAGGAA
GGCTTTGGCGTGGCTACAGCACAATCGGCAGGCGCTCCTGCAGGGGGAAG
AAAGAAGGGAGAGGAGGTTAAAGTGGTGGGGTACGGGCATTTGGGGGATT
CGAATCTGCACCTGAATGTCTCAGTGCCGCGGAATAAGCCGGACCCCCCC
GGTGTAAGTCGTGTGCTTGGTAGGGTGTTGCCATGGGTTATGAAGCAGGA
GGGAAGCGTAAGTGCAGAGCATGGGCTAGGGCAGTTGAAGAAGGAGTACT
TGCCCTTGACGAAGAGTAGGGCGGCGGTGGCGGCGATGAGGGGGATGAAG
AAGATGCTGGATCCCAAAGGTATTCTTAATCCAGGGAAGTTTTTCCCGGA
GGAGAAGCCGTGAAGGAATGAAGAATTGAGTGAGGGCGGGATAAGGGGAG
GCGAAAAAGAGAAGAGAGCAAACGATGATGGTACATAAAATAAATGCACA
GAGGGTGAGCGATAG
back to top

protein sequence of NO10G02790.1

>NO10G02790.1-protein ID=NO10G02790.1-protein|Name=NO10G02790.1|organism=Nannochloropsis oceanica|type=polypeptide|length=620bp
MTITSLDAMHTYHRGPTEQEMARSPIIFLGCTAKQVRPRGFDRMRVRPVA
SVSCLVSSNASFHALTHTRGHRPRFAISPQESRVASFKSASLSTSVTPAD
IAHFRAILDPPASSSSNHGKIILPPSSPDDDDLLTPYTQDWTRKWKAPAC
PAVLQPCTTEQVSALLAYCNGRGIAVVPQGGNTGLVGGSIPTGNEVVLSL
SRMNEIISFDPLSSVLTCEAGCILEHLSLFLRPHQHIMPLDLGAKGSCQI
GGNVSTNAGGLRYLRYGSLHGNVLGLEVVLADGEVLNLLSTLRKDNTGYD
LKQLFIGAEGTLGVITKISMHVPPAPAAVNVALVGLNSFEQVKTMVGRTR
EKLGEILSAMELLDAQSMEMVVGKKEWGLRNPLALSAAAAVDAGGGGGSE
VGSEVSPYPFYILLETAGSNEEHDEQKLENLLTLALEEDIIADGTLAQDV
SQANDIWKLRELIPVAIEEEGRVHKYDVSVPLDRFYELVERTREGLREEG
FGVATAQSAGAPAGGRKKGEEVKVVGYGHLGDSNLHLNVSVPRNKPDPPG
VSRVLGRVLPWVMKQEGSVSAEHGLGQLKKEYLPLTKSRAAVAAMRGMKK
MLDPKGILNPGKFFPEEKP*
back to top

mRNA from alignment at chr10:764774..770613-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>NO10G02790.1 ID=NO10G02790.1|Name=NO10G02790.1|organism=Nannochloropsis oceanica|type=mRNA|length=5840bp|location=Sequence derived from alignment at chr10:764774..770613- (Nannochloropsis oceanica)
TCTCCCTACAATTCCTATTCTGATGTATCTGCCTTGCTGACGATTGTTTC TTATTTTTATTGCTTTACACCAACACCTTTCTATCTCTACTTTATCTTTA CTCAAACTCTACCTCCGTCCCCCCCACCCATCCTCCCTCCCTTCTCCTTT ACAACGCCACAAACCTCGAATAAATCGCCTCCCTAACCCTAAAATATGTC TCGCTTAACGGCCCCTCAAGAGTCACTCTGTTGTCTTTCACCCTCACCAC CGTCGTCCCATCACAAATCAGACTAGCCCCCTCGGGACCTACTTGAAACT CAGGATTTACCCCCGCCTCTCTTAATTTCTGTCTTAACGACTGCCTTTGT GAAGTCTCAGTTAAAAGCACATCGCCATCTGCTAGCAGAAACGGTGCTCT CGTCCTCGGCATATTTATCATCTCCTCCCCCTCTCCCTCTACCCCTATCT TCCCCCCTCCCTCCCGCAACACCCGCGCCGGCTGACACCGCACCAGAGGC TTCCCATCCGCATCCATACTTGTTTCTGATGCCACCGCCCTCACAAGCGC CAGCCGGTAATGCCCCATTTCCTTCAAAACCAACGGCGGAACCTTCTCAT CCTCCTCTTCCCCCGCTCCCCAAGCTCTTTCCCCTGTCCCCTCCTCCTCC AACCCCACATCCAAAACCTTACTATCAAACTGGAGCTGCACCGTCAACAC CGCTGCCATCGCCGTTGCCGCCGCAGCCGCAGCAGTAGCAGTTGCGGCAG CCGCAGCAGCAGCAGCAGCTGCTGCCACCGCACCTGCCTCTCCCTCGACC ACAGGACCCCCATCAGAAGTACCTGCAGCAGCAGCAGCAGCAGCAGCAGC AGCTCCAATCAGTCCTCCTAATCCACCACCCTGCTGCAACTGCTGCAGCT GCAGCAGCTGCTGGAGTGGCGGCGTCCATACCTTTGTCGACCCTCCCAGC ATCTTGCCTACATATCGGCTCAATTCTCCAAAACTCTCTTGGGTGCCATG CACAAATATCACCCTCCTTGGCGCCAAATTTTGTAAAATCGCCCTCAGGT TCTTCCCGTCCGTCCGCCCCTCCATGCTGAACGCCTTGACCTTCCACCTC ACCTCGACCATCGACTCCTTCATTAGGAATTTCAAGGCATTCGTCCCTGC TTTCACCTGCGCCTCCCCCTCCGTCATCAGAACATCATCCAAATAGCCCC ATCGTTGCACCCCTCCCCCCCCAGCGCTTGGCCCCTGCAAAGCCAGCCCT TGCAACATTCCCCTCGTTTCCTGCGCCATAGCCTTTGCTAGATCCACGCA CTCCCCCTCCGCCAGGGGCTCACCATACGCATCTACTTCCACCGTTGCTG CATCTCGACATCCAAACACCAGGTAACGCGGCCGTCGATACATCGCGGCA GTTTTCCTTCTCCTCTTCGCCGTCGACGCACCCACCTTCCGAAGCGAAGA CAGGGAGGATGAGGGCAAAGAGACACTCTCCTGTTCTTCATCCATGGCCG CTCCCACCGTGCCCTCCATCAACTCATGCGCCTGTCTCCGGAACTCCTCC ACTTCCAAGGCCCTCCTCCTCTCCCTCTCCTCTTTCTCTTTCAACCCTGC CAGCTCCTCCCCCACAATCCTCTCGATTGTTGGCACACAAAACGACAAAC TCGCCTTGGGCAAATGCCTCAATTTCCAGAAGCTTTCCGCCAGAGATCCC TTTCTCAAGTGCCCGCACAATAACAACGCGTTCTCAGCCCCACTCGCCCA TCTGGTTGCCAAGGCCCTCGAGAATCCCGTATCCATCCCTTCGTCACTCG CCAACACCACCACCGGGTTCCGATATTCCCCCATGGCGGCTTCTAACTCC AGCATGCTTTGGGCAGGAACGACGTGTTTGAGCGTGAAGGGATTGCGGAG AGAGCGATCAAAAGCACGGATGACCTCAGGGTGCATCCATTCCACCATAG ACTTGGTGAAATGAAGCACATTCCGAGCCATGTGGTGCAGTAACACTATT TTATACCCAGACAGCAAACGGTCGGTGCGCCAATGTCCATTGAGAGTCAA CAGGAGCTCTTGCACTCGACCAGAGGTCTCCACGGGGATGAGCACGTTCC CACCCTTACGCAGCGTGGCGGTGACAGTGTCTAGAAATTCCGCCTCTACC TTTCGTTCGTCCAACGGCATACCCTGTGCCGGCCGGGCATCGACAATCAC CAACGAAGGCCTCTGTTCCTTATCCGAACTCAAAGCATTGAACGCCTCCA