NO10G02030.1, NO10G02030.1 (mRNA) Nannochloropsis oceanica | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	NO10G02030.1
Unique Name	NO10G02030.1
Type	mRNA
Organism	Nannochloropsis oceanica (N. oceanica IMET1)
Sequence length	3473
Alignment location	chr10:558791..563024 -

Link to JBrowse

Properties

Mutants

Expression

No biomaterial libraries express this feature.

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
chr10	genome	chr10:558791..563024 -

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Gene prediction for N. oceanica IMET1	2017-10-24
Homology annotation for N. oceanica IMET1	2017-10-25
InterPro analysis for N. oceanica IMET1	2017-10-25

Annotated Terms

Homology

[Close]

BLAST of NO10G02030.1 vs.
Match: EWM25463.1 (START-like domain protein [Nannochloropsis gaditana])

HSP 1 Score: 671.0 bits (1730), Expect = 4.000e-189
Identity = 370/650 (56.92%), Postives = 453/650 (69.69%), Query Frame = 0

Query:   42 KAAVAAGTDNKMVFPSRYLDVPALYETQVSADNAMDILDNIKLLNYDDRLLIADDLRKKLEAFLADSPSSNAVKDLRARMQTSPLREELAMLAIRGLECRQAAEDLAGTENWTLVMRSFGFDTFVRPMGGQMLVKVSGEQEGTSVFDQLVVVREAAMYHRWGPFVCKSDLVHSFKHLDLMVTFELNAPLFHRDCLLRGYACDYSEKDMILICGDSTTPAFYPHLNLPAEPNGWMFKRMSITNFRCQVQLRGVNKGKVILAALIDPKTALPQSIVDFCLQRIVGVLLYLLLRTAERLNDAGDKLGGEYLEVVRSDPYYVEHCLPRILWYCQQRGWEYPVAGTAGGDSVLAHLAGATQAVVEEDRLRAIGAAGAAATTVTSASSLRGRQTTAIVEAEDEVQPIEAAGAAAEKKKKKKHFLRSLFRRKKHAHKHNHRLTTEGLVQVMGGASSINASTSGNDSRSPHHHHGLSSAAASPSSMAVASPQGQQHQRRQEQQLGAPTTRREAEGKVLSWTLPAVVVAYFFVRLTVAPLVRSFSGPVGEAIVLAILLQQVLSLLLKKNVLDAACLPSLGGVDPSHAFFAASIVLALGSVVLTTLQTGTVDLKHIEAPGVWERASLSGNTETVHLVNTGLFLLVLVLIVSQPKIRKEVR 692
            K   AA  + + +FPSR  DVPALY+T+++ +NA  IL  I+LL  DDRL+IA+DLRKKLEAF+ + P S   +++R +MQ SPL+E+LA+L+ RG+EC +AAEDLA  ENWTL  R+FGFDTFVRP+G QM VKV GEQEGTS+FDQL+VVREAAMYHRWGPFVC S LVHSFK LDLMVTFELNAPLFHRDCL+RGYACDYSEKDMILICGDS  PA YP L L  EPNGW+FKRMSIT FRCQVQLRGVNKGKVI+AALIDP+TALPQS+++FCLQRIVGVLLYLLLRTA+RLN AGDKLG ++L+V+R DPYY  HCLPRILWYCQQ+GWEYPVAGT GGD +LA +A A  +V E+D+     AA A A     + +  G        A D   P        + KK+ K  LR +FRR+    +    +  + L QV GG       + GN S +     G + + A+P+ +A A     Q   +            + EG V SWTL  V   Y  VR+T+ PLVR FSGPVGEAIVLA LLQQ LSLLLKKNVLDA  L ++G  D S+AFFA S+ L++GS++L   +   VDLK +  P +W+     G    VH +NTGLFL+V+++IV Q    +E R
Sbjct:   47 KMIPAALQNEECIFPSRDFDVPALYKTEITDENASRILAYIQLLTEDDRLMIAEDLRKKLEAFVKEQPLSQVKENIRRQMQESPLQEQLALLSRRGVECLEAAEDLASRENWTLAFRTFGFDTFVRPVGEQMYVKVEGEQEGTSIFDQLLVVREAAMYHRWGPFVCSSALVHSFKQLDLMVTFELNAPLFHRDCLMRGYACDYSEKDMILICGDSVVPADYPSLGLSTEPNGWLFKRMSITRFRCQVQLRGVNKGKVIMAALIDPRTALPQSVINFCLQRIVGVLLYLLLRTAQRLNQAGDKLGADFLQVIRRDPYYFRHCLPRILWYCQQKGWEYPVAGTMGGDMLLAGMAKAMHSVKEDDQ-----AARAMAQQGRQSENGPGSAPPIQESAADRESP------ETQAKKRGKLSLRGIFRRR----RGRDDVQRKQLFQVAGG-------SRGNASSANLMDCGEAPSRAAPTDVAQAEDMSPQQVNQTSAMQTQEIDLHQDEG-VPSWTLIVVTAMYLIVRVTIVPLVRRFSGPVGEAIVLAFLLQQTLSLLLKKNVLDATALTAVGHFDLSYAFFAVSLGLSVGSLLLPRSRRWHVDLKGVHHPPIWDNRIDGG----VHAINTGLFLIVMLIIVCQHMKHRETR 669

