NO10G00200.1, NO10G00200.1 (mRNA) Nannochloropsis oceanica | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	NO10G00200.1
Unique Name	NO10G00200.1
Type	mRNA
Organism	Nannochloropsis oceanica (N. oceanica IMET1)
Sequence length	3461
Alignment location	chr10:65613..71810 +

Link to JBrowse

Properties

Mutants

Expression

No biomaterial libraries express this feature.

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
chr10	genome	chr10:65613..71810 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Gene prediction for N. oceanica IMET1	2017-10-24
Homology annotation for N. oceanica IMET1	2017-10-25
InterPro analysis for N. oceanica IMET1	2017-10-25

Annotated Terms

Homology

[Close]

BLAST of NO10G00200.1 vs.
Match: GAX98352.1 (peptidyl-prolyl cis-trans isomerase [Pythium insidiosum])

HSP 1 Score: 540.4 bits (1391), Expect = 5.900e-150
Identity = 275/469 (58.64%), Postives = 344/469 (73.35%), Query Frame = 0

Query:   46 DGGLLKKILKEGEGESPPQGNEVVAHYTGTLESDGSEFDSSRKRNQPFKFTIGQQQVIKGWDVGFATMKVGEHAILKCRHDYGYGESGSPPSIPPKATLCFDVELLSFAPKKKEKWEMSSEERVAEAVKLKEVARGLFKEQRWGEAASEYIEAGSYVDGLN--EEDDASTMDAAAALSVTLHSNAALAFLKAEMWPEAAQEASAALKKEAGSAKALYRRGVARMHLGLLEEAREDLLSAAKADPQNKDIRVQLQAVKDKLKSMAAKEKATFGGFLNKLSMYDDKEGILAHEGP---NPKVFMDVTIGGEKAGRITMELFADSVPRTAENFRCLCTGEKGQSKTTGNLLSYKGSGFHRVIKDFMIQGGDFTHGDGTGGESIYGEKFKDENFKRSHTEPGLLSMANAGPNTNGSQFFITTKDTPHLDGRHVVFGKVTDGMELVHRIEDLPKDEKDKPLEAVVIEACGEIKE 510
            +GG++K+I  EG GE+PP+G E+ AHYTGTL  DG++FDSSR R+  FKF +G+  VIK WD+ FATMKVGE A++ C+ +Y YG SGSPP IPP ATL FDVELL F+PKKKE WEM ++E++AE  KLKE    LFK +++ +A ++Y EA SY++ L   EEDD   M        T + N+A+ +LK   + EA   AS AL  +A S KAL+RRGV RMHL  L+ A+EDLL+A K DPQN+++R +L+ +K K+K   AKEK+ FGG   K+SMY+DKE +     P   NPKVF D+TIG E AG+I M+LF D  P+TAENFR LCTGEKG+  +TG  L YKGS FHRVIK FMIQGGDFT+GDGTGGESIYGEKF DENF+  HTEPGLLSMANAGP TNGSQFFITT  TPHLDG+HVVFGKV +GM++V +IE+   D+ DKP  AV+I  CG  ++
Sbjct:  587 NGGVIKEIYHEGAGETPPEGYEIRAHYTGTL-LDGTKFDSSRDRDAEFKFVLGRGNVIKAWDLAFATMKVGEKAVITCKPEYAYGASGSPPKIPPNATLKFDVELLGFSPKKKEMWEMDADEKLAEGTKLKEEGTELFKAKKFSDAVAKYNEAASYMEDLYDIEEDDKKKMKE---FQTTCYLNSAMCYLKISDYAEAVAVASKALANDAKSVKALFRRGVGRMHLNDLDRAKEDLLAAGKIDPQNREVRRELEVLKQKMKDARAKEKSVFGGLFGKVSMYNDKEDVEMEPVPDPNNPKVFFDITIGDEPAGKIVMQLFKDITPKTAENFRALCTGEKGKC-STGQPLHYKGSSFHRVIKSFMIQGGDFTNGDGTGGESIYGEKFPDENFRLKHTEPGLLSMANAGPGTNGSQFFITTVPTPHLDGKHVVFGKVVEGMDVVRKIEEQETDKGDKPKHAVIIADCGVFED 1050

The following BLAST results are available for this feature:

BLAST of NO10G00200.1 vs.

BLAST of NO10G00200.1 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 1


Match Name	E-value	Identity	Description
GAX98352.1	5.900e-150	58.64	peptidyl-prolyl cis-trans isomerase [Pythium insid...	[more]

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
NO10G00200	NO10G00200	Nannochloropsis oceanica (N. oceanica IMET1)	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
NO10G00200.1	NO10G00200.1-protein	Nannochloropsis oceanica (N. oceanica IMET1)	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
NO10G00200.1.cds1	NO10G00200.1.cds1	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO10G00200.1.cds2	NO10G00200.1.cds2	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO10G00200.1.cds3	NO10G00200.1.cds3	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO10G00200.1.cds4	NO10G00200.1.cds4	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO10G00200.1.cds5	NO10G00200.1.cds5	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO10G00200.1.cds6	NO10G00200.1.cds6	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO10G00200.1.cds7	NO10G00200.1.cds7	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO10G00200.1.cds8	NO10G00200.1.cds8	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO10G00200.1.cds9	NO10G00200.1.cds9	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO10G00200.1.cds10	NO10G00200.1.cds10	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO10G00200.1.cds11	NO10G00200.1.cds11	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO10G00200.1.cds12	NO10G00200.1.cds12	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO10G00200.1.cds13	NO10G00200.1.cds13	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO10G00200.1.cds14	NO10G00200.1.cds14	Nannochloropsis oceanica (N. oceanica IMET1)	CDS

Sequences

The following sequences are available for this feature:

mRNA sequence
protein sequence
mRNA from alignment at chr10:65613..71810+
coding sequence from alignment at chr10:65613..71810+

mRNA sequence

>NO10G00200.1 ID=NO10G00200.1|Name=NO10G00200.1|organism=Nannochloropsis oceanica|type=mRNA|length=3461bp
CCTCGTTCTCGACCTCGTCTTCCTCCTCGTCCATGCATGCCTCCTCCTCC
ACCGCCTTCCCCTCCCCTCCGCCCATCTTCCGCGGATCATGCAAGACGGA
GACGCGTCTCTTCTTCCCTCTCTCCCTCCCTCCCTTCCTCTCTCCCTGCT
TGTCCCACACGCGCATTTCCCTCTCAAACACATGCCCTGTTGATTCTTGG
CTCGGGAAGGAGAGGAAGGGAGGGCGGGCGGGAGGGAGGGAGGACCAGCG
AGGGCTGTTCATATGTGAGGGGGAACTTGGGGCTCGCGGTGATGATGGTG
GTGGCTTGGAAGGGGGTAGGGCAGGAAAGGAGGAGGAGGAAGGGGAGCAG
GAGGAAAATGAGGAGGACGGAGGGGCTGAAGAATTCGCTTGTTGGTTCTG
TCCACTCATCTCTGACTGCGGCTGCTGCTGCTGCTCTTGCAAAGGAGGAG
GGAGAGCAGGGAGAATGGTCGACGAAGAAAGGAGGAGGGCAGCAGCCATA
TCCTCATCCTGCTGCTGCTGCTGCCCCTGCTGCTGCTGCTGCCCCTGCTG
CTGCTGATTTTCGGGATCTGGAGGCATCATCCCATACCCCTGTTCGTCCT
GTGCCGGTTGTGATATAGGCGACCTCCTTGTGTCTCCCGGTCCTGCTGCT
ACTGCTGCGTCCCGTGGCACGGGAGCGCTTGACGACCTGCCCGTCGGTAG
CTTCACATTGGTGGATGGCGCAGTGATAGGCAGTAGAGGAGGAGGAAATA
GAGCCACGGCCCGTTCTCCTGACTTGCCTTCCTCCTCAGGCGGTGGTGTG
GGTAGAGGTTGTGCAGGTGGCACTGGCAAAGGTTCTTGAGGAGGCCGACC
AGCAGCACCGGCAGCGGCGATATCAGCACGAGCAACGGCTGTTTGTATGT
GACCTTCATCCTCGTCATCCTCTTCCCCCTTCATCTCCTCCTCCTCGTCG
TCGTCATCTTCCTCTTCCTCTTCATCTTCCTCCTCCTCCTTCCCATCCAC
GGCGCTATTGAACGCCTCCAATGCCGTATCCAGCTTGTCAAGCACGCGGT
TGAAAAACGATGCCATGCCTTCCTGCGTGAGGAAGGAGGATGGGGGCGGA
GGGAAGGGTTGGAAGGAGGGGAAGGGAGGGAGAGTTGCGATGAATATGGG
CAAGCGGTTCTGGTGCATCATCCTACTCAGCCACGTCGTCGCTCTGATAG
TCGTAGGCTTCCGACAGGACGATTCAGGATGCATACCGGTCGTTCCACTG
TTGTTGCTGCTGCTACTTTGTAAACGGAAAGGGACTCTGCATCGATGTGC
TTTGATGTCTTGCCAGTGCCCAATTGATTTTTGCCGGCGATTGAACGTGC
AGTAACAAACAGCGAGAGCGGTCTGCTTGCCACAAGTTGCCAGGCCCAAT
GTGTTCTCTATGTACTGTGTGTGTAAAGTAGGGATTGAGTAAAACTTGAG
GCCATGGCACCATAGCCTGCCGTACAAGCGTGCGGGTGCGATCGATGACA
CCCTTTGGTTGGTCGGGTAGGGGTGGTAAGGGGAAGAAGAGATGTAGATA
GCTTATTCGATTGGCGAATAATGGAAGCTCTTGCTTGCCACTACATTTTC
TATTTCCATCGCCTCCAAAAACCAAGCCACGCCATGGCATCCACAATTGT
ACAGGATGCTTAGCTTCCTGACAGTGGTTGTAGGGATGCGGGATGGTTCC
ATGCCTACCATTTGAATAGAGCGTGCGATTTCCTTATCGACCTCCCCTCC
CTCTCGACTATGGAAATTTCCATGCCCACCACACCCTCTTTTCCTTTTCC
CTTTCTCTCTTCAGGCTTGTCTACCCACGTAGACGCATACCTACCGAATA
TGGCTGCTGACAAAACGAATGGGGAGTGGATCGACGTGAGCGGGGACGGA
GGATTGCTGAAAAAGATCTTGAAGGAAGGCGAAGGCGAGTCGCCGCCGCA
GGGGAATGAAGTGGTGGCACACTACACGGGCACGCTCGAAAGCGACGGCT
CGGAGTTCGACTCCTCCCGGAAGCGCAATCAGCCATTTAAGTTCACGATC
GGGCAGCAGCAAGTGATCAAAGGATGGGATGTCGGCTTTGCCACCATGAA
GGTTGGCGAACACGCCATCCTCAAGTGCCGCCACGACTACGGTTACGGGG
AGAGCGGGAGCCCTCCCTCCATCCCTCCTAAGGCCACGTTATGCTTCGAC
GTGGAGCTTTTATCATTTGCGCCCAAGAAGAAGGAGAAATGGGAGATGTC
CAGCGAGGAACGGGTGGCGGAGGCCGTCAAGCTCAAGGAGGTCGCCAGGG
GGCTCTTCAAGGAGCAGCGATGGGGCGAGGCCGCCTCCGAGTACATCGAA
GCGGGGTCATATGTCGATGGGTTGAATGAGGAAGACGATGCCAGCACCAT
GGATGCAGCTGCTGCCTTGAGTGTGACGCTGCACAGCAACGCCGCCCTGG
CGTTCCTCAAGGCGGAGATGTGGCCCGAGGCCGCGCAAGAAGCGAGTGCG
GCACTTAAGAAGGAGGCAGGCAGTGCCAAGGCTCTGTACCGACGAGGCGT
GGCCCGGATGCACCTGGGATTGCTGGAGGAAGCACGAGAGGATTTGCTGT
CCGCAGCCAAAGCGGATCCTCAGAACAAAGACATTCGGGTGCAGCTCCAG
GCGGTGAAGGACAAATTGAAGTCGATGGCGGCGAAGGAGAAGGCTACGTT
TGGCGGGTTTTTGAACAAGCTCTCTATGTACGACGACAAGGAGGGCATCC
TTGCTCACGAGGGGCCTAATCCCAAGGTCTTCATGGACGTGACGATCGGA
GGGGAGAAGGCGGGAAGGATCACAATGGAGCTCTTCGCGGACTCTGTGCC
CAGGACGGCGGAGAACTTCCGCTGCCTCTGCACGGGCGAGAAAGGTCAGA
GCAAGACCACGGGCAACCTCCTCTCCTACAAGGGCTCGGGCTTCCATCGC
GTCATCAAGGACTTCATGATCCAGGGGGGCGATTTCACCCACGGCGATGG
CACGGGCGGGGAGTCGATCTACGGGGAGAAATTCAAAGATGAGAATTTCA
AAAGGTCGCACACGGAGCCCGGCCTCCTCTCCATGGCCAACGCTGGGCCC
AACACGAACGGCTCGCAGTTTTTCATCACCACCAAAGACACCCCCCACCT
GGACGGCCGGCACGTGGTCTTCGGGAAGGTCACGGACGGAATGGAGTTGG
TGCACCGCATCGAAGATTTGCCCAAAGACGAGAAAGACAAGCCCTTGGAG
GCCGTGGTGATTGAGGCATGCGGGGAGATCAAGGAGTAGGGATAGAGGGA
GGGAGTGTGGGAGGCAGAAGGAGCACTGGATGGACGACATGCATCAAGGA
CAAGAAGGAGAAGCGTATGGAGACCGTGGTGATGGTGGGATTGCGAGGAA
GGTAGGGAAGAAGGAGGAGGAGGAGGAGGGGAGGAGGAGGAGGAGGAGGA
GGAGGAGAAGG

protein sequence of NO10G00200.1

>NO10G00200.1-protein ID=NO10G00200.1-protein|Name=NO10G00200.1|organism=Nannochloropsis oceanica|type=polypeptide|length=510bp
MEISMPTTPSFPFPFLSSGLSTHVDAYLPNMAADKTNGEWIDVSGDGGLL
KKILKEGEGESPPQGNEVVAHYTGTLESDGSEFDSSRKRNQPFKFTIGQQ
QVIKGWDVGFATMKVGEHAILKCRHDYGYGESGSPPSIPPKATLCFDVEL
LSFAPKKKEKWEMSSEERVAEAVKLKEVARGLFKEQRWGEAASEYIEAGS
YVDGLNEEDDASTMDAAAALSVTLHSNAALAFLKAEMWPEAAQEASAALK
KEAGSAKALYRRGVARMHLGLLEEAREDLLSAAKADPQNKDIRVQLQAVK
DKLKSMAAKEKATFGGFLNKLSMYDDKEGILAHEGPNPKVFMDVTIGGEK
AGRITMELFADSVPRTAENFRCLCTGEKGQSKTTGNLLSYKGSGFHRVIK
DFMIQGGDFTHGDGTGGESIYGEKFKDENFKRSHTEPGLLSMANAGPNTN
GSQFFITTKDTPHLDGRHVVFGKVTDGMELVHRIEDLPKDEKDKPLEAVV
IEACGEIKE*

mRNA from alignment at chr10:65613..71810+

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>NO10G00200.1 ID=NO10G00200.1|Name=NO10G00200.1|organism=Nannochloropsis oceanica|type=mRNA|length=6198bp|location=Sequence derived from alignment at chr10:65613..71810+ (Nannochloropsis oceanica)
CCTCGTTCTCGACCTCGTCTTCCTCCTCGTCCATGCATGCCTCCTCCTCC
ACCGCCTTCCCCTCCCCTCCGCCCATCTTCCGCGGATCATGCAAGACGGA
GACGCGTCTCTTCTTCCCTCTCTCCCTCCCTCCCTTCCTCTCTCCCTGCT
TGTCCCACACGCGCATTTCCCTCTCAAACACATGCCCTGTTGATTCTTGG
CTCGGGAAGGAGAGGAAGGGAGGGCGGGCGGGAGGGAGGGAGGACCAGCG
AGGGCTGTTCATATGTGAGGGGGAACTTGGGGCTCGCGGTGATGATGGTG
GTGGCTTGGAAGGGGGTAGGGCAGGAAAGGAGGAGGAGGAAGGGGAGCAG
GAGGAAAATGAGGAGGACGGAGGGGCTGAAGAATTCGCTTGTTGGTTCTG
TCCACTCATCTCTGACTGCGGCTGCTGCTGCTGCTCTTGCAAAGGAGGAG
GGAGAGCAGGGAGAATGGTCGACGAAGAAAGGAGGAGGGCAGCAGCCATA
TCCTCATCCTGCTGCTGCTGCTGCCCCTGCTGCTGCTGCTGCCCCTGCTG
CTGCTGATTTTCGGGATCTGGAGGCATCATCCCATACCCCTGTTCGTCCT
GTGCCGGTTGTGATATAGGCGACCTCCTTGTGTCTCCCGGTCCTGCTGCT
ACTGCTGCGTCCCGTGGCACGGGAGCGCTTGACGACCTGCCCGTCGGTAG
CTTCACATTGGTGGATGGCGCAGTGATAGGCAGTAGAGGAGGAGGAAATA
GAGCCACGGCCCGTTCTCCTGACTTGCCTTCCTCCTCAGGCGGTGGTGTG
GGTAGAGGTTGTGCAGGTGGCACTGGCAAAGGTTCTTGAGGAGGCCGACC
AGCAGCACCGGCAGCGGCGATATCAGCACGAGCAACGGCTGTTTGTATGT
GACCTTCATCCTCGTCATCCTCTTCCCCCTTCATCTCCTCCTCCTCGTCG
TCGTCATCTTCCTCTTCCTCTTCATCTTCCTCCTCCTCCTTCCCATCCAC
GGCGCTATTGAACGCCTCCAATGCCGTATCCAGCTTGTCAAGCACGCGGT
TGAAAAACGATGCCATGCCTTCCTGCGTGAGGAAGGAGGATGGGGGCGGA
GGGAAGGGTTGGAAGGAGGGGAAGGGAGGGAGAGTTGCGATGAATATGGG
CAAGCGGTTCTGGTGCATCATCCTACTCAGCCACGTCGTCGCTCTGATAG
TCGTAGGCTTCCGACAGGACGATTCAGGATGCATACCGGTCGTTCCACTG
TTGTTGCTGCTGCTACTTTGTAAACGGAAAGGGACTCTGCATCGATGTGC
TTTGATGTCTTGCCAGTGCCCAATTGATTTTTGCCGGCGATTGAACGTGC
AGTAACAAACAGCGAGAGCGGTCTGCTTGCCACAAGTTGCCAGGCCCAAT
GTGTTCTCTATGTACTGTGTGTGTAAAGTAGGGATTGAGTAAAACTTGAG
GCCATGGCACCATAGCCTGCCGTACAAGCGTGCGGGTGCGATCGATGACA
CCCTTTGGTTGGTCGGGTAGGGGTGGTAAGGGGAAGAAGAGATGTAGATA
GCTTATTCGATTGGCGAATAATGGAAGCTCTTGCTTGCCACTACATTTTC
TATTTCCATCGCCTCCAAAAACCAAGCCACGCCATGGCATCCACAATTGT
ACAGGATGCTTAGCTTCCTGACAGTGGTTGTAGGGATGCGGGATGGTTCC
ATGCCTACCATTTGAATAGAGCGTGCGATTTCCTTATCGACCTCCCCTCC
CTCTCGACTATGGAAATTTCCATGCCCACCACACCCTCTTTTCCTTTTCC
CTTTCTCTCTTCAGGCTTGTCTACCCACGTAGACGCATACCTACCGAATA
TGGCTGCTGACAAAACGAATGGGGAGTGGATCGACGTGAGCGGGGACGGA
GGATTGCTGAAAAAGGTAATTTGTTCATAGAGGAACGGATACGGAGGGTA
GGAGTGAGGGGAGGGCTAACCCCAGTAGGAGGACAAATGAAAGTCGTTAT
GTGCTGACCAAAATCATTTTTCTGGTTTTTCTAACACGACAGATCTTGAA
GGAAGGCGAAGGCGAGTCGCCGCCGCAGGGGAATGAAGTGGTGGCACACT
ACACGGGCACGCTCGAAAGCGACGGCTCGGAGTTCGGTATGTGCGATGGA
AGCTGAGAAAGTTGGGAAGGATGGAGGGAGTGAAGGCAAATGGGGGACTG
AAAAAGAGATGTGTGAGGACGAAGAGGCTTGAGCAGGCGGAAAAATGACT
CGGTATGGTGGCTTTCCATCGACCTCTCCTGACTCCTTTTTCTTCCCTTC
TTCCTTCAGACTCCTCCCGGAAGCGCAATCAGCCATTTAAGTTCACGATC
GGGCAGCAGCAAGTGATCAAAGGATGGGATGTCGGCTTTGCCACCATGAA
GGTAGAGAGGGAGGGAGGGAGGGAGGGAGGGAGGAAGGGAGGGAGGGAGG
GAGGGAGGGAGGGAAGGAATGCTGCTGTGCAGTGTAACGGAGTCTGTTCG
AGGACACATTGAGGTCCCTAAGGCTTCTGCTTTGAACCAATCAACCCATC
TCCCAATTGATGCACATGCATTCCTCCCCTCACTCTCTCCATCCCTTCCT
CTTCCATGTCCCCCCCGCTCGCAGGTTGGCGAACACGCCATCCTCAAGTG
CCGCCACGACTACGGTTACGGGGAGAGCGGGAGCCCTCCCTCCATCCCTC
CTAAGGCCACGTTATGCTTCGACGTGGAGCTTTTATCATTTGCGCCCAAG
AAGAAGGAGAAATGGGAGATGTCCAGCGAGGAACGGGTGGCGGAGGCCGT
CAAGCTCAAGGAGGTGGGCGGCTTGCTTGCTTCTCCTCTCCCGTCTCTGC
CATATTTCTCCTCTATTATCCCTTTTATCCCTCTTTCTGCTGACCTTGTC
TCCTTCACAGCCTTGCTAAGATGATACTGCAATGCCGGGAAAGTCGAGAG
GCCGGAAATCTCACCCCTCCTTTTCTCCCTCTCTCTCTTTCTCTCCCTCC
CTCTCTCTCTCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCCTGCAGG
TCGCCAGGGGGCTCTTCAAGGAGCAGCGATGGGGCGAGGCCGCCTCCGAG
TACATCGAAGCGGGGTCATATGTCGATGGGTTGAATGTAAGGAAGGAGGG
AGGAAGGAAGGAAGGGAAGAAGGTAGATAGAGAGGGAAGGAGATAAGGAG
GAAAATACGGCAACCGAGCGCCTGTTTCTCTGTGATTGCCTTGTCAACAT
TCCCTTTCACTCCCGCCCTCCCTCCCTCCCTCCCTCCCTCCCTGTCCATT
CAGGAGGAAGACGATGCCAGCACCATGGATGCAGCTGCTGCCTTGAGTGT
GACGCTGCACAGCAACGCCGCCCTGGCGTTCCTCAAGGCGGAGGTAGGAA
GGGAGGAAGAAACGTTGCGGTTTTGTTTCACATGACAGTACTCACTCCAA
CACATTATCTCCCCCACCCTCTTTCCCTCCCTTCCGTCCCCCTTTCCCTC
CCTTCCGTCCTCCCTCAGATGTGGCCCGAGGCCGCGCAAGAAGCGAGTGC
GGCACTTAAGAAGGAGGCAGGCAGTGCCAAGGCTCTGTACCGACGAGGTA
GGTCCGGTCATGTGAGGAGGGTGTTTCTCGTCCCCTTCCTGTTTCCCTGG
TCCTGTCATGTGAAAAGGGTGTTTCTCGTCCCCCGCCTTCTCGTTCCCTC
CCTCTTTTCCTCCCTACCTCCCCTCTTTGTGCCCTTGCGCCTTTTCTCTT
CTTCTTCGTCCTCTTCTTCTTCTTCTTCTTCTTCTTCTTTTCCTCCTTCT
CGGCGTGGCTCGTGCGTCTTCCGGATGAAATGAAGGACTGAAGATCGTCG
ACCCATGGCACCTTCCCCTCCCTTCCGCCCTCCCTCTCTCCCTCCCTCCC
TCGTTAGGCGTGGCCCGGATGCACCTGGGATTGCTGGAGGAAGCACGAGA
GGATTTGCTGTCCGCAGCCAAAGCGGATCCTCAGAACAAAGACATTCGGG
TGCAGGTAGGGAGGGCAGGAGGGAGGGAGGGAGGGCGGGAGTAGGGGAGG
GAGAGAGGAAGGGCGAATTGGACCAGAGCTTAAGTAGAAAGATCGGAAGG
GAAGAGGGAGGGAGGGAGGGAGGGAGGGAGGAAGGAAGTATTGTCGTACT
GCACCCGGCGTTCACCGTTTGAAAACCCTGCGTACTCATGCCTCTTTCCT
CCCTCCCTCCCTCCTTCCCCTCTTCCCTCCCTCCCTCAGCTCCAGGCGGT
GAAGGACAAATTGAAGTCGATGGCGGCGAAGGAGAAGGCTACGTTTGGCG
GGTAGGGAGGGAGGGAGGGAGGAAGGGAGGGAGGAGGAAGGGAGGAGGAA
GGGAGGGAGGAAGGGAGGGAGGAAGGGAGGGAGGAAGGGAGGGAAGGGAG
GGAGGAAGGGAGGGAGGAAGGGAGGGAGGAAGGGAGGGAGGAAGGGAGGG
AGGAAGGGAAGGAAGATAGTGAGGGAAGGAGGGAGGAAGGGAAGGAGGGA
GGAAGGGAATAGGAGGAAGGGAATAGGAGGAAGGGAGGTATGGCGAGTGC
GATTTCACGATTGATATCGACATGTCTTCCAATCTGATCCACATCCCTCC
CTCTCTCCCTCCCTCCCTCTCCAGGTTTTTGAACAAGCTCTCTATGTACG
ACGACAAGGAGGGCATCCTTGCTCACGAGGGGCCTAATCCCAAGGTCTTC
ATGGACGTGACGATCGGAGGGGAGAAGGCGGGAAGGTAGGGAGGGAAGGG
AGGAGGGCGGGAAGGAGAGAGGGAGAGAAGGATAGTCTGCAGTCTAATTG
TAGCCACGTGATGTTCGATTCGAAATCGACGCGAGCGATTGAAGGAACGA
GAAGAGAAGATACGATGACGATGTATCCCTCCGTCCGAGACCAGGAGACA
CTCACCCTCAACCGTTCCCTCCCTCCCTCCCTACCCAGGATCACAATGGA
GCTCTTCGCGGACTCTGTGCCCAGGACGGCGGAGAACTTCCGCTGCCTCT
GCACGGGCGAGAAAGGTCAGAGCAAGACCACGGGCAACCTCCTCTCCTAC
AAGGGCTCGGGCTTCCATCGCGTCATCAAGGCACGTCCCGCTCGCCCTCC
CTCCATCCCTCCCTCTTTCCTTCCTTCCCTTCCGCCCTCATCCTCTTCGT
GTGGCATCGACGAACGGCTCGGCTTACGTACGCACGCACACTCACGCTCC
ATCCCCTCCCTCCCTCCCTCCCTCCCTCCCCCCTCTCAAAGGACTTCATG
ATCCAGGGGGGCGATTTCACCCACGGCGATGGCACGGGCGGGGAGTCGAT
CTACGGGGAGAAATTCAAAGATGAGAATTTCAAAAGGTCGCACACGGTAC
GTCCCTCCCTCTCTGCCCCCTCCCTCCTGCCCTCCCTCCCTCCCTCCTCC
CTCCCTTCCTTTCGCTTCGCCCTTCCGGACCAGGCGATGAAACCCCTCCT
TCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCTTCCCTTCCCAGGAGCCCG
GCCTCCTCTCCATGGCCAACGCTGGGCCCAACACGAACGGCTCGCAGTTT
TTCATCACCACCAAAGACACCCCCCACCTGGACGGCCGGCACGTGGTCTT
CGGGAAGGTAGGGAGGGAGGGAGAGAGGGAGAGAGGGAGGGAGGGAGGGA
GGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGGAACTATATAT
ACATATATATATCTCATATATGTCTAGAGCGATTCTACCGCCAGCTGCTT
TGGATAATTCAATATCCCGAATCCTACTGTGTCCATTCCCCCCTCCCTCT
TTTTCTCGTGAATCTTCTCCCTGGCCCTCCTCTTCATTTTCTCCTTCTTC
CTCATCACCACGCTTCTCCCTCTTCCTTCCCTCCCTCCCCCGCTCCCTTC
CTCGCCCCTCCGCAGGTCACGGACGGAATGGAGTTGGTGCACCGCATCGA
AGATTTGCCCAAAGACGAGAAAGACAAGCCCTTGGAGGCCGTGGTGATTG
AGGCATGCGGGGAGATCAAGGAGTAGGGATAGAGGGAGGGAGTGTGGGAG
GCAGAAGGAGCACTGGATGGACGACATGCATCAAGGACAAGAAGGAGAAG
CGTATGGAGACCGTGGTGATGGTGGGATTGCGAGGAAGGTAGGGAAGAAG
GAGGAGGAGGAGGAGGGGAGGAGGAGGAGGAGGAGGAGGAGGAGAAGG

Coding sequence (CDS) from alignment at chr10:65613..71810+

>NO10G00200.1 ID=NO10G00200.1|Name=NO10G00200.1|organism=Nannochloropsis oceanica|type=CDS|length=1530bp|location=Sequence derived from alignment at chr10:65613..71810+ (Nannochloropsis oceanica)
ATGGAAATTTCCATGCCCACCACACCCTCTTTTCCTTTTCCCTTTCTCTC
TTCAGGCTTGTCTACCCACGTAGACGCATACCTACCGAATATGGCTGCTG
ACAAAACGAATGGGGAGTGGATCGACGTGAGCGGGGACGGAGGATTGCTG
AAAAAGATCTTGAAGGAAGGCGAAGGCGAGTCGCCGCCGCAGGGGAATGA
AGTGGTGGCACACTACACGGGCACGCTCGAAAGCGACGGCTCGGAGTTCG
ACTCCTCCCGGAAGCGCAATCAGCCATTTAAGTTCACGATCGGGCAGCAG
CAAGTGATCAAAGGATGGGATGTCGGCTTTGCCACCATGAAGGTTGGCGA
ACACGCCATCCTCAAGTGCCGCCACGACTACGGTTACGGGGAGAGCGGGA
GCCCTCCCTCCATCCCTCCTAAGGCCACGTTATGCTTCGACGTGGAGCTT
TTATCATTTGCGCCCAAGAAGAAGGAGAAATGGGAGATGTCCAGCGAGGA
ACGGGTGGCGGAGGCCGTCAAGCTCAAGGAGGTCGCCAGGGGGCTCTTCA
AGGAGCAGCGATGGGGCGAGGCCGCCTCCGAGTACATCGAAGCGGGGTCA
TATGTCGATGGGTTGAATGAGGAAGACGATGCCAGCACCATGGATGCAGC
TGCTGCCTTGAGTGTGACGCTGCACAGCAACGCCGCCCTGGCGTTCCTCA
AGGCGGAGATGTGGCCCGAGGCCGCGCAAGAAGCGAGTGCGGCACTTAAG
AAGGAGGCAGGCAGTGCCAAGGCTCTGTACCGACGAGGCGTGGCCCGGAT
GCACCTGGGATTGCTGGAGGAAGCACGAGAGGATTTGCTGTCCGCAGCCA
AAGCGGATCCTCAGAACAAAGACATTCGGGTGCAGCTCCAGGCGGTGAAG
GACAAATTGAAGTCGATGGCGGCGAAGGAGAAGGCTACGTTTGGCGGGTT
TTTGAACAAGCTCTCTATGTACGACGACAAGGAGGGCATCCTTGCTCACG
AGGGGCCTAATCCCAAGGTCTTCATGGACGTGACGATCGGAGGGGAGAAG
GCGGGAAGGATCACAATGGAGCTCTTCGCGGACTCTGTGCCCAGGACGGC
GGAGAACTTCCGCTGCCTCTGCACGGGCGAGAAAGGTCAGAGCAAGACCA
CGGGCAACCTCCTCTCCTACAAGGGCTCGGGCTTCCATCGCGTCATCAAG
GACTTCATGATCCAGGGGGGCGATTTCACCCACGGCGATGGCACGGGCGG
GGAGTCGATCTACGGGGAGAAATTCAAAGATGAGAATTTCAAAAGGTCGC
ACACGGAGCCCGGCCTCCTCTCCATGGCCAACGCTGGGCCCAACACGAAC
GGCTCGCAGTTTTTCATCACCACCAAAGACACCCCCCACCTGGACGGCCG
GCACGTGGTCTTCGGGAAGGTCACGGACGGAATGGAGTTGGTGCACCGCA
TCGAAGATTTGCCCAAAGACGAGAAAGACAAGCCCTTGGAGGCCGTGGTG
ATTGAGGCATGCGGGGAGATCAAGGAGTAG

Synonyms

Publications