NO08G01660.1, NO08G01660.1 (mRNA) Nannochloropsis oceanica

Overview
NameNO08G01660.1
Unique NameNO08G01660.1
TypemRNA
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length4110
Alignment locationchr8:520569..525621 +

Link to JBrowse

Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr8genomechr8:520569..525621 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. oceanica IMET12017-10-24
Homology annotation for N. oceanica IMET12017-10-25
InterPro analysis for N. oceanica IMET12017-10-25
Annotated Terms
Homology
BLAST of NO08G01660.1 vs.
Match: EWM26576.1 (hydantoin utilization protein a [Nannochloropsis gaditana])

HSP 1 Score: 2213.3 bits (5734), Expect = 0.000e+0
Identity = 1103/1371 (80.45%), Postives = 1200/1371 (87.53%), Query Frame = 0
Query:    1 MANVRPDDRYRLGIDVGGTFTDLLLVNVRTSAISAKAKVPSTPHDPSEGVLNGIKKICAIANIDMAQVEHILHGTTVATNAVLEGKGVNVGLITTEGHRQILHIDRSFVPGGLAAFIVWNKGPLLAPLEATVEVKERIDAAGRVVRGLDVADLRKQIEVLKREKVEAVTVCLMNAYVNGMHEEAVREVLREEMPNIPVSISSEVLPEMYEYERALTTVANSYICPTISTYITNLQRAVQGSKLSILRSDGGLSSEDNACRFPVNLLMSGPAGGVTGAMWISDKVGYGNLLTMDVGGTSADVALIEGGVPKRRKETRVGDVTVRAQALDVHTVGAGGGSIAHVPTLTNALRVGPESAGAMPGPACYGKGGTAPTVTDANVVLGYLPSALLGGEFKLDIDAAQKAVSGIAEKLGMNVRDAAKGIVDIVNEKMFGALRLVSVEQGYDPRDFALVSFGGAGSLHANAVAKLMGSWPVLVPPSPGVLCAFGDATTRTRHDCSRSFVREFAEVKAEEILTILSGLGEQAAALLEKDGIGREEQELTFAADVRYKGQGLTMPLGIEIEKMEREGLLWLASAFDAEHRKQFHFSFDKDHELVNLRAVVESKPAKAEAIKLEKAGGEDAGEARVGKQEVYMEGKMMQAGIYDRRLLKAGHAVEGPAIITEMDSTTLVLSDCKAVVHETGVILINPKPAPAAA--PATLSEKRLREKEEKEVEVEVDVVTLDIVENALRSIKIEMDAVLYRTAMSPGIREQHDQFGLVASPTGQMVVGQFGSFIHGLMQSYTKPIEDGDVILLSDPYSCGGAVSHANDWLAVMPIFTAPKTERVEKGCIVQGELVGWAAMFGHVTDIGGKVACSMPNDACTIYEEGVVIPPVRLYQRGVLNEDLLELILHQCRMPIWNKCDLMAIVASVKLARARILELCGRFGVKEYLKALDLMLERNKMAMGELIRTSIPQEELYFEDYVCDDSMGLGPFKICCTMEKLEGGRLRFDFTGTDRQSPGSINFFLNEDMFRMFCGAYMIQVFDPEIVLNDGFYSLLDVVIPEGSLLKPKKPAALSCRTHALGRIFDILTGLLGQRQPEYLCAAGFSSSPHIMYSGRDEGGKWFQYYGIGFGGIPGRPFGDGADGHSLWPSFTNIPNEFMEKYFPVRIERFYTVPNSGGAGLHRGGNGINIVYRFLEDGELSIHDDRWLTSPWGVNGGRPGERSRKILYRGCPLEEIEGGERVVIPSKCDHVKVKKGDVLHYITWGGGGWGDPLMRPVAAVTADVRRGLVTLEGAEEGYGVVVSKEGAVDLTATEAARAARLSAAAAVVKQEVMRGREGEGSRQGVFDFGFRKGMKATQEEIRMLLSRCEEETGLAPPVLPGEGETHCHLDN 1370
            MA+ RPDD YRLGIDVGG+FTDLLL+NVRTSAI+AKAKVPSTPHDPSEGVLNGIKKIC +A + M+QV+H+LHGTTVATNAVLEGKGV VGLITTEG+RQILHIDRSFVPGGLAAFIVWNKGPLLAPLEATVEVKERIDA G VVR LD  DLR+QI  LKREKV+AVTVCLMNAYVN  HEE VR+VL EEMP  PVS+SSEVLPEMYEYERALTTVANSYI P ++TY+ NLQRA+ GSKLSILRSDGGLSSE+NACRFPVNLLMSGPAGGVTGA+WIS+KVGY NLL++DVGGTSADVALIEGGVPKRRKETRVGDVTVRAQALDVHTVGAGGGSIAHVP LT+ALRVGPESAGAMPGPACYG GGTAPTVTDANVVLGYLPSALLGGEFKLDI A+QKAV  +A KL M+V DAA+GI+DIVNEKMFGALRLVSVEQGYDPRDFALVSFGGAGSLHANAVAKLMGSWPVLVPPSPGVLCAFGDATTRTR+DCSRSFVR F E    E+L IL  LG QAA LL++DGI REEQE TF+ADVRYKGQGLTMPL ++I     EGL WLA AFDAEHRKQFHFSFDKDHELVNLRAV