NO09G04020.1, NO09G04020.1 (mRNA) Nannochloropsis oceanica

Overview
NameNO09G04020.1
Unique NameNO09G04020.1
TypemRNA
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1869
Alignment locationchr9:1181227..1183095 +

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Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr9genomechr9:1181227..1183095 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. oceanica IMET12017-10-24
Homology annotation for N. oceanica IMET12017-10-25
InterPro analysis for N. oceanica IMET12017-10-25
Annotated Terms
Homology
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BLAST of NO09G04020.1 vs.
Match: WP_011395041.1 (wax ester/triacylglycerol synthase family O-acyltransferase [Hahella chejuensis]; ABC27966.1 Non-ribosomal peptide synthetase modules and related protein [Hahella chejuensis KCTC 2396])

HSP 1 Score: 81.3 bits (199), Expect = 1.200e-11
Identity = 50/163 (30.67%), Postives = 83/163 (50.92%), Query Frame = 0 
Query:  447 PMSTRTNLASLQDLDNQLTVLSIPLPTGLASRRRRLAHIHHFTARLKNSTFP-LGMALLSRIATSCLPARLLEMQNDFLCEKASGVLTNVPGPVHFRQMGGAEIEEIAVFVPAVSSVGMTLATFTYGQMLSLGLVLDQAVPCAAEEVLDAFMHELDAYEAMVG 609
            P+ TR     LQ+L NQ   + +PL  G+ +   RL  I H  A LK S  P L  ALL+  A    P  + +   +    K S VL+NVPG    R + G++++E+  +VP    +G+ ++  +Y Q + +G+  D+A+     E+  A +  L+ Y ++ G
Sbjct:  310 PLETRLGREQLQELGNQFGTVFVPLAAGIGNPIERLYKIKHDMAALKESMQPSLSHALLT--AMGLFPQGVQQPLLELFSNKTSMVLSNVPGARRARYLAGSKVKELMFWVPQTGDIGLGVSLLSYNQSVQIGINADRALLPEPAELTRAMIDALEEYRSLTG 470
The following BLAST results are available for this feature:
BLAST of NO09G04020.1 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 1
Match NameE-valueIdentityDescription
WP_011395041.11.200e-1130.67wax ester/triacylglycerol synthase family O-acyltr... [more]
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
NO09G04020NO09G04020Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
NO09G04020.1NO09G04020.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
NO09G04020.1.cds1NO09G04020.1.cds1Nannochloropsis oceanica (N. oceanica IMET1)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>NO09G04020.1 ID=NO09G04020.1|Name=NO09G04020.1|organism=Nannochloropsis oceanica|type=mRNA|length=1869bp
ATGGATACTCCTGCCGCTACCTCCTTGCCCTCCTTCCTTTCCTACCTCCG
CATGGCCTGGATTGTCATAGCTGTGGCTCTCATCTTCATTCTCGCATACC
TCTGGAGCCTCAACCTTTGTGCCCGCCTTTGCTCAAACTATATCCCTGGC
