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Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
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| chr8 | genome | chr8:968374..971839 - |
Analyses
This mRNA is derived from or has results from the following analyses
Homology
BLAST of NO08G03480.1 vs.
Match: ATB53146.1 (diacylglycerol acyltransferase [Nannochloropsis oceanica strain IMET1]) HSP 1 Score: 964.1 bits (2491), Expect = 1.600e-277 Identity = 486/487 (99.79%), Postives = 486/487 (99.79%), Query Frame = 0
Query: 1 MAHLFRRRSKGEGNSTSSRCLSLSEGNKAMLILSSEIEPPASATSKAATSGIKEIGDPSLPTVALLSLPSISKADKNSATAAVAAGTLEDAAAGALTAPFADRSVKKQYGQDGDGAQCKEAEGGRKRSGSVGNLLLSSMTSFSKGTSLSFLTGEDKTPSPPETGPAGIDFSTPAHPTMQFVDFIITFLLVHYIQVFYSLVFLFIYLVKHGHRWPYFLAAIYAPSYFIPLQRLGGWPFKGFMRRPFWRCVQRTLALQVEREVELSPDEQYIFGWHPHGILLLSRFAIYGGLWEKLFPGIHFKTLAASPLFWIPPIREVSILLGGVDAGRASAARALTDGYSVSLYPGGSKEIYTTDPYTPETTLVLKIRKGFIRMALRYGCALVPVYTFGEKYAYHRLGQATGFARWLLAVLKVPFLIFWGRWGTFMPLKETQVSVVVGTPLRVPKIEGEPSPEVVEEWLQKYCDEVQALFRRHKHKYAKPEEFVAIS 488
MAHLFRRRSKGEGNSTSSRCLSLSEGNKAMLILSSEIEPPASATSKAATSGIKEIGDPSLPTVALLSLPSISKADKNSATAAVAAGTLEDAAAGALTAPFADRSVKKQYGQDGDGAQCKEAEGGRKRSGSVGNLLLSSMTSFSKGTSLSFLTGEDKTPSPPETGPAGIDFSTPAHPTMQFVDFIITFLLVHYIQVFYSLVFLFIYLVKHGHRWPYFLAAIYAPSYFIPLQRLGGWPFKGFMRRPFWRCVQRTLALQVEREVELSPDEQYIFGWHPHGILLLSRFAIYGGLWEKLFPGIHFKTLAASPLFWIPPIREVSILLGGVDAGRASAARALTDGYSVSLYPGGSKEIYTTDPYTPETTLVLKIRKGFIRMALRYGCALVPVYTFGEKYAYHRLGQATGFARWLLAVLKVPFLIFWGRWGTFMPLKETQVSVVVGTPLRVPKIEGEPSPEVVEEWL KYCDEVQALFRRHKHKYAKPEEFVAIS
Sbjct: 1 MAHLFRRRSKGEGNSTSSRCLSLSEGNKAMLILSSEIEPPASATSKAATSGIKEIGDPSLPTVALLSLPSISKADKNSATAAVAAGTLEDAAAGALTAPFADRSVKKQYGQDGDGAQCKEAEGGRKRSGSVGNLLLSSMTSFSKGTSLSFLTGEDKTPSPPETGPAGIDFSTPAHPTMQFVDFIITFLLVHYIQVFYSLVFLFIYLVKHGHRWPYFLAAIYAPSYFIPLQRLGGWPFKGFMRRPFWRCVQRTLALQVEREVELSPDEQYIFGWHPHGILLLSRFAIYGGLWEKLFPGIHFKTLAASPLFWIPPIREVSILLGGVDAGRASAARALTDGYSVSLYPGGSKEIYTTDPYTPETTLVLKIRKGFIRMALRYGCALVPVYTFGEKYAYHRLGQATGFARWLLAVLKVPFLIFWGRWGTFMPLKETQVSVVVGTPLRVPKIEGEPSPEVVEEWLHKYCDEVQALFRRHKHKYAKPEEFVAIS 487
The following BLAST results are available for this feature:
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >NO08G03480.1 ID=NO08G03480.1|Name=NO08G03480.1|organism=Nannochloropsis oceanica|type=mRNA|length=2019bp
ACAGGGCATCCAGGTTGACGCCAGCGGCCTGAAAACCATGGCTCACCTCT
TCCGTCGTAGAAGCAAAGGCGAGGGCAACAGCACTAGCAGCCGCTGCTTA
TCTTTATCGGAAGGCAATAAGGCCATGTTAATCCTCTCTTCCGAAATCGA
GCCGCCCGCTTCCGCCACGTCCAAAGCCGCGACAAGCGGCATCAAAGAGA
TTGGGGACCCGTCATTGCCCACCGTCGCACTATTATCACTACCTAGCATA
AGCAAGGCAGATAAAAATTCCGCCACTGCTGCAGTAGCAGCAGGAACACT
GGAGGATGCAGCAGCAGGCGCCCTGACAGCTCCATTCGCCGACCGATCTG
TGAAGAAGCAATACGGGCAGGATGGTGATGGGGCGCAGTGTAAGGAGGCA
GAAGGTGGACGAAAACGCAGTGGAAGCGTTGGTAATCTCCTACTGTCTTC
TATGACTTCGTTTTCTAAAGGCACGTCCCTTTCCTTCTTGACCGGCGAGG
ACAAGACACCGTCTCCTCCTGAGACAGGGCCTGCTGGGATTGATTTCTCG
ACACCGGCGCACCCAACGATGCAATTCGTGGACTTTATCATCACTTTTCT
CTTGGTGCACTACATTCAAGTCTTCTACTCCCTCGTGTTCCTCTTCATCT
ACCTCGTCAAGCACGGTCACCGATGGCCGTATTTCCTCGCTGCCATCTAC
GCGCCTTCCTACTTCATTCCTTTGCAGCGCTTGGGGGGATGGCCGTTCAA
AGGATTCATGCGCCGCCCCTTCTGGCGGTGTGTGCAGCGGACCCTTGCTC
TCCAGGTGGAGAGAGAGGTTGAGCTAAGCCCGGACGAACAATACATCTTT
GGTTGGCACCCCCACGGGATCTTGCTGTTGTCCCGGTTTGCCATCTATGG
GGGTCTGTGGGAGAAGCTCTTTCCGGGTATACATTTTAAGACGCTGGCTG
CAAGTCCTCTATTTTGGATTCCACCTATTCGCGAGGTGTCGATCTTGCTG
GGGGGGGTAGATGCAGGCAGGGCATCCGCAGCACGGGCGCTTACGGACGG
CTACTCCGTTTCTCTTTATCCGGGGGGAAGCAAGGAAATCTACACCACCG
ACCCCTACACTCCTGAAACGACCCTGGTCCTTAAAATCCGCAAAGGCTTC
ATTCGCATGGCCCTCCGGTATGGCTGTGCCCTTGTCCCGGTGTACACGTT
TGGAGAAAAATATGCCTATCATCGTCTAGGGCAAGCCACAGGCTTCGCGC
GCTGGCTGCTGGCGGTGCTAAAAGTGCCATTTTTGATCTTTTGGGGACGA
TGGGGAACGTTCATGCCGCTCAAGGAGACGCAGGTATCGGTGGTGGTGGG
CACGCCGTTGCGGGTGCCCAAAATCGAGGGAGAACCCTCCCCGGAGGTGG
TGGAAGAGTGGCTGCAGAAATACTGTGATGAAGTCCAAGCACTGTTCAGG
CGGCACAAGCATAAATACGCGAAGCCCGAGGAGTTCGTTGCGATCTCTTG
AATAAGAACAGAAGAGGCCCCCTTCCCCCCCTCCTCCCCTTCTCTCTTTT
CTCGTGCTCAGGCACCAGCACGCGAAACAAGAGAGAAAAGGAGCTGGCCG
CCATGTGGGTAGTTGGGATCAGGGGAGGGGTTCAGGGAGGGAAGGAGAAA
GGAAGGATTGCGTGCGTGAGTGGATCAGCATTATGGCGGGACCTTGTAAA
AGTAAGAGGATGAAGAGGATGAAGGGAGAGAGGATGGGAGGGAGAGAGGC
CGAAAGATGAGTGGATTTTATAAAAGTGTACATCAAAATTTATGTGCTCC
GTGGGAAAGCGGGAGTGAGAGGAGGAGGATGCGGAGGTGGGCGATGAGGG
GGATGCGGAGAAAGGGGAGGAGGAAAGAAAAAGAAGAAGGAGAAGAAGAC
GACAATATTTGAACGCATATATACATCCCTTCTCCGCTTCTTTACGGAAG
TTAAGCTGGCTCGACGAGCCAGCATCAGCAGGTTCGAAGACAAACACTAC