ES+PA+ EA+ L +A       AR G  +VYMEG++ +A IYDR  L AGH VEGPAIITEMDSTTLVL+DC+A VHETGVILINPKP       P +       +         +D VTLDIVENALRSI+ EMDAVLYRTAMSPGIREQHDQF ++A+P GQMVVGQFGSFIHGLM+SYTKPIEDGD+ILLSDPYSC GA+SHANDWLAVMPIF      R ++    QG LVGWAAMFGHVTDIGGKVACSMPNDA +I+EEGVVIPPVRLY+RG LNEDLLELILHQ RMP+WNKCDLMAIVASVKLARARILELC RFGVK YL+ALDLMLERNK AM ELIRTS+P +ELYFEDYVCDDSMGLGP+KICCTM KL  GRLRFDFTGTD QSPGSINFFLNEDMFRMFCGAYMI VFDPEI+LNDGFYSLLDV+IPEGSLLKP+KPAALSCRTHALGRIFDILTGLLGQRQPEYLCAAGFSSSPHIMYSGRD  G+WFQYYGIGFGGIPGRPFGDGADGHSLWPSFTNIPNEFMEKYFPVRIERFYTVP+SGG G++RGGNGINIVYRFLEDGE+SIHDDRWLTSPWGVNGG+PG RS K+LYRGCPL+ +EGGERVV+PSKCDHVKVKKGD+LHY+TWGGGGWG+PL RPVAAV  DVRRGLV++EGA  GYGVV S E  VD  AT A R+A LS AA   ++E  +G     S QG+FDFGFRKG++AT  E++ LL+ C++ETGL PP+LP E     HLDN
Sbjct:    1 MADNRPDDNYRLGIDVGGSFTDLLLINVRTSAIAAKAKVPSTPHDPSEGVLNGIKKICKLAGVSMSQVQHVLHGTTVATNAVLEGKGVKVGLITTEGYRQILHIDRSFVPGGLAAFIVWNKGPLLAPLEATVEVKERIDADGMVVRPLDEGDLRRQIATLKREKVKAVTVCLMNAYVNAAHEECVRKVLAEEMPGTPVSLSSEVLPEMYEYERALTTVANSYIRPNVATYLGNLQRAIPGSKLSILRSDGGLSSEENACRFPVNLLMSGPAGGVTGALWISEKVGYKNLLSLDVGGTSADVALIEGGVPKRRKETRVGDVTVRAQALDVHTVGAGGGSIAHVPQLTSALRVGPESAGAMPGPACYGHGGTAPTVTDANVVLGYLPSALLGGEFKLDIAASQKAVGEVAAKLDMSVLDAARGIIDIVNEKMFGALRLVSVEQGYDPRDFALVSFGGAGSLHANAVAKLMGSWPVLVPPSPGVLCAFGDATTRTRNDCSRSFVRRFTETDGGEVLGILEALGTQAAELLDRDGIPREEQETTFSADVRYKGQGLTMPLVVDIASFAAEGLAWLAKAFDAEHRKQFHFSFDKDHELVNLRAVAESRPAQVEALTLPRARDPSPAPARTGDNQVYMEGRLQKAAIYDRAKLLAGHVVEGPAIITEMDSTTLVLADCRAEVHETGVILINPKPGLEEGWEPGS-GNGGTGDAGHCLTPPAIDTVTLDIVENALRSIRFEMDAVLYRTAMSPGIREQHDQFPMIANPRGQMVVGQFGSFIHGLMKSYTKPIEDGDIILLSDPYSCDGAMSHANDWLAVMPIFAPASGGRGQEED--QGRLVGWAAMFGHVTDIGGKVACSMPNDAHSIFEEGVVIPPVRLYRRGELNEDLLELILHQVRMPVWNKCDLMAIVASVKLARARILELCQRFGVKPYLQALDLMLERNKRAMSELIRTSVPDDELYFEDYVCDDSMGLGPYKICCTMAKLPEGRLRFDFTGTDPQSPGSINFFLNEDMFRMFCGAYMIMVFDPEIILNDGFYSLLDVIIPEGSLLKPRKPAALSCRTHALGRIFDILTGLLGQRQPEYLCAAGFSSSPHIMYSGRDSAGEWFQYYGIGFGGIPGRPFGDGADGHSLWPSFTNIPNEFMEKYFPVRIERFYTVPDSGGPGINRGGNGINIVYRFLEDGEVSIHDDRWLTSPWGVNGGKPGRRSTKVLYRGCPLDSVEGGERVVVPSKCDHVKVKKGDLLHYVTWGGGGWGNPLSRPVAAVVQDVRRGLVSVEGARAGYGVVFSGE-EVDEAATAATRSALLSQAALPKEEE--KGSAEPSSGQGIFDFGFRKGLQATPAEVQQLLASCQKETGLPPPMLPAE----AHLDN 1361          
The following BLAST results are available for this feature:
BLAST of NO08G01660.1 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 1
Match NameE-valueIdentityDescription
EWM26576.10.000e+080.45hydantoin utilization protein a [Nannochloropsis g... [more]
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
NO08G01660NO08G01660Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
NO08G01660.1NO08G01660.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
