NO08G03050.1, NO08G03050.1 (mRNA) Nannochloropsis oceanica

Overview
NameNO08G03050.1
Unique NameNO08G03050.1
TypemRNA
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1671
Alignment locationchr8:847936..850092 +

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Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr8genomechr8:847936..850092 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. oceanica IMET12017-10-24
Homology annotation for N. oceanica IMET12017-10-25
InterPro analysis for N. oceanica IMET12017-10-25
Annotated Terms
Homology
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BLAST of NO08G03050.1 vs.
Match: EWM26700.1 (type ii inositol- -trisphosphate 5-phosphatase [Nannochloropsis gaditana])

HSP 1 Score: 300.1 bits (767), Expect = 1.500e-77
Identity = 166/313 (53.04%), Postives = 212/313 (67.73%), Query Frame = 0 
Query:   11 ANNKELWVSRVVCAVGAVAGLAIIPVALTSRRRVFQKRTDLASDDVMLLFEKLLMLKGGLDGILCLIWLTGLLVSGDS--------------------------HPFQFLLKKEDMTHTNQYFMRSVFAALVVATVVCVPIAALSEFGRSGTLCWLASVALKFFSFLSLVILMWFICLLVIFRMARVTRHRYAGRSLKVYHGSFFRRLTDGMVVHLVIIAAVVVIYGYVFRVAFRTYIWRFGRESVAFSFMEMITIAFRGPVDAIGYSPEDWLVRLNRFVCNGC--RRRNASGGLPHSKSSMAVASGPSVEPL 296
            +  +EL+ SRV+CA GA+AGLAIIPVA+T+R RVFQKR DLA++ V  LFE  L+LK  LDG LCLI L GL V GDS                          HPF F+L+K DMT T +YF RS+   ++V+T VC+P+AA  EFGRSG+LCWL SV+ +F++F +LV   W + ++VI R+ARVT+HR+A R L VYHG+FFRRL+DGMV  LV I   V++YGYVFRV  R YIWR G ES   S MEM+TIAFRGPVDAI YSP+DW+VRL RF  + C  ++R A       ++SM +AS  + EP+
Sbjct:   11 STEEELYTSRVICATGAIAGLAIIPVAITARHRVFQKRVDLANESVARLFENFLLLKAILDGCLCLILLGGLFVRGDSIGCSFLGFFFQLEEVMTLALIMRMVMHPFHFMLRKRDMTDTKEYFNRSILVCVLVSTFVCIPLAASREFGRSGSLCWLTSVSTQFYAFFTLVFFTWIVSMIVIVRLARVTQHRHAVRLLTVYHGNFFRRLSDGMVTRLVFIGVAVILYGYVFRVLARAYIWRNGAESPFLSGMEMLTIAFRGPVDAIFYSPKDWVVRLARFYRHFCLGQKRGAK-----RRTSMDLAS--AAEPV 316
The following BLAST results are available for this feature:
BLAST of NO08G03050.1 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 1
Match NameE-valueIdentityDescription
EWM26700.11.500e-7753.04type ii inositol- -trisphosphate 5-phosphatase [Na... [more]
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
NO08G03050NO08G03050Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
NO08G03050.1NO08G03050.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
NO08G03050.1.cds1NO08G03050.1.cds1Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO08G03050.1.cds2NO08G03050.1.cds2Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO08G03050.1.cds3NO08G03050.1.cds3Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO08G03050.1.cds4NO08G03050.1.cds4Nannochloropsis oceanica (N. oceanica IMET1)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>NO08G03050.1 ID=NO08G03050.1|Name=NO08G03050.1|organism=Nannochloropsis oceanica|type=mRNA|length=1671bp
ATGGAAGACAATGCAGGGGCAAGCTTAGGCGCCAACAATAAAGAGTTGTG
GGTGTCCCGCGTGGTGTGCGCTGTTGGCGCCGTGGCAGGCCTTGCCATCA
TCCCCGTGGCCCTTACTTCCCGTCGCCGTGTCTTTCAAAAGCGCACAGAC
CTTGCAAGCGATGACGTGATGTTGCTGTTTGAGAAATTACTGATGTTGAA
AGGCGGATTGGACGGGATCCTATGTCTCATTTGGCTGACCGGTCTGCTCG
TGTCGGGCGATTCGCATCCGTTTCAGTTCCTTTTGAAAAAGGAGGACATG
ACCCACACGAATCAATACTTTATGAGAAGTGTCTTCGCCGCTCTCGTGGT
AGCCACCGTCGTATGCGTTCCAATAGCGGCCTTGAGTGAATTTGGGAGAA
GTGGGACGCTGTGTTGGTTGGCCTCGGTGGCCCTGAAATTCTTTTCATTT
TTATCCCTGGTCATTTTGATGTGGTTTATCTGCCTGTTGGTCATTTTCCG
CATGGCTCGCGTCACGCGCCATCGATATGCTGGGCGCTCGCTCAAAGTCT
ACCACGGTAGTTTCTTTCGGCGCCTCACGGATGGGATGGTCGTGCACTTG
GTGATCATTGCTGCGGTGGTCGTTATCTACGGGTACGTCTTCCGCGTGGC
CTTTCGTACGTACATCTGGAGGTTTGGGAGAGAATCGGTCGCGTTTTCAT
TCATGGAAATGATTACCATAGCTTTTCGCGGGCCCGTGGACGCGATCGGC
TACTCCCCCGAGGACTGGCTTGTCCGCTTGAACCGCTTTGTGTGCAACGG
ATGTCGACGACGGAATGCATCCGGTGGTTTGCCTCACTCGAAGTCGTCCA
TGGCTGTGGCTTCCGGCCCAAGCGTCGAGCCCCTAGGGGAGGACATTTTG
GCTCACTTGGGGGGGCCTGAGAAGTACGTGATGTGTCGCCGAGCGATAGG
GTCGACAAATCGCGCGTTAGGGTACCTTGGATTTATTGCTTTGCTGGTAT
TGGCGAGAAGGGAGGAGGTACGGGCGAACCGTTTCTTGCTGCACGAGAGT
AAGACGAGCGCGCTGGCGCGTGGGAAGAATTTGGGGGTGACTGTCGCGCA
AAACAAGGGAGGCGTGGGATTGGCTTTCAGGAGAACGAATGCAGGGGAGT
TCTTGGAAGATGTAGCAGGGATTTGTAGGGTGGAAAGGGATGAGGTATGT
GGAGGGGAGAAGGAATGGAGGAGGAAGAGGTATGCAGCGTTGTTTGGGCC
GAGGGAGGGAGTGGTGGCTGGGGAGGTAAAGAAGGAGGTGGAAGTGAAGG
AAGAGGAGGACAGTGAAAGTGTGGTTCCACTTGACACCAAGCAGGTAGAG
GTGGAGGGCGGTAAGGATGGGGAAGGAGAGAATGGGAGCGGGGAAACCCA
ACGTGACGCGGAGGAGGATATGGGAGACGACGACGAGGACGACGAGGAAG
AGGAAGAGGACGAGAAGGACGACGATGAGGATGACGAAGGTGGTAGCTAC
AGCAGTCCCCGCTTCCACGGCGTGCAAGGGCTGGTGCGACAAGTCAAAAG
CTACTTGTCCGAGCCCTCCCACATCGAAATGAACAGGTTGACAATGCAGC
GATTGACATCTTCTTACGTCTGGAGAATAAAAACGGCGGGGATGCCACCG
AGGATGAGGAAGACGACCTAA
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protein sequence of NO08G03050.1

>NO08G03050.1-protein ID=NO08G03050.1-protein|Name=NO08G03050.1|organism=Nannochloropsis oceanica|type=polypeptide|length=557bp
MEDNAGASLGANNKELWVSRVVCAVGAVAGLAIIPVALTSRRRVFQKRTD
LASDDVMLLFEKLLMLKGGLDGILCLIWLTGLLVSGDSHPFQFLLKKEDM
THTNQYFMRSVFAALVVATVVCVPIAALSEFGRSGTLCWLASVALKFFSF
LSLVILMWFICLLVIFRMARVTRHRYAGRSLKVYHGSFFRRLTDGMVVHL
VIIAAVVVIYGYVFRVAFRTYIWRFGRESVAFSFMEMITIAFRGPVDAIG
YSPEDWLVRLNRFVCNGCRRRNASGGLPHSKSSMAVASGPSVEPLGEDIL
AHLGGPEKYVMCRRAIGSTNRALGYLGFIALLVLARREEVRANRFLLHES
KTSALARGKNLGVTVAQNKGGVGLAFRRTNAGEFLEDVAGICRVERDEVC
GGEKEWRRKRYAALFGPREGVVAGEVKKEVEVKEEEDSESVVPLDTKQVE
VEGGKDGEGENGSGETQRDAEEDMGDDDEDDEEEEEDEKDDDEDDEGGSY
SSPRFHGVQGLVRQVKSYLSEPSHIEMNRLTMQRLTSSYVWRIKTAGMPP
RMRKTT*
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mRNA from alignment at chr8:847936..850092+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>NO08G03050.1 ID=NO08G03050.1|Name=NO08G03050.1|organism=Nannochloropsis oceanica|type=mRNA|length=2157bp|location=Sequence derived from alignment at chr8:847936..850092+ (Nannochloropsis oceanica)
ATGGAAGACAATGCAGGGGCAAGCTTAGGCGCCAACAATAAAGAGTTGTG
GGTGTCCCGCGTGGTGTGCGCTGTTGGCGCCGTGGCAGGCCTTGCCATCA
TCCCCGTGGCCCTTACTTCCCGTCGCCGTGTCTTTCAAAAGCGCACAGAC
CTTGCAAGCGATGACGTGATGTTGCTGTTTGAGAAATTACTGATGTTGAA
AGGCGGATTGGACGGGATCCTATGTCTCATTTGGCTGACCGGTCTGCTCG
TGTCGGGCGATTCGGTAGGCTGTAAAGTCCTTGGCTTTCTGTACCAGTTT
GAAAAATATGTACGCTCGTCCTGTTGATTCGGTTCGCCCAGCATCCGTTT
CAGTTCCTTTTGAAAAAGGAGGACATGACCCACACGAATCAATACTTTAT
GAGAAGTGTCTTCGCCGCTCTCGTGGTAGCCACCGTCGTATGCGTTCCAA
TAGCGGCCTTGAGTGAATTTGGGAGAAGTGGGACGCTGTGTTGGTTGGCC
TCGGTGGCCCTGAAATTCTTTTCATTTTTATCCCTGGTCATTTTGATGTG
GTTTATCTGCCTGTTGGTCATTTTCCGCATGGCTCGCGTCACGCGCCATC
GATATGCTGGGCGCTCGCTCAAAGTCTACCACGGTAGTTTCTTTCGGCGC
CTCACGGATGGGATGGTCGTGCACTTGGTGATCATTGCTGCGGTGGTCGT
TATCTACGGGTACGTCTTCCGCGTGGCCTTTCGTACGTACATCTGGAGGT
TTGGGAGAGAATCGGTCGCGTTTTCATTCATGGAAATGATTACCATAGCT
TTTCGCGGGCCCGTGGACGCGATCGGCTACTCCCCCGAGGACTGGCTTGT
CCGCTTGAACCGCTTTGTGTGCAACGGATGTCGACGACGGAATGCATCCG
GTGGTTTGCCTCACTCGAAGTCGTCCATGGCTGTGGCTTCCGGCCCAAGC
GTCGAGCCCGTCCGTCTCAGCTTGATGGGAAAAGCGTACCCCTTCCTTTT
TTCACCGACCCCCCCGTTCCTCAGAAGGAAGACCGACACTTGTTTATTAT
TACTTACAAAATGGCTGAATGTGATAGCAAGGCTTTGGGGCCTAAGGAGT
TTGCGGGATGGATTCCACGCGATAGGGATGTGTATGTACTGGTGGTGTAG
GAGTGCATGATTTATCAGCAGCTAGGGGAGGACATTTTGGCTCACTTGGG
GGGGCCTGAGAAGTACGTGATGTGTCGCCGAGCGATAGGGTCGACAAATC
GCGCGTTAGGGTACCTTGGATTTATTGCTTTGCTGGTATTGGCGAGAAGG
GAGGAGGTACGGGCGAACCGTTTCTTGCTGCACGAGAGTAAGACGAGCGC
GCTGGCGCGTGGGAAGAATTTGGGGGTGACTGTCGCGCAAAACAAGGGAG
GCGTGGGATTGGCTTTCAGGTATTACGACACTACGTTTGCTTTGCTTGCG
TGTCATTTATCGTCGGATTTGAAGGGTCGTTCCAGGCTGAAGAGGAGGAA
TCAGGACGCGTGGCGGTTGACGTACGAGACGAATTTGTGGAGGGAAGATT
ATTTGCTCGATGTCCACCACCAGCACCACGTGTGTTTGTTTTTGGGGATT
TGAATTATCGACTAAGGAGAACGAATGCAGGGGAGTTCTTGGAAGATGTA
GCAGGGATTTGTAGGGTGGAAAGGGATGAGGTATGTGGAGGGGAGAAGGA
ATGGAGGAGGAAGAGGTATGCAGCGTTGTTTGGGCCGAGGGAGGGAGTGG
TGGCTGGGGAGGTAAAGAAGGAGGTGGAAGTGAAGGAAGAGGAGGACAGT
GAAAGTGTGGTTCCACTTGACACCAAGCAGGTAGAGGTGGAGGGCGGTAA
GGATGGGGAAGGAGAGAATGGGAGCGGGGAAACCCAACGTGACGCGGAGG
AGGATATGGGAGACGACGACGAGGACGACGAGGAAGAGGAAGAGGACGAG
AAGGACGACGATGAGGATGACGAAGGTGGTAGCTACAGCAGTCCCCGCTT
CCACGGCGTGCAAGGGCTGGTGCGACAAGTCAAAAGCTACTTGTCCGAGC
CCTCCCACATCGAAATGAACAGGTTGACAATGCAGCGATTGACATCTTCT
TACGTCTGGAGAATAAAAACGGCGGGGATGCCACCGAGGATGAGGAAGAC
GACCTAA
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Coding sequence (CDS) from alignment at chr8:847936..850092+

>NO08G03050.1 ID=NO08G03050.1|Name=NO08G03050.1|organism=Nannochloropsis oceanica|type=CDS|length=1671bp|location=Sequence derived from alignment at chr8:847936..850092+ (Nannochloropsis oceanica)
ATGGAAGACAATGCAGGGGCAAGCTTAGGCGCCAACAATAAAGAGTTGTG
GGTGTCCCGCGTGGTGTGCGCTGTTGGCGCCGTGGCAGGCCTTGCCATCA
TCCCCGTGGCCCTTACTTCCCGTCGCCGTGTCTTTCAAAAGCGCACAGAC
CTTGCAAGCGATGACGTGATGTTGCTGTTTGAGAAATTACTGATGTTGAA
AGGCGGATTGGACGGGATCCTATGTCTCATTTGGCTGACCGGTCTGCTCG
TGTCGGGCGATTCGCATCCGTTTCAGTTCCTTTTGAAAAAGGAGGACATG
ACCCACACGAATCAATACTTTATGAGAAGTGTCTTCGCCGCTCTCGTGGT
AGCCACCGTCGTATGCGTTCCAATAGCGGCCTTGAGTGAATTTGGGAGAA
GTGGGACGCTGTGTTGGTTGGCCTCGGTGGCCCTGAAATTCTTTTCATTT
TTATCCCTGGTCATTTTGATGTGGTTTATCTGCCTGTTGGTCATTTTCCG
CATGGCTCGCGTCACGCGCCATCGATATGCTGGGCGCTCGCTCAAAGTCT
ACCACGGTAGTTTCTTTCGGCGCCTCACGGATGGGATGGTCGTGCACTTG
GTGATCATTGCTGCGGTGGTCGTTATCTACGGGTACGTCTTCCGCGTGGC
CTTTCGTACGTACATCTGGAGGTTTGGGAGAGAATCGGTCGCGTTTTCAT
TCATGGAAATGATTACCATAGCTTTTCGCGGGCCCGTGGACGCGATCGGC
TACTCCCCCGAGGACTGGCTTGTCCGCTTGAACCGCTTTGTGTGCAACGG
ATGTCGACGACGGAATGCATCCGGTGGTTTGCCTCACTCGAAGTCGTCCA
TGGCTGTGGCTTCCGGCCCAAGCGTCGAGCCCCTAGGGGAGGACATTTTG
GCTCACTTGGGGGGGCCTGAGAAGTACGTGATGTGTCGCCGAGCGATAGG
GTCGACAAATCGCGCGTTAGGGTACCTTGGATTTATTGCTTTGCTGGTAT
TGGCGAGAAGGGAGGAGGTACGGGCGAACCGTTTCTTGCTGCACGAGAGT
AAGACGAGCGCGCTGGCGCGTGGGAAGAATTTGGGGGTGACTGTCGCGCA
AAACAAGGGAGGCGTGGGATTGGCTTTCAGGAGAACGAATGCAGGGGAGT
TCTTGGAAGATGTAGCAGGGATTTGTAGGGTGGAAAGGGATGAGGTATGT
GGAGGGGAGAAGGAATGGAGGAGGAAGAGGTATGCAGCGTTGTTTGGGCC
GAGGGAGGGAGTGGTGGCTGGGGAGGTAAAGAAGGAGGTGGAAGTGAAGG
AAGAGGAGGACAGTGAAAGTGTGGTTCCACTTGACACCAAGCAGGTAGAG
GTGGAGGGCGGTAAGGATGGGGAAGGAGAGAATGGGAGCGGGGAAACCCA
ACGTGACGCGGAGGAGGATATGGGAGACGACGACGAGGACGACGAGGAAG
AGGAAGAGGACGAGAAGGACGACGATGAGGATGACGAAGGTGGTAGCTAC
AGCAGTCCCCGCTTCCACGGCGTGCAAGGGCTGGTGCGACAAGTCAAAAG
CTACTTGTCCGAGCCCTCCCACATCGAAATGAACAGGTTGACAATGCAGC
GATTGACATCTTCTTACGTCTGGAGAATAAAAACGGCGGGGATGCCACCG
AGGATGAGGAAGACGACCTAA
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Synonyms
Publications