NO09G00850.1, NO09G00850.1 (mRNA) Nannochloropsis oceanica | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	NO09G00850.1
Unique Name	NO09G00850.1
Type	mRNA
Organism	Nannochloropsis oceanica (N. oceanica IMET1)
Sequence length	3642
Alignment location	chr9:296663..300661 -

Link to JBrowse

Properties

Mutants

Expression

No biomaterial libraries express this feature.

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
chr9	genome	chr9:296663..300661 -

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Gene prediction for N. oceanica IMET1	2017-10-24
Homology annotation for N. oceanica IMET1	2017-10-25
InterPro analysis for N. oceanica IMET1	2017-10-25

Annotated Terms

Homology

[Close]

BLAST of NO09G00850.1 vs.
Match: EWM27718.1 (exo-beta- -glucanase [Nannochloropsis gaditana])

HSP 1 Score: 1090.9 bits (2820), Expect = 0.000e+0
Identity = 524/744 (70.43%), Postives = 604/744 (81.18%), Query Frame = 0

Query:   19 SIFLLALSLSRS---YSWPWSHK---PKAPQPGS--GPSITPSSVSPKTHLDGSKIMMEWRTKPAAGSLSHQSVDPSNMICSLDPKITPDSLQDFIADVGGMWGSACGRNRGVFILDPADGKTYDCGNFPDSWSVSNAGSLLSAEPEKAVAALANYISAVYNSTIVKGVAACDFNGLAYLTCGREEPWKRVPWYSKIKNPIRAVNIGGLFVLEQWILPGFVKWGEETGIWDQYSYSSKCAKMGTCDNLKKHWKEWYTAADFVQMKQFGLNTIRLPVGYWYFAEKAGLDPSPYLVPDEDIYDAQHPITKVIRWAKDAGLQVILDLHGAPLSQNGLDNSGKMSDDPDVHRWGETWLYNEAAISETVQVLEGMALYIKYLSEELRLDNIMMLELVNEPWVFLDMGMVRDFYILAISSVRAVLPQLPILLHDSFHGDMWAMMLKYFPFDNVFMDTHLYHGFNPSDIASDTYEADKLKMYVHERMACAMTSMLRYETCSAAPTITGEFSLAIDNCMDAIDRKFQNYGQCDHIALRKTDPWWKDHIRSFAHRQMDVYERELGWAFWTYKLDEHAETTAESAPLWSFRLAVKEGYIDTTYPPHACKYDPIADYQGGAST--PGDKPATDTSIDKANSVAAKPELMVVERTEVAESEPADVVLPSSRHETPETGMPS--SSSDLTGILSALAGVVAILGVIVLVTQNYASGRRPLANIITSFPAAVQNLLPHALTRGHYDAVSDPSISATAQ 751