The following BLAST results are available for this feature:

BLAST of NO10G02030.1 vs.

BLAST of NO10G02030.1 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 1


Match Name	E-value	Identity	Description
EWM25463.1	4.000e-189	56.92	START-like domain protein [Nannochloropsis gaditan...	[more]

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
NO10G02030	NO10G02030	Nannochloropsis oceanica (N. oceanica IMET1)	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
NO10G02030.1	NO10G02030.1-protein	Nannochloropsis oceanica (N. oceanica IMET1)	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
NO10G02030.1.cds1	NO10G02030.1.cds1	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO10G02030.1.cds2	NO10G02030.1.cds2	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO10G02030.1.cds3	NO10G02030.1.cds3	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO10G02030.1.cds4	NO10G02030.1.cds4	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO10G02030.1.cds5	NO10G02030.1.cds5	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO10G02030.1.cds6	NO10G02030.1.cds6	Nannochloropsis oceanica (N. oceanica IMET1)	CDS

Sequences

The following sequences are available for this feature:

mRNA sequence
protein sequence
mRNA from alignment at chr10:558791..563024-
coding sequence from alignment at chr10:558791..563024-

mRNA sequence

>NO10G02030.1 ID=NO10G02030.1|Name=NO10G02030.1|organism=Nannochloropsis oceanica|type=mRNA|length=3473bp
CGTTAAAGTTGCTGAAGTCGATGCCTGGTTTAGGTGCGTGGGTATAATGG
GGGGAAAGCATGATTAGTGCGGAGGCATGGTTGAACGGTATGATTACATG
TGATGATTATCAGGGAAGAAACATAGAAAAGAACGTGGTATAGCATTACG
TCGTCGTAATTCTCCTTTATCTCCTCTTTAAGCTTCTCTCTCTTTTGAGA
CTTACTGAGGACTTGCACCTTGACCTTAGGGTACTTGGACGAGATTTCCG
CGGCCGTGTCCTTGAGCTTGGACTCCGTGCGGGAAATCAACAACAAGCTC
AACCCCTGCCTGGCCAACTCAAATGCATACGCCTTGCCAATACCGTCCGT
CGCCCCTGTCACTACGGCCCAGGCACCAAACTTTTTCAGATTCTTGCCCG
GGCGAAGGAAGAAGCGGTAGAAGGCCTGGACCACGCCGAACACAAACTTG
AGCACCAACAAAGCCCCCACCCCGGCCAAAACCTGCAGCGCCAAAGGCTG
CCCCTTAAGCGCGTCCACCATTTCCACCGCCACGTTGCCAGGTGTAGGTG
CCATCGGTCCTCGGTTCTTGTGTGATGGTAATGATGGGGCGGGGTGATCG
TGATGGGGGGTGAGGAGGTGGTGTTGTTCGTGCGCGCGGCGCGATTTAAG
GAGTCGTGCGCTGGTAAGTCAGCAAACACAGAATCTTCACCATCTAACGT
ATAAAAAGCCTACGCCTTGAGGCTTCTGGTCGTAACAGGACCGAGCTTTC
TGTGTGCCTTGGAATCGCCCACCCCAACAGATCGTCGGCGACGCTTTTGT
ATGTATACCTAATATTGCCGGAGCTGTCTCAAGCCAAGAAAGCACCCAAG
CACCCACATCTCGTTTCTGCCTAGTCCATGCTCGCCCATGGACTGGAGCG
CAGTCGTTTAAGCACTATGAGATCAATTAGTGTGCCGCCTCTTCTCGCTT
TCTCACGCGGCACCAAAAGACGTACAAAAAATTATATCTACATCAGGCCT