ACAGCCACACTGACGATGA back to topprotein sequence of NO08G03480.1 >NO08G03480.1-protein ID=NO08G03480.1-protein|Name=NO08G03480.1|organism=Nannochloropsis oceanica|type=polypeptide|length=488bp
MAHLFRRRSKGEGNSTSSRCLSLSEGNKAMLILSSEIEPPASATSKAATS
GIKEIGDPSLPTVALLSLPSISKADKNSATAAVAAGTLEDAAAGALTAPF
ADRSVKKQYGQDGDGAQCKEAEGGRKRSGSVGNLLLSSMTSFSKGTSLSF
LTGEDKTPSPPETGPAGIDFSTPAHPTMQFVDFIITFLLVHYIQVFYSLV
FLFIYLVKHGHRWPYFLAAIYAPSYFIPLQRLGGWPFKGFMRRPFWRCVQ
RTLALQVEREVELSPDEQYIFGWHPHGILLLSRFAIYGGLWEKLFPGIHF
KTLAASPLFWIPPIREVSILLGGVDAGRASAARALTDGYSVSLYPGGSKE
IYTTDPYTPETTLVLKIRKGFIRMALRYGCALVPVYTFGEKYAYHRLGQA
TGFARWLLAVLKVPFLIFWGRWGTFMPLKETQVSVVVGTPLRVPKIEGEP
SPEVVEEWLQKYCDEVQALFRRHKHKYAKPEEFVAIS* back to topmRNA from alignment at chr8:968374..971839- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >NO08G03480.1 ID=NO08G03480.1|Name=NO08G03480.1|organism=Nannochloropsis oceanica|type=mRNA|length=3466bp|location=Sequence derived from alignment at chr8:968374..971839- (Nannochloropsis oceanica)
ACAGGGCATCCAGGTTGACGCCAGCGGCCTGAAAACCATGGCTCACCTCT
TCCGTCGTAGAAGCAAAGGCGAGGGCAACAGCACTAGCAGCCGCTGCTTA
TCTTTATCGGAAGGCAATAAGGCCATGTTAATCCTCTCTTCCGAAATCGA
GCCGCCCGCTTCCGCCACGTCCAAAGCCGCGACAAGCGGCATCAAAGAGA
TTGGGGACCCGTCATTGCCCACCGTCGCACTATTATCACTACCTAGCATA
AGCAAGGCAGATAAAAATTCCGCCACTGCTGCAGTAGCAGCAGGAACACT
GGAGGATGCAGCAGCAGGCGCCCTGACAGCTCCATTCGCCGACCGATCTG
TGAAGAAGCAATACGGGCAGGATGGTGATGGGGCGCAGTGTAAGGAGGCA
GAAGGTGGACGAAAACGCAGTGGAAGCGTTGGTAATCTCCTACTGTCTTC
TATGACTTCGTTTTCTAAAGGCACGTCCCTTTCCTTCTTGACCGGCGAGG
ACAAGACACCGTCTCCTCCTGAGACAGGGCCTGCTGGGATTGATTTCTCG
ACACCGGCGCACCCAACGATGCAATTCGTGGACTTTATCATCACTTTTCT
CTTGGTATGTACGTTTGCTTTGAGGACGCTTCCATCACTTTTCGCTTTTG
CACCTTGTATTTAGGACACACGTCTTCATTTTCGTGGCCACTCACCCATC
CTCCCTCCCTCCCTCATATCTTCCTTACCTTCCTCGCAGGTGCACTACAT
TCAAGTCTTCTACTCCCTCGTGTTCCTCTTCATCTACCTCGTCAAGCACG
GTCACCGATGGCCGTATTTCCTCGCTGCCATCTACGCGCCTTCCTACTTC
ATTCCTTTGCAGCGCTTGGGGGGATGGCCGTTCAAAGGATTCATGCGCCG
CCCCTTCTGGCGGTGTGTGCAGCGGACCCTTGCTCTCCAGGTGGAGAGAG
AGGTTGAGCTAAGCCCGGACGAACAATACATCTTTGGTTGGCACCCGTGC
GTGTGACACTTATCCGTCCCTCCTTCCCTTCTTCCCTCCCTCCCTCCCTG
CCTGCTGGATACAAACACACTCGGATCTGTTACTATTATTTACACATCCC
