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Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
chr9 | genome | chr9:649240..652293 - |
Analyses
This mRNA is derived from or has results from the following analyses
Homology
BLAST of NO09G02120.1 vs.
Match: EWM27575.1 (ctp synthase [Nannochloropsis gaditana]) HSP 1 Score: 897.1 bits (2317), Expect = 3.400e-257 Identity = 449/543 (82.69%), Postives = 491/543 (90.42%), Query Frame = 0
Query: 159 MSPFEHGEVFVLNDGGEVDLDLGNYERFLSLTLSKDHNITTGKVYNEVILRERRGDYLGKTVQVVPHVTDEIQNWIERVALLPVDGSEEPPDVCLVEVGGTVGDIESSVFLEALRQFQFRVGRENFCLLFVSLVPVLGSVGEQKTKPTQHGVKELRAVGLSPDVIICRSSNRVELSTREKISVFCHCPPSHVLSVHDVSNIYHVPIILAQQNLHGLLREHLRLDSCMTPEPDLDRWTELATSVDIFTEEVKIAIVGKYTGLSDSYLSVLKALKHASIAGKRALEICWVEASDLEEETEKGDREKWEAAWKVIEEVDGIVVPGGFGSRGVEGKILTVEYARKRGKPILGVCLGMQVMVIEHCRHVLGMAGVTSEEFAAKADEGGQKGQQQQQDEQQQQQQQQQQQPHAVVFMPEINQAVMGGTMRLGARPTHVTLKDAKKTLTLAGQLYKGSEEVWERHRHRYEVNPDLVGGLEEAGLRFVGKDGTGTRMEIVELDRQVHPFFFGTQYHPEFQSRPLEPSPPFFGLILAASGQLAEYLKTVGAN 702
MSPFEHGEVFVL+DGGEVDLDLGNYERFLSLTL KDHNITTGKVYNEVILRERRGDYLGKTVQVVPHVT+EIQ+WIERVA+LPVDGS+E P++CLVEVGGTVGDIESSVFLEALRQFQFRVGRENFCL+FVSLVPVLGSVGEQKTKPTQHGVKELR+VGLSPDVIICRSSNRVELSTREKISVFCHCPPSHVLSVHDVSNIYHVPIILA+QNLHG+LR+HL+L+ MTPEPDL RWTELATSVDIF E+VKIAIVGKYTGLSDSYLSVLKALKHASIA KRALEICWVEASDLE ET+K + EK AAWKVIEEVDGIVVPGGFGSRGVEGK+LTVEYAR+ GKPILGVCLGMQVMVIEHCR+VLG+ TS+EFA +Q + + ++ ++++ +AVVFMPEI+ AVMGGTMRLGARPT V L+D ++ TLAGQLYK +EVWERHRHRYEVNP+L+G LEEAGL FVG+D TG RMEIVELDR+ HPFF GTQYHPEFQSRPLEPSPPF GLILAASGQL EYL+T GAN
Sbjct: 1 MSPFEHGEVFVLDDGGEVDLDLGNYERFLSLTLGKDHNITTGKVYNEVILRERRGDYLGKTVQVVPHVTNEIQDWIERVAVLPVDGSQEAPEICLVEVGGTVGDIESSVFLEALRQFQFRVGRENFCLIFVSLVPVLGSVGEQKTKPTQHGVKELRSVGLSPDVIICRSSNRVELSTREKISVFCHCPPSHVLSVHDVSNIYHVPIILAEQNLHGILRDHLKLERIMTPEPDLVRWTELATSVDIFEEQVKIAIVGKYTGLSDSYLSVLKALKHASIAAKRALEICWVEASDLEPETQKTEEEKHAAAWKVIEEVDGIVVPGGFGSRGVEGKVLTVEYARRTGKPILGVCLGMQVMVIEHCRNVLGLRTATSQEFA----------EQDKDQAEGAKKGDREEETYAVVFMPEIDPAVMGGTMRLGARPTDVLLRDRQQKPTLAGQLYKQRDEVWERHRHRYEVNPELLGRLEEAGLHFVGRDKTGARMEIVELDREKHPFFLGTQYHPEFQSRPLEPSPPFLGLILAASGQLREYLRTNGAN 533
The following BLAST results are available for this feature:
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >NO09G02120.1 ID=NO09G02120.1|Name=NO09G02120.1|organism=Nannochloropsis oceanica|type=mRNA|length=2737bp GCCTGTGCGCGCGAAGTAGCAACAAGCGCGTCGCGAGAATGGCGGGATGG CGGGCTACGAAAAGAATACATTTACCCTGTGTGATAGACCCGCTGCATCG CGCCGCAGGCTGGGCACTTGGACGACGTCTTTATCGCCTGGTTTATCGTG GCATGGGGCTGCGTGTTGTAAAAGTGCTCGCTCCCAGACCACAAAGTCCC AAGAAAGCTCTGCCATCCAGCTTCCACCTACCAGACCCGCCATCTCACCT TGCATCCTCCCTCCATCCCACATAACACAGCTCACACCAAGAGCTATGGA CGCCGACCGTAGTAGCAGCAGCACTAGCGGCAGCAATGGCGGCGCCAGTG CCGGTGCCAGTGAGAAGAAGAAAATGAAATATGTCTGTGTGACGGGCGGC GTGGTGAGCGGCTTGGGCAAAGGCATCACTATTTCCTCCATCGGCCGCCT CCTCAAGCAAAGCGGCCTCCGGGTCACGTCCATTAAAATCGACCCCTACC TCAACACGGACGCTGGGACCATGTCCCCCTTCGAGCATGGGGAGGTCTTC GTCCTGAATGACGGAGGAGAGGTGGACCTTGATTTGGGGAATTACGAGCG TTTTCTGTCTCTTACTCTCAGCAAGGACCACAACATCACGACGGGCAAGG TGTATAATGAAGTGATCCTGCGTGAGCGGCGTGGGGATTACCTGGGGAAG ACTGTCCAGGTGGTGCCACATGTGACTGATGAGATTCAAAACTGGATCGA GCGCGTGGCTCTCCTGCCGGTGGACGGGAGTGAGGAGCCCCCAGATGTGT GCTTGGTTGAGGTGGGAGGAACGGTGGGTGACATTGAGAGCAGCGTGTTT CTCGAAGCCTTGCGTCAATTTCAATTTCGGGTGGGACGGGAAAATTTCTG TTTGTTATTTGTATCGTTGGTGCCTGTACTGGGCTCGGTGGGGGAGCAGA AGACGAAGCCGACGCAGCATGGAGTGAAGGAGTTGAGGGCCGTTGGGTTG AGCCCGGACGTGATCATTTGCCGATCATCGAACCGCGTGGAGCTCTCGAC AAGAGAGAAAATTTCCGTGTTTTGCCATTGCCCCCCGTCCCATGTGCTTT CGGTGCACGACGTAAGCAACATTTACCACGTGCCTATCATCTTGGCGCAA CAAAACCTGCACGGCCTTTTGCGGGAGCACCTCCGGCTCGACAGCTGCAT GACCCCAGAGCCGGACCTGGACCGGTGGACCGAGCTGGCGACGAGCGTGG ATATTTTCACGGAGGAGGTTAAAATTGCGATAGTGGGGAAATACACCGGC TTGTCGGACTCGTACCTGAGCGTGTTGAAGGCCTTGAAGCATGCGTCTAT CGCGGGGAAAAGGGCGTTAGAGATCTGTTGGGTGGAGGCCAGTGACTTGG AGGAGGAGACTGAGAAGGGGGATAGGGAGAAGTGGGAGGCGGCGTGGAAG GTGATCGAGGAGGTGGATGGGATCGTGGTCCCCGGGGGTTTCGGATCCAG GGGAGTCGAGGGGAAGATCTTGACGGTGGAGTATGCGAGAAAGAGGGGAA AGCCCATCCTGGGGGTCTGTCTGGGCATGCAAGTGATGGTGATTGAGCAC TGTCGACATGTGTTGGGCATGGCGGGAGTGACCAGCGAAGAGTTTGCGGC GAAAGCCGATGAGGGGGGGCAGAAGGGGCAGCAGCAGCAGCAGGACGAGC AGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCCGCATGCTGTGGTTTTC ATGCCGGAGATCAATCAGGCGGTGATGGGAGGGACGATGAGGCTGGGCGC AAGGCCGACGCATGTCACGTTGAAGGATGCGAAGAAAACGCTGACCTTGG CGGGACAGTTGTACAAAGGCAGTGAGGAGGTCTGGGAAAGGCATCGGCAC CGGTATGAGGTTAATCCGGACCTGGTCGGAGGCTTGGAGGAGGCGGGGCT ACGCTTTGTGGGCAAGGACGGGACAGGCACGAGGATGGAGATTGTCGAGC TGGATCGTCAGGTGCATCCCTTTTTTTTCGGCACCCAGTACCATCCGGAA TTTCAGTCGAGGCCCTTGGAACCGTCCCCGCCGTTCTTCGGCTTGATTTT AGCGGCGTCGGGGCAATTGGCTGAATATTTGAAGACGGTAGGTGCGAACT AGGGATGAAATCAGCGGGGGTGTCGAGGAATGGCCACGCTCTGGTAGAGC TGTGTAGGAGGAAGCCGGCGAGAAAACAGCGGCAATGGTGCAGGTACAGT TAACAAGAGGGTGCGAGGCGGGGAGGGAGGGAGGAAGGGAGGAAGAAGAG GAGGAAAGCACCCGAACAGGCTGGGTGCAAGGGATCGAGAGTAGATAATT GGGAGAGAGAGAGATAAGATGATGACGACAACAAAAAGTATTTCCACTTT TGTCTTGACGCGGTAATACTGCGTGTGGGTGTGGACGTGTTAGGGGGAGA AAGTAAATCAGCGAAGGAAGAAAGAGCAGGTGGGTGATGAGCAACCCAAC TCAACTCGCACATTTTCTCCCTCTGGGGTTGGAGGAGTCAAGAAGAAGAG TGACGATGGTGATGCCACATCAGCAACAGCAGCAGCAGCAACAGCAGCAG CAACAGCAGCAGCAGCAGCAGCGGTAAAAAATGCAAGAGAATATAAAATA CGATCCCGACAGGGAGGCAGTAGCTGTGTGTAAAGAAGGGACAGAAAGGA AATACAGAACAAGAACTCAAATAGATGAACATGAAGC back to topprotein sequence of NO09G02120.1 >NO09G02120.1-protein ID=NO09G02120.1-protein|Name=NO09G02120.1|organism=Nannochloropsis oceanica|type=polypeptide|length=702bp MAGYEKNTFTLCDRPAASRRRLGTWTTSLSPGLSWHGAACCKSARSQTTK SQESSAIQLPPTRPAISPCILPPSHITQLTPRAMDADRSSSSTSGSNGGA SAGASEKKKMKYVCVTGGVVSGLGKGITISSIGRLLKQSGLRVTSIKIDP YLNTDAGTMSPFEHGEVFVLNDGGEVDLDLGNYERFLSLTLSKDHNITTG KVYNEVILRERRGDYLGKTVQVVPHVTDEIQNWIERVALLPVDGSEEPPD VCLVEVGGTVGDIESSVFLEALRQFQFRVGRENFCLLFVSLVPVLGSVGE QKTKPTQHGVKELRAVGLSPDVIICRSSNRVELSTREKISVFCHCPPSHV LSVHDVSNIYHVPIILAQQNLHGLLREHLRLDSCMTPEPDLDRWTELATS VDIFTEEVKIAIVGKYTGLSDSYLSVLKALKHASIAGKRALEICWVEASD LEEETEKGDREKWEAAWKVIEEVDGIVVPGGFGSRGVEGKILTVEYARKR GKPILGVCLGMQVMVIEHCRHVLGMAGVTSEEFAAKADEGGQKGQQQQQD EQQQQQQQQQQQPHAVVFMPEINQAVMGGTMRLGARPTHVTLKDAKKTLT LAGQLYKGSEEVWERHRHRYEVNPDLVGGLEEAGLRFVGKDGTGTRMEIV ELDRQVHPFFFGTQYHPEFQSRPLEPSPPFFGLILAASGQLAEYLKTVGA N* back to topmRNA from alignment at chr9:649240..652293- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >NO09G02120.1 ID=NO09G02120.1|Name=NO09G02120.1|organism=Nannochloropsis oceanica|type=mRNA|length=3054bp|location=Sequence derived from alignment at chr9:649240..652293- (Nannochloropsis oceanica) GCCTGTGCGCGCGAAGTAGCAACAAGCGCGTCGCGAGAATGGCGGGATGG
CGGGCTACGAAAAGAATACATTTACCCTGTGTGATAGACCCGCTGCATCG
CGCCGCAGGCTGGGCACTTGGACGACGTCTTTATCGCCTGGTTTATCGTG
GCATGGGGCTGCGTGTTGTAAAAGTGCTCGCTCCCAGACCACAAAGTCCC
AAGAAAGCTCTGCCATCCAGCTTCCACCTACCAGACCCGCCATCTCACCT
TGCATCCTCCCTCCATCCCACATAACACAGCTCACACCAAGAGCTATGGA
CGCCGACCGTAGTAGCAGCAGCACTAGCGGCAGCAATGGCGGCGCCAGTG
CCGGTGCCAGTGAGAAGAAGAAAATGAAATATGTCTGTGTGACGGGCGGC
GTGGTGAGCGGCTTGGGCAAAGGTAAGAGACGGAGAAACGTACCGACGTG
CGGCAACCTCTTTATGCCCGGCCCCTTCCTTCCCCCGATGACATGCATTT
CTCAACGTGACAAGAGTCAGTGCCAAGATGTAGTAGAATGAAATGTGGAC
GGCAAAGCTTGCAAGTATTCCTGGCCTGTGCTATCCATCCCTCCTTCCTT
TGCCTCCATCATCCCTACACATCCAACGCCTTGGGATGCGACTATCAGAC
TCCTTCTACATCCTATGACATGCCCTTGTCTACGTCCGTGTTCATCATAC
CCTTCCCTCCTCCTCCACTCCCTCTTTCTCTCCTTCCAGGCATCACTATT
TCCTCCATCGGCCGCCTCCTCAAGCAAAGCGGCCTCCGGGTCACGTCCAT
TAAAATCGACCCCTACCTCAACACGGACGCTGGGACCATGTCCCCCTTCG
AGCATGGGGAGGTCTTCGTCCTGAATGACGGAGGAGAGGTGGACCTTGAT
TTGGGGAATTACGAGCGTTTTCTGTCTCTTACTCTCAGCAAGGACCACAA
CATCACGACGGGCAAGGTGTATAATGAAGTGATCCTGCGTGAGCGGCGTG
GGGATTACCTGGGGAAGACTGTCCAGGTGGTGCCACATGTGACTGATGAG
ATTCAAAACTGGATCGAGCGCGTGGCTCTCCTGCCGGTGGACGGGAGTGA
GGAGCCCCCAGATGTGTGCTTGGTTGAGGTGGGAGGAACGGTGGGTGACA
TTGAGAGCAGCGTGTTTCTCGAAGCCTTGCGTCAATTTCAATTTCGGGTG
GGACGGGAAAATTTCTGTTTGTTATTTGTATCGTTGGTGCCTGTACTGGG
CTCGGTGGGGGAGCAGAAGACGAAGCCGACGCAGCATGGAGTGAAGGAGT
TGAGGGCCGTTGGGTTGAGCCCGGACGTGATCATTTGCCGATCATCGAAC
CGCGTGGAGCTCTCGACAAGAGAGAAAATTTCCGTGTTTTGCCATTGCCC
CCCGTCCCATGTGCTTTCGGTGCACGACGTAAGCAACATTTACCACGTGC
CTATCATCTTGGCGCAACAAAACCTGCACGGCCTTTTGCGGGAGCACCTC
CGGCTCGACAGCTGCATGACCCCAGAGCCGGACCTGGACCGGTGGACCGA
GCTGGCGACGAGCGTGGATATTTTCACGGAGGAGGTTAAAATTGCGATAG