            S+ L+A+SL      +SWPWS     PKA  P +  G  I  SSVS  T L    IMMEWR+KP  G+ +H++VDPSNMIC LDPK+T  ++ DF  ++G +WG ACGRNRGVFIL+PADGKTYDCGN P+SW + N GSLLSA+P KAV ALANYISAVYNST+VKG +ACDFN LAYLTCGREEPW+ VPWY+KIKNPIRAVNIGGLFVLEQWILPGFV WGEETGIWDQY++SS+C KMG CD LK+HW+ WY+A DF+QMK+FGLNTIRLPVGYWYFAE+ GL+P+PYLVPD+D++DA HPIT VIRWA +AGLQVILDLHGAP SQNGLDNSG+M+DDP+VH WGETWLY+E AISETVQ+L  MALYIK+LSEE  LDN+MMLELVNEPWVFLDMGMVRDFYILAISSVRAVLP +PILLHDSFHGDMWAMMLKYFPFDNV+MDTH+YHGFNPSDIASD+Y+ADK KMYVHERM+CAMTSMLRYETCSAAPTITGEFSLAIDNCM+AIDRKFQ+YGQCD IA R TDPWWKDHIRSFAHRQMDVYERELGW+FWTYKLD+HAETTAESAPLWSFRLAVKEGYIDT+YPPHAC+YDP+AD+Q  A T  P  KPA D S      V +KP+L   +  +    E AD+VL +   ETP    P   S+S   G +    GV A++G  VL+   Y  G RPL+ + T   +A+Q +LP ++ RG Y+ V D S+    Q
Sbjct:    8 SVCLVAISLIAGVTGFSWPWSSTRDPPKATPPHAQIGSIIKSSSVSHHTKLVDGTIMMEWRSKPPRGAYAHRTVDPSNMICRLDPKVTASTILDFQTEIGELWGGACGRNRGVFILEPADGKTYDCGNLPESWGIPNVGSLLSAQPAKAVTALANYISAVYNSTVVKGPSACDFNALAYLTCGREEPWRTVPWYNKIKNPIRAVNIGGLFVLEQWILPGFVTWGEETGIWDQYTFSSECKKMGICDQLKQHWETWYSADDFLQMKKFGLNTIRLPVGYWYFAERVGLNPAPYLVPDQDLFDAHHPITNVIRWADEAGLQVILDLHGAPYSQNGLDNSGRMTDDPNVHNWGETWLYDETAISETVQILSSMALYIKFLSEEQHLDNVMMLELVNEPWVFLDMGMVRDFYILAISSVRAVLPDMPILLHDSFHGDMWAMMLKYFPFDNVYMDTHIYHGFNPSDIASDSYQADKQKMYVHERMSCAMTSMLRYETCSAAPTITGEFSLAIDNCMNAIDRKFQDYGQCDRIARRSTDPWWKDHIRSFAHRQMDVYERELGWSFWTYKLDKHAETTAESAPLWSFRLAVKEGYIDTSYPPHACRYDPVADWQDKAPTAAPASKPAPD-SAPADEGVVSKPKLAREQDVKTETGEDADLVLLAPPEETPGGRAPQRMSASTYPGWVLTFIGVAALIGAGVLLAHRYTGG-RPLSVLTTQLSSAMQAVLPSSVHRGQYETVGDSSMPVGTQ 749