AACTAATAATATGGGTTTGCTTTGTGGAGATCTGTCTAATTCTTGAGTTT
TTGGTCGTAATTCGATTTCTTAGCTACTTGCGCGATCCCCCCTTTTGATC
GGGGGGCAGGTATCGAAGGGGTACTCTTACAAATAGACTACAGGGCGCTC
TCCCCAAGGCCCTACACGAGGGAGAGGGAGAAAATGCAAGCCATGCGAGA
GCGTAAAAAGAAGAAGGCCAGCAAGATCGAATCCCCACAACGCCAGCTCC
AGCCACCTCTGCCGCAGGAACCCGAGCGTATGGCAGCCGGGTCCTCTGAT
GCCCTTAAGGCCGCAGTCGCGGCTGGGACGGACAACAAGATGGTCTTTCC
TTCGCGTTACTTGGACGTGCCCGCTTTGTACGAGACCCAGGTCAGTGCCG
ACAACGCAATGGACATACTTGACAACATCAAGCTTCTGAATTACGACGAT
CGATTGCTCATCGCCGATGACCTACGTAAGAAGCTAGAGGCCTTTTTGGC
TGACTCTCCCTCAAGCAACGCCGTGAAAGATCTACGGGCCCGCATGCAAA
CCAGCCCGTTGAGAGAGGAGCTGGCCATGTTGGCTATCCGGGGGTTAGAA
TGCCGTCAGGCTGCAGAGGATTTGGCAGGAACGGAGAATTGGACTTTGGT
AATGCGTAGTTTTGGATTTGATACCTTTGTCCGGCCTATGGGGGGGCAGA
TGCTGGTGAAAGTATCGGGGGAGCAGGAGGGAACCAGCGTGTTTGATCAG
TTGGTGGTGGTGAGGGAGGCAGCGATGTACCATAGATGGGGACCATTTGT
GTGTAAGAGTGATTTGGTCCACTCGTTCAAGCACCTGGATCTGATGGTGA
CATTCGAGCTCAATGCACCTTTATTTCACCGGGACTGTTTGTTGCGGGGC
TACGCATGTGATTATTCGGAAAAGGACATGATCCTTATCTGCGGCGACAG
CACCACCCCCGCCTTCTACCCTCATCTCAACCTGCCCGCTGAACCGAATG
GCTGGATGTTCAAGCGCATGTCCATCACGAACTTCCGGTGCCAGGTGCAG
CTGCGCGGGGTGAACAAGGGGAAGGTTATCTTGGCAGCTTTGATTGACCC
CAAGACGGCCTTGCCCCAGAGCATTGTGGACTTTTGCTTGCAACGTATTG
TTGGAGTTCTCCTCTATCTCCTCCTCCGGACGGCGGAGCGCCTCAATGAC
GCAGGGGACAAGCTAGGGGGGGAGTACCTGGAGGTAGTGCGGTCCGATCC
GTACTACGTAGAGCATTGTCTGCCCCGTATCCTTTGGTATTGCCAACAAC
GGGGATGGGAGTACCCCGTGGCGGGGACGGCGGGTGGAGACTCAGTGCTC
GCCCACCTAGCCGGAGCTACGCAGGCTGTAGTGGAGGAAGACCGGCTACG
TGCGATAGGAGCAGCAGGAGCAGCAGCAACAACAGTAACATCGGCGTCGT
CTTTGAGAGGAAGACAAACAACCGCCATCGTAGAGGCGGAGGACGAGGTA
CAACCGATAGAAGCAGCAGGGGCAGCAGCAGAGAAGAAGAAGAAGAAGAA
GCATTTCCTCCGCAGCCTTTTCCGTCGCAAGAAGCATGCCCACAAGCACA
ACCACAGACTGACCACCGAGGGCCTTGTGCAAGTCATGGGGGGTGCTTCC
AGTATCAACGCCAGCACTAGTGGCAACGACAGTCGGTCTCCGCACCACCA
CCACGGCCTCAGTAGCGCGGCTGCCTCCCCCTCTTCCATGGCGGTGGCTA
GCCCGCAAGGGCAGCAGCACCAACGGCGACAGGAGCAGCAGCTGGGAGCT
CCAACGACAAGAAGGGAGGCAGAAGGCAAGGTGCTGTCATGGACGCTGCC
GGCAGTGGTTGTGGCATACTTCTTTGTTCGCTTGACTGTTGCCCCTCTCG
TCCGGAGCTTCAGTGGGCCGGTGGGCGAGGCAATCGTGCTGGCGATTTTG
TTGCAGCAAGTCCTGTCATTGCTCTTGAAAAAGAATGTGCTTGATGCAGC
TTGCTTGCCGTCACTTGGAGGTGTTGATCCCTCACATGCGTTTTTTGCCG
CCTCAATAGTCCTGGCACTGGGGAGTGTGGTGCTGACGACCTTGCAGACG
GGCACCGTTGACCTCAAGCACATCGAAGCTCCTGGGGTCTGGGAACGCGC
CTCTCTCTCTGGTAATACTGAGACGGTTCATTTGGTGAACACGGGTTTGT
TCCTGTTGGTACTTGTTTTGATCGTGTCCCAACCCAAGATCCGGAAGGAG
GTCCGACGGCTCTCTTCTGCCACGGTGACGTCGACGAAGACGAAGTAGGA
GATTAAGTGATGTGAGAGGGAGAGGAAGCGGGAAAAAATGATTTTTCGCT
GAGTGTCATGCCTGAAGAATGTGCATGTGTTTGAGAGGGGGACACAGTAG
CTATGTGTAAAAAAAAATGGTGTGCAGTAACCTGGCAGGATTGTGACATC
GTCAACGAAGAAAATCTCCGGCA

