NO10G00270.2, NO10G00270.2 (mRNA) Nannochloropsis oceanica

Overview
NameNO10G00270.2
Unique NameNO10G00270.2
TypemRNA
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length3930
Alignment locationchr10:92609..99750 -

Link to JBrowse

Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr10genomechr10:92609..99750 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. oceanica IMET12017-10-24
Homology annotation for N. oceanica IMET12017-10-25
InterPro analysis for N. oceanica IMET12017-10-25
Annotated Terms
Homology
BLAST of NO10G00270.2 vs.
Match: CBJ26225.1 (similar to Conserved oligomeric Golgi complex subunit 7 (COG complex subunit 7) (Component of oligomeric golgi complex 7) [Ectocarpus siliculosus])

HSP 1 Score: 161.0 bits (406), Expect = 1.400e-35
Identity = 131/427 (30.68%), Postives = 206/427 (48.24%), Query Frame = 0
Query:    2 RLQLLAQDLNGELEKGLMELTASFPRALAELDRLDTAGRELKNELGHVLGQVTKAQASRSMKEGEGGEEGEDSDPVEVLARLHQVKTNMTRCRTTLLEAARWQQAVRDVNNRMAAGELAQVADKLGQMRKSLEILKDMPEAEERAQALFNLEKEMEVLLAPRAAAAIQKETLTELQEYAQLYLKLARSDALHDDYAKARPAQLHRSWYALG---------PDEAFSTWLPATFYKQVLDFLTDERRRCSEAFGASAAPTVLAHLTREIFLPLQGSFQQRL--------LRLLGPGGATSLKAKGERGGEEEGQEEKE-------EGGGFPAVVDLFGS-TTQFLS-ALLPITAT--AIHTDVIVTVLQPFVVFAERYENLEGAALE--ISIQKKSKRVASLLNQKEGKEGGRGGGKAVSSRMEELLD 399
            +LQ ++  +N  LEK ++E+  S PR + E+DR++ A + L  EL ++ GQ+       S+  G           VE LARL  VKTNM  C  TL EAA W   VR+VN      +L  VA +L  M  S+++LKDMPEAE+RA  L +L++ +E LL P+    ++K+ +  L EYA +Y +L R+D    +Y   + A  H+ W+A                + WLP +F + +   L DER++ S+ FG   +P VL  L    F PL GSFQ+ L        + LL       L+   +      G  E++          GF  + D FG+    FLS  L P+  T   + + V      P + F  R E +   + +  + +Q+ + R   L    +G++  R   +A+S+ ++ + D
Sbjct:   70 KLQAVSATINAGLEKSMVEIMVSVPRVVTEVDRVEAAIKTLNGELINLSGQL------ESIDHGANAH-------VETLARLDLVKTNMGDCLHTLTEAASWNALVREVNASFGQDDLKGVAQRLEAMAGSMDVLKDMPEAEDRAATLRDLQERLETLLKPKLLEIVKKDRMGPLMEYAAMYRQLGRTDVFRAEYCSTKAAAAHKRWFASATSSGSEGGTTSSGLANWLP-SFLEYLQGSLMDERKKTSDLFGGDTSPAVLCQLVVVAFQPLLGSFQKHLEAAPWTEAVALL----TEVLRFVNQAVDLLRGASERDLLAVLLSSTSGFRLIQDSFGAHERSFLSLELQPLLETLGGVTSAVERGGTAPAMTFTRRMEEISDVSTKGFVVVQQSAGRCTELTGGYQGRDLLREAAEALSAFLKAVRD 478          
The following BLAST results are available for this feature:
BLAST of NO10G00270.2 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 1
Match NameE-valueIdentityDescription
CBJ26225.11.400e-3530.68similar to Conserved oligomeric Golgi complex subu... [more]
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
NO10G00270NO10G00270Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
NO10G00270.2NO10G00270.2-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
NO10G00270.2.cds1NO10G00270.2.cds1Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO10G00270.2.cds2NO10G00270.2.cds2Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO10G00270.2.cds3NO10G00270.2.cds3Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO10G00270.2.cds4NO10G00270.2.cds4Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO10G00270.2.cds5NO10G00270.2.cds5Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO10G00270.2.cds6NO10G00270.2.cds6Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO10G00270.2.cds7NO10G00270.2.cds7Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO10G00270.2.cds8NO10G00270.2.cds8Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO10G00270.2.cds9NO10G00270.2.cds9Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO10G00270.2.cds10NO10G00270.2.cds10Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO10G00270.2.cds11NO10G00270.2.cds11Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO10G00270.2.cds12NO10G00270.2.cds12Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO10G00270.2.cds13NO10G00270.2.cds13Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO10G00270.2.cds14NO10G00270.2.cds14Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO10G00270.2.cds15NO10G00270.2.cds15Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO10G00270.2.cds16NO10G00270.2.cds16Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO10G00270.2.cds17NO10G00270.2.cds17Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO10G00270.2.cds18NO10G00270.2.cds18Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO10G00270.2.cds19NO10G00270.2.cds19Nannochloropsis oceanica (N. oceanica IMET1)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>NO10G00270.2 ID=NO10G00270.2|Name=NO10G00270.2|organism=Nannochloropsis oceanica|type=mRNA|length=3930bp
GGGAGGGGGGAAAAGGGTCTGCCGCTGGAAGAGAATGATTGCAAAACGGG
CTACCAGGCACCGATCATACGCTAGACAGGCGTACACGTGCTGGTGTACG
TTCGAATAGACTCCCTGGAAGTGTGATGTGGGTGGGTGTGGGTATAGGTG
TAGGCGTAGAGAAGGAGGGGACATGAGGAGGGAGAGGATCTAGATGATAG
CCTAACGGGTCCGCGACGCCGCGACGCCGTCCGCGAATCGACTGACGATT
GGCAGCTCGCTGGGCGGTTCACGTGCCGAGGCTGCTGGCTTGCCCGTAAA
CGGTGGTGGTGCTGCTTTTGAAGGGCTTGACTCAAAGTGTGTCTGTCCGC
AGCCATCCCATTTCTCCTCTCGTCTCCTGGTGGACTCGCTGTTTGAACCT
CGCTTTTTCTCACGCCCCTCTCTCAACACTTCACAAAAGCCTCATTCTCA
CCACAAACCCACACGCAAAAACCAGGCACATTTACCAAGGTACCGTCGGA
CCCTCCCGACCAGCCCCTACGTCCTTGTCTCCTTGGCCTTTCCCTCCTTA
GTCGCATCAAGCCACACACACACACCCCACGGCACTCATGGACCTCGCCG
CGTTCTCCCAGCCGACCTTTGACGCTCAGGAATGGGCAGAAGGCGTGCTG
GCCCCGGAGAAGCGCGAAGGTACTCTAATAGATAAGGAAAAACTTCTTGG
AAGGATGGGAGAGATTGTTTCATTTCGCAAGTGGCTCCGTTGAACCCCCA
CTCCCCTTCCTCCCTCCCTCTATCCCTCCCTTTTCTCACCTTTATAGGCG
AGACGCTCGAAGCCTTTCTCGCCAGCGCCTCCATGCGCCTGCAGCTATTG
GCCCAAGACTTGAACGGCGAGTTGGAAAAGGGGTTGATGGAATTGACGGC
ATCTTTCCCCCGGGCCTTGGCAGAACTTGACCGGCTGGACACGGCGGGGA
GGGAGCTCAAGAATGAACTGGGGCATGTGCTGGGGCAGGTGACGAAGGCA
CAGGCGTCAAGAAGCATGAAGGAGGGAGAGGGAGGGGAGGAGGGCGAGGA
CAGTGACCCTGTGGAAGTCCTCGCGCGCTTGCACCAGGTAAAAACCAACA
TGACTCGGTGCCGCACCACCCTGCTAGAGGCCGCCCGATGGCAGCAAGCG
GTGCGGGACGTCAACAACCGCATGGCGGCGGGGGAGCTGGCGCAGGTGGC
TGACAAGTTGGGCCAAATGCGGAAGTCACTGGAGATCCTCAAGGACATGC
CCGAGGCGGAAGAACGCGCCCAGGCTCTGTTTAATCTTGAGAAAGAGATG
GAGGTGCTGCTCGCCCCCAGAGCGGCCGCGGCCATCCAGAAGGAGACCTT
GACAGAATTGCAGGAGTACGCCCAGCTCTATCTCAAGCTCGCTCGGTCGG
ACGCTCTCCACGACGACTACGCGAAGGCCCGCCCTGCGCAGCTCCATCGA
AGCTGGTATGCTCTCGGCCCCGACGAAGCGTTTTCCACCTGGCTCCCTGC
CACCTTCTACAAGCAGGTTTTGGATTTTCTGACTGATGAGCGACGACGGT
GCAGTGAGGCTTTCGGGGCCTCGGCCGCTCCCACCGTCCTCGCCCACCTC
ACCCGCGAGATCTTCCTCCCTCTCCAAGGGTCCTTCCAACAGCGCCTCCT
CCGCCTCCTGGGACCCGGTGGAGCTACGTCACTCAAGGCCAAGGGAGAGA
GAGGGGGGGAGGAAGAGGGGCAGGAAGAGAAGGAGGAAGGGGGGGGCTTT
CCGGCGGTGGTTGATTTGTTTGGGAGCACGACTCAGTTCCTCTCGGCCCT
CCTCCCCATCACCGCTACGGCTATCCACACCGACGTCATCGTCACCGTCC
TCCAGCCCTTCGTCGTCTTCGCCGAGCGATATGAGAATTTAGAAGGCGCC
GCTCTCGAGATTAGCATCCAAAAAAAGAGCAAGAGAGTGGCCAGCCTGCT
AAACCAGAAGGAAGGGAAGGAGGGGGGGAGGGGGGGCGGGAAAGCGGTGT
CGTCGCGTATGGAGGAGCTGCTGGATATGTGCAACAGCGCCTACCCCGTG
CTCGAGGCCCTGGTCGAGCGCTCTCTCGCCTTCTCCGCCGGCTTCCACGC
ACGGGAACTGCTGCGCCTCACCGAGAAACATCTCTCTGCTGATTTGACGA
GCACGTTTCCCCCCGCCCTCCATCTGCTCCGCACTCTCGCTCTTTCCCCT
TCTTCCACTTCCTCCTCCCCCTCCTCCCCCTTGCCAACGTCCCGAGGACA
TTTTTTCGACAACGATCATCTGCAGGCCGCCCTCCGTCTCCTCCAGGCCC
TCGGTCGCAACCTTCTCGCCTTGCGTCGGCGGGAAAAGGAAATGGGCCGA
CTCCTCGGCTCAACCGTGTGGACCCAGCTCTTCAGCGACGACGCCGCGGA
CAGCCACCTCCCCTCCCCCTCCTCCGTCCAGGTTGCCTGGGTGCGGGCCG
TCCTCCTGTCCTCCCCCCCTGCCTCCGTCCCTTCCTCCCCCCCTGCCTCG
ACCTCGGGTGCACTGGAGCTCAAGGCCTTCCTGCGAGTGTTTGAGACGCA
ACAGCCCATGCCCGGCGACCTCCTCAAGGGCCCCTCGCGCACGTCTGCCT
CTTTGTCCTGGGAAGCGCTCTCCCTCCTCCACACCCTCTGCCTCTCTCTG
GTTCGACATCGGTTGCAGGCTCTGACCACGCTGGATATGTGGGGAGAGGA
AGGCGGGGAGAAGGAGACAGACGCTCTGGACCCGGGCTCCGCCGCCTTTT
ACAGTAATTTGCCCCAGCCCTACGTCACGCAGGTAAGTTCCTTCCTTCCT
TCCCTCCCGGCGCTTCCCAAGGTCAGCTACTCAGCCTTCCTCCTTCCCTC
CTTGTCGATAGGTCGGCGAGCATATCCTTTCCCTCATCCAGCATTTGGAA
GATTTTGCGGCCTCGAATGCACTGGAGGACGTGGAGCCATTGACAACCTC
AGGAGTGATGGACAGGTTGGTAGAGCCTGATTGGAGGGGAGCAGCACAGG
CGCTGGGGATGAGTGAGGCCGAGACGTCTGCCTTCCTTCGCGCAATAGCC
GCCCCAACGGCCGCCACCACCACCAGCAGCGGCTGCAGCAGCAGTTCCGC
CGTCACCCCGAAAGACGAGGAGAAGGACGACGACGCTGCCGCTCGTTTCA
CAAATCTTTGGGTCCACGCCATTAGCCAAGCGACTGTCGCACTCCTCCTC
CGCGCTGTCCTAGCCGGCCTTCCTCGCTTGTCGAACAAGGGACTGCAGCA
GCTCCAAACCGACGCGCAATACCTTCTCACGGTCTTTGACAACCTCGCCC
TCCCTCCGCACCCTATCCTCACACACCTCCACACTGTGGCGGGCTGGACG
GAGGAGGAGCTGCGGGGACACATAGAAGGAGGGCGGGCGGGACGGAAGGA
GGGAGGGATTGCGGCGATGCAGTGGAGGGTTGAGAGGCGGATGGCGGAAT
TGCGGGGTATTCTGGTGACATTCCACGGGTGAAGCTCATGCTCGCGAGAG
GAACAGATGAAAGAACTTGGATTGCACAGGGAAAGTTAATTGAGAATAGT
GTGAGACAAATCGTGAGACAGCCTAAATGTTCCTTTGACAGATGGTGACA
CGACAGGCAGCGGATGCAGTAAATAGCATCATCTCGGCTGTTTTTTTCTT
CCGGCGTGCGTCGTAACTGAGCCTCCATTCCTGGGGCTGCCTTCTCTTTC
TTTCCTTGCGGATTAAGTTCTTATTAGGTTGGCTGAGTTTCAGGTTGAGT
GTTGCAATACCACGACCATCTCGCACATTACGGTCTCGGGGTCAAGTGCT
GCAGAGCCACGAAAATTTCCTTGGCTGCCTTTCGCGCCTCTTTGTGCGAG
ATTTACATCCTTCCTTTCTCTTCCTTTCCTCCCGTTCAAGGAAGCAAAAT
GTAATGAAAGAGAAGGCTGAACAAACGCAT
back to top

protein sequence of NO10G00270.2

>NO10G00270.2-protein ID=NO10G00270.2-protein|Name=NO10G00270.2|organism=Nannochloropsis oceanica|type=polypeptide|length=716bp
MRLQLLAQDLNGELEKGLMELTASFPRALAELDRLDTAGRELKNELGHVL
GQVTKAQASRSMKEGEGGEEGEDSDPVEVLARLHQVKTNMTRCRTTLLEA
ARWQQAVRDVNNRMAAGELAQVADKLGQMRKSLEILKDMPEAEERAQALF
NLEKEMEVLLAPRAAAAIQKETLTELQEYAQLYLKLARSDALHDDYAKAR
PAQLHRSWYALGPDEAFSTWLPATFYKQVLDFLTDERRRCSEAFGASAAP
TVLAHLTREIFLPLQGSFQQRLLRLLGPGGATSLKAKGERGGEEEGQEEK
EEGGGFPAVVDLFGSTTQFLSALLPITATAIHTDVIVTVLQPFVVFAERY
ENLEGAALEISIQKKSKRVASLLNQKEGKEGGRGGGKAVSSRMEELLDMC
NSAYPVLEALVERSLAFSAGFHARELLRLTEKHLSADLTSTFPPALHLLR
TLALSPSSTSSSPSSPLPTSRGHFFDNDHLQAALRLLQALGRNLLALRRR
EKEMGRLLGSTVWTQLFSDDAADSHLPSPSSVQVAWVRAVLLSSPPASVP
SSPPASTSGALELKAFLRVFETQQPMPGDLLKGPSRTSASLSWEALSLLH
TLCLSLVRHRLQALTTLDMWGEEGGEKETDALDPGSAAFYSNLPQPYVTQ
VSSFLPSLPALPKVSYSAFLLPSLSIGRRAYPFPHPAFGRFCGLECTGGR
GAIDNLRSDGQVGRA*
back to top

mRNA from alignment at chr10:92609..99750-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>NO10G00270.2 ID=NO10G00270.2|Name=NO10G00270.2|organism=Nannochloropsis oceanica|type=mRNA|length=7142bp|location=Sequence derived from alignment at chr10:92609..99750- (Nannochloropsis oceanica)
GGGAGGGGGGAAAAGGGTCTGCCGCTGGAAGAGAATGATTGCAAAACGGG CTACCAGGCACCGATCATACGCTAGACAGGCGTACACGTGCTGGTGTACG TTCGAATAGACTCCCTGGAAGTGTGATGTGGGTGGGTGTGGGTATAGGTG TAGGCGTAGAGAAGGAGGGGACATGAGGAGGGAGAGGATCTAGATGATAG CCTAACGGGTCCGCGACGCCGCGACGCCGTCCGCGAATCGACTGACGATT GGCAGCTCGCTGGGCGGTTCACGTGCCGAGGCTGCTGGCTTGCCCGTAAA CGGTGGTGGTGCTGCTTTTGAAGGGCTTGACTCAAAGTGTGTCTGTCCGC AGCCATCCCATTTCTCCTCTCGTCTCCTGGTGGACTCGCTGTTTGAACCT CGCTTTTTCTCACGCCCCTCTCTCAACACTTCACAAAAGCCTCATTCTCA CCACAAACCCACACGCAAAAACCAGGCACATTTACCAAGGTACCGTCGGA CCCTCCCGACCAGCCCCTACGTCCTTGTCTCCTTGGCCTTTCCCTCCTTA GTCGCATCAAGCCACACACACACACCCCACGGCACTCATGGACCTCGCCG CGTTCTCCCAGCCGACCTTTGACGCTCAGGAATGGGCAGAAGGCGTGCTG GCCCCGGAGAAGCGCGAAGGTACTCTAATAGATAAGGAAAAACTTCTTGG AAGGATGGGAGAGATTGTTTCATTTCGCAAGTGGCTCCGTTGAACCCCCA CTCCCCTTCCTCCCTCCCTCTATCCCTCCCTTTTCTCACCTTTATAGGCG AGACGCTCGAAGCCTTTCTCGCCAGCGCCTCCATGCGCCTGCAGCTATTG GCCCAAGACTTGAACGGCGAGTTGGAAAAGGGGTTGATGGAATTGACGGC ATCTTTCCCCCGGGCCTTGGCAGAACTTGACCGGCTGGACACGGCGGGGA GGGAGCTCAAGAATGAACTGGGGCATGTGCTGGGGCAGGTAGGGAAGTAA GGGAGGGAGATAGGGAGGGAGAAAGGGAGGGAGAGGGGAAATGAGGGAGG GGTATAAATGCAGCAAGGATAGCTAAGTCAGTTTCGTGTGTCCCATCTCT TTCATTTGTCCACGGTGCAGGTGACGAAGGCACAGGCGTCAAGAAGCATG AAGGAGGGAGAGGGAGGGGAGGAGGGCGAGGACAGTGACCCTGTGGAAGT CCTCGCGCGCTTGCACCAGGTGTGTGGAATAAAGAAAAGACACGTTCAGT GGCCCCTCGATCCTCCCTGCCATCTCTCCCTATGATCTTCTTTCCCGATG GCGCCGACCTGACGATATATCAACTGCCTGTCTGTCTGTCCCTCCCTCCC TTCTTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCTCCGCTCCTCT CCCATTGCAGGTAAAAACCAACATGACTCGGTGCCGCACCACCCTGCTAG AGGCCGCCCGATGGCAGCAAGCGGTGCGGGACGTCAACAACCGCATGGCG GCGGGGGAGCTGGCGCAGGTAGGGAGGGAGGGAAGGAGGGAGGGAGGGGA GAGTTGGTTGATTGAACCTATACTCTGCTTTGTCATTACTCTATACAGGT GGCTGACAAGTTGGGCCAAATGCGGAAGTCACTGGAGATCCTCAAGGACA TGCCCGAGGTGGGTTCCTCCCTCCCGCCCTCCCTCCCGCCCTCCCTCCCT TCTTCCTCTCCTTCCTCCTGCCCCTTCCTCCCTCCCTCCATTCCCCCCTC CGGTACAGGCGGAAGAACGCGCCCAGGCTCTGTTTAATCTTGAGAAAGAG ATGGAGGTGCTGCTCGCCCCCAGAGCGGCCGCGGCCATCCAGAAGGAGAC CTTGACAGAATTGCAGGTAGTTAGGGAGGGAGGGAGGGGGGAAGGGAGGG GACAACATAGTGAAGAACTACCTACCGACTTACTCATTTGTCTACGGTCT GCCTACCCCCTCCAGGAGTACGCCCAGCTCTATCTCAAGCTCGCTCGGTC GGACGCTCTCCACGACGACTACGCGAAGGCCCGCCCTGCGCAGGTGATAT CCTTTCCCTCCCTCCCTCCCTCCCTCCCTCCCTACCCTTCCTCTCTCCTT CGCCAACGGTTCATTGAGTCTGGTATGCACACGGAAACTGACGTACTTTC CCTACTTGTCTCTCTCCTTGCCTCACTCACCCTCCCTCCCTCCCTCCCTC CTTTGCCACAGCTCCATCGAAGCTGGTATGCTCTCGGCCCCGACGAAGCG TTTTCCACCTGGCTCCCTGCCACCTTCTACAAGCAGGTACGTCCCTCTCT CTTTCCCCTCCTCCCTCCCTCCCTCCCTCTTTTTCTTCCCCCCTATCCCC TCCCCCCTTCATCCCTGCCAGCCCACCACCCTCCCACTTACTCACGCATC CACCCTCCTCCCTTTCCTCCCTCCCTCCCTCCCTTTCCCAGGTTTTGGAT TTTCTGACTGATGAGCGACGACGGTGCAGTGAGGCTTTCGGGGCCTCGGC