TCCCTCCCTCCCTCCCTCCCTCCCTCCCTTCCTTCCTCCCTTCCTTCCTA
ACCAAGCCACGGGATCTTGCTGTTGTCCCGGTTTGCCATCTATGGGGGTC
TGTGGGAGAAGCTCTTTCCGGGTATACATTTTAAGACGCTGGCTGCAAGT
CCTCTATTTTGGATTCCACCTATTCGGTAGGTACGTCCTCCCTCTGTCCC
TCCCTCCCTGCCGTCTTGTCTCCGGCTCGTCTCAGTCCGAGGAATTCGCT
TAACCCGCCCGTCCCTTCCTCCGCCCCTTCCTCCCTCCCTCCCTCCTCGT
CCTAGCGAGGTGTCGATCTTGCTGGGGGGGGTAGATGCAGGCAGGGCATC
CGCAGCACGGGCGCTTACGGACGGCTACTCCGTTTCTCTTTATCCGGGGG
TACGTGATCACGTGTCTCTTGCGTCGGTACACACCCACCCACACCCACAC
CCACACCCACACCCACATGCACACCCACACACATATACACCCACATACAC
CCACCCACACACCCACACACCCACACCCACATACACCCACATACACCCAC
AACCACACACACACACACATCCACACACCTACCCACACACACCCACACAC
ATACACACATACACACCCACCCACATACATACATACACACACACACACAC
ACATACACACACACATATATATATATACACACACATACACACTCACCCAC
ACCCACACCCACCACACACACCCACACACCTACACACACACACACACACA
CACACACACACACACACACACACACACCTATACTCACACACCCACACACA
CCCCCCTACCCCCGCCCCCCATTCCCCCCCTGACATATGTGGATACGTTT
CTGTCTGTGCCTTTGTCTATGGGCCCCAAATGAAGCTGCCTACTACATAA
ATGCTTATGATTCCATGATTTTCCCGCTGCATACCCCCTCCCTTCCTCCC
TCCCTTCCTCCCTCCCTCCCTCGCACGCCAACAGGGAAGCAAGGAAATCT
ACACCACCGACCCCTACACTCCTGAAACGACCCTGGTCCTTAAAATCCGC
AAAGGCTTCATTCGCATGGCCCTCCGGTATGGCTGTGCCCTTGTCCCGGT
GTACACGTTTGGAGAAAAATATGCCTATCATCGTCTAGGGCAAGCCACAG
GCTTCGCGCGCTGGCTGCTGGCGGTGCTAAAAGTGCCATTTTTGATCTTT
TGGGGACGGTACGGAGGGAGGGAGGGAGGGAGGGAGGGGCAGGCTTGGGG
GCAGATATGTTTGGAGTGAAAGCGTATTATCATGTACTATGTGACTTGGT
GCCTCCCACGTACCTTTTCCCTTTGAATTAATCCTTGTCTTCTATCTTTC
CCCACTTTTTCCCCACCCTTTCCCTCCCTCCCTCCCTCCTTCCCTTACCT
TCCTTAGATGGGGAACGTTCATGCCGCTCAAGGAGACGCAGGTATCGGTG
GTGGTGGGCACGCCGTTGCGGGTGCCCAAAATCGAGGGAGAACCCTCCCC
GGAGGTGGTGGAAGAGTGGCTGCAGAAATACTGTGATGAAGTCCAAGCAC
TGTTCAGGCGGTACGTTCTTCCTCTCTCTTCTTCCCGCCCTCCCTCCTTC
CCTCCCTCTTTCCTCCCTCTTTCCTCTCTCTTTCCTTGGTGTGGTGTGGG
TGCGGGCGTGTCATCGATATCCCCTCTTTTGTCGGGCATCTCAATTGAAT
CTATTTCTTACCAACACACCTCCTTCATTTCCCCCGGCCATTCCCTCTTT
CTCCTCCTTCTTCCCCCTCTCCATTCTTTCCTCCCCTCTTTCACAACAGG
CACAAGCATAAATACGCGAAGCCCGAGGAGTTCGTTGCGATCTCTTGAAT
AAGAACAGAAGAGGCCCCCTTCCCCCCCTCCTCCCCTTCTCTCTTTTCTC
GTGCTCAGGCACCAGCACGCGAAACAAGAGAGAAAAGGAGCTGGCCGCCA
TGTGGGTAGTTGGGATCAGGGGAGGGGTTCAGGGAGGGAAGGAGAAAGGA
AGGATTGCGTGCGTGAGTGGATCAGCATTATGGCGGGACCTTGTAAAAGT