GAAGAGGCCGGCCATCTCCTGAGCAGCGATGGCGCCAACATTCCCATAAT
TCACGCCTTCCTCGTCGTCAAGGGCCACATCACAGCTGCAGATATGGCGC
AGGTTCTCAACCAGGCAGGCATTCCCGAAAAGCGGTTCCAGCGCCTTAAG
CACTGTATTTCGGCGGAGCCCGGTCATCTCAAGCCTTTCGACCGAAAGCG
CGGTGATTGGCCCGTCTACTGGTACCCAGAGCCATCCTTTCGTCCCGAAA
ACCACGTTCGGAATTTACCAGACGGCCTTTCACGGGTGGAACTCAAAAAC
TACTTGAGCAGCATTGTAAATACGCCTCCATCATTTTCCGTCAGTCCATG
GGAAATCCTGGTGGCAAATGCCTTGGACGGTAACGACGAACGAACGGCCT
TGGTGTTGCGACTGCACCATGTGCTCGGCGACGGTCTAAGCGTGCTGAGG
CTTCTCGAGGCCATAAGTGAGCCGGTGCAGGGGGAGCAAGAAACAGAGGA
AGAAGGAAAAAGAGGAAACAGGAAAGATAGCATGCTGGCAGCGGCTCTAA
AGGTAGGCGTGAAGCATCGCCATCATCATCGCCCTCACGAGAAGCGGCAC
CACCACCCCTCGCACCACGATAGCCACAACGAGGCGACTGACCCCACCAC
ACCTCCTCGGGGCCCTGGTCCTGCTGGTCCACTGCGCCGTTTTTCCCCAT
TTCCCCTCGTCCGTTCTCTCCTCTTCTATGCTCGCATGTCCATCGAGCTG
CCCTATGTGGTCTACCTTGAGTTCCTTGCCCCCCGTCCCGAGCAGAACCT
GTTCAAGCCCCGGCCGCTGACGGGCCACAAAAACATCGCCTGGCGGGTGG
GGCATGCTGATGTGGCACGGGTGAAGCGGATTAAGGATGCCTTAGGGGCC
AAGCTGAACGATGTCCTCTTGGCCTGTGTCACGGGAGCCTTGCGGACGAT
TATGCTGGCGCATGGCGGTGGGGAAAAGAAGGATGAAGGGAGGAGCAGCG
GCGGGGGGACTATAGAGGCAAAATCAACGGAGAAGTGTGAAGAGGAAATA
ATAGAGCAGCATGGGCAGCAGGACCAGCAGCATGCAACTAGCCCCTCTTC
CTCAGTTTCCTCCTCCTTCTCTTCCACTCCCACCCTCCATTCCTGCTCCC
TCGCCCGTCCTGTGGCCGACACGACCCGATTCTTCGCCCCCATGTCTACC
CGCACCAATCTGGCCTCCCTCCAGGATCTCGACAACCAGCTCACCGTCCT
ATCTATTCCCCTCCCCACGGGCCTGGCCTCCCGCCGTCGCCGCCTCGCTC
ACATTCACCACTTCACTGCGCGCCTCAAGAACTCCACCTTTCCTCTGGGC
ATGGCCTTGCTCTCGCGCATCGCTACTTCTTGTCTTCCAGCCCGCCTGCT
GGAAATGCAGAACGATTTCCTGTGCGAAAAAGCGAGCGGTGTGCTCACGA
ATGTGCCCGGCCCTGTGCACTTCCGGCAGATGGGCGGCGCTGAGATCGAG
GAGATCGCGGTATTCGTACCTGCTGTTTCTTCGGTCGGCATGACCCTCGC
CACCTTCACCTACGGGCAGATGCTCAGCCTGGGGCTGGTGCTGGACCAGG
CCGTGCCGTGCGCTGCGGAGGAGGTGCTGGATGCCTTCATGCATGAGCTG
GACGCGTACGAGGCGATGGTAGGGGAAGGAGGGAGTGCCAAACGAGAAGG
AAAAGAGGGAGAGAGGTAA
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protein sequence of NO09G04020.1

>NO09G04020.1-protein ID=NO09G04020.1-protein|Name=NO09G04020.1|organism=Nannochloropsis oceanica|type=polypeptide|length=623bp
MDTPAATSLPSFLSYLRMAWIVIAVALIFILAYLWSLNLCARLCSNYIPG
EEAGHLLSSDGANIPIIHAFLVVKGHITAADMAQVLNQAGIPEKRFQRLK
HCISAEPGHLKPFDRKRGDWPVYWYPEPSFRPENHVRNLPDGLSRVELKN
YLSSIVNTPPSFSVSPWEILVANALDGNDERTALVLRLHHVLGDGLSVLR
LLEAISEPVQGEQETEEEGKRGNRKDSMLAAALKVGVKHRHHHRPHEKRH
HHPSHHDSHNEATDPTTPPRGPGPAGPLRRFSPFPLVRSLLFYARMSIEL
PYVVYLEFLAPRPEQNLFKPRPLTGHKNIAWRVGHADVARVKRIKDALGA
KLNDVLLACVTGALRTIMLAHGGGEKKDEGRSSGGGTIEAKSTEKCEEEI