CGCTCCCACCGTCCTCGCCCACCTCACCCGCGAGATCTTCCTGTGAGCAA GCACGCAAGCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCTTCCCTA TGCGATCTGCCCCCCTCCGTTCCGCTGAGCCATTCCCCTTTACTCCTTAT CCTCCCCTCCCTCCCCTCCCCTCCCCGTAGCCCTCTCCAAGGGTCCTTCC AACAGCGCCTCCTCCGCCTCCTGGGACCCGGTGGAGCTACGTCACTCAAG GCCAAGGGAGAGAGAGGGGGGGAGGAAGAGGGGCAGGAAGAGAAGGAGGA AGGGGGGGGCTTTCCGGCGGTGGTTGATTTGTTTGGGAGCACGACTCAGG TAAAGGAAGAAGGGAAGGGCGGAAGAAAGGAAGAAAGGAAGAAGAAGAAG AAGAAGAAGAAGAAGAAGAAACGAAAAAGAAAATAAAAGAAAAGGAAGAA GGGCAGGAAGAGATAAAGGAAGAGACAAAGGAAGAGAGAGGAAGGAAAAA GAGGGGGAACGATGGGGAGAAGGAAAGGAATATGGAGAGGAGGAAGGGGA GGGAAGGATGGCGGTTGAGATGTCTGTTTTTGTACACGTCTCTTGCCTGC TCACTTCTCACACTACCCCTTCCTCCCTCTCCACCTCCTTCCCTTCCTCA AACAGTTCCTCTCGGCCCTCCTCCCCATCACCGCTACGGCTATCCACACC GACGTCATCGTCACCGTCCTCCAGCCCTTCGTCGTCTTCGCCGAGCGGTA CGCCCCCTCCTCCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCTTTCTTCC TTTCTTTAAAGGCTCCCCCTTTTCCACCATTTACCAATCCCTCCCTCCCT CCTCCCCTCCCTCCCTCCCCTCTCCCTCCTTTCTTTTTATCGTAGATATG AGAATTTAGAAGGCGCCGCTCTCGAGATTAGCATCCAAAAAAAGAGCAAG AGAGTGGCCAGCCTGCTAAACCAGAAGGAAGGGAAGGAGGGGGGGAGGGG GGGCGGGAAAGCGGTGTCGTCGCGTATGGAGGAGCTGCTGGATATGTGCA ACAGGTGCGTTAGTGGGGACAAATGATGTCCTCCCTCCCTCCCTTTCTCC CTCCCTTCCTCCCCCTTCCTTCCCTCCCTCCCTCCCTCGAGAGATTACAC GTTTGAAACCTTTCTAAACCACCCCACGCCTCCCCTCCCTTCCCTGCCCC CCTCCCACCTTCCCTCCCTCCCTAGCGCCTACCCCGTGCTCGAGGCCCTG GTCGAGCGCTCTCTCGCCTTCTCCGCCGGCTTCCACGCACGGGAACTGCT GCGCCTCACCGAGGTGGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGAGGA TGTTTTGGGGAGGGAACGGAATTTGATCTGAGATTTGTAAAGAGGCTCAA CGGTCCTTCCTCCGTCCACCCCTCCCTCTCCCACTCCCTCTCTAACTCCC TCCCTCCCGCCCTCCTTCTTTGATGAAACAGAAACATCTCTCTGCTGATT TGACGAGCACGTTTCCCCCCGCCCTCCATCTGCTCCGCACTCTCGCTCTT TCCCCTTCTTCCACTTCCTCCTCCCCCTCCTCCCCCTTGCCAACGTCCCG AGGACATTTTTTCGACAACGATCATCTGCAGGTATGCGAGGGAGGGAGGG AGAGGGGGAGGGAGGGAATGAGTGGGGACAAAAGCTGCCAAGATAGTCAG CCTATATATTATCTTCTTAATCCCTCCCTTATGCCCCTTGCAAATGCAAA CCGCCTCTCATTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCC AGGCCGCCCTCCGTCTCCTCCAGGCCCTCGGTCGCAACCTTCTCGCCTTG CGTCGGCGGGAAAAGGAAATGGGCCGACTCCTCGGCTCAACCGTGTGGAC CCAGCTCTTCAGGTGATTGCCCTCCCTTCCTCCCTACCTCCCCCTCCCTC CATCCTTTGCTTCGCCTCCCTGGGATCGATGCTGCTGCTTTTGTCTGAAT TTGTGTCGAGGACTAGTTTCCCTTCGTATCCTCATGATTATTGCCTACCC CTTACTCCCACCCTCCCTCCCTCCCTCAGCGACGACGCCGCGGACAGCCA CCTCCCCTCCCCCTCCTCCGTCCAGGTTGCCTGGGTGCGGGCCGTCCTCC TGTCCTCCCCCCCTGCCTCCGTCCCTTCCTCCCCCCCTGCCTCGACCTCG GGTGCACTGGAGCTCAAGGCCTTCCTGCGAGTGTTTGAGACGCAACAGCC CATGCCCGGTGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGG AAGGGAAGGAAGGAGCAGGTAGCAGCTGACCACAATCCAGAGCAAAGAGT ATGTCGCGCTCCGATCCACTCATCCCTTTCCTCTCCCTCCCTCCCTCCCT CTCTCCCTCCCTCCTTCCTTCCCCCCCTCTTTCGACAGGCGACCTCCTCA AGGGCCCCTCGCGCACGTCTGCCTCTTTGTCCTGGGAAGCGCTCTCCCTC CTCCACACCCTCTGCCTCTCTCTGGTTCGACATCGGTTGCAGGTAAGGCA AGAAAGCGAGAGGGGAGGAATTGAGGGCGAAAGCGGGTTTCCGATGTACA TAACCCCTACATTATTTTGTACATAAATATGCAAGCATAACATGGCATAT AAATTTATGTAATATGATGTAATACATTACATATATTTATTCCATCAACA GGCTCTGACCACGCTGGATATGTGGGGAGAGGAAGGCGGGGAGAAGGAGA CAGGTACGTTAACGGGTGTGGGCTCCTTACCAATGTACTACTACCTCCCT CTTCTGTCATTTCCCATCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTT TCTCCCTTTCTCCTGCTTCAGACGCTCTGGACCCGGGCTCCGCCGCCTTT TACAGTAATTTGCCCCAGCCCTACGTCACGCAGGTAAGTTCCTTCCTTCC TTCCCTCCCGGCGCTTCCCAAGGTCAGCTACTCAGCCTTCCTCCTTCCCT CCTTGTCGATAGGTCGGCGAGCATATCCTTTCCCTCATCCAGCATTTGGA AGATTTTGCGGCCTCGAATGCACTGGAGGACGTGGAGCCATTGACAACCT CAGGAGTGATGGACAGGTAGGGAAAGGGGGAGGGAAAGGGAGAGGGAAGG AAGGAAGGAGGGGAGCTGTAGTTCGTGGCTCTGACCGCTTCTTTCACATT AGGTTGGTAGAGCCTGATTGGAGGGGAGCAGCACAGGCGCTGGGGATGAG TGAGGCCGAGACGTCTGCCTTCCTTCGCGCAATAGCCGCCCCAACGGCCG CCACCACCACCAGCAGCGGCTGCAGCAGCAGTTCCGCCGTCACCCCGAAA GGTTTGTTGTCTTAGACAGAACGAAATTGAATGTGTGTATGTGTGTGTCT GTGTCTGTGTCTGTGTGTGTCTGTGTGTGTGCCTTCCTATACTCCCTCTG ATTCCATCCACACCATCCATCACATTCCTCCTTTCTCTCTGTCTTTGTAT ATCCCACCTCTTCCAACCCCCCCGACGTCGAAAAGGACGTTAATATTCAC ACCAACCGTCACATCTCTCCTATCTCTCTCTGTCCTTGTATATCCCACCT CTTCCAACCCCTTACAAGACGAGGAGAAGGACGACGACGCTGCCGCTCGT TTCACAAATCTTTGGGTCCACGCCATTAGCCAAGCGACTGTCGCACTCCT CCTCCGCGCTGTCCTAGCCGGCCTTCCTCGCTTGTCGAACAAGGGACTGC AGCAGGTAGGCTACGCTGGGCTGAGGCGCAGAGAGAGGAAGGGAAGAAGG AAGGGAGGGATGTAGGGAGGGAGTGAAGGGAGGTGCTTCGGCGCCTGTTG TTCCCTCTTGTTTTTTTTGGGTCGGGGGAAGGGAATGGTTGTGTTTGTGA TCATCTCTCATCCTTCTTCTGCAACCAACACCTCCCTCCTCTTTCCCCGA TATCTCTCACTAGCTCCAAACCGACGCGCAATACCTTCTCACGGTCTTTG ACAACCTCGCCCTCCCTCCGCACCCTATCCTCACACACCTCCACACTGTG GCGGGCTGGACGGAGGAGGAGCTGCGGGGACACATAGAAGGAGGGCGGGC GGGACGGAAGGAGGGAGGGATTGCGGCGATGCAGTGGAGGGTTGAGAGGC GGATGGCGGAATTGCGGGGTATTCTGGTGACATTCCACGGGTGAAGCTCA TGCTCGCGAGAGGAACAGATGAAAGAACTTGGATTGCACAGGGAAAGTTA ATTGAGAATAGTGTGAGACAAATCGTGAGACAGCCTAAATGTTCCTTTGA CAGATGGTGACACGACAGGCAGCGGATGCAGTAAATAGCATCATCTCGGC TGTTTTTTTCTTCCGGCGTGCGTCGTAACTGAGCCTCCATTCCTGGGGCT GCCTTCTCTTTCTTTCCTTGCGGATTAAGTTCTTATTAGGTTGGCTGAGT TTCAGGTTGAGTGTTGCAATACCACGACCATCTCGCACATTACGGTCTCG GGGTCAAGTGCTGCAGAGCCACGAAAATTTCCTTGGCTGCCTTTCGCGCC TCTTTGTGCGAGATTTACATCCTTCCTTTCTCTTCCTTTCCTCCCGTTCA AGGAAGCAAAATGTAATGAAAGAGAAGGCTGAACAAACGCAT
back to top

Coding sequence (CDS) from alignment at chr10:92609..99750-

