|
|
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| chr7 | genome | chr7:1156919..1158592 + |
Analyses
This mRNA is derived from or has results from the following analyses
Homology
The following BLAST results are available for this feature:
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >NO07G04160.1 ID=NO07G04160.1|Name=NO07G04160.1|organism=Nannochloropsis oceanica|type=mRNA|length=1674bp
CACCCTCTCGAATTTCGCCTCTCGTTTCTCACAGCTACTATCCTCTATCT
GTCATGCACATATTATACAGACAAATGGACATCCTCGTCCTTTGCCAAAT
TCTTCTCTATGCCCTTTTCCTTCCCACGCCTATCGCGGCTGACCTTGCCC
TTCTTCCCACCCGGGACGCCGCCCGAGGCATGAGTTGGGAGCAGCTCGAG
CACATTTTTAAGGAAAGCACGATTGACGAAGGTATCCCTGAAGGTTATTC
CTACGGCTATGCTCTTGTCAACCCCACCTTTTCGGGTGCCATCCAGGTGG
CTGCAGACATCTTTTGGAAAGGCAAGCGCCTCGAAGTCAAGTCAGGAGAG
AACTGCCACGGGCGAGACTGTGGGCAAATGGGGGTGGTGCTGAACTACCT
TGGAGCAAGCAACCGTGTCCAGTGGCAGGAAATGCCTGGTATTGCCTATA
TTGGTCAACTCAAGGACATCAAGTCTTCCCTCGAACCGCTACAGCTCGAT
GACAATCTCTCCATCATTGTCGATTATCAAAACGGTGGAGGCGATGAACT
TCGCCTGGTCAACAGCAAAGAGAGGATCTACCTCGGACGAGGGGTAGATT
GGGTGAGCCCGCAACTCTATGCGTACTTTGTCCTTCAATTCTACGACGTG
CCACAGAAAGTAGAGCTATCATTCGGCACGGCTCATTATCACCAGGCACG
AGAGAGGGCTTACCTTGCAGCAGGGGCAACTCAGGGGCCGGACCCGATGC
AGGTGGTGCAGGCGATACCAGATACAGGACGGGAGCGGGAGGGGGGCTTG
ATAACTAGAAAATCAGAAAAGGTTGCAGCGATTGGACTGCTTAGTGGGGG
TAAAACGACGACCATAGTGGGATCGGAGGCGCGCTTTCGGGGGAGCGGCG
GTAGAGGGGGTAAGGGAGGGGACTAAACTCTGAGTGGAAATAATGCAGGG
ATATTGTGAGGGGGAAAGCAGAGATTTCTAATCAGGAAACATTCGTATAA
TTACGATGACAGAGGGTAAAGGACGACTGGAATTCGGAAGATATACACGT
AAATAAGTATCATCATGGCAAGAAAAAAAAAGCCAGGGTCCACTCAGCGA
GCTCTTTTTCTGACGAGATTTCCATAAATTTAGCGCCTCGTCGTCCATCC
CTTGTGAAAACTTCATCCTTTCTGTCTTACTCAGCACCATCACAATGGTG
GGTCCGACGAGAAGGGAATGGCGAAGGTGAAGTAGGGGGGAGGAGGGTGT
TGTGAGGAAGAGCAGTCGCAGGATATGAGGGACGCGAAGCAACACTATGG
TGCTGCTGATCCTTGGAGAAATTAAGTCCATTATCACTAGCAGTCGTAAG
ATAGGTAGGGCATGGACGTGGAAAAATAAGTATACATCTATGCTCTCCGC
TGCAACTGTAGCTGCTGCTGCTGCTGCTGCTTCTACAGCTTCCGGTGTCA
TACCTTGCTGAGCAAGACCAAAAGTCGAAAGGCCGGTCATTTAATCGGAA
TATTTGATATTCATTTACTGCCTCAATGCTTTCAAACCTGTTGGAAGGCT
CGCAAAGAGGAAATCGCTCCCCAAAAATCGTCCGACCCCAACCAACGGCT
TTCTGCGGGCTCTAAAACCGACGTACTATGATAATTGCCACACACTCCCC
CTTTCATTTGGGCGGGGATTCGAG back to topprotein sequence of NO07G04160.1 >NO07G04160.1-protein ID=NO07G04160.1-protein|Name=NO07G04160.1|organism=Nannochloropsis oceanica|type=polypeptide|length=291bp
MHILYRQMDILVLCQILLYALFLPTPIAADLALLPTRDAARGMSWEQLEH
IFKESTIDEGIPEGYSYGYALVNPTFSGAIQVAADIFWKGKRLEVKSGEN
CHGRDCGQMGVVLNYLGASNRVQWQEMPGIAYIGQLKDIKSSLEPLQLDD
NLSIIVDYQNGGGDELRLVNSKERIYLGRGVDWVSPQLYAYFVLQFYDVP
QKVELSFGTAHYHQARERAYLAAGATQGPDPMQVVQAIPDTGREREGGLI
TRKSEKVAAIGLLSGGKTTTIVGSEARFRGSGGRGGKGGD* back to topmRNA from alignment at chr7:1156919..1158592+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >NO07G04160.1 ID=NO07G04160.1|Name=NO07G04160.1|organism=Nannochloropsis oceanica|type=mRNA|length=1674bp|location=Sequence derived from alignment at chr7:1156919..1158592+ (Nannochloropsis oceanica)
CACCCTCTCGAATTTCGCCTCTCGTTTCTCACAGCTACTATCCTCTATCT
GTCATGCACATATTATACAGACAAATGGACATCCTCGTCCTTTGCCAAAT
TCTTCTCTATGCCCTTTTCCTTCCCACGCCTATCGCGGCTGACCTTGCCC
TTCTTCCCACCCGGGACGCCGCCCGAGGCATGAGTTGGGAGCAGCTCGAG
CACATTTTTAAGGAAAGCACGATTGACGAAGGTATCCCTGAAGGTTATTC
CTACGGCTATGCTCTTGTCAACCCCACCTTTTCGGGTGCCATCCAGGTGG
CTGCAGACATCTTTTGGAAAGGCAAGCGCCTCGAAGTCAAGTCAGGAGAG
AACTGCCACGGGCGAGACTGTGGGCAAATGGGGGTGGTGCTGAACTACCT
TGGAGCAAGCAACCGTGTCCAGTGGCAGGAAATGCCTGGTATTGCCTATA
TTGGTCAACTCAAGGACATCAAGTCTTCCCTCGAACCGCTACAGCTCGAT
GACAATCTCTCCATCATTGTCGATTATCAAAACGGTGGAGGCGATGAACT
TCGCCTGGTCAACAGCAAAGAGAGGATCTACCTCGGACGAGGGGTAGATT
GGGTGAGCCCGCAACTCTATGCGTACTTTGTCCTTCAATTCTACGACGTG
CCACAGAAAGTAGAGCTATCATTCGGCACGGCTCATTATCACCAGGCACG
AGAGAGGGCTTACCTTGCAGCAGGGGCAACTCAGGGGCCGGACCCGATGC
AGGTGGTGCAGGCGATACCAGATACAGGACGGGAGCGGGAGGGGGGCTTG
ATAACTAGAAAATCAGAAAAGGTTGCAGCGATTGGACTGCTTAGTGGGGG
TAAAACGACGACCATAGTGGGATCGGAGGCGCGCTTTCGGGGGAGCGGCG
GTAGAGGGGGTAAGGGAGGGGACTAAACTCTGAGTGGAAATAATGCAGGG
ATATTGTGAGGGGGAAAGCAGAGATTTCTAATCAGGAAACATTCGTATAA
TTACGATGACAGAGGGTAAAGGACGACTGGAATTCGGAAGATATACACGT
AAATAAGTATCATCATGGCAAGAAAAAAAAAGCCAGGGTCCACTCAGCGA
GCTCTTTTTCTGACGAGATTTCCATAAATTTAGCGCCTCGTCGTCCATCC
CTTGTGAAAACTTCATCCTTTCTGTCTTACTCAGCACCATCACAATGGTG
GGTCCGACGAGAAGGGAATGGCGAAGGTGAAGTAGGGGGGAGGAGGGTGT
TGTGAGGAAGAGCAGTCGCAGGATATGAGGGACGCGAAGCAACACTATGG
TGCTGCTGATCCTTGGAGAAATTAAGTCCATTATCACTAGCAGTCGTAAG
ATAGGTAGGGCATGGACGTGGAAAAATAAGTATACATCTATGCTCTCCGC
TGCAACTGTAGCTGCTGCTGCTGCTGCTGCTTCTACAGCTTCCGGTGTCA
TACCTTGCTGAGCAAGACCAAAAGTCGAAAGGCCGGTCATTTAATCGGAA
TATTTGATATTCATTTACTGCCTCAATGCTTTCAAACCTGTTGGAAGGCT
CGCAAAGAGGAAATCGCTCCCCAAAAATCGTCCGACCCCAACCAACGGCT
TTCTGCGGGCTCTAAAACCGACGTACTATGATAATTGCCACACACTCCCC
CTTTCATTTGGGCGGGGATTCGAG back to topCoding sequence (CDS) from alignment at chr7:1156919..1158592+ >NO07G04160.1 ID=NO07G04160.1|Name=NO07G04160.1|organism=Nannochloropsis oceanica|type=CDS|length=873bp|location=Sequence derived from alignment at chr7:1156919..1158592+ (Nannochloropsis oceanica)
ATGCACATATTATACAGACAAATGGACATCCTCGTCCTTTGCCAAATTCT
TCTCTATGCCCTTTTCCTTCCCACGCCTATCGCGGCTGACCTTGCCCTTC
TTCCCACCCGGGACGCCGCCCGAGGCATGAGTTGGGAGCAGCTCGAGCAC
ATTTTTAAGGAAAGCACGATTGACGAAGGTATCCCTGAAGGTTATTCCTA
CGGCTATGCTCTTGTCAACCCCACCTTTTCGGGTGCCATCCAGGTGGCTG
CAGACATCTTTTGGAAAGGCAAGCGCCTCGAAGTCAAGTCAGGAGAGAAC
TGCCACGGGCGAGACTGTGGGCAAATGGGGGTGGTGCTGAACTACCTTGG
AGCAAGCAACCGTGTCCAGTGGCAGGAAATGCCTGGTATTGCCTATATTG
GTCAACTCAAGGACATCAAGTCTTCCCTCGAACCGCTACAGCTCGATGAC
AATCTCTCCATCATTGTCGATTATCAAAACGGTGGAGGCGATGAACTTCG
CCTGGTCAACAGCAAAGAGAGGATCTACCTCGGACGAGGGGTAGATTGGG
TGAGCCCGCAACTCTATGCGTACTTTGTCCTTCAATTCTACGACGTGCCA
CAGAAAGTAGAGCTATCATTCGGCACGGCTCATTATCACCAGGCACGAGA
GAGGGCTTACCTTGCAGCAGGGGCAACTCAGGGGCCGGACCCGATGCAGG
TGGTGCAGGCGATACCAGATACAGGACGGGAGCGGGAGGGGGGCTTGATA
ACTAGAAAATCAGAAAAGGTTGCAGCGATTGGACTGCTTAGTGGGGGTAA
AACGACGACCATAGTGGGATCGGAGGCGCGCTTTCGGGGGAGCGGCGGTA
GAGGGGGTAAGGGAGGGGACTAA back to top
|