protein sequence of NO10G02030.1

>NO10G02030.1-protein ID=NO10G02030.1-protein|Name=NO10G02030.1|organism=Nannochloropsis oceanica|type=polypeptide|length=705bp
MQAMRERKKKKASKIESPQRQLQPPLPQEPERMAAGSSDALKAAVAAGTD
NKMVFPSRYLDVPALYETQVSADNAMDILDNIKLLNYDDRLLIADDLRKK
LEAFLADSPSSNAVKDLRARMQTSPLREELAMLAIRGLECRQAAEDLAGT
ENWTLVMRSFGFDTFVRPMGGQMLVKVSGEQEGTSVFDQLVVVREAAMYH
RWGPFVCKSDLVHSFKHLDLMVTFELNAPLFHRDCLLRGYACDYSEKDMI
LICGDSTTPAFYPHLNLPAEPNGWMFKRMSITNFRCQVQLRGVNKGKVIL
AALIDPKTALPQSIVDFCLQRIVGVLLYLLLRTAERLNDAGDKLGGEYLE
VVRSDPYYVEHCLPRILWYCQQRGWEYPVAGTAGGDSVLAHLAGATQAVV
EEDRLRAIGAAGAAATTVTSASSLRGRQTTAIVEAEDEVQPIEAAGAAAE
KKKKKKHFLRSLFRRKKHAHKHNHRLTTEGLVQVMGGASSINASTSGNDS
RSPHHHHGLSSAAASPSSMAVASPQGQQHQRRQEQQLGAPTTRREAEGKV
LSWTLPAVVVAYFFVRLTVAPLVRSFSGPVGEAIVLAILLQQVLSLLLKK
NVLDAACLPSLGGVDPSHAFFAASIVLALGSVVLTTLQTGTVDLKHIEAP
GVWERASLSGNTETVHLVNTGLFLLVLVLIVSQPKIRKEVRRLSSATVTS
TKTK*