The following BLAST results are available for this feature:

BLAST of NO09G00850.1 vs.

BLAST of NO09G00850.1 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 1


Match Name	E-value	Identity	Description
EWM27718.1	0.000e+0	70.43	exo-beta- -glucanase [Nannochloropsis gaditana]	[more]

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
NO09G00850	NO09G00850	Nannochloropsis oceanica (N. oceanica IMET1)	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
NO09G00850.1	NO09G00850.1-protein	Nannochloropsis oceanica (N. oceanica IMET1)	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
NO09G00850.1.cds1	NO09G00850.1.cds1	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO09G00850.1.cds2	NO09G00850.1.cds2	Nannochloropsis oceanica (N. oceanica IMET1)	CDS

Sequences

The following sequences are available for this feature:

mRNA sequence
protein sequence
mRNA from alignment at chr9:296663..300661-
coding sequence from alignment at chr9:296663..300661-

mRNA sequence

>NO09G00850.1 ID=NO09G00850.1|Name=NO09G00850.1|organism=Nannochloropsis oceanica|type=mRNA|length=3642bp
CTCGGCCTGTTTCACTCACGCCGATCACAATGCGTCAGGGTGTTTCTCAT
CCCAGCGGACTCGTTCCACGCCTCAACCACCCGCCAAAAAACACTCCCAA
CTAACTGTGGTCGCAGAGTCAACCCGCAAAAAGCCAGACAAAAGCAAGCA
ACGGTGCAAATACAAAAGATACACCACACGCAAGCCACCATACAAGCCCC
TGCCACACTCGGCTGATGAAGGCGATAAACTGCGGCGCAAACGGCAACGG
CAGCCTGCAAAACAAACAACCCTGTTTTGGCCGGCGGCAACGTCCCAGAT
GAAGGGGCCACGCTAGCGTCGATAGGAGGAAATTGAGGGGATGGGGACGC
GTTTATCCATCCAAATAGGTGGTCTACACTCATTAATTCCAATTTGCACC
AATGGAAGGCCTTCTTGCCCGAGAAATCTCAATCGTTCATTCAAAAGCAA
AAAAGCATATAGTCAATCGTTAGTCTTCCTTTTCCGCATCTCCTCTTCCC
CCGACCTCGCGACCACTACAGGCTAGCACCTCCAGCAACCAGAGCCACAC
GCCCCTAGGCACGTTCCAGTCGCGCTGTGCTGCGGAAACCGGAAAATATG
GGTGCTTACAGAGCCTTCCGTTTTCTTCCTCACCAGTCCTTCCAAGTCAG
TCACAAAGACCAGTTGCCACCCATGTCTTCTTTGTCCTTAGCAGCCACGG
GCTTATCTTTTCCCCTTGTCGCCTCTGGTCATCCTCATCCATGCCACGCG
GCAACCGCATCTGGCCACGAGCTTTGGCTGGCTGTTGTTACGTTGTCGTG
CCCCTCTCCTCCCATGCATGCACTCACTTCAAACTTTTCTCCACTCTACA
CAGTTCAAGATGTTGTCTAGGTCCATCTTTTTGCTGGCACTATCTCTGAG
CAGGAGCTACTCGTGGCCCTGGTCTCACAAGCCGAAGGCTCCCCAACCAG
GAAGCGGCCCTTCCATCACGCCTTCTTCAGTGTCCCCCAAGACACATTTA
GACGGGAGCAAAATAATGATGGAGTGGCGAACTAAGCCTGCGGCCGGGTC
TCTCTCTCATCAAAGCGTTGACCCGAGTAATATGATATGTTCCTTGGATC
CCAAGATCACTCCTGATTCTCTGCAGGACTTCATCGCTGACGTCGGAGGC
ATGTGGGGCTCGGCGTGCGGCCGCAATCGCGGAGTTTTTATCCTTGATCC
GGCGGACGGAAAGACGTATGACTGCGGAAACTTTCCCGATAGCTGGTCGG
TTTCAAATGCAGGGTCTCTTCTGTCTGCAGAGCCTGAAAAAGCTGTCGCG
GCCCTAGCGAACTACATCTCGGCAGTGTACAACAGCACCATCGTCAAGGG
CGTAGCCGCCTGCGATTTTAATGGACTTGCGTACCTGACATGCGGACGGG
AGGAGCCTTGGAAGAGAGTTCCCTGGTACAGCAAGATCAAGAACCCCATC
CGGGCCGTAAACATCGGCGGCCTGTTTGTGCTGGAGCAGTGGATTTTGCC
CGGCTTCGTGAAGTGGGGCGAGGAGACTGGCATCTGGGACCAGTACTCTT
ACTCGTCCAAGTGTGCCAAGATGGGCACTTGCGACAATCTCAAGAAGCAC
TGGAAGGAGTGGTACACTGCCGCTGACTTTGTGCAAATGAAGCAGTTCGG
CCTCAACACCATCCGCTTGCCCGTGGGTTACTGGTACTTCGCCGAGAAGG
CGGGCCTGGACCCGTCCCCGTACCTTGTGCCGGACGAGGACATCTACGAC
GCGCAACACCCAATCACCAAGGTCATCCGATGGGCCAAGGATGCGGGCCT
GCAAGTCATCCTGGACCTGCACGGGGCACCGCTTAGTCAGAATGGTCTGG
ACAATTCGGGCAAAATGAGCGACGACCCAGACGTGCACAGGTGGGGCGAG
ACCTGGCTGTACAACGAGGCCGCCATCAGCGAGACGGTCCAGGTCCTGGA
GGGCATGGCATTGTATATTAAGTACCTGTCGGAGGAGCTGCGCCTGGACA
ACATCATGATGCTGGAGCTGGTGAATGAGCCGTGGGTATTTTTGGACATG
GGCATGGTCCGCGATTTCTATATCCTTGCCATCTCCTCCGTGCGCGCCGT
GCTGCCCCAGTTGCCCATCCTGCTGCACGATTCCTTCCACGGCGACATGT
GGGCGATGATGCTCAAGTACTTTCCCTTTGACAACGTCTTCATGGACACG
CACCTGTACCACGGCTTCAACCCCTCCGACATCGCCTCCGACACCTACGA
GGCCGACAAGCTCAAAATGTACGTGCATGAGCGCATGGCCTGCGCCATGA
CCTCCATGCTGCGCTACGAGACCTGCTCGGCCGCCCCCACGATTACGGGT
GAGTTCTCTCTGGCCATCGATAATTGCATGGACGCCATCGACCGCAAGTT
CCAAAACTACGGCCAGTGCGACCACATTGCTCTGCGCAAGACGGACCCCT
GGTGGAAGGACCACATTCGCTCCTTCGCGCACCGGCAGATGGATGTCTAC
GAACGCGAGTTAGGCTGGGCCTTCTGGACCTACAAGCTGGATGAGCACGC
CGAGACCACAGCCGAATCGGCACCGCTCTGGAGCTTCCGGCTGGCGGTCA
AGGAGGGCTACATTGATACCACCTACCCTCCTCACGCCTGCAAGTATGAC
CCCATTGCGGACTATCAGGGAGGAGCGTCCACGCCCGGTGATAAACCGGC
AACCGACACTTCCATTGATAAGGCTAACTCTGTGGCCGCTAAGCCCGAGT
TGATGGTTGTGGAGCGCACGGAGGTTGCGGAGTCTGAGCCCGCGGACGTT
GTGCTTCCCTCGTCCCGCCACGAAACGCCAGAGACTGGAATGCCCTCTTC
CTCATCTGACCTTACGGGCATCCTGTCGGCCTTGGCTGGCGTGGTGGCTA
TTCTGGGGGTTATCGTGCTTGTAACGCAAAACTACGCAAGCGGTCGCCGG
CCATTAGCCAATATCATCACCTCTTTTCCGGCGGCCGTGCAGAACTTGCT
GCCCCATGCTTTGACTCGGGGGCATTACGACGCGGTGTCTGATCCCAGCA
TCTCGGCCACCGCGCAAGTTTAGCGTTCTCTGGGCGAGGAGAGGTGGGTG
GAAGGATGTGATGTGGTGTGATAGGTAGCGAATAATGGTTTTGAAAATAT
GGGTTGTATGTGATTTTTATCTAATTTCGTGTGTTTCGAAAGGAGACTAG
AGGAGAGAAAAATATATTGCATATTAGAGTCAACTATCGTACATAGGCAC
GTGGACTAGCGGGCGCGTTTCCGACTGGAGAGGCCCACGGGCGCATGACG
CTGTGACTTGGGAGTGAGGGAATACTGGCGAGCGATGGATTTCCGGTCAG
AATAAAAAGAATGGATTCAATTTTGTTTTTTTGCGACGTGTAGATGAAAG
GATTGGAGGGAAGGAGGTGGAAGAGAGACACGTGGTAGGGGTAGATAACA
AGATAAGCAATACCATGATTGTTCTTGGAGAGCTACACGAGGGGGAGGGA
GCACAAGGAAAGGCAGGAGTGGTATGGTCGTGGGAGAGCCACCACCACGC
GTGGGAAAGAGGGATCAGGCGTACGGGTATGCGCCAGACAACACTCGAAG
TAAAAAATCTTCGACCGTGATAGCGGTGGGAAAACACAAGAA

protein sequence of NO09G00850.1

>NO09G00850.1-protein ID=NO09G00850.1-protein|Name=NO09G00850.1|organism=Nannochloropsis oceanica|type=polypeptide|length=752bp
MHSLQTFLHSTQFKMLSRSIFLLALSLSRSYSWPWSHKPKAPQPGSGPSI
TPSSVSPKTHLDGSKIMMEWRTKPAAGSLSHQSVDPSNMICSLDPKITPD
SLQDFIADVGGMWGSACGRNRGVFILDPADGKTYDCGNFPDSWSVSNAGS
LLSAEPEKAVAALANYISAVYNSTIVKGVAACDFNGLAYLTCGREEPWKR
VPWYSKIKNPIRAVNIGGLFVLEQWILPGFVKWGEETGIWDQYSYSSKCA
KMGTCDNLKKHWKEWYTAADFVQMKQFGLNTIRLPVGYWYFAEKAGLDPS
PYLVPDEDIYDAQHPITKVIRWAKDAGLQVILDLHGAPLSQNGLDNSGKM
SDDPDVHRWGETWLYNEAAISETVQVLEGMALYIKYLSEELRLDNIMMLE
LVNEPWVFLDMGMVRDFYILAISSVRAVLPQLPILLHDSFHGDMWAMMLK
YFPFDNVFMDTHLYHGFNPSDIASDTYEADKLKMYVHERMACAMTSMLRY
ETCSAAPTITGEFSLAIDNCMDAIDRKFQNYGQCDHIALRKTDPWWKDHI
RSFAHRQMDVYERELGWAFWTYKLDEHAETTAESAPLWSFRLAVKEGYID
TTYPPHACKYDPIADYQGGASTPGDKPATDTSIDKANSVAAKPELMVVER
TEVAESEPADVVLPSSRHETPETGMPSSSSDLTGILSALAGVVAILGVIV
LVTQNYASGRRPLANIITSFPAAVQNLLPHALTRGHYDAVSDPSISATAQ
V*

mRNA from alignment at chr9:296663..300661-

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>NO09G00850.1 ID=NO09G00850.1|Name=NO09G00850.1|organism=Nannochloropsis oceanica|type=mRNA|length=3999bp|location=Sequence derived from alignment at chr9:296663..300661- (Nannochloropsis oceanica)
CTCGGCCTGTTTCACTCACGCCGATCACAATGCGTCAGGGTGTTTCTCAT
CCCAGCGGACTCGTTCCACGCCTCAACCACCCGCCAAAAAACACTCCCAA
CTAACTGTGGTCGCAGAGTCAACCCGCAAAAAGCCAGACAAAAGCAAGCA
ACGGTGCAAATACAAAAGATACACCACACGCAAGCCACCATACAAGCCCC
TGCCACACTCGGCTGATGAAGGCGATAAACTGCGGCGCAAACGGCAACGG
CAGCCTGCAAAACAAACAACCCTGTTTTGGCCGGCGGCAACGTCCCAGAT
GAAGGGGCCACGCTAGCGTCGATAGGAGGAAATTGAGGGGATGGGGACGC
GTTTATCCATCCAAATAGGTGGTCTACACTCATTAATTCCAATTTGCACC
AATGGAAGGCCTTCTTGCCCGAGAAATCTCAATCGTTCATTCAAAAGCAA
AAAAGCATATAGTCAATCGTTAGTCTTCCTTTTCCGCATCTCCTCTTCCC
CCGACCTCGCGACCACTACAGGCTAGCACCTCCAGCAACCAGAGCCACAC
GCCCCTAGGCACGTTCCAGTCGCGCTGTGCTGCGGAAACCGGAAAATATG
GGTGCTTACAGAGCCTTCCGTTTTCTTCCTCACCAGTCCTTCCAAGTCAG
TCACAAAGACCAGTTGCCACCCATGTCTTCTTTGTCCTTAGCAGCCACGG
GCTTATCTTTTCCCCTTGTCGCCTCTGGTCATCCTCATCCATGCCACGCG
GCAACCGCATCTGGCCACGAGCTTTGGCTGGCTGTTGTTACGTTGTCGTG
CCCCTCTCCTCCCATGCATGCACTCACTTCAAACTTTTCTCCACTCTACA
CAGTTCAAGATGTTGTCTAGGTCCATCTTTTTGCTGGCACTATCTCTGAG
CAGGAGCTACTCGTGGCCCTGGTCTCACAAGCCGAAGGCTCCCCAACCAG
GAAGCGGCCCTTCCATCACGCCTTCTTCAGTGTCCCCCAAGACACATTTA
GACGGGAGCAAAATAATGATGGAGTGGCGAACTAAGCCTGCGGCCGGGTC
TCTCTCTCATCAAAGCGTTGACCCGAGTAATATGATATGTTCCTTGGATC
CCAAGATCACTCCTGATTCTCTGCAGGACTTCATCGCTGACGTCGGAGGC
ATGTGGGGCTCGGCGTGCGGCCGCAATCGCGGAGTTTTTATCCTTGATCC
GGCGGACGGAAAGACGTATGACTGCGGAAACTTTCCCGATAGCTGGTCGG
TTTCAAATGCAGGGTCTCTTCTGTCTGCAGAGCCTGAAAAAGCTGTCGCG
GCCCTAGCGAACTACATCTCGGCAGTGTACAACAGCACCATCGTCAAGGG
CGTAGCCGCCTGCGATTTTAATGGACTTGCGTACCTGACATGCGGACGGG
AGGAGCCTTGGAAGAGAGTTCCCTGGTACAGCAAGATCAAGAACCCCATC
CGGGCCGTAAACATCGGCGGCCTGTTTGTGCTGGAGCAGTGGATTTTGCC
CGGCTTCGTGAAGTGGGGCGAGGAGACTGGCATCTGGGACCAGTACTCTT
ACTCGTCCAAGTGTGCCAAGATGGGCACTTGCGACAATCTCAAGAAGCAC
TGGAAGGAGTGGTACACTGCCGCTGACTTTGTGCAAATGAAGCAGTAAGT
ATCTCTACTGGCGTATTGGTGATGGACTCCAAGAAGTGGGGTTAAGAGTG
TGACTGTTGTCGTTTCCAAACTCCGACTTACACACTACGCCAGTATGGTT
GAAAGACATGTATACCACCTTCGAAGGTTCATGCAATCGTGTGGACATGC
AACACCCTTTATTTTCGTTTCTTTTCTCTTATTCCACGGACTTCACTCTA
CGCGATGGACGTGTGTATTTCGATTGCCTCTCACACACTTACATACATAT
ATCACCCACGAGATCATACGGAGACATGCCTCGCACTCCAACCTGACCAT
TTCTCCGTCCCTCTTTCTATTCCACCAACCCACCCTCCCTCCCTCCCATA
GGTTCGGCCTCAACACCATCCGCTTGCCCGTGGGTTACTGGTACTTCGCC
GAGAAGGCGGGCCTGGACCCGTCCCCGTACCTTGTGCCGGACGAGGACAT
CTACGACGCGCAACACCCAATCACCAAGGTCATCCGATGGGCCAAGGATG
CGGGCCTGCAAGTCATCCTGGACCTGCACGGGGCACCGCTTAGTCAGAAT
GGTCTGGACAATTCGGGCAAAATGAGCGACGACCCAGACGTGCACAGGTG
GGGCGAGACCTGGCTGTACAACGAGGCCGCCATCAGCGAGACGGTCCAGG
TCCTGGAGGGCATGGCATTGTATATTAAGTACCTGTCGGAGGAGCTGCGC
CTGGACAACATCATGATGCTGGAGCTGGTGAATGAGCCGTGGGTATTTTT
GGACATGGGCATGGTCCGCGATTTCTATATCCTTGCCATCTCCTCCGTGC
GCGCCGTGCTGCCCCAGTTGCCCATCCTGCTGCACGATTCCTTCCACGGC
GACATGTGGGCGATGATGCTCAAGTACTTTCCCTTTGACAACGTCTTCAT
GGACACGCACCTGTACCACGGCTTCAACCCCTCCGACATCGCCTCCGACA
CCTACGAGGCCGACAAGCTCAAAATGTACGTGCATGAGCGCATGGCCTGC
GCCATGACCTCCATGCTGCGCTACGAGACCTGCTCGGCCGCCCCCACGAT
TACGGGTGAGTTCTCTCTGGCCATCGATAATTGCATGGACGCCATCGACC
GCAAGTTCCAAAACTACGGCCAGTGCGACCACATTGCTCTGCGCAAGACG
GACCCCTGGTGGAAGGACCACATTCGCTCCTTCGCGCACCGGCAGATGGA
TGTCTACGAACGCGAGTTAGGCTGGGCCTTCTGGACCTACAAGCTGGATG
AGCACGCCGAGACCACAGCCGAATCGGCACCGCTCTGGAGCTTCCGGCTG
GCGGTCAAGGAGGGCTACATTGATACCACCTACCCTCCTCACGCCTGCAA
GTATGACCCCATTGCGGACTATCAGGGAGGAGCGTCCACGCCCGGTGATA
AACCGGCAACCGACACTTCCATTGATAAGGCTAACTCTGTGGCCGCTAAG
CCCGAGTTGATGGTTGTGGAGCGCACGGAGGTTGCGGAGTCTGAGCCCGC
GGACGTTGTGCTTCCCTCGTCCCGCCACGAAACGCCAGAGACTGGAATGC
CCTCTTCCTCATCTGACCTTACGGGCATCCTGTCGGCCTTGGCTGGCGTG
GTGGCTATTCTGGGGGTTATCGTGCTTGTAACGCAAAACTACGCAAGCGG
TCGCCGGCCATTAGCCAATATCATCACCTCTTTTCCGGCGGCCGTGCAGA
ACTTGCTGCCCCATGCTTTGACTCGGGGGCATTACGACGCGGTGTCTGAT
CCCAGCATCTCGGCCACCGCGCAAGTTTAGCGTTCTCTGGGCGAGGAGAG
GTGGGTGGAAGGATGTGATGTGGTGTGATAGGTAGCGAATAATGGTTTTG
AAAATATGGGTTGTATGTGATTTTTATCTAATTTCGTGTGTTTCGAAAGG
AGACTAGAGGAGAGAAAAATATATTGCATATTAGAGTCAACTATCGTACA
TAGGCACGTGGACTAGCGGGCGCGTTTCCGACTGGAGAGGCCCACGGGCG
CATGACGCTGTGACTTGGGAGTGAGGGAATACTGGCGAGCGATGGATTTC
CGGTCAGAATAAAAAGAATGGATTCAATTTTGTTTTTTTGCGACGTGTAG
ATGAAAGGATTGGAGGGAAGGAGGTGGAAGAGAGACACGTGGTAGGGGTA
GATAACAAGATAAGCAATACCATGATTGTTCTTGGAGAGCTACACGAGGG
GGAGGGAGCACAAGGAAAGGCAGGAGTGGTATGGTCGTGGGAGAGCCACC
ACCACGCGTGGGAAAGAGGGATCAGGCGTACGGGTATGCGCCAGACAACA
CTCGAAGTAAAAAATCTTCGACCGTGATAGCGGTGGGAAAACACAAGAA

Coding sequence (CDS) from alignment at chr9:296663..300661-

>NO09G00850.1 ID=NO09G00850.1|Name=NO09G00850.1|organism=Nannochloropsis oceanica|type=CDS|length=2256bp|location=Sequence derived from alignment at chr9:296663..300661- (Nannochloropsis oceanica)
ATGCACTCACTTCAAACTTTTCTCCACTCTACACAGTTCAAGATGTTGTC
TAGGTCCATCTTTTTGCTGGCACTATCTCTGAGCAGGAGCTACTCGTGGC
CCTGGTCTCACAAGCCGAAGGCTCCCCAACCAGGAAGCGGCCCTTCCATC
ACGCCTTCTTCAGTGTCCCCCAAGACACATTTAGACGGGAGCAAAATAAT
GATGGAGTGGCGAACTAAGCCTGCGGCCGGGTCTCTCTCTCATCAAAGCG
TTGACCCGAGTAATATGATATGTTCCTTGGATCCCAAGATCACTCCTGAT
TCTCTGCAGGACTTCATCGCTGACGTCGGAGGCATGTGGGGCTCGGCGTG
CGGCCGCAATCGCGGAGTTTTTATCCTTGATCCGGCGGACGGAAAGACGT
ATGACTGCGGAAACTTTCCCGATAGCTGGTCGGTTTCAAATGCAGGGTCT
CTTCTGTCTGCAGAGCCTGAAAAAGCTGTCGCGGCCCTAGCGAACTACAT
CTCGGCAGTGTACAACAGCACCATCGTCAAGGGCGTAGCCGCCTGCGATT
TTAATGGACTTGCGTACCTGACATGCGGACGGGAGGAGCCTTGGAAGAGA
GTTCCCTGGTACAGCAAGATCAAGAACCCCATCCGGGCCGTAAACATCGG
CGGCCTGTTTGTGCTGGAGCAGTGGATTTTGCCCGGCTTCGTGAAGTGGG
GCGAGGAGACTGGCATCTGGGACCAGTACTCTTACTCGTCCAAGTGTGCC
AAGATGGGCACTTGCGACAATCTCAAGAAGCACTGGAAGGAGTGGTACAC
TGCCGCTGACTTTGTGCAAATGAAGCAGTTCGGCCTCAACACCATCCGCT
TGCCCGTGGGTTACTGGTACTTCGCCGAGAAGGCGGGCCTGGACCCGTCC
CCGTACCTTGTGCCGGACGAGGACATCTACGACGCGCAACACCCAATCAC
CAAGGTCATCCGATGGGCCAAGGATGCGGGCCTGCAAGTCATCCTGGACC
TGCACGGGGCACCGCTTAGTCAGAATGGTCTGGACAATTCGGGCAAAATG
AGCGACGACCCAGACGTGCACAGGTGGGGCGAGACCTGGCTGTACAACGA
GGCCGCCATCAGCGAGACGGTCCAGGTCCTGGAGGGCATGGCATTGTATA
TTAAGTACCTGTCGGAGGAGCTGCGCCTGGACAACATCATGATGCTGGAG
CTGGTGAATGAGCCGTGGGTATTTTTGGACATGGGCATGGTCCGCGATTT
CTATATCCTTGCCATCTCCTCCGTGCGCGCCGTGCTGCCCCAGTTGCCCA
TCCTGCTGCACGATTCCTTCCACGGCGACATGTGGGCGATGATGCTCAAG
TACTTTCCCTTTGACAACGTCTTCATGGACACGCACCTGTACCACGGCTT
CAACCCCTCCGACATCGCCTCCGACACCTACGAGGCCGACAAGCTCAAAA
TGTACGTGCATGAGCGCATGGCCTGCGCCATGACCTCCATGCTGCGCTAC
GAGACCTGCTCGGCCGCCCCCACGATTACGGGTGAGTTCTCTCTGGCCAT
CGATAATTGCATGGACGCCATCGACCGCAAGTTCCAAAACTACGGCCAGT
GCGACCACATTGCTCTGCGCAAGACGGACCCCTGGTGGAAGGACCACATT
CGCTCCTTCGCGCACCGGCAGATGGATGTCTACGAACGCGAGTTAGGCTG
GGCCTTCTGGACCTACAAGCTGGATGAGCACGCCGAGACCACAGCCGAAT
CGGCACCGCTCTGGAGCTTCCGGCTGGCGGTCAAGGAGGGCTACATTGAT
ACCACCTACCCTCCTCACGCCTGCAAGTATGACCCCATTGCGGACTATCA
GGGAGGAGCGTCCACGCCCGGTGATAAACCGGCAACCGACACTTCCATTG
ATAAGGCTAACTCTGTGGCCGCTAAGCCCGAGTTGATGGTTGTGGAGCGC
ACGGAGGTTGCGGAGTCTGAGCCCGCGGACGTTGTGCTTCCCTCGTCCCG
CCACGAAACGCCAGAGACTGGAATGCCCTCTTCCTCATCTGACCTTACGG
GCATCCTGTCGGCCTTGGCTGGCGTGGTGGCTATTCTGGGGGTTATCGTG
CTTGTAACGCAAAACTACGCAAGCGGTCGCCGGCCATTAGCCAATATCAT
CACCTCTTTTCCGGCGGCCGTGCAGAACTTGCTGCCCCATGCTTTGACTC
GGGGGCATTACGACGCGGTGTCTGATCCCAGCATCTCGGCCACCGCGCAA
GTTTAG

Synonyms

Publications