AAGAGGATGAAGAGGATGAAGGGAGAGAGGATGGGAGGGAGAGAGGCCGA
AAGATGAGTGGATTTTATAAAAGTGTACATCAAAATTTATGTGCTCCGTG
GGAAAGCGGGAGTGAGAGGAGGAGGATGCGGAGGTGGGCGATGAGGGGGA
TGCGGAGAAAGGGGAGGAGGAAAGAAAAAGAAGAAGGAGAAGAAGACGAC
AATATTTGAACGCATATATACATCCCTTCTCCGCTTCTTTACGGAAGTTA
AGCTGGCTCGACGAGCCAGCATCAGCAGGTTCGAAGACAAACACTACACA
GCCACACTGACGATGA back to topCoding sequence (CDS) from alignment at chr8:968374..971839- >NO08G03480.1 ID=NO08G03480.1|Name=NO08G03480.1|organism=Nannochloropsis oceanica|type=CDS|length=1464bp|location=Sequence derived from alignment at chr8:968374..971839- (Nannochloropsis oceanica)
ATGGCTCACCTCTTCCGTCGTAGAAGCAAAGGCGAGGGCAACAGCACTAG
CAGCCGCTGCTTATCTTTATCGGAAGGCAATAAGGCCATGTTAATCCTCT
CTTCCGAAATCGAGCCGCCCGCTTCCGCCACGTCCAAAGCCGCGACAAGC
GGCATCAAAGAGATTGGGGACCCGTCATTGCCCACCGTCGCACTATTATC
ACTACCTAGCATAAGCAAGGCAGATAAAAATTCCGCCACTGCTGCAGTAG
CAGCAGGAACACTGGAGGATGCAGCAGCAGGCGCCCTGACAGCTCCATTC
GCCGACCGATCTGTGAAGAAGCAATACGGGCAGGATGGTGATGGGGCGCA
GTGTAAGGAGGCAGAAGGTGGACGAAAACGCAGTGGAAGCGTTGGTAATC
TCCTACTGTCTTCTATGACTTCGTTTTCTAAAGGCACGTCCCTTTCCTTC
TTGACCGGCGAGGACAAGACACCGTCTCCTCCTGAGACAGGGCCTGCTGG
GATTGATTTCTCGACACCGGCGCACCCAACGATGCAATTCGTGGACTTTA
TCATCACTTTTCTCTTGGTGCACTACATTCAAGTCTTCTACTCCCTCGTG
TTCCTCTTCATCTACCTCGTCAAGCACGGTCACCGATGGCCGTATTTCCT
CGCTGCCATCTACGCGCCTTCCTACTTCATTCCTTTGCAGCGCTTGGGGG
GATGGCCGTTCAAAGGATTCATGCGCCGCCCCTTCTGGCGGTGTGTGCAG
CGGACCCTTGCTCTCCAGGTGGAGAGAGAGGTTGAGCTAAGCCCGGACGA
ACAATACATCTTTGGTTGGCACCCCCACGGGATCTTGCTGTTGTCCCGGT
TTGCCATCTATGGGGGTCTGTGGGAGAAGCTCTTTCCGGGTATACATTTT
AAGACGCTGGCTGCAAGTCCTCTATTTTGGATTCCACCTATTCGCGAGGT
GTCGATCTTGCTGGGGGGGGTAGATGCAGGCAGGGCATCCGCAGCACGGG
CGCTTACGGACGGCTACTCCGTTTCTCTTTATCCGGGGGGAAGCAAGGAA
ATCTACACCACCGACCCCTACACTCCTGAAACGACCCTGGTCCTTAAAAT
CCGCAAAGGCTTCATTCGCATGGCCCTCCGGTATGGCTGTGCCCTTGTCC
CGGTGTACACGTTTGGAGAAAAATATGCCTATCATCGTCTAGGGCAAGCC
ACAGGCTTCGCGCGCTGGCTGCTGGCGGTGCTAAAAGTGCCATTTTTGAT
CTTTTGGGGACGATGGGGAACGTTCATGCCGCTCAAGGAGACGCAGGTAT
CGGTGGTGGTGGGCACGCCGTTGCGGGTGCCCAAAATCGAGGGAGAACCC
TCCCCGGAGGTGGTGGAAGAGTGGCTGCAGAAATACTGTGATGAAGTCCA
AGCACTGTTCAGGCGGCACAAGCATAAATACGCGAAGCCCGAGGAGTTCG
TTGCGATCTCTTGA back to top
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