mRNA from alignment at chr10:558791..563024-

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>NO10G02030.1 ID=NO10G02030.1|Name=NO10G02030.1|organism=Nannochloropsis oceanica|type=mRNA|length=4234bp|location=Sequence derived from alignment at chr10:558791..563024- (Nannochloropsis oceanica)
CGTTAAAGTTGCTGAAGTCGATGCCTGGTTTAGGTGCGTGGGTATAATGG
GGGGAAAGCATGATTAGTGCGGAGGCATGGTTGAACGGTATGATTACATG
TGATGATTATCAGGGAAGAAACATAGAAAAGAACGTGGTATAGCATTACG
TCGTCGTAATTCTCCTTTATCTCCTCTTTAAGCTTCTCTCTCTTTTGAGA
CTTACTGAGGACTTGCACCTTGACCTTAGGGTACTTGGACGAGATTTCCG
CGGCCGTGTCCTTGAGCTTGGACTCCGTGCGGGAAATCAACAACAAGCTC
AACCCCTGCCTGGCCAACTCAAATGCATACGCCTTGCCAATACCGTCCGT
CGCCCCTGTCACTACGGCCCAGGCACCAAACTTTTTCAGATTCTTGCCCG
GGCGAAGGAAGAAGCGGTAGAAGGCCTGGACCACGCCGAACACAAACTTG
AGCACCAACAAAGCCCCCACCCCGGCCAAAACCTGCAGCGCCAAAGGCTG
CCCCTTAAGCGCGTCCACCATTTCCACCGCCACGTTGCCAGGTGTAGGTG
CCATCGGTCCTCGGTTCTTGTGTGATGGTAATGATGGGGCGGGGTGATCG
TGATGGGGGGTGAGGAGGTGGTGTTGTTCGTGCGCGCGGCGCGATTTAAG
GAGTCGTGCGCTGGTAAGTCAGCAAACACAGAATCTTCACCATCTAACGT
ATAAAAAGCCTACGCCTTGAGGCTTCTGGTCGTAACAGGACCGAGCTTTC
TGTGTGCCTTGGAATCGCCCACCCCAACAGATCGTCGGCGACGCTTTTGT
ATGTATACCTAATATTGCCGGAGCTGTCTCAAGCCAAGAAAGCACCCAAG
CACCCACATCTCGTTTCTGCCTAGTCCATGCTCGCCCATGGACTGGAGCG
CAGTCGTTTAAGCACTATGAGATCAATTAGTGTGCCGCCTCTTCTCGCTT
TCTCACGCGGCACCAAAAGACGTACAAAAAATTATATCTACATCAGGCCT
AACTAATAATATGGGTTTGCTTTGTGGAGATCTGTCTAATTCTTGAGTTT
TTGGTCGTAATTCGATTTCTTAGCTACTTGCGCGATCCCCCCTTTTGATC
GGGGGGCAGGTATCGAAGGGGTACTCTTACAAATAGACTACAGGGCGCTC
TCCCCAAGGCCCTACACGAGGGAGAGGGAGAAAATGCAAGCCATGCGAGA
GCGTAAAAAGAAGAAGGCCAGCAAGATCGAATCCCCACAACGCCAGCTCC
AGCCACCTCTGCCGCAGGAACCCGAGCGTATGGCAGCCGGGTCCTCTGAT
GCCCTTAAGGCCGCAGTCGCGGCTGGGACGGACAACAAGATGGTCTTTCC
TTCGCGTTACTTGGACGTGCCCGCTTTGTACGAGACCCAGGTAAGAATTT
GGGCCGCTGCGACCATTCACAAGCACTTAAATCCCATCCGAATCCCACCG
TCATGGTCTCTGGGGCCTCTGTTCCCCTGGCCAATGCTCCTCACTGCCTT
TCCCCCTTTGTGATCATATCACTGACCGACTGCCGCCCCAAATGTTCACA
GGTCAGTGCCGACAACGCAATGGACATACTTGACAACATCAAGCTTCTGA
ATTACGACGATCGATTGCTCATCGCCGATGACCTACGTAAGAAGCTAGAG
GCCTTTTTGGCTGACTCTCCCTCAAGCAACGCCGTGAAAGATCTACGGGC
CCGCATGCAAACCAGCCCGTTGAGAGAGGAGCTGGCCATGTTGGCTATCC
GGGGGTTAGAATGCCGTCAGGCTGCAGAGGATTTGGCAGGAACGGAGAAT
TGGACTTTGGTAATGCGTAGTTTTGGATTTGATACCTTTGTCCGGCCTAT
GGGGGGGCAGATGCTGGTGAAAGTATCGGGGGAGCAGGAGGGAACCAGCG
TGTTTGATCAGTTGGTGGTGGTGAGGGAGGCAGCGATGTACCATAGGTAC
GTAATTGCTGTTGTTTCGATTTTCATGGGGGGTATGTCAGCTATTTTGTC
TGCATGCTAGCATTCACACACTTTACCTTGATCCACTTAATTCTCTCACT
TAATTTAGATGGGGACCATTTGTGTGTAAGAGTGATTTGGTCCACTCGTT
CAAGCACCTGGATCTGATGGTGACATTCGAGCTCAATGCACCTTTATTTC
ACCGGTATGTTGTCGTTTGCTTGGGGGGGGGGGGGGGGGGAGGAGGAGAT
AGGGTGGGAGGGATGGAGAGGCCACTAGACATGTGGCTCTTGTATTGAAC
TCACCTTGCTCGACTCACTCATCTTGAAATGTCAGGGACTGTTTGTTGCG
GGGCTACGCATGTGATTATTCGGAAAAGGACATGATCCTTATCTGCGGCG
ACAGCACCACCCCCGCCTTCTACCCTCATCTCAACCTGCCCGCTGAACCG
AATGGCTGGATGTTCAAGCGCATGTCCATCACGAACTTCCGGTGCCAGGT
GCAGCTGCGCGGGGTGAACAAGGGGAAGGTTATCTTGGCAGCTTTGATTG
ACCCCAAGACGGCCTTGCCCCAGAGCATTGTGGACTTTTGCTTGCAACGT
ATTGTTGGGTACGCGAGTCGCTGTTGCTCATCCCTCTCTGTCATCCCTCC
TCATCCCTCCTCCTCTTCCTGCTTTTTCCGTTTCTATCCCTCATACCTCT
TCTCTCCCTGTAAATTGCCTGCATTTGGCCATATATTATTCACCACTGAC
TTTTGTAGTCTCCTTGCGCGTACCTTCACTCACATTCACAGAGTTCTCCT
CTATCTCCTCCTCCGGACGGCGGAGCGCCTCAATGACGCAGGGGACAAGC
TAGGGGGGGAGTACCTGGAGGTAGTGCGGTCCGATCCGTACTACGTAGAG
CATTGTCTGCCCCGTATCCTTTGGTATTGCCAACAACGGGTGCGTCAGAA
ATAACTTTTTAATAATCTGCGAGCAATCTTGTTTATTTGTGTTTTTTTGT
CCCCCCCCGGTTTTGTCCATTTCTACCCATGCCTCTTCTTTCTCCTTCCC
GAACACACAAATGCGCGACCGAAAGTATATCCAGCCGATTCATTTCTCTC
TTTGCATGAACAGGGATGGGAGTACCCCGTGGCGGGGACGGCGGGTGGAG
ACTCAGTGCTCGCCCACCTAGCCGGAGCTACGCAGGCTGTAGTGGAGGAA
GACCGGCTACGTGCGATAGGAGCAGCAGGAGCAGCAGCAACAACAGTAAC
ATCGGCGTCGTCTTTGAGAGGAAGACAAACAACCGCCATCGTAGAGGCGG
AGGACGAGGTACAACCGATAGAAGCAGCAGGGGCAGCAGCAGAGAAGAAG
AAGAAGAAGAAGCATTTCCTCCGCAGCCTTTTCCGTCGCAAGAAGCATGC
CCACAAGCACAACCACAGACTGACCACCGAGGGCCTTGTGCAAGTCATGG
GGGGTGCTTCCAGTATCAACGCCAGCACTAGTGGCAACGACAGTCGGTCT
CCGCACCACCACCACGGCCTCAGTAGCGCGGCTGCCTCCCCCTCTTCCAT
GGCGGTGGCTAGCCCGCAAGGGCAGCAGCACCAACGGCGACAGGAGCAGC
AGCTGGGAGCTCCAACGACAAGAAGGGAGGCAGAAGGCAAGGTGCTGTCA
TGGACGCTGCCGGCAGTGGTTGTGGCATACTTCTTTGTTCGCTTGACTGT
TGCCCCTCTCGTCCGGAGCTTCAGTGGGCCGGTGGGCGAGGCAATCGTGC
TGGCGATTTTGTTGCAGCAAGTCCTGTCATTGCTCTTGAAAAAGAATGTG
CTTGATGCAGCTTGCTTGCCGTCACTTGGAGGTGTTGATCCCTCACATGC
GTTTTTTGCCGCCTCAATAGTCCTGGCACTGGGGAGTGTGGTGCTGACGA
CCTTGCAGACGGGCACCGTTGACCTCAAGCACATCGAAGCTCCTGGGGTC
TGGGAACGCGCCTCTCTCTCTGGTAATACTGAGACGGTTCATTTGGTGAA
CACGGGTTTGTTCCTGTTGGTACTTGTTTTGATCGTGTCCCAACCCAAGA
TCCGGAAGGAGGTCCGACGGCTCTCTTCTGCCACGGTGACGTCGACGAAG
ACGAAGTAGGAGATTAAGTGATGTGAGAGGGAGAGGAAGCGGGAAAAAAT
GATTTTTCGCTGAGTGTCATGCCTGAAGAATGTGCATGTGTTTGAGAGGG
GGACACAGTAGCTATGTGTAAAAAAAAATGGTGTGCAGTAACCTGGCAGG
ATTGTGACATCGTCAACGAAGAAAATCTCCGGCA

Coding sequence (CDS) from alignment at chr10:558791..563024-

>NO10G02030.1 ID=NO10G02030.1|Name=NO10G02030.1|organism=Nannochloropsis oceanica|type=CDS|length=2115bp|location=Sequence derived from alignment at chr10:558791..563024- (Nannochloropsis oceanica)
ATGCAAGCCATGCGAGAGCGTAAAAAGAAGAAGGCCAGCAAGATCGAATC
CCCACAACGCCAGCTCCAGCCACCTCTGCCGCAGGAACCCGAGCGTATGG
CAGCCGGGTCCTCTGATGCCCTTAAGGCCGCAGTCGCGGCTGGGACGGAC
AACAAGATGGTCTTTCCTTCGCGTTACTTGGACGTGCCCGCTTTGTACGA
GACCCAGGTCAGTGCCGACAACGCAATGGACATACTTGACAACATCAAGC
TTCTGAATTACGACGATCGATTGCTCATCGCCGATGACCTACGTAAGAAG
CTAGAGGCCTTTTTGGCTGACTCTCCCTCAAGCAACGCCGTGAAAGATCT
ACGGGCCCGCATGCAAACCAGCCCGTTGAGAGAGGAGCTGGCCATGTTGG
CTATCCGGGGGTTAGAATGCCGTCAGGCTGCAGAGGATTTGGCAGGAACG
GAGAATTGGACTTTGGTAATGCGTAGTTTTGGATTTGATACCTTTGTCCG
GCCTATGGGGGGGCAGATGCTGGTGAAAGTATCGGGGGAGCAGGAGGGAA
CCAGCGTGTTTGATCAGTTGGTGGTGGTGAGGGAGGCAGCGATGTACCAT
AGATGGGGACCATTTGTGTGTAAGAGTGATTTGGTCCACTCGTTCAAGCA
CCTGGATCTGATGGTGACATTCGAGCTCAATGCACCTTTATTTCACCGGG
ACTGTTTGTTGCGGGGCTACGCATGTGATTATTCGGAAAAGGACATGATC
CTTATCTGCGGCGACAGCACCACCCCCGCCTTCTACCCTCATCTCAACCT
GCCCGCTGAACCGAATGGCTGGATGTTCAAGCGCATGTCCATCACGAACT
TCCGGTGCCAGGTGCAGCTGCGCGGGGTGAACAAGGGGAAGGTTATCTTG
GCAGCTTTGATTGACCCCAAGACGGCCTTGCCCCAGAGCATTGTGGACTT
TTGCTTGCAACGTATTGTTGGAGTTCTCCTCTATCTCCTCCTCCGGACGG
CGGAGCGCCTCAATGACGCAGGGGACAAGCTAGGGGGGGAGTACCTGGAG
GTAGTGCGGTCCGATCCGTACTACGTAGAGCATTGTCTGCCCCGTATCCT
TTGGTATTGCCAACAACGGGGATGGGAGTACCCCGTGGCGGGGACGGCGG
GTGGAGACTCAGTGCTCGCCCACCTAGCCGGAGCTACGCAGGCTGTAGTG
GAGGAAGACCGGCTACGTGCGATAGGAGCAGCAGGAGCAGCAGCAACAAC
AGTAACATCGGCGTCGTCTTTGAGAGGAAGACAAACAACCGCCATCGTAG
AGGCGGAGGACGAGGTACAACCGATAGAAGCAGCAGGGGCAGCAGCAGAG
AAGAAGAAGAAGAAGAAGCATTTCCTCCGCAGCCTTTTCCGTCGCAAGAA
GCATGCCCACAAGCACAACCACAGACTGACCACCGAGGGCCTTGTGCAAG
TCATGGGGGGTGCTTCCAGTATCAACGCCAGCACTAGTGGCAACGACAGT
CGGTCTCCGCACCACCACCACGGCCTCAGTAGCGCGGCTGCCTCCCCCTC
TTCCATGGCGGTGGCTAGCCCGCAAGGGCAGCAGCACCAACGGCGACAGG
AGCAGCAGCTGGGAGCTCCAACGACAAGAAGGGAGGCAGAAGGCAAGGTG
CTGTCATGGACGCTGCCGGCAGTGGTTGTGGCATACTTCTTTGTTCGCTT
GACTGTTGCCCCTCTCGTCCGGAGCTTCAGTGGGCCGGTGGGCGAGGCAA
TCGTGCTGGCGATTTTGTTGCAGCAAGTCCTGTCATTGCTCTTGAAAAAG
AATGTGCTTGATGCAGCTTGCTTGCCGTCACTTGGAGGTGTTGATCCCTC
ACATGCGTTTTTTGCCGCCTCAATAGTCCTGGCACTGGGGAGTGTGGTGC
TGACGACCTTGCAGACGGGCACCGTTGACCTCAAGCACATCGAAGCTCCT
GGGGTCTGGGAACGCGCCTCTCTCTCTGGTAATACTGAGACGGTTCATTT
GGTGAACACGGGTTTGTTCCTGTTGGTACTTGTTTTGATCGTGTCCCAAC
CCAAGATCCGGAAGGAGGTCCGACGGCTCTCTTCTGCCACGGTGACGTCG
ACGAAGACGAAGTAG

Synonyms

Publications