TGGGGAAATACACCGGCTTGTCGGACTCGTACCTGAGCGTGTTGAAGGCC
TTGAAGCATGCGTCTATCGCGGGGAAAAGGGCGTTAGAGATCTGTTGGGT
GGAGGCCAGTGACTTGGAGGAGGAGACTGAGAAGGGGGATAGGGAGAAGT
GGGAGGCGGCGTGGAAGGTGATCGAGGAGGTGGATGGGATCGTGGTCCCC
GGGGGTTTCGGATCCAGGGGAGTCGAGGGGAAGATCTTGACGGTGGAGTA
TGCGAGAAAGAGGGGAAAGCCCATCCTGGGGGTCTGTCTGGGCATGCAAG
TGATGGTGATTGAGCACTGTCGACATGTGTTGGGCATGGCGGGAGTGACC
AGCGAAGAGTTTGCGGCGAAAGCCGATGAGGGGGGGCAGAAGGGGCAGCA
GCAGCAGCAGGACGAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGC
CGCATGCTGTGGTTTTCATGCCGGAGATCAATCAGGCGGTGATGGGAGGG
ACGATGAGGCTGGGCGCAAGGCCGACGCATGTCACGTTGAAGGATGCGAA
GAAAACGCTGACCTTGGCGGGACAGTTGTACAAAGGCAGTGAGGAGGTCT
GGGAAAGGCATCGGCACCGGTATGAGGTTAATCCGGACCTGGTCGGAGGC
TTGGAGGAGGCGGGGCTACGCTTTGTGGGCAAGGACGGGACAGGCACGAG
GATGGAGATTGTCGAGCTGGATCGTCAGGTGCATCCCTTTTTTTTCGGCA
CCCAGTACCATCCGGAATTTCAGTCGAGGCCCTTGGAACCGTCCCCGCCG
TTCTTCGGCTTGATTTTAGCGGCGTCGGGGCAATTGGCTGAATATTTGAA
GACGGTAGGTGCGAACTAGGGATGAAATCAGCGGGGGTGTCGAGGAATGG
CCACGCTCTGGTAGAGCTGTGTAGGAGGAAGCCGGCGAGAAAACAGCGGC
AATGGTGCAGGTACAGTTAACAAGAGGGTGCGAGGCGGGGAGGGAGGGAG
GAAGGGAGGAAGAAGAGGAGGAAAGCACCCGAACAGGCTGGGTGCAAGGG
ATCGAGAGTAGATAATTGGGAGAGAGAGAGATAAGATGATGACGACAACA
AAAAGTATTTCCACTTTTGTCTTGACGCGGTAATACTGCGTGTGGGTGTG
GACGTGTTAGGGGGAGAAAGTAAATCAGCGAAGGAAGAAAGAGCAGGTGG
GTGATGAGCAACCCAACTCAACTCGCACATTTTCTCCCTCTGGGGTTGGA
GGAGTCAAGAAGAAGAGTGACGATGGTGATGCCACATCAGCAACAGCAGC
AGCAGCAACAGCAGCAGCAACAGCAGCAGCAGCAGCAGCGGTAAAAAATG
CAAGAGAATATAAAATACGATCCCGACAGGGAGGCAGTAGCTGTGTGTAA
AGAAGGGACAGAAAGGAAATACAGAACAAGAACTCAAATAGATGAACATG
AAGC back to topCoding sequence (CDS) from alignment at chr9:649240..652293- >NO09G02120.1 ID=NO09G02120.1|Name=NO09G02120.1|organism=Nannochloropsis oceanica|type=CDS|length=2106bp|location=Sequence derived from alignment at chr9:649240..652293- (Nannochloropsis oceanica) ATGGCGGGCTACGAAAAGAATACATTTACCCTGTGTGATAGACCCGCTGC ATCGCGCCGCAGGCTGGGCACTTGGACGACGTCTTTATCGCCTGGTTTAT CGTGGCATGGGGCTGCGTGTTGTAAAAGTGCTCGCTCCCAGACCACAAAG TCCCAAGAAAGCTCTGCCATCCAGCTTCCACCTACCAGACCCGCCATCTC ACCTTGCATCCTCCCTCCATCCCACATAACACAGCTCACACCAAGAGCTA TGGACGCCGACCGTAGTAGCAGCAGCACTAGCGGCAGCAATGGCGGCGCC AGTGCCGGTGCCAGTGAGAAGAAGAAAATGAAATATGTCTGTGTGACGGG CGGCGTGGTGAGCGGCTTGGGCAAAGGCATCACTATTTCCTCCATCGGCC GCCTCCTCAAGCAAAGCGGCCTCCGGGTCACGTCCATTAAAATCGACCCC TACCTCAACACGGACGCTGGGACCATGTCCCCCTTCGAGCATGGGGAGGT CTTCGTCCTGAATGACGGAGGAGAGGTGGACCTTGATTTGGGGAATTACG AGCGTTTTCTGTCTCTTACTCTCAGCAAGGACCACAACATCACGACGGGC AAGGTGTATAATGAAGTGATCCTGCGTGAGCGGCGTGGGGATTACCTGGG GAAGACTGTCCAGGTGGTGCCACATGTGACTGATGAGATTCAAAACTGGA TCGAGCGCGTGGCTCTCCTGCCGGTGGACGGGAGTGAGGAGCCCCCAGAT GTGTGCTTGGTTGAGGTGGGAGGAACGGTGGGTGACATTGAGAGCAGCGT GTTTCTCGAAGCCTTGCGTCAATTTCAATTTCGGGTGGGACGGGAAAATT TCTGTTTGTTATTTGTATCGTTGGTGCCTGTACTGGGCTCGGTGGGGGAG CAGAAGACGAAGCCGACGCAGCATGGAGTGAAGGAGTTGAGGGCCGTTGG GTTGAGCCCGGACGTGATCATTTGCCGATCATCGAACCGCGTGGAGCTCT CGACAAGAGAGAAAATTTCCGTGTTTTGCCATTGCCCCCCGTCCCATGTG CTTTCGGTGCACGACGTAAGCAACATTTACCACGTGCCTATCATCTTGGC GCAACAAAACCTGCACGGCCTTTTGCGGGAGCACCTCCGGCTCGACAGCT GCATGACCCCAGAGCCGGACCTGGACCGGTGGACCGAGCTGGCGACGAGC GTGGATATTTTCACGGAGGAGGTTAAAATTGCGATAGTGGGGAAATACAC CGGCTTGTCGGACTCGTACCTGAGCGTGTTGAAGGCCTTGAAGCATGCGT CTATCGCGGGGAAAAGGGCGTTAGAGATCTGTTGGGTGGAGGCCAGTGAC TTGGAGGAGGAGACTGAGAAGGGGGATAGGGAGAAGTGGGAGGCGGCGTG GAAGGTGATCGAGGAGGTGGATGGGATCGTGGTCCCCGGGGGTTTCGGAT CCAGGGGAGTCGAGGGGAAGATCTTGACGGTGGAGTATGCGAGAAAGAGG GGAAAGCCCATCCTGGGGGTCTGTCTGGGCATGCAAGTGATGGTGATTGA GCACTGTCGACATGTGTTGGGCATGGCGGGAGTGACCAGCGAAGAGTTTG CGGCGAAAGCCGATGAGGGGGGGCAGAAGGGGCAGCAGCAGCAGCAGGAC GAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCCGCATGCTGTGGT TTTCATGCCGGAGATCAATCAGGCGGTGATGGGAGGGACGATGAGGCTGG GCGCAAGGCCGACGCATGTCACGTTGAAGGATGCGAAGAAAACGCTGACC TTGGCGGGACAGTTGTACAAAGGCAGTGAGGAGGTCTGGGAAAGGCATCG GCACCGGTATGAGGTTAATCCGGACCTGGTCGGAGGCTTGGAGGAGGCGG GGCTACGCTTTGTGGGCAAGGACGGGACAGGCACGAGGATGGAGATTGTC GAGCTGGATCGTCAGGTGCATCCCTTTTTTTTCGGCACCCAGTACCATCC GGAATTTCAGTCGAGGCCCTTGGAACCGTCCCCGCCGTTCTTCGGCTTGA TTTTAGCGGCGTCGGGGCAATTGGCTGAATATTTGAAGACGGTAGGTGCG AACTAG back to top
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