>NO10G00270.2 ID=NO10G00270.2|Name=NO10G00270.2|organism=Nannochloropsis oceanica|type=CDS|length=2148bp|location=Sequence derived from alignment at chr10:92609..99750- (Nannochloropsis oceanica)
ATGCGCCTGCAGCTATTGGCCCAAGACTTGAACGGCGAGTTGGAAAAGGG
GTTGATGGAATTGACGGCATCTTTCCCCCGGGCCTTGGCAGAACTTGACC
GGCTGGACACGGCGGGGAGGGAGCTCAAGAATGAACTGGGGCATGTGCTG
GGGCAGGTGACGAAGGCACAGGCGTCAAGAAGCATGAAGGAGGGAGAGGG
AGGGGAGGAGGGCGAGGACAGTGACCCTGTGGAAGTCCTCGCGCGCTTGC
ACCAGGTAAAAACCAACATGACTCGGTGCCGCACCACCCTGCTAGAGGCC
GCCCGATGGCAGCAAGCGGTGCGGGACGTCAACAACCGCATGGCGGCGGG
GGAGCTGGCGCAGGTGGCTGACAAGTTGGGCCAAATGCGGAAGTCACTGG
AGATCCTCAAGGACATGCCCGAGGCGGAAGAACGCGCCCAGGCTCTGTTT
AATCTTGAGAAAGAGATGGAGGTGCTGCTCGCCCCCAGAGCGGCCGCGGC
CATCCAGAAGGAGACCTTGACAGAATTGCAGGAGTACGCCCAGCTCTATC
TCAAGCTCGCTCGGTCGGACGCTCTCCACGACGACTACGCGAAGGCCCGC
CCTGCGCAGCTCCATCGAAGCTGGTATGCTCTCGGCCCCGACGAAGCGTT
TTCCACCTGGCTCCCTGCCACCTTCTACAAGCAGGTTTTGGATTTTCTGA
CTGATGAGCGACGACGGTGCAGTGAGGCTTTCGGGGCCTCGGCCGCTCCC
ACCGTCCTCGCCCACCTCACCCGCGAGATCTTCCTCCCTCTCCAAGGGTC
CTTCCAACAGCGCCTCCTCCGCCTCCTGGGACCCGGTGGAGCTACGTCAC
TCAAGGCCAAGGGAGAGAGAGGGGGGGAGGAAGAGGGGCAGGAAGAGAAG
GAGGAAGGGGGGGGCTTTCCGGCGGTGGTTGATTTGTTTGGGAGCACGAC
TCAGTTCCTCTCGGCCCTCCTCCCCATCACCGCTACGGCTATCCACACCG
ACGTCATCGTCACCGTCCTCCAGCCCTTCGTCGTCTTCGCCGAGCGATAT
GAGAATTTAGAAGGCGCCGCTCTCGAGATTAGCATCCAAAAAAAGAGCAA
GAGAGTGGCCAGCCTGCTAAACCAGAAGGAAGGGAAGGAGGGGGGGAGGG
GGGGCGGGAAAGCGGTGTCGTCGCGTATGGAGGAGCTGCTGGATATGTGC
AACAGCGCCTACCCCGTGCTCGAGGCCCTGGTCGAGCGCTCTCTCGCCTT
CTCCGCCGGCTTCCACGCACGGGAACTGCTGCGCCTCACCGAGAAACATC
TCTCTGCTGATTTGACGAGCACGTTTCCCCCCGCCCTCCATCTGCTCCGC
ACTCTCGCTCTTTCCCCTTCTTCCACTTCCTCCTCCCCCTCCTCCCCCTT
GCCAACGTCCCGAGGACATTTTTTCGACAACGATCATCTGCAGGCCGCCC
TCCGTCTCCTCCAGGCCCTCGGTCGCAACCTTCTCGCCTTGCGTCGGCGG
GAAAAGGAAATGGGCCGACTCCTCGGCTCAACCGTGTGGACCCAGCTCTT
CAGCGACGACGCCGCGGACAGCCACCTCCCCTCCCCCTCCTCCGTCCAGG
TTGCCTGGGTGCGGGCCGTCCTCCTGTCCTCCCCCCCTGCCTCCGTCCCT
TCCTCCCCCCCTGCCTCGACCTCGGGTGCACTGGAGCTCAAGGCCTTCCT
GCGAGTGTTTGAGACGCAACAGCCCATGCCCGGCGACCTCCTCAAGGGCC
CCTCGCGCACGTCTGCCTCTTTGTCCTGGGAAGCGCTCTCCCTCCTCCAC
ACCCTCTGCCTCTCTCTGGTTCGACATCGGTTGCAGGCTCTGACCACGCT
GGATATGTGGGGAGAGGAAGGCGGGGAGAAGGAGACAGACGCTCTGGACC
CGGGCTCCGCCGCCTTTTACAGTAATTTGCCCCAGCCCTACGTCACGCAG
GTAAGTTCCTTCCTTCCTTCCCTCCCGGCGCTTCCCAAGGTCAGCTACTC
AGCCTTCCTCCTTCCCTCCTTGTCGATAGGTCGGCGAGCATATCCTTTCC
CTCATCCAGCATTTGGAAGATTTTGCGGCCTCGAATGCACTGGAGGACGT
GGAGCCATTGACAACCTCAGGAGTGATGGACAGGTTGGTAGAGCCTGA
back to top
Synonyms
Publications