NO07G02910.1, NO07G02910.1 (mRNA) Nannochloropsis oceanica

Overview
NameNO07G02910.1
Unique NameNO07G02910.1
TypemRNA
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length5294
Alignment locationchr7:818964..824386 -

Link to JBrowse

Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr7genomechr7:818964..824386 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. oceanica IMET12017-10-24
Homology annotation for N. oceanica IMET12017-10-25
InterPro analysis for N. oceanica IMET12017-10-25
Annotated Terms
Homology
BLAST of NO07G02910.1 vs.
Match: EWM27098.1 (lipase family protein [Nannochloropsis gaditana])

HSP 1 Score: 615.1 bits (1585), Expect = 1.900e-172
Identity = 327/524 (62.40%), Postives = 382/524 (72.90%), Query Frame = 0
Query:    3 PSDASGCVCLALLLVAIATTAAP-APLSGAPAES--DTSSSIPNVRGASPPGSSSQTQKLTSQSSPKDIGWTWPSWDSRKNNASGTAASAITDNENIDYSDYTRKNGAATAPAGEYPACFIQASMNKDGLICMAGSGWLALTQLLPPQLGSGAEVRAPVDPNKELPRLLAKIPMPLPAIVPAALSKAERPTYYFMