NO08G02340.1, NO08G02340.1 (mRNA) Nannochloropsis oceanica

Overview
NameNO08G02340.1
Unique NameNO08G02340.1
TypemRNA
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1044
Alignment locationchr8:683991..685986 +

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Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr8genomechr8:683991..685986 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. oceanica IMET12017-10-24
Homology annotation for N. oceanica IMET12017-10-25
InterPro analysis for N. oceanica IMET12017-10-25
Annotated Terms
Homology
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BLAST of NO08G02340.1 vs.
Match: EWM26753.1 (phosphoinositol transporter [Nannochloropsis gaditana])

HSP 1 Score: 510.8 bits (1314), Expect = 3.400e-141
Identity = 259/351 (73.79%), Postives = 285/351 (81.20%), Query Frame = 0 
Query:    1 MPAIVEGTDDSTSALTRALREASLAGGE-LPVLPSSTASIDGKGKQDVVE--PVTGAAPSPALSEETAA-SETTAIIADNGGFTVAGADYAGKTAAVMTVEALDPDKPNQRFIDGCPGDLEEAKRRWRNTLQWRKDFGADGILEKPHKFFDLIKESYPHWYCCEGRTGQPVYYERSGQVDQCRMRAAGCGVEELVWHYIWMTEFCYNQLHPSETAKTITILDVQGVGIRDLAGEAFDFLRRSIHLIGEHYPERSLVIMIVGAPTWFSVLWRIIRPLVNERTQKKVKICSKKETFETIKEFVAPEFIPVEYGGLLKYSDQPDSCRRNSPEEVRMREFVLAVNKRHGVEMVKG 348
            MPA VEGT  + S +  ALR+   +  E +   P+  +S   K   D+    PVTGA PS   SE  AA  ++++ ++         ++ A K      VE  DPDKPNQRFIDGC GD+EEAKRRWR TLQWRK+FG D ILEKPHKFFDLIK++YPHWYCC+GRTGQPVYYERSGQVDQ RMRAAGCGVEELVWHYIWMTEFCYNQLHPSETAKTITILDVQGVGIRDLAGEAFDFLRRSIHLIGEHYPERSLVIMIVGAPTWFSVLW+IIRPL+N RTQ K KICSKKETF+TIKEFV PEFIPVEYGGLLKYSDQPDSCRR SPEEVRMREFVLAVN+RHGVEMV+G
Sbjct:    1 MPATVEGTG-TQSMVPSALRDPPGSSAEVIGAFPNPQSS---KVIHDLTHQAPVTGATPSSVQSELAAALDDSSSKVSGTNDHLATSSNLAKK------VETPDPDKPNQRFIDGCLGDMEEAKRRWRITLQWRKEFGTDEILEKPHKFFDLIKDAYPHWYCCQGRTGQPVYYERSGQVDQRRMRAAGCGVEELVWHYIWMTEFCYNQLHPSETAKTITILDVQGVGIRDLAGEAFDFLRRSIHLIGEHYPERSLVIMIVGAPTWFSVLWKIIRPLINSRTQAKCKICSKKETFQTIKEFVDPEFIPVEYGGLLKYSDQPDSCRRQSPEEVRMREFVLAVNRRHGVEMVEG 341
The following BLAST results are available for this feature:
BLAST of NO08G02340.1 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 1
Match NameE-valueIdentityDescription
EWM26753.13.400e-14173.79phosphoinositol transporter [Nannochloropsis gadit... [more]
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
NO08G02340NO08G02340Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
NO08G02340.1NO08G02340.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
NO08G02340.1.cds1NO08G02340.1.cds1Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO08G02340.1.cds2NO08G02340.1.cds2Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO08G02340.1.cds3NO08G02340.1.cds3Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO08G02340.1.cds4NO08G02340.1.cds4Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO08G02340.1.cds5NO08G02340.1.cds5Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO08G02340.1.cds6NO08G02340.1.cds6Nannochloropsis oceanica (N. oceanica IMET1)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>NO08G02340.1 ID=NO08G02340.1|Name=NO08G02340.1|organism=Nannochloropsis oceanica|type=mRNA|length=1044bp
ATGCCTGCGATTGTCGAAGGCACCGATGACAGTACCAGCGCCTTGACACG
GGCGTTGCGGGAAGCTTCCTTGGCGGGCGGAGAGCTGCCAGTACTCCCTT
CGTCGACGGCGAGCATCGACGGCAAGGGCAAGCAAGATGTGGTTGAGCCT
GTCACCGGAGCTGCACCCTCGCCTGCGCTGTCCGAGGAGACCGCGGCGTC
GGAAACTACAGCAATCATAGCTGACAATGGCGGTTTTACTGTGGCTGGGG
CTGATTATGCGGGTAAGACGGCGGCAGTAATGACGGTGGAGGCGCTGGAC
CCGGACAAGCCCAACCAGCGCTTCATCGACGGCTGCCCGGGGGACTTGGA
GGAGGCGAAGCGGCGGTGGCGCAATACATTGCAGTGGAGAAAGGATTTTG
GCGCAGACGGGATCTTGGAGAAGCCCCACAAGTTTTTCGATTTAATCAAG
GAATCGTACCCTCACTGGTACTGTTGCGAAGGCCGCACTGGCCAGCCCGT
GTATTACGAGCGATCTGGACAAGTGGACCAGTGTCGCATGCGAGCAGCGG
GTTGTGGAGTAGAGGAGCTTGTGTGGCACTACATATGGATGACGGAGTTT
TGCTACAACCAGCTGCACCCGAGCGAGACGGCCAAAACCATCACCATCCT
CGACGTGCAGGGCGTGGGCATCCGAGACTTGGCGGGTGAGGCCTTTGACT
TCTTGCGGCGGTCTATTCATCTGATTGGCGAGCACTATCCCGAGCGATCT
CTGGTGATTATGATTGTGGGGGCCCCGACCTGGTTTAGCGTCCTGTGGCG
TATTATTCGGCCTCTCGTCAACGAGAGGACGCAGAAAAAGGTCAAGATCT
GCAGTAAAAAAGAGACGTTCGAGACGATCAAGGAATTTGTTGCCCCCGAG
TTTATCCCCGTTGAGTACGGCGGCTTACTCAAGTACTCCGACCAGCCCGA
CAGCTGCCGTCGGAATTCCCCCGAGGAGGTGCGTATGCGGGAATTTGTGC
TTGCTGTGAACAAGCGGCACGGGGTGGAGATGGTCAAGGGTTAG
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protein sequence of NO08G02340.1