IEQHGQQDQQHATSPSSSVSSSFSSTPTLHSCSLARPVADTTRFFAPMST
RTNLASLQDLDNQLTVLSIPLPTGLASRRRRLAHIHHFTARLKNSTFPLG
MALLSRIATSCLPARLLEMQNDFLCEKASGVLTNVPGPVHFRQMGGAEIE
EIAVFVPAVSSVGMTLATFTYGQMLSLGLVLDQAVPCAAEEVLDAFMHEL
DAYEAMVGEGGSAKREGKEGER*
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mRNA from alignment at chr9:1181227..1183095+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>NO09G04020.1 ID=NO09G04020.1|Name=NO09G04020.1|organism=Nannochloropsis oceanica|type=mRNA|length=1869bp|location=Sequence derived from alignment at chr9:1181227..1183095+ (Nannochloropsis oceanica)
ATGGATACTCCTGCCGCTACCTCCTTGCCCTCCTTCCTTTCCTACCTCCG
CATGGCCTGGATTGTCATAGCTGTGGCTCTCATCTTCATTCTCGCATACC
TCTGGAGCCTCAACCTTTGTGCCCGCCTTTGCTCAAACTATATCCCTGGC
GAAGAGGCCGGCCATCTCCTGAGCAGCGATGGCGCCAACATTCCCATAAT
TCACGCCTTCCTCGTCGTCAAGGGCCACATCACAGCTGCAGATATGGCGC
AGGTTCTCAACCAGGCAGGCATTCCCGAAAAGCGGTTCCAGCGCCTTAAG
CACTGTATTTCGGCGGAGCCCGGTCATCTCAAGCCTTTCGACCGAAAGCG
CGGTGATTGGCCCGTCTACTGGTACCCAGAGCCATCCTTTCGTCCCGAAA
ACCACGTTCGGAATTTACCAGACGGCCTTTCACGGGTGGAACTCAAAAAC
TACTTGAGCAGCATTGTAAATACGCCTCCATCATTTTCCGTCAGTCCATG
GGAAATCCTGGTGGCAAATGCCTTGGACGGTAACGACGAACGAACGGCCT
TGGTGTTGCGACTGCACCATGTGCTCGGCGACGGTCTAAGCGTGCTGAGG
CTTCTCGAGGCCATAAGTGAGCCGGTGCAGGGGGAGCAAGAAACAGAGGA
AGAAGGAAAAAGAGGAAACAGGAAAGATAGCATGCTGGCAGCGGCTCTAA
AGGTAGGCGTGAAGCATCGCCATCATCATCGCCCTCACGAGAAGCGGCAC
CACCACCCCTCGCACCACGATAGCCACAACGAGGCGACTGACCCCACCAC
ACCTCCTCGGGGCCCTGGTCCTGCTGGTCCACTGCGCCGTTTTTCCCCAT
TTCCCCTCGTCCGTTCTCTCCTCTTCTATGCTCGCATGTCCATCGAGCTG
CCCTATGTGGTCTACCTTGAGTTCCTTGCCCCCCGTCCCGAGCAGAACCT
GTTCAAGCCCCGGCCGCTGACGGGCCACAAAAACATCGCCTGGCGGGTGG
GGCATGCTGATGTGGCACGGGTGAAGCGGATTAAGGATGCCTTAGGGGCC
AAGCTGAACGATGTCCTCTTGGCCTGTGTCACGGGAGCCTTGCGGACGAT
TATGCTGGCGCATGGCGGTGGGGAAAAGAAGGATGAAGGGAGGAGCAGCG
GCGGGGGGACTATAGAGGCAAAATCAACGGAGAAGTGTGAAGAGGAAATA
ATAGAGCAGCATGGGCAGCAGGACCAGCAGCATGCAACTAGCCCCTCTTC
CTCAGTTTCCTCCTCCTTCTCTTCCACTCCCACCCTCCATTCCTGCTCCC
TCGCCCGTCCTGTGGCCGACACGACCCGATTCTTCGCCCCCATGTCTACC
CGCACCAATCTGGCCTCCCTCCAGGATCTCGACAACCAGCTCACCGTCCT
ATCTATTCCCCTCCCCACGGGCCTGGCCTCCCGCCGTCGCCGCCTCGCTC
ACATTCACCACTTCACTGCGCGCCTCAAGAACTCCACCTTTCCTCTGGGC
ATGGCCTTGCTCTCGCGCATCGCTACTTCTTGTCTTCCAGCCCGCCTGCT
GGAAATGCAGAACGATTTCCTGTGCGAAAAAGCGAGCGGTGTGCTCACGA
ATGTGCCCGGCCCTGTGCACTTCCGGCAGATGGGCGGCGCTGAGATCGAG
GAGATCGCGGTATTCGTACCTGCTGTTTCTTCGGTCGGCATGACCCTCGC
CACCTTCACCTACGGGCAGATGCTCAGCCTGGGGCTGGTGCTGGACCAGG
CCGTGCCGTGCGCTGCGGAGGAGGTGCTGGATGCCTTCATGCATGAGCTG
