NO10G00380.1, NO10G00380.1 (mRNA) Nannochloropsis oceanica

Overview
NameNO10G00380.1
Unique NameNO10G00380.1
TypemRNA
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length570
Alignment locationchr10:134911..135606 -

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Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr10genomechr10:134911..135606 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. oceanica IMET12017-10-24
Homology annotation for N. oceanica IMET12017-10-25
InterPro analysis for N. oceanica IMET12017-10-25
Annotated Terms
Homology
The following BLAST results are available for this feature:
BLAST of NO10G00380.1 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
NO10G00380NO10G00380Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
NO10G00380.1NO10G00380.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
NO10G00380.1.cds1NO10G00380.1.cds1Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO10G00380.1.cds2NO10G00380.1.cds2Nannochloropsis oceanica (N. oceanica IMET1)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>NO10G00380.1 ID=NO10G00380.1|Name=NO10G00380.1|organism=Nannochloropsis oceanica|type=mRNA|length=570bp
ATGACACCAGGCAACACCCGCAGCAGTAGCAGAAGCAGCAGGAGGATAGC
AGCCAGAGGAGGATCAGGAGGGGAAAAAGTAACAGGAAGAAAGCAGCATG
GCAGCGCGTCATCTGCCCTTGACAGGGTCGCGCACTTTGCTCTTCCGTCC
GCAGCGAGCCTGACTCTCCTCGACTCTCCTACCAGCCGCACAGTTTCTCA
CTGCTCTATCTCCCAGCCCTCTCTTTGTGAGGGCTTTAAGGAAGGGATGG
AGAGAGCGAAGGAGAAAATGGTGATGACGGCGGAGAAGGACAGTATAAAT
GAGCATGTAGGGGTCAGTGATCAAAAGATGCGGCCTACTATCTCTCCCTT
AACCATTCGAAAGCCTCCACCATTTCTCCGACAGAGAGGGGGAAGCTTTG
ATGCCATGCATGACCGTTTGTCGCCTCGCTCCTTCCCTTCTTTTCTCCTC
CGCAGTCCTGATGACGACGGTCTGCTCAGGGAGGAGCACGGCGGCCGTCA
TCAGAAGCAGCCTTACCAGCAGCCCTGGTCGCACAATTGCTCGTTAGCTG
CCGACTCTGAAGAGGAATAG
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protein sequence of NO10G00380.1

>NO10G00380.1-protein ID=NO10G00380.1-protein|Name=NO10G00380.1|organism=Nannochloropsis oceanica|type=polypeptide|length=190bp
MTPGNTRSSSRSSRRIAARGGSGGEKVTGRKQHGSASSALDRVAHFALPS
AASLTLLDSPTSRTVSHCSISQPSLCEGFKEGMERAKEKMVMTAEKDSIN
EHVGVSDQKMRPTISPLTIRKPPPFLRQRGGSFDAMHDRLSPRSFPSFLL
RSPDDDGLLREEHGGRHQKQPYQQPWSHNCSLAADSEEE*
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mRNA from alignment at chr10:134911..135606-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>NO10G00380.1 ID=NO10G00380.1|Name=NO10G00380.1|organism=Nannochloropsis oceanica|type=mRNA|length=696bp|location=Sequence derived from alignment at chr10:134911..135606- (Nannochloropsis oceanica)
ATGACACCAGGCAACACCCGCAGCAGTAGCAGAAGCAGCAGGAGGATAGC
AGCCAGAGGAGGATCAGGAGGGGAAAAAGTAACAGGAAGAAAGCAGCATG
GCAGCGCGTCATCTGCCCTTGACAGGGTCGCGCACTTTGCTCTTCCGTCC
GCAGCGAGCCTGACTCTCCTCGACTCTCCTACCAGCCGCACAGTTTCTCA
CTGCTCTATCTCCCAGCCCTCTCTTTGTGAGGGCTTTAAGGAAGGGATGG
AGAGAGCGAAGGAGAAAATGGTGATGACGGCGGAGAAGGACAGTATAAAT
GAGCATGTAGGGGTCAGTGATCAAAAGATGCGGCCTACTATCTCTCCCTT
AACCATTCGAAAGCCTCCACCATTTCTCCGACAGAGAGGTAACAGTAGGG
AGTTGGGGGAGGGAGAGGAAGGAGAATGGAACATTTCGGCGTCGTTTCTA
CTTATTTCAGAGTCGTTTCTGCTTATCTCCTCATTTCCATCCTCTCACAC
CATTCTTTTCACAGGGGGAAGCTTTGATGCCATGCATGACCGTTTGTCGC
CTCGCTCCTTCCCTTCTTTTCTCCTCCGCAGTCCTGATGACGACGGTCTG
CTCAGGGAGGAGCACGGCGGCCGTCATCAGAAGCAGCCTTACCAGCAGCC
CTGGTCGCACAATTGCTCGTTAGCTGCCGACTCTGAAGAGGAATAG
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Coding sequence (CDS) from alignment at chr10:134911..135606-

>NO10G00380.1 ID=NO10G00380.1|Name=NO10G00380.1|organism=Nannochloropsis oceanica|type=CDS|length=570bp|location=Sequence derived from alignment at chr10:134911..135606- (Nannochloropsis oceanica)
ATGACACCAGGCAACACCCGCAGCAGTAGCAGAAGCAGCAGGAGGATAGC
AGCCAGAGGAGGATCAGGAGGGGAAAAAGTAACAGGAAGAAAGCAGCATG
GCAGCGCGTCATCTGCCCTTGACAGGGTCGCGCACTTTGCTCTTCCGTCC
GCAGCGAGCCTGACTCTCCTCGACTCTCCTACCAGCCGCACAGTTTCTCA
CTGCTCTATCTCCCAGCCCTCTCTTTGTGAGGGCTTTAAGGAAGGGATGG
AGAGAGCGAAGGAGAAAATGGTGATGACGGCGGAGAAGGACAGTATAAAT
GAGCATGTAGGGGTCAGTGATCAAAAGATGCGGCCTACTATCTCTCCCTT
AACCATTCGAAAGCCTCCACCATTTCTCCGACAGAGAGGGGGAAGCTTTG
ATGCCATGCATGACCGTTTGTCGCCTCGCTCCTTCCCTTCTTTTCTCCTC
CGCAGTCCTGATGACGACGGTCTGCTCAGGGAGGAGCACGGCGGCCGTCA
TCAGAAGCAGCCTTACCAGCAGCCCTGGTCGCACAATTGCTCGTTAGCTG
CCGACTCTGAAGAGGAATAG
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Synonyms
Publications