>NO08G02340.1-protein ID=NO08G02340.1-protein|Name=NO08G02340.1|organism=Nannochloropsis oceanica|type=polypeptide|length=348bp
MPAIVEGTDDSTSALTRALREASLAGGELPVLPSSTASIDGKGKQDVVEP
VTGAAPSPALSEETAASETTAIIADNGGFTVAGADYAGKTAAVMTVEALD
PDKPNQRFIDGCPGDLEEAKRRWRNTLQWRKDFGADGILEKPHKFFDLIK
ESYPHWYCCEGRTGQPVYYERSGQVDQCRMRAAGCGVEELVWHYIWMTEF
CYNQLHPSETAKTITILDVQGVGIRDLAGEAFDFLRRSIHLIGEHYPERS
LVIMIVGAPTWFSVLWRIIRPLVNERTQKKVKICSKKETFETIKEFVAPE
FIPVEYGGLLKYSDQPDSCRRNSPEEVRMREFVLAVNKRHGVEMVKG*
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mRNA from alignment at chr8:683991..685986+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>NO08G02340.1 ID=NO08G02340.1|Name=NO08G02340.1|organism=Nannochloropsis oceanica|type=mRNA|length=1996bp|location=Sequence derived from alignment at chr8:683991..685986+ (Nannochloropsis oceanica)
ATGCCTGCGATTGTCGAAGGCACCGATGACAGTACCAGCGCCTTGACACG
GGCGTTGCGGGAAGCTTCCTTGGCGGGCGGAGAGCTGCCAGTACTCCCTT
CGTCGACGGCGAGCATCGACGGCAAGGGCAAGCAAGATGTGGTTGAGCCT
GTCACCGGAGCTGCACCCTCGCCTGCGCTGTCCGAGGAGACCGCGGCGTC
GGAAACTACAGCAATCATAGCTGACAATGGCGGTTTTACTGTGGCTGGGG
CTGATTATGCGGGTAAGACGGCGGCAGTAATGACGGTGGAGGCGCTGGAC
CCGGACAAGCCCAACCAGCGCTTCATCGACGGCTGCCCGGGGGACTTGGA
GGAGGCGAAGCGGCGGTGGCGCAATACATTGCAGTGGAGAAAGGATTTTG
GCGCAGACGGGATCTTGGAGAAGCCCCACAAGTTTTTCGATTTAATCAAG
GAATCGTACCCTCACTGGTACTGTTGCGAAGGCCGCACTGGCCAGCCCGT
GTATTACGAGCGATCTGGACAAGTGGTGAGTAAACATTCTCTATAAATGG
GCCTGAGGCCTCTCCTTTGTTTTCCCTTTTGAGCCATTGACTGACACCCG
TTTTTTGTCAGTAGTATTGTGACATGTTGCCGCTCCACACCGAGACCTGT
CTCCGGGTCTAGGATTTTTTTTTGTCAAAACGTCGATGATTTTGCGGCGA
TCGTCGGCGAGGACGGCGACACTGCACACCCTCTCATGTTCCTACAAATC
ATGTGGATCCCCTTCTTCTTCTTCTGCTATTCCTTCTTTTTTTTATTCTT
TTTGTTCTTCTTTTTTCACGGGCGGGAAGCTGACCCGGAAGGGTCTGTAA
CGAGCCCGGACACGGAAAGATGAAAGGCCAAGGGGTTAGTTTCGCCAGCA
ACCAGTTGATACGTTGATCATTTAATATGCCTTAAAGCTGTTTTTTTAAT
TCGTGTCTTGACGTCTAGGACCAGTGTCGCATGCGAGCAGCGGGTTGTGG
AGTAGAGGAGCTTGTGTGGCACTACATATGGATGGTAAGTTTTGAAAAGT
TTCAACGCGTATTATCAAATTATGGGAAGTCATGCGTAGAAGATGCGGGG
GCAATTTCACGAAAGAAATGCTCACTCTTATTCAATTTTCTGTCTTGCCT
CTTTTTCTTTCCAACAATGTCTTACAGACGGAGTTTTGCTACAACCAGCT
GCACCCGAGCGAGACGGCCAAAACCATCACCATCCTCGACGTGCAGGGCG
TGGGCATCCGAGACTTGGGTACGCATTTCTTTTTGGCAGTAGTGTGGGTG
GGAGTAGAAGTGGAGTTGACCCTGAATGCGGCCGTTAAGAGATCAGATAC
CTCTTTTCATTTCCCTTTCTTTTCCCTCATTCTCACCATGCATCGTGTCA
CTTACAGCGGGTGAGGCCTTTGACTTCTTGCGGCGGTCTATTCATCTGAT
TGGCGAGCACTATCCCGAGCGATCTGTAAGTGCGGTGGTGGGGATGCAAT
GGAAGGGGATGCAATAACAGGTGGAAAGTAGCACAGAAGTAATGGAAATT
ATGGAATGATCCCTTTTCCATTCCCCACTCCGCAGCTGGTGATTATGATT
GTGGGGGCCCCGACCTGGTTTAGCGTCCTGTGGCGTATTATTCGGCCTCT
CGTCAACGAGAGGACGCAGAAAAAGGTCAAGATCTGCAGTAAAAAAGGTA
CGTGTGATTGTTCGCAATGTGAGGGGGAAGAAAAAGGTACCTTTTTTGTC
ATTAAAAAAACGCAACCGTCTTCCATTTCACCTCCACCCATTTACTCTCT
TCTCTGATGCCCAGAGACGTTCGAGACGATCAAGGAATTTGTTGCCCCCG
AGTTTATCCCCGTTGAGTACGGCGGCTTACTCAAGTACTCCGACCAGCCC
GACAGCTGCCGTCGGAATTCCCCCGAGGAGGTGCGTATGCGGGAATTTGT
GCTTGCTGTGAACAAGCGGCACGGGGTGGAGATGGTCAAGGGTTAG
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Coding sequence (CDS) from alignment at chr8:683991..685986+