NO08G01660.1.cds1NO08G01660.1.cds1Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO08G01660.1.cds2NO08G01660.1.cds2Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO08G01660.1.cds3NO08G01660.1.cds3Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO08G01660.1.cds4NO08G01660.1.cds4Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO08G01660.1.cds5NO08G01660.1.cds5Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO08G01660.1.cds6NO08G01660.1.cds6Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO08G01660.1.cds7NO08G01660.1.cds7Nannochloropsis oceanica (N. oceanica IMET1)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>NO08G01660.1 ID=NO08G01660.1|Name=NO08G01660.1|organism=Nannochloropsis oceanica|type=mRNA|length=4110bp
ATGGCTAACGTCCGGCCTGACGATCGGTACCGGCTCGGGATTGATGTCGG
AGGCACATTTACGGACCTCCTCCTCGTTAATGTTCGCACAAGCGCAATTT
CGGCCAAGGCCAAGGTTCCCTCTACCCCGCACGATCCTAGCGAAGGTGTC
CTGAACGGCATCAAGAAAATCTGCGCCATCGCCAATATCGACATGGCCCA
AGTCGAGCACATTCTCCACGGAACCACCGTTGCAACCAACGCTGTCCTTG
AGGGAAAGGGGGTGAATGTGGGGCTCATCACCACGGAGGGGCATCGTCAG
ATACTGCACATCGACCGATCCTTCGTTCCTGGGGGGTTGGCCGCCTTTAT
CGTGTGGAACAAGGGCCCCCTGCTCGCGCCGCTGGAGGCCACGGTGGAGG
TAAAGGAGAGGATTGATGCAGCGGGACGGGTGGTGAGGGGGCTGGATGTC
GCGGATTTACGGAAGCAGATCGAGGTGTTGAAGAGGGAGAAGGTGGAGGC
GGTGACGGTGTGCTTGATGAATGCCTACGTGAATGGAATGCACGAGGAGG
CGGTTCGTGAGGTGCTACGGGAGGAGATGCCCAACATCCCTGTCTCGATC
TCCTCGGAAGTCCTCCCAGAAATGTACGAGTACGAGCGCGCCCTCACCAC
CGTCGCCAACAGCTACATCTGCCCTACCATCAGCACCTACATCACTAATT
TACAACGAGCCGTCCAAGGTTCCAAGCTCTCCATTCTCCGCTCTGACGGT
GGTCTTTCCTCCGAAGACAACGCCTGCCGTTTCCCTGTCAATCTGCTCAT
GTCCGGGCCTGCTGGAGGGGTGACAGGCGCCATGTGGATAAGCGACAAGG
TCGGGTACGGGAACCTCTTGACCATGGACGTAGGGGGCACGTCAGCTGAC
GTCGCCCTGATCGAAGGCGGCGTCCCTAAACGCAGGAAAGAGACGCGGGT
AGGGGACGTAACGGTGCGTGCCCAAGCGCTTGATGTGCATACAGTGGGCG
CAGGAGGAGGATCCATTGCCCATGTCCCTACCCTGACGAACGCCCTACGG
GTCGGGCCGGAGAGCGCGGGGGCCATGCCCGGGCCGGCGTGCTACGGCAA
AGGCGGTACCGCACCCACCGTGACGGATGCAAATGTCGTCCTGGGCTACT
TGCCATCGGCCTTGTTGGGGGGCGAGTTTAAGTTGGATATAGACGCGGCC
CAGAAGGCCGTGAGCGGGATAGCGGAGAAGCTGGGGATGAATGTCCGTGA
TGCGGCGAAGGGCATCGTCGACATCGTGAACGAGAAGATGTTCGGGGCGT
TGCGACTTGTGAGTGTAGAACAAGGGTACGACCCCCGCGACTTCGCCCTG
GTCAGCTTTGGAGGCGCCGGCTCGCTACATGCCAATGCGGTGGCCAAGCT
CATGGGTTCTTGGCCTGTGCTAGTCCCTCCTTCTCCAGGTGTGTTGTGTG
CTTTCGGCGATGCCACCACCCGGACACGACACGATTGCTCGCGATCGTTT
GTGAGGGAATTTGCTGAGGTAAAGGCAGAGGAGATTTTGACTATTCTCTC
GGGGCTGGGGGAGCAAGCTGCAGCCTTGTTGGAGAAGGATGGGATAGGGA
GGGAAGAGCAGGAGTTGACGTTTGCGGCAGACGTGCGGTACAAAGGACAG
GGATTGACAATGCCCCTGGGGATTGAGATTGAAAAAATGGAAAGGGAGGG
CTTGCTATGGCTGGCGAGTGCGTTTGACGCGGAGCATCGGAAGCAATTCC
ACTTCAGCTTTGACAAGGACCATGAGCTGGTGAATCTTAGGGCGGTAGTG
GAGAGCAAGCCCGCCAAGGCAGAAGCCATCAAATTGGAAAAGGCTGGTGG
GGAGGACGCGGGGGAGGCAAGGGTTGGGAAGCAGGAGGTGTATATGGAGG
GAAAGATGATGCAGGCTGGGATTTATGACCGGAGGTTACTGAAGGCGGGA
CACGCGGTAGAGGGGCCGGCGATCATCACGGAGATGGATTCAACTACGCT
TGTGTTGTCGGATTGTAAGGCAGTGGTGCACGAGACGGGTGTGATTCTGA
TCAACCCCAAGCCTGCTCCTGCTGCTGCTCCTGCGACTCTCTCGGAAAAG
AGGCTGAGGGAGAAGGAGGAGAAGGAGGTGGAGGTGGAGGTGGATGTGGT
AACGCTCGATATTGTTGAGAATGCTCTGAGGTCGATTAAGATTGAGATGG
ACGCCGTATTGTATAGGACGGCCATGAGTCCGGGTATACGGGAGCAGCAT
GATCAGTTCGGGCTCGTGGCGTCTCCGACCGGGCAGATGGTCGTGGGGCA
ATTTGGGAGTTTTATTCACGGACTGATGCAGAGCTACACCAAGCCGATTG
AGGATGGGGACGTGATCTTGTTGAGCGATCCCTATTCGTGCGGGGGGGCG
GTGTCGCATGCCAATGACTGGTTGGCTGTCATGCCGATTTTTACGGCACC
CAAAACGGAAAGAGTAGAAAAGGGGTGTATAGTGCAGGGGGAGCTGGTGG
GGTGGGCAGCGATGTTTGGGCACGTGACAGACATCGGCGGGAAAGTAGCC
TGTTCCATGCCGAATGATGCGTGCACGATCTACGAGGAGGGGGTAGTTAT
TCCCCCGGTGCGGTTGTATCAGCGGGGGGTATTGAATGAGGATTTGTTGG
AGTTGATATTGCACCAGTGTCGGATGCCGATCTGGAATAAATGTGACTTG
ATGGCGATTGTTGCGAGCGTCAAGTTGGCCCGGGCGAGGATTTTGGAGCT
GTGTGGGAGGTTTGGAGTGAAAGAGTACTTGAAGGCGTTAGACCTAATGC
TGGAGAGGAACAAGATGGCGATGGGTGAGTTGATCCGGACAAGCATCCCG
CAGGAGGAGTTATATTTTGAGGACTACGTTTGCGATGACTCGATGGGGCT
GGGACCATTTAAGATTTGTTGTACCATGGAGAAGTTGGAGGGGGGTCGGT
TGAGGTTTGACTTTACGGGGACGGATCGACAGAGTCCCGGGAGTATCAAT
TTTTTCTTGAACGAGGACATGTTCCGAATGTTTTGTGGTGCTTACATGAT
TCAAGTGTTCGACCCTGAGATCGTTCTAAATGATGGGTTTTACTCGTTGC
TTGACGTGGTGATTCCGGAGGGGTCCTTGCTGAAGCCCAAAAAGCCGGCG
GCGTTGTCTTGCCGTACGCACGCGCTAGGGAGAATCTTCGACATTTTGAC
GGGCTTGCTCGGGCAACGACAACCGGAGTATTTATGTGCCGCGGGGTTTA
GTTCAAGCCCGCATATCATGTATTCAGGGAGAGACGAAGGGGGTAAGTGG
TTCCAGTACTACGGCATCGGGTTTGGGGGGATTCCAGGGAGGCCCTTCGG
GGATGGCGCGGACGGGCACAGTTTATGGCCGAGTTTCACGAATATCCCGA
ATGAATTTATGGAAAAGTACTTTCCAGTGAGGATTGAGCGCTTTTACACG
GTGCCAAACTCGGGTGGGGCGGGGTTGCATAGGGGGGGGAATGGGATTAA
TATTGTGTATCGGTTTTTGGAGGATGGCGAGTTGTCGATCCACGACGATA
GGTGGTTGACGAGCCCTTGGGGCGTGAATGGAGGGCGACCGGGAGAGAGG
AGCCGAAAGATTCTTTACCGGGGCTGTCCGTTGGAAGAGATAGAGGGGGG
GGAGCGTGTGGTGATTCCGAGTAAGTGCGACCATGTGAAGGTGAAAAAGG
GGGATGTACTTCATTATATTACCTGGGGAGGAGGAGGATGGGGGGATCCG
TTGATGAGACCGGTCGCGGCTGTAACGGCAGATGTGAGGCGGGGGCTTGT
GACTCTTGAGGGAGCGGAGGAGGGGTACGGTGTGGTGGTGTCGAAGGAGG
GGGCTGTAGATCTTACCGCGACGGAGGCAGCGCGCGCAGCACGCTTGTCG
GCTGCGGCGGCGGTGGTGAAGCAGGAGGTGATGAGAGGGAGGGAAGGAGA
GGGGAGTAGGCAGGGGGTATTTGATTTTGGGTTTCGGAAGGGGATGAAGG
CGACCCAAGAAGAAATTCGGATGCTGTTGTCTCGGTGTGAGGAAGAGACG
GGATTGGCACCTCCGGTGCTACCTGGGGAGGGGGAGACGCATTGCCATTT
GGACAACTAA
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protein sequence of NO08G01660.1

>NO08G01660.1-protein ID=NO08G01660.1-protein|Name=NO08G01660.1|organism=Nannochloropsis oceanica|type=polypeptide|length=1370bp
MANVRPDDRYRLGIDVGGTFTDLLLVNVRTSAISAKAKVPSTPHDPSEGV
LNGIKKICAIANIDMAQVEHILHGTTVATNAVLEGKGVNVGLITTEGHRQ
ILHIDRSFVPGGLAAFIVWNKGPLLAPLEATVEVKERIDAAGRVVRGLDV
ADLRKQIEVLKREKVEAVTVCLMNAYVNGMHEEAVREVLREEMPNIPVSI
SSEVLPEMYEYERALTTVANSYICPTISTYITNLQRAVQGSKLSILRSDG
GLSSEDNACRFPVNLLMSGPAGGVTGAMWISDKVGYGNLLTMDVGGTSAD
VALIEGGVPKRRKETRVGDVTVRAQALDVHTVGAGGGSIAHVPTLTNALR
VGPESAGAMPGPACYGKGGTAPTVTDANVVLGYLPSALLGGEFKLDIDAA
QKAVSGIAEKLGMNVRDAAKGIVDIVNEKMFGALRLVSVEQGYDPRDFAL
VSFGGAGSLHANAVAKLMGSWPVLVPPSPGVLCAFGDATTRTRHDCSRSF
VREFAEVKAEEILTILSGLGEQAAALLEKDGIGREEQELTFAADVRYKGQ
GLTMPLGIEIEKMEREGLLWLASAFDAEHRKQFHFSFDKDHELVNLRAVV
ESKPAKAEAIKLEKAGGEDAGEARVGKQEVYMEGKMMQAGIYDRRLLKAG
HAVEGPAIITEMDSTTLVLSDCKAVVHETGVILINPKPAPAAAPATLSEK
RLREKEEKEVEVEVDVVTLDIVENALRSIKIEMDAVLYRTAMSPGIREQH
DQFGLVASPTGQMVVGQFGSFIHGLMQSYTKPIEDGDVILLSDPYSCGGA
VSHANDWLAVMPIFTAPKTERVEKGCIVQGELVGWAAMFGHVTDIGGKVA
CSMPNDACTIYEEGVVIPPVRLYQRGVLNEDLLELILHQCRMPIWNKCDL
MAIVASVKLARARILELCGRFGVKEYLKALDLMLERNKMAMGELIRTSIP
QEELYFEDYVCDDSMGLGPFKICCTMEKLEGGRLRFDFTGTDRQSPGSIN
FFLNEDMFRMFCGAYMIQVFDPEIVLNDGFYSLLDVVIPEGSLLKPKKPA
ALSCRTHALGRIFDILTGLLGQRQPEYLCAAGFSSSPHIMYSGRDEGGKW
FQYYGIGFGGIPGRPFGDGADGHSLWPSFTNIPNEFMEKYFPVRIERFYT
VPNSGGAGLHRGGNGINIVYRFLEDGELSIHDDRWLTSPWGVNGGRPGER
SRKILYRGCPLEEIEGGERVVIPSKCDHVKVKKGDVLHYITWGGGGWGDP
LMRPVAAVTADVRRGLVTLEGAEEGYGVVVSKEGAVDLTATEAARAARLS
AAAAVVKQEVMRGREGEGSRQGVFDFGFRKGMKATQEEIRMLLSRCEEET
GLAPPVLPGEGETHCHLDN*
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mRNA from alignment at chr8:520569..525621+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>NO08G01660.1 ID=NO08G01660.1|Name=NO08G01660.1|organism=Nannochloropsis oceanica|type=mRNA|length=5053bp|location=Sequence derived from alignment at chr8:520569..525621+ (Nannochloropsis oceanica)
ATGGCTAACGTCCGGCCTGACGATCGGTACCGGCTCGGGTAAGCAAGTAC AAGCACCACACAGAAAGAAGCGTGGGGCGGCAGAATGAGGGGGGAGAAGG GATGTCACGCATGCACTCAAACGCACACACCATCGCCTCATCCTTTCCCT CTCACGCATATACAGGATTGATGTCGGAGGCACATTTACGGACCTCCTCC TCGTTAATGTTCGCACAAGCGCAATTTCGGCCAAGGCCAAGGTTCCCTCT ACCCCGCACGATCCTAGCGAAGGTGTCCTGAACGGCATCAAGGTGCGTCT TCCTTTGTGTCGCGTTGCTCCCCCCGTCTTAAAGCTTTAGTGCTTTATAG TATTTGCCCAAATGTTCAGCCCTTCTACACCTCCCTCCTTTCTCATCACT TTTACCCGCTTATTACGTTCTCACTACTCCTCCCTCACCGCCCTCCTTTC CCTCCACCCACCCTAGAAAATCTGCGCCATCGCCAATATCGACATGGCCC AAGTCGAGCACATTCTCCACGGAACCACCGTTGCAACCAACGCTGTCCTT GAGGGAAAGGGGGTGAATGTGGGGCTCATCACCACGGAGGGGCATCGTCA GATACTGCACATCGACCGATCCTTCGTTCCTGGGGTGAGTCGGAAGGGAG GGAAAGGAGGAGAGGGAAGAAGGGGCTCAAAGAAGAAGAAGTGGTTCGAC CACGAATGGAACTGTTCAGCCACACTCCCTTTCTCGCTACCTCCCTCCCT CGCTTCCTCCTCCTCATTCTAGGGGTTGGCCGCCTTTATCGTGTGGAACA AGGGCCCCCTGCTCGCGCCGCTGGAGGCCACGGTGGAGGTAAAGGAGAGG ATTGATGCAGCGGGACGGGTGGTGAGGGGGCTGGATGTCGCGGATTTACG GAAGCAGATCGAGGTGTTGAAGAGGGAGAAGGTGGAGGCGGTGACGGTGT GCTTGATGAATGCCTACGTGAATGGAATGCACGAGGAGGCGGTTCGTGAG GTGCTACGGGAGGAGATGCCCAACATCCCTGTCTCGGTACGTATGTCATG CACGCATCGCCGCTTATTTTGATTTTAGAAGGCTCACCCTCTTTCCCTCC CTCCCTTCCTCCCCAGATCTCCTCGGAAGTCCTCCCAGAAATGTACGAGT ACGAGCGCGCCCTCACCACCGTCGCCAACAGCTACATCTGCCCTACCATC AGCACCTACATCACTAATTTACAACGAGCCGTCCAAGGTACAGAGGAATG GAGGGAAGGAAAGAGACAGGGAGGGGGTGCATGTACAAATAACACCTTTT GTACGTTTGACCTAATCCTTTTTTCCCTTGTCTGACCTCATCCTTTTCTC CCTTGCCTTACCTCATCCTTTTTTCCCTTCCCTCTCTCCCTCCCTCCCTC CCACCCTCCCCAGGTTCCAAGCTCTCCATTCTCCGCTCTGACGGTGGTCT TTCCTCCGAAGACAACGCCTGCCGTTTCCCTGTCAATCTGCTCATGTCCG GGCCTGCTGGAGGGGTGACAGGCGCCATGTGGATAAGCGACAAGGTCGGG TACGGGAACCTCTTGACCATGGACGTAGGGGGCACGTCAGCTGACGTCGC CCTGATCGAAGGCGGCGTCCCTAAACGCAGGAAAGAGACGCGGGTAGGGG ACGTAACGGTGCGTGCCCAAGCGCTTGATGTGCATACAGTGGGCGCAGGA GGAGGATCCATTGCCCATGTCCCTACCCTGACGAACGCCCTACGGGTCGG GCCGGAGAGCGCGGGGGCCATGCCCGGGCCGGCGTGCTACGGCAAAGGCG GTACCGCACCCACCGTGACGGATGCAAATGTCGTCCTGGGCTACTTGCCA TCGGCCTTGTTGGGGGGCGAGTTTAAGTTGGATATAGACGCGGCCCAGAA GGCCGTGAGCGGGATAGCGGAGAAGCTGGGGATGAATGTCCGTGATGCGG CGAAGGGCATCGTCGACATCGTGAACGAGAAGATGTTCGGGGCGTTGCGA CTTGTGAGTGTAGAACAAGGGTACGTCCACCTTCCAACCTGCTGCCTTAT CTGCCTATCTCCTGTCTACCTATCTATATATATACCTTCATACCCTCCAT CATCGCGACTTGGCCCCGGATCCTTCTGGAGGCGCCGGCTCTTTCAGAGT GCCACCGCTGTGTGTGCCAAGCCAACGCTGTGGCCAGACGCTGCGGCCGG CCCGTGAAAAAATGTCTGTCATTCACCTTCTTTCCTCCCTTCCTCCCTCC CTCCCTCCATCACGGCAGGTACGACCCCCGCGACTTCGCCCTGGTCAGCT TTGGAGGCGCCGGCTCGCTACATGCCAATGCGGTGGCCAAGCTCATGGGT TCTTGGCCTGTGCTAGTCCCTCCTTCTCCAGGTGTGTTGTGTGCTTTCGG CGATGCCACCACCCGGACACGACACGATTGCTCGCGATCGTTTGTGAGGG AATTTGCTGAGGTAAAGGCAGAGGAGATTTTGACTATTCTCTCGGGGCTG GGGGAGCAAGCTGCAGCCTTGTTGGAGAAGGATGGGATAGGGAGGGAAGA GCAGGAGTTGACGTTTGCGGCAGACGTGCGGTACAAAGGACAGGGATTGA CAATGCCCCTGGGGATTGAGATTGAAAAAATGGAAAGGGAGGGCTTGCTA TGGCTGGCGAGTGCGTTTGACGCGGAGCATCGGAAGCAATTCCACTTCAG CTTTGACAAGGACCATGAGCTGGTGAATCTTAGGGCGGTAGTGGAGAGCA AGCCCGCCAAGGCAGAAGCCATCAAATTGGAAAAGGCTGGTGGGGAGGAC GCGGGGGAGGCAAGGGTTGGGAAGCAGGAGGTGTATATGGAGGGAAAGAT GATGCAGGCTGGGATTTATGACCGGAGGTTACTGAAGGCGGGACACGCGG TAGAGGGGCCGGCGATCATCACGGAGATGGATTCAACTACGCTTGTGTTG TCGGATTGTAAGGCAGTGGTGCACGAGACGGGTGTGATTCTGATCAACCC CAAGCCTGCTCCTGCTGCTGCTCCTGCGACTCTCTCGGAAAAGAGGCTGA GGGAGAAGGAGGAGAAGGAGGTGGAGGTGGAGGTGGATGTGGTAACGCTC GATATTGTTGAGAATGCTCTGAGGTCGATTAAGATTGAGATGGACGCCGT ATTGTATAGGACGGCCATGAGTCCGGGTATACGGGAGCAGCATGATCAGT TCGGGCTCGTGGCGTCTCCGACCGGGCAGATGGTCGTGGGGCAATTTGGG AGTTTTATTCACGGACTGATGCAGAGCTACACCAAGCCGATTGAGGATGG GGACGTGATCTTGTTGAGCGATCCCTATTCGTGCGGGGGGGCGGTGTCGC ATGCCAATGACTGGTTGGCTGTCATGCCGATTTTTACGGCACCCAAAACG GAAAGAGTAGAAAAGGGGTGTATAGTGCAGGGGGAGCTGGTGGGGTGGGC AGCGATGTTTGGGCACGTGACAGACATCGGCGGGAAAGTAGCCTGTTCCA TGCCGAATGATGCGTGCACGATCTACGAGGAGGGGGTAGTTATTCCCCCG GTGCGGTTGTATCAGCGGGGGGTATTGAATGAGGATTTGTTGGAGTTGAT ATTGCACCAGTGTCGGATGCCGATCTGGAATAAATGTGACTTGATGGCGA TTGTTGCGAGCGTCAAGTTGGCCCGGGCGAGGATTTTGGAGCTGTGTGGG AGGTTTGGAGTGAAAGAGTACTTGAAGGCGTTAGACCTAATGCTGGAGAG GAACAAGATGGCGATGGGTGAGTTGATCCGGACAAGCATCCCGCAGGAGG AGTTATATTTTGAGGACTACGTTTGCGATGACTCGATGGGGCTGGGACCA TTTAAGATTTGTTGTACCATGGAGAAGTTGGAGGGGGGTCGGTTGAGGTT TGACTTTACGGGGACGGATCGACAGAGTCCCGGGAGTATCAATTTTTTCT TGAACGAGGACATGTTCCGAATGTTTTGTGGTGCTTACATGATTCAAGTG TTCGACCCTGAGATCGTTCTAAATGATGGGTTTTACTCGTTGCTTGACGT GGTGATTCCGGAGGGGTCCTTGCTGAAGCCCAAAAAGCCGGCGGCGTTGT CTTGCCGTACGCACGCGCTAGGGAGAATCTTCGACATTTTGACGGGCTTG CTCGGGCAACGACAACCGGAGTATTTATGTGCCGCGGGGTTTAGTTCAAG CCCGCATATCATGTATTCAGGGAGAGACGAAGGGGGTAAGTGGTTCCAGT ACTACGGCATCGGGTTTGGGGGGATTCCAGGGAGGCCCTTCGGGGATGGC GCGGACGGGCACAGTTTATGGCCGAGTTTCACGAATATCCCGAATGAATT TATGGAAAAGTACTTTCCAGTGAGGATTGAGCGCTTTTACACGGTGCCAA ACTCGGGTGGGGCGGGGTTGCATAGGGGGGGGAATGGGATTAATATTGTG TATCGGTTTTTGGAGGATGGCGAGTTGTCGATCCACGACGATAGGTGGTT GACGAGCCCTTGGGGCGTGAATGGAGGGCGACCGGGAGAGAGGAGCCGAA AGATTCTTTACCGGGGCTGTCCGTTGGAAGAGATAGAGGGGGGGGAGCGT GTGGTGATTCCGAGTAAGTGCGACCATGTGAAGGTGAAAAAGGGGGATGT ACTTCATTATATTACCTGGGGAGGAGGAGGATGGGGGGATCCGTTGATGA GACCGGTCGCGGCTGTAACGGCAGATGTGAGGCGGGGGCTTGTGACTCTT GAGGGAGCGGAGGAGGGGTACGGTGTGGTGGTGTCGAAGGAGGGGGCTGT AGATCTTACCGCGACGGAGGCAGCGCGCGCAGCACGCTTGTCGGCTGCGG CGGCGGTGGTGAAGCAGGAGGTGATGAGAGGGAGGGAAGGAGAGGGGAGT AGGCAGGGGGTATTTGATTTTGGGTTTCGGAAGGGGATGAAGGCGACCCA AGAAGAAATTCGGATGCTGTTGTCTCGGTGTGAGGAAGAGACGGGATTGG CACCTCCGGTGCTACCTGGGGAGGGGGAGACGCATTGCCATTTGGACAAC TAA
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Coding sequence (CDS) from alignment at chr8:520569..525621+

>NO08G01660.1 ID=NO08G01660.1|Name=NO08G01660.1|organism=Nannochloropsis oceanica|type=CDS|length=4110bp|location=Sequence derived from alignment at chr8:520569..525621+ (Nannochloropsis oceanica)
ATGGCTAACGTCCGGCCTGACGATCGGTACCGGCTCGGGATTGATGTCGG
AGGCACATTTACGGACCTCCTCCTCGTTAATGTTCGCACAAGCGCAATTT
CGGCCAAGGCCAAGGTTCCCTCTACCCCGCACGATCCTAGCGAAGGTGTC
CTGAACGGCATCAAGAAAATCTGCGCCATCGCCAATATCGACATGGCCCA
AGTCGAGCACATTCTCCACGGAACCACCGTTGCAACCAACGCTGTCCTTG
AGGGAAAGGGGGTGAATGTGGGGCTCATCACCACGGAGGGGCATCGTCAG
ATACTGCACATCGACCGATCCTTCGTTCCTGGGGGGTTGGCCGCCTTTAT
CGTGTGGAACAAGGGCCCCCTGCTCGCGCCGCTGGAGGCCACGGTGGAGG
TAAAGGAGAGGATTGATGCAGCGGGACGGGTGGTGAGGGGGCTGGATGTC
GCGGATTTACGGAAGCAGATCGAGGTGTTGAAGAGGGAGAAGGTGGAGGC
GGTGACGGTGTGCTTGATGAATGCCTACGTGAATGGAATGCACGAGGAGG
CGGTTCGTGAGGTGCTACGGGAGGAGATGCCCAACATCCCTGTCTCGATC
TCCTCGGAAGTCCTCCCAGAAATGTACGAGTACGAGCGCGCCCTCACCAC
CGTCGCCAACAGCTACATCTGCCCTACCATCAGCACCTACATCACTAATT
TACAACGAGCCGTCCAAGGTTCCAAGCTCTCCATTCTCCGCTCTGACGGT
GGTCTTTCCTCCGAAGACAACGCCTGCCGTTTCCCTGTCAATCTGCTCAT
GTCCGGGCCTGCTGGAGGGGTGACAGGCGCCATGTGGATAAGCGACAAGG
TCGGGTACGGGAACCTCTTGACCATGGACGTAGGGGGCACGTCAGCTGAC
GTCGCCCTGATCGAAGGCGGCGTCCCTAAACGCAGGAAAGAGACGCGGGT
AGGGGACGTAACGGTGCGTGCCCAAGCGCTTGATGTGCATACAGTGGGCG
CAGGAGGAGGATCCATTGCCCATGTCCCTACCCTGACGAACGCCCTACGG
GTCGGGCCGGAGAGCGCGGGGGCCATGCCCGGGCCGGCGTGCTACGGCAA
AGGCGGTACCGCACCCACCGTGACGGATGCAAATGTCGTCCTGGGCTACT
TGCCATCGGCCTTGTTGGGGGGCGAGTTTAAGTTGGATATAGACGCGGCC
CAGAAGGCCGTGAGCGGGATAGCGGAGAAGCTGGGGATGAATGTCCGTGA
TGCGGCGAAGGGCATCGTCGACATCGTGAACGAGAAGATGTTCGGGGCGT
TGCGACTTGTGAGTGTAGAACAAGGGTACGACCCCCGCGACTTCGCCCTG
GTCAGCTTTGGAGGCGCCGGCTCGCTACATGCCAATGCGGTGGCCAAGCT
CATGGGTTCTTGGCCTGTGCTAGTCCCTCCTTCTCCAGGTGTGTTGTGTG
CTTTCGGCGATGCCACCACCCGGACACGACACGATTGCTCGCGATCGTTT
GTGAGGGAATTTGCTGAGGTAAAGGCAGAGGAGATTTTGACTATTCTCTC
GGGGCTGGGGGAGCAAGCTGCAGCCTTGTTGGAGAAGGATGGGATAGGGA
GGGAAGAGCAGGAGTTGACGTTTGCGGCAGACGTGCGGTACAAAGGACAG
GGATTGACAATGCCCCTGGGGATTGAGATTGAAAAAATGGAAAGGGAGGG
CTTGCTATGGCTGGCGAGTGCGTTTGACGCGGAGCATCGGAAGCAATTCC
ACTTCAGCTTTGACAAGGACCATGAGCTGGTGAATCTTAGGGCGGTAGTG
GAGAGCAAGCCCGCCAAGGCAGAAGCCATCAAATTGGAAAAGGCTGGTGG
GGAGGACGCGGGGGAGGCAAGGGTTGGGAAGCAGGAGGTGTATATGGAGG
GAAAGATGATGCAGGCTGGGATTTATGACCGGAGGTTACTGAAGGCGGGA
CACGCGGTAGAGGGGCCGGCGATCATCACGGAGATGGATTCAACTACGCT
TGTGTTGTCGGATTGTAAGGCAGTGGTGCACGAGACGGGTGTGATTCTGA
TCAACCCCAAGCCTGCTCCTGCTGCTGCTCCTGCGACTCTCTCGGAAAAG
AGGCTGAGGGAGAAGGAGGAGAAGGAGGTGGAGGTGGAGGTGGATGTGGT
AACGCTCGATATTGTTGAGAATGCTCTGAGGTCGATTAAGATTGAGATGG
ACGCCGTATTGTATAGGACGGCCATGAGTCCGGGTATACGGGAGCAGCAT
GATCAGTTCGGGCTCGTGGCGTCTCCGACCGGGCAGATGGTCGTGGGGCA
ATTTGGGAGTTTTATTCACGGACTGATGCAGAGCTACACCAAGCCGATTG
AGGATGGGGACGTGATCTTGTTGAGCGATCCCTATTCGTGCGGGGGGGCG
GTGTCGCATGCCAATGACTGGTTGGCTGTCATGCCGATTTTTACGGCACC
CAAAACGGAAAGAGTAGAAAAGGGGTGTATAGTGCAGGGGGAGCTGGTGG
GGTGGGCAGCGATGTTTGGGCACGTGACAGACATCGGCGGGAAAGTAGCC
TGTTCCATGCCGAATGATGCGTGCACGATCTACGAGGAGGGGGTAGTTAT
TCCCCCGGTGCGGTTGTATCAGCGGGGGGTATTGAATGAGGATTTGTTGG
AGTTGATATTGCACCAGTGTCGGATGCCGATCTGGAATAAATGTGACTTG
ATGGCGATTGTTGCGAGCGTCAAGTTGGCCCGGGCGAGGATTTTGGAGCT
GTGTGGGAGGTTTGGAGTGAAAGAGTACTTGAAGGCGTTAGACCTAATGC
TGGAGAGGAACAAGATGGCGATGGGTGAGTTGATCCGGACAAGCATCCCG
CAGGAGGAGTTATATTTTGAGGACTACGTTTGCGATGACTCGATGGGGCT
GGGACCATTTAAGATTTGTTGTACCATGGAGAAGTTGGAGGGGGGTCGGT
TGAGGTTTGACTTTACGGGGACGGATCGACAGAGTCCCGGGAGTATCAAT
TTTTTCTTGAACGAGGACATGTTCCGAATGTTTTGTGGTGCTTACATGAT
TCAAGTGTTCGACCCTGAGATCGTTCTAAATGATGGGTTTTACTCGTTGC
TTGACGTGGTGATTCCGGAGGGGTCCTTGCTGAAGCCCAAAAAGCCGGCG
GCGTTGTCTTGCCGTACGCACGCGCTAGGGAGAATCTTCGACATTTTGAC
GGGCTTGCTCGGGCAACGACAACCGGAGTATTTATGTGCCGCGGGGTTTA
GTTCAAGCCCGCATATCATGTATTCAGGGAGAGACGAAGGGGGTAAGTGG
TTCCAGTACTACGGCATCGGGTTTGGGGGGATTCCAGGGAGGCCCTTCGG
GGATGGCGCGGACGGGCACAGTTTATGGCCGAGTTTCACGAATATCCCGA
ATGAATTTATGGAAAAGTACTTTCCAGTGAGGATTGAGCGCTTTTACACG
GTGCCAAACTCGGGTGGGGCGGGGTTGCATAGGGGGGGGAATGGGATTAA
TATTGTGTATCGGTTTTTGGAGGATGGCGAGTTGTCGATCCACGACGATA
GGTGGTTGACGAGCCCTTGGGGCGTGAATGGAGGGCGACCGGGAGAGAGG
AGCCGAAAGATTCTTTACCGGGGCTGTCCGTTGGAAGAGATAGAGGGGGG
GGAGCGTGTGGTGATTCCGAGTAAGTGCGACCATGTGAAGGTGAAAAAGG
GGGATGTACTTCATTATATTACCTGGGGAGGAGGAGGATGGGGGGATCCG
TTGATGAGACCGGTCGCGGCTGTAACGGCAGATGTGAGGCGGGGGCTTGT
GACTCTTGAGGGAGCGGAGGAGGGGTACGGTGTGGTGGTGTCGAAGGAGG
GGGCTGTAGATCTTACCGCGACGGAGGCAGCGCGCGCAGCACGCTTGTCG
GCTGCGGCGGCGGTGGTGAAGCAGGAGGTGATGAGAGGGAGGGAAGGAGA
GGGGAGTAGGCAGGGGGTATTTGATTTTGGGTTTCGGAAGGGGATGAAGG
CGACCCAAGAAGAAATTCGGATGCTGTTGTCTCGGTGTGAGGAAGAGACG
GGATTGGCACCTCCGGTGCTACCTGGGGAGGGGGAGACGCATTGCCATTT
GGACAACTAA
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Synonyms
Publications