CTGCCCCAGTCAGATGTCTCTCGCTCTTGAGACTGAAATCTACGGCATAC AAGATCTCTTCCACCTTCTTGTAATTTACCCGCCAAAAGCACCCTCCTAA CACCCGCCCCGCCGGGTATGGTGTCACGCTCAAGTAAAACCTCCCCTGCT GTCGCACCTCCAAAGGCTGGGAGAACTTTAAGAGCTGGAACCTCGTCATA GCGGCGTCGACATCGTCAAGAGTAAACGCCGGACAGCCCGCCGCGCCACT CGCCGTGTCCATGCACTTGCTCAAATAAAGGTCATACAACACCATCTGGC CCATCTTGAAAACGGGCTGCGTGCTATATATAGGAACGCCAGGGCCTAGA TGCTTGGCGACCCATGGCAGGGCACCAAGGTGGGCTAGATCGGGAAAGGA GAGAAGAACGAGCTGGACTTGGGCGAGGACAGGGAGGAGGGATTCGAGCA TGCTTTCGTCCAGTTGGACGTCCCACCCGCAGTCGAGCAGAATGGTCGCT TCCCCAACCTTAAGAAGATAGCATAGAGGTTCGTTATCTTGTGCGCCGTA GAGGATGCGGAAGGTGAGGCCTTCGCCCGTGACTGTTGGTGGTGGTGGCG GCGGGGGGAATGGTAGGGATGCTTGTGCCTTGAGAGAAGTGTACGATGAT TGTATGGAGTCTTGGGAGGCAGGGTGAGGCGAGCCGCCGTCACGGGAAGG ATCAATGTCCATGGCAGGAGGAGGAGCAGCAGGAGAAGCGGGGCCGGCGG CGATGGCCGTCGTTGGCATGACCTCCCCTTTCACGTCCCCGTCGTCATCG TCGGCTTCCATTGCTGCTTGTGTGTCAGCGGGTGCTATCTCCTCCACCTC CTCCATAGCGGGTGCGCCACCGTCTTCCTCCTTCTTCTTGGTCGCGACCT TGGGTGTCCTTGGTGGCATGGTTTGCCTGTGCCTGTGTGGTGTGGTTGGG TAGGAGAAGGGAGCATCAGCAAGGAAGACGACGGGCGGCGTTCGATGATA ATGGTAGAGCGGCTTTGACCAAGCTTTGCCAGCTTGGCCACGACAACCAG CGCACCGGCACTTGTACAGCACGGCCAGCTATTGTATTGAGATGCCACAA GTGCGCTGAGGGAGCTGCACTGGGTTTGTGGAGGGTGTAAGAGCAGGCAG GGCAAGACAGCAGCGGGCAAACGGCAGCAACCGCCCGCCTCCTCTCTTCT CGACGCGGACGCAAATGCCACCATCTCAACCGCGTCAAGGCACATTTACG GAAACCACTACGACGGTTCAGAGTATCGCATCCTTTTCCTTGCGATTCCA GCAGCGTAGACACGGCAACATGGAGCGCTTACGACCTCCCCAACCCCGAA GACATGACGATCACATCTCTTGATGCAATGCACACATATCACAGAGGTCC AACAGAGCAGGAGATGGCGAGGTCACCGATTATTTTCCTAGGCTGCACGG CGAAGCAGGTGCGTCCGCGAGGGTTCGATCGAATGCGGGTCCGGCCTGTC GCCTCAGTCTCCTGCCTCGTGTCGTCTAATGCGTCGTTCCACGCGCTAAC CCATACAAGAGGCCATCGGCCACGCTTTGCCATCAGCCCGCAAGAGTCTC GTGTCGCTTCCTTCAAATCTGCGTCGCTATCAACATCCGTTACCCCCGCC GATATTGCCCACTTCCGAGCCATCTTGGACCCCCCCGCCTCCTCCAGCTC AAATCATGGCAAGATCATCCTTCCCCCCTCCTCCCCCGACGATGATGACC TTCTCACACCATATACCCAAGACTGGACCCGGAAATGGAAAGCTCCTGCA TGTCCTGCCGTCCTTCAGCCCTGTACTACGGAGCAAGTGTCCGCGTTGCT TGCCTATTGCAATGGGCGGGGCATTGCAGTGGTGCCCCAAGGAGGAAACA