>NO08G02340.1 ID=NO08G02340.1|Name=NO08G02340.1|organism=Nannochloropsis oceanica|type=CDS|length=1044bp|location=Sequence derived from alignment at chr8:683991..685986+ (Nannochloropsis oceanica)
ATGCCTGCGATTGTCGAAGGCACCGATGACAGTACCAGCGCCTTGACACG
GGCGTTGCGGGAAGCTTCCTTGGCGGGCGGAGAGCTGCCAGTACTCCCTT
CGTCGACGGCGAGCATCGACGGCAAGGGCAAGCAAGATGTGGTTGAGCCT
GTCACCGGAGCTGCACCCTCGCCTGCGCTGTCCGAGGAGACCGCGGCGTC
GGAAACTACAGCAATCATAGCTGACAATGGCGGTTTTACTGTGGCTGGGG
CTGATTATGCGGGTAAGACGGCGGCAGTAATGACGGTGGAGGCGCTGGAC
CCGGACAAGCCCAACCAGCGCTTCATCGACGGCTGCCCGGGGGACTTGGA
GGAGGCGAAGCGGCGGTGGCGCAATACATTGCAGTGGAGAAAGGATTTTG
GCGCAGACGGGATCTTGGAGAAGCCCCACAAGTTTTTCGATTTAATCAAG
GAATCGTACCCTCACTGGTACTGTTGCGAAGGCCGCACTGGCCAGCCCGT
GTATTACGAGCGATCTGGACAAGTGGACCAGTGTCGCATGCGAGCAGCGG
GTTGTGGAGTAGAGGAGCTTGTGTGGCACTACATATGGATGACGGAGTTT
TGCTACAACCAGCTGCACCCGAGCGAGACGGCCAAAACCATCACCATCCT
CGACGTGCAGGGCGTGGGCATCCGAGACTTGGCGGGTGAGGCCTTTGACT
TCTTGCGGCGGTCTATTCATCTGATTGGCGAGCACTATCCCGAGCGATCT
CTGGTGATTATGATTGTGGGGGCCCCGACCTGGTTTAGCGTCCTGTGGCG
TATTATTCGGCCTCTCGTCAACGAGAGGACGCAGAAAAAGGTCAAGATCT
GCAGTAAAAAAGAGACGTTCGAGACGATCAAGGAATTTGTTGCCCCCGAG
TTTATCCCCGTTGAGTACGGCGGCTTACTCAAGTACTCCGACCAGCCCGA
CAGCTGCCGTCGGAATTCCCCCGAGGAGGTGCGTATGCGGGAATTTGTGC
TTGCTGTGAACAAGCGGCACGGGGTGGAGATGGTCAAGGGTTAG
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Synonyms
Publications