GACGCGTACGAGGCGATGGTAGGGGAAGGAGGGAGTGCCAAACGAGAAGG
AAAAGAGGGAGAGAGGTAA
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Coding sequence (CDS) from alignment at chr9:1181227..1183095+

>NO09G04020.1 ID=NO09G04020.1|Name=NO09G04020.1|organism=Nannochloropsis oceanica|type=CDS|length=1869bp|location=Sequence derived from alignment at chr9:1181227..1183095+ (Nannochloropsis oceanica)
ATGGATACTCCTGCCGCTACCTCCTTGCCCTCCTTCCTTTCCTACCTCCG
CATGGCCTGGATTGTCATAGCTGTGGCTCTCATCTTCATTCTCGCATACC
TCTGGAGCCTCAACCTTTGTGCCCGCCTTTGCTCAAACTATATCCCTGGC
GAAGAGGCCGGCCATCTCCTGAGCAGCGATGGCGCCAACATTCCCATAAT
TCACGCCTTCCTCGTCGTCAAGGGCCACATCACAGCTGCAGATATGGCGC
AGGTTCTCAACCAGGCAGGCATTCCCGAAAAGCGGTTCCAGCGCCTTAAG
CACTGTATTTCGGCGGAGCCCGGTCATCTCAAGCCTTTCGACCGAAAGCG
CGGTGATTGGCCCGTCTACTGGTACCCAGAGCCATCCTTTCGTCCCGAAA
ACCACGTTCGGAATTTACCAGACGGCCTTTCACGGGTGGAACTCAAAAAC
TACTTGAGCAGCATTGTAAATACGCCTCCATCATTTTCCGTCAGTCCATG
GGAAATCCTGGTGGCAAATGCCTTGGACGGTAACGACGAACGAACGGCCT
TGGTGTTGCGACTGCACCATGTGCTCGGCGACGGTCTAAGCGTGCTGAGG
CTTCTCGAGGCCATAAGTGAGCCGGTGCAGGGGGAGCAAGAAACAGAGGA
AGAAGGAAAAAGAGGAAACAGGAAAGATAGCATGCTGGCAGCGGCTCTAA
AGGTAGGCGTGAAGCATCGCCATCATCATCGCCCTCACGAGAAGCGGCAC
CACCACCCCTCGCACCACGATAGCCACAACGAGGCGACTGACCCCACCAC
ACCTCCTCGGGGCCCTGGTCCTGCTGGTCCACTGCGCCGTTTTTCCCCAT
TTCCCCTCGTCCGTTCTCTCCTCTTCTATGCTCGCATGTCCATCGAGCTG
CCCTATGTGGTCTACCTTGAGTTCCTTGCCCCCCGTCCCGAGCAGAACCT
GTTCAAGCCCCGGCCGCTGACGGGCCACAAAAACATCGCCTGGCGGGTGG
GGCATGCTGATGTGGCACGGGTGAAGCGGATTAAGGATGCCTTAGGGGCC
AAGCTGAACGATGTCCTCTTGGCCTGTGTCACGGGAGCCTTGCGGACGAT
TATGCTGGCGCATGGCGGTGGGGAAAAGAAGGATGAAGGGAGGAGCAGCG
GCGGGGGGACTATAGAGGCAAAATCAACGGAGAAGTGTGAAGAGGAAATA
ATAGAGCAGCATGGGCAGCAGGACCAGCAGCATGCAACTAGCCCCTCTTC
CTCAGTTTCCTCCTCCTTCTCTTCCACTCCCACCCTCCATTCCTGCTCCC
TCGCCCGTCCTGTGGCCGACACGACCCGATTCTTCGCCCCCATGTCTACC
CGCACCAATCTGGCCTCCCTCCAGGATCTCGACAACCAGCTCACCGTCCT
ATCTATTCCCCTCCCCACGGGCCTGGCCTCCCGCCGTCGCCGCCTCGCTC
ACATTCACCACTTCACTGCGCGCCTCAAGAACTCCACCTTTCCTCTGGGC
ATGGCCTTGCTCTCGCGCATCGCTACTTCTTGTCTTCCAGCCCGCCTGCT
GGAAATGCAGAACGATTTCCTGTGCGAAAAAGCGAGCGGTGTGCTCACGA
ATGTGCCCGGCCCTGTGCACTTCCGGCAGATGGGCGGCGCTGAGATCGAG
GAGATCGCGGTATTCGTACCTGCTGTTTCTTCGGTCGGCATGACCCTCGC
CACCTTCACCTACGGGCAGATGCTCAGCCTGGGGCTGGTGCTGGACCAGG
CCGTGCCGTGCGCTGCGGAGGAGGTGCTGGATGCCTTCATGCATGAGCTG
GACGCGTACGAGGCGATGGTAGGGGAAGGAGGGAGTGCCAAACGAGAAGG
AAAAGAGGGAGAGAGGTAA
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Synonyms
Publications