CTGGCTTGGTGGGGGGGAGTATCCCTACAGGTACACGACCTCTCCTTTCA ATGACATTAAATATTCCCTCTTTTCGTCCTTACTTACCATCTCCTCTCCC TGTAAGAAGTGGACTGATTCTCTTCCATTCATGGGTGAATGAGACAACAA TCCCTTTCGACCCCTTTCTAGCGTTCCGATCTATGTAGCGGGCCGCATCC TCGAATATCTTTCTCTCTTTACTTCCATTCCATACCCGTAAACCTAGCGC ACAAACATCTAATGAATACTACCCCCCCCCCCGGCTCCTTCACTCCCTCC CACAGGCAACGAAGTCGTCCTTTCCCTGTCAAGGATGAACGAAATAATAA GTTTCGACCCCCTCTCCAGCGTCCTAACCTGTGAAGCGGGCTGCATCCTC GAGCACCTCTCCCTCTTCCTCCGCCCCCACCAGCACATCATGCCCTTGGA CCTGGGTGCCAAAGGGTCCTGCCAAATCGGTGGCAATGTCAGCACCAACG CGGGCGGCCTCCGATATCTGCGGTACGGCTCTCTGCATGGAAATGTGTTG GGGCTCGAGGTGGTGCTAGCAGACGGAGAGGTGCTCAATTTACTCTCTAC TTTACGAAAGGACAACACGGGCTATGATCTCAAGCAATTATTTATTGGTG CCGAAGGGACGCTAGGTGTGATAACCAAGATATCTATGCATGTGCCACCG GCGCCAGCAGCAGTGAATGTGGCACTCGTGGGGTTGAATAGTTTCGAGCA GGTGAAGACGATGGTAGGGAGGACGAGAGAAAAATTGGGGGAAATCTTGA GCGCGATGGAGTTGCTCGACGCTCAGAGCATGGAGATGGTGGTGGGGAAG AAGGAGTGGGGTTTGCGTAATCCACTTGCTCTTTCCGCTGCAGCTGCTGT AGACGCAGGAGGGGGCGGAGGGAGCGAGGTGGGAAGCGAGGTGTCGCCTT ACCCTTTTTACATCCTCCTCGAAACCGCAGGCAGCAACGAAGAGCACGAT GAACAAAAACTGGAAAACCTCCTCACCCTTGCGTTAGAAGAGGATATAAT CGCCGATGGTACCCTCGCCCAAGACGTGAGCCAAGCCAATGATATTTGGA AGCTTAGGGAGTTGATCCCTGTGGCGATAGAAGAAGAAGGAAGAGTACAT AAATATGACGTTTCTGTGCCGTTAGATCGGTTTTATGAGTTGGTGGAGAG GACGAGGGAGGGATTGAGGGAGGAAGGCTTTGGCGTGGCTACAGCACAAT CGGCAGGCGCTCCTGCAGGGGGAAGAAAGAAGGGAGAGGAGGTTAAAGTG GTGGGGTACGGGCATTTGGGGGATTCGAATCTGCACCTGAATGTCTCAGT GCCGCGGAATAAGCCGGACCCCCCCGGTGTAAGTCGTGTGCTTGGTAGGG TGTTGCCATGGGTTATGAAGCAGGAGGGAAGCGTAAGTGCAGAGCATGGG CTAGGGCAGTTGAAGAAGGAGTACTTGCCCTTGACGAAGAGTAGGGCGGC GGTGGCGGCGATGAGGGGGATGAAGAAGATGCTGGATCCCAAAGGTATTC TTAATCCAGGGAAGTTTTTCCCGGAGGAGAAGCCGTGAAGGAATGAAGAA TTGAGTGAGGGCGGGATAAGGGGAGGCGAAAAAGAGAAGAGAGCAAACGA TGATGGTACATAAAATAAATGCACAGAGGGTGAGCGATAG
back to top

Coding sequence (CDS) from alignment at chr10:764774..770613-

>NO10G02790.1 ID=NO10G02790.1|Name=NO10G02790.1|organism=Nannochloropsis oceanica|type=CDS|length=1860bp|location=Sequence derived from alignment at chr10:764774..770613- (Nannochloropsis oceanica)
ATGACGATCACATCTCTTGATGCAATGCACACATATCACAGAGGTCCAAC
AGAGCAGGAGATGGCGAGGTCACCGATTATTTTCCTAGGCTGCACGGCGA
AGCAGGTGCGTCCGCGAGGGTTCGATCGAATGCGGGTCCGGCCTGTCGCC
TCAGTCTCCTGCCTCGTGTCGTCTAATGCGTCGTTCCACGCGCTAACCCA
TACAAGAGGCCATCGGCCACGCTTTGCCATCAGCCCGCAAGAGTCTCGTG
TCGCTTCCTTCAAATCTGCGTCGCTATCAACATCCGTTACCCCCGCCGAT
ATTGCCCACTTCCGAGCCATCTTGGACCCCCCCGCCTCCTCCAGCTCAAA
TCATGGCAAGATCATCCTTCCCCCCTCCTCCCCCGACGATGATGACCTTC
TCACACCATATACCCAAGACTGGACCCGGAAATGGAAAGCTCCTGCATGT
CCTGCCGTCCTTCAGCCCTGTACTACGGAGCAAGTGTCCGCGTTGCTTGC
CTATTGCAATGGGCGGGGCATTGCAGTGGTGCCCCAAGGAGGAAACACTG
GCTTGGTGGGGGGGAGTATCCCTACAGGCAACGAAGTCGTCCTTTCCCTG
TCAAGGATGAACGAAATAATAAGTTTCGACCCCCTCTCCAGCGTCCTAAC
CTGTGAAGCGGGCTGCATCCTCGAGCACCTCTCCCTCTTCCTCCGCCCCC
ACCAGCACATCATGCCCTTGGACCTGGGTGCCAAAGGGTCCTGCCAAATC
GGTGGCAATGTCAGCACCAACGCGGGCGGCCTCCGATATCTGCGGTACGG
CTCTCTGCATGGAAATGTGTTGGGGCTCGAGGTGGTGCTAGCAGACGGAG
AGGTGCTCAATTTACTCTCTACTTTACGAAAGGACAACACGGGCTATGAT
CTCAAGCAATTATTTATTGGTGCCGAAGGGACGCTAGGTGTGATAACCAA
GATATCTATGCATGTGCCACCGGCGCCAGCAGCAGTGAATGTGGCACTCG
TGGGGTTGAATAGTTTCGAGCAGGTGAAGACGATGGTAGGGAGGACGAGA
GAAAAATTGGGGGAAATCTTGAGCGCGATGGAGTTGCTCGACGCTCAGAG
CATGGAGATGGTGGTGGGGAAGAAGGAGTGGGGTTTGCGTAATCCACTTG
CTCTTTCCGCTGCAGCTGCTGTAGACGCAGGAGGGGGCGGAGGGAGCGAG
GTGGGAAGCGAGGTGTCGCCTTACCCTTTTTACATCCTCCTCGAAACCGC
AGGCAGCAACGAAGAGCACGATGAACAAAAACTGGAAAACCTCCTCACCC
TTGCGTTAGAAGAGGATATAATCGCCGATGGTACCCTCGCCCAAGACGTG
AGCCAAGCCAATGATATTTGGAAGCTTAGGGAGTTGATCCCTGTGGCGAT
AGAAGAAGAAGGAAGAGTACATAAATATGACGTTTCTGTGCCGTTAGATC
GGTTTTATGAGTTGGTGGAGAGGACGAGGGAGGGATTGAGGGAGGAAGGC
TTTGGCGTGGCTACAGCACAATCGGCAGGCGCTCCTGCAGGGGGAAGAAA
GAAGGGAGAGGAGGTTAAAGTGGTGGGGTACGGGCATTTGGGGGATTCGA
ATCTGCACCTGAATGTCTCAGTGCCGCGGAATAAGCCGGACCCCCCCGGT
GTAAGTCGTGTGCTTGGTAGGGTGTTGCCATGGGTTATGAAGCAGGAGGG
AAGCGTAAGTGCAGAGCATGGGCTAGGGCAGTTGAAGAAGGAGTACTTGC
CCTTGACGAAGAGTAGGGCGGCGGTGGCGGCGATGAGGGGGATGAAGAAG
ATGCTGGATCCCAAAGGTATTCTTAATCCAGGGAAGTTTTTCCCGGAGGA
GAAGCCGTGA
back to top
Synonyms
Publications