NO07G04680.1, NO07G04680.1 (mRNA) Nannochloropsis oceanica

Overview
NameNO07G04680.1
Unique NameNO07G04680.1
TypemRNA
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length375
Alignment locationchr7:1318660..1319494 -

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Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr7genomechr7:1318660..1319494 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. oceanica IMET12017-10-24
Homology annotation for N. oceanica IMET12017-10-25
InterPro analysis for N. oceanica IMET12017-10-25
Annotated Terms
Homology
The following BLAST results are available for this feature:
BLAST of NO07G04680.1 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
NO07G04680NO07G04680Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
NO07G04680.1NO07G04680.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
NO07G04680.1.cds1NO07G04680.1.cds1Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO07G04680.1.cds2NO07G04680.1.cds2Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO07G04680.1.cds3NO07G04680.1.cds3Nannochloropsis oceanica (N. oceanica IMET1)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>NO07G04680.1 ID=NO07G04680.1|Name=NO07G04680.1|organism=Nannochloropsis oceanica|type=mRNA|length=375bp
ATGTCCACACGAAGAGAGAAGGGAGAAGGCGCTGGCGACGCGATGGTGGT
TGAGAAGGATACGGGCAAGGAGGGTGCGGTGTGGACAGGGGATGGAGGAG
AGACGGCTACGGTGAAATGCAAGCTTACGCCAAGCCAACAACTCAAGGTA
CGAGGCCGCCTGCAAGGTGTACCAACTGATGCATGCCCTTCATCCTCCTT
TTCAATCGCCCCCGATGGCTTGGGGTTCATCCGTTTGGTCAGCATTTTTT
TCCCGGCGTCCTCCTCCTCTTTGTCCTCCCCCCCAAGAGAAAAAGTTGGA
CATCTGGACCACGTAACCGCAGCCATGCAGACATTCCTCCTTGCCCCTGC
CGCGCACTCCTCTCCTCTTCAGTGA
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protein sequence of NO07G04680.1

>NO07G04680.1-protein ID=NO07G04680.1-protein|Name=NO07G04680.1|organism=Nannochloropsis oceanica|type=polypeptide|length=125bp
MSTRREKGEGAGDAMVVEKDTGKEGAVWTGDGGETATVKCKLTPSQQLKV
RGRLQGVPTDACPSSSFSIAPDGLGFIRLVSIFFPASSSSLSSPPREKVG
HLDHVTAAMQTFLLAPAAHSSPLQ*
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mRNA from alignment at chr7:1318660..1319494-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>NO07G04680.1 ID=NO07G04680.1|Name=NO07G04680.1|organism=Nannochloropsis oceanica|type=mRNA|length=835bp|location=Sequence derived from alignment at chr7:1318660..1319494- (Nannochloropsis oceanica)
ATGTCCACACGAAGAGAGAAGGGAGAAGGCGCTGGCGACGCGATGGTGGT
TGAGAAGGATACGGGCAAGGAGGGTGCGGTGTGGACAGGGGATGGTGAGG
ATGAGGGAGGCCGGGGAGGAAGAAAGATAGAGCGACACCCTTGCAGCTAA
ATGAATATATACCCTTGCATCTGCTCGCTTCCCTTTACCTCCTCACCCCG
CTAAGACACAGGCCCACCCTATTCCACGCGATGTAGGTCTTCCTACCCGT
GGCCTGCCCTCTCGTTCTTAACGTCCACATGGCAAGAAAAGGACCTATAT
TCAAGCACCTTCCACCTCTGATAGATAGAGGACGCCGGGTATGGCTCATC
GATAAGGAGGAGAGACGGCTACGGTGAAATGCAAGCTTACGCCAAGCCAA
CAACTCAAGGTACGAGGCCGCCTGCAAGGTACGTCCATCCCTCCCTCCCT
CCCACCTCCCTCCCCCCTTTCCTCTATCACTCCCTGCCGTTCTTCTCGAC
CTCCTCCCTCCCTCCCATTGCATAGTTTACTCGTGAACAAAGCCTTAGTA
TATAACTTTTCGGCATGGGTTGAGCTCATCCCTCTTCCCTTCCTCCCTCC
CTCCCTACCCCCCTCCCTCTTTTCAGGTGTACCAACTGATGCATGCCCTT
CATCCTCCTTTTCAATCGCCCCCGATGGCTTGGGGTTCATCCGTTTGGTC
AGCATTTTTTTCCCGGCGTCCTCCTCCTCTTTGTCCTCCCCCCCAAGAGA
AAAAGTTGGACATCTGGACCACGTAACCGCAGCCATGCAGACATTCCTCC
TTGCCCCTGCCGCGCACTCCTCTCCTCTTCAGTGA
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Coding sequence (CDS) from alignment at chr7:1318660..1319494-

>NO07G04680.1 ID=NO07G04680.1|Name=NO07G04680.1|organism=Nannochloropsis oceanica|type=CDS|length=375bp|location=Sequence derived from alignment at chr7:1318660..1319494- (Nannochloropsis oceanica)
ATGTCCACACGAAGAGAGAAGGGAGAAGGCGCTGGCGACGCGATGGTGGT
TGAGAAGGATACGGGCAAGGAGGGTGCGGTGTGGACAGGGGATGGAGGAG
AGACGGCTACGGTGAAATGCAAGCTTACGCCAAGCCAACAACTCAAGGTA
CGAGGCCGCCTGCAAGGTGTACCAACTGATGCATGCCCTTCATCCTCCTT
TTCAATCGCCCCCGATGGCTTGGGGTTCATCCGTTTGGTCAGCATTTTTT
TCCCGGCGTCCTCCTCCTCTTTGTCCTCCCCCCCAAGAGAAAAAGTTGGA
CATCTGGACCACGTAACCGCAGCCATGCAGACATTCCTCCTTGCCCCTGC
CGCGCACTCCTCTCCTCTTCAGTGA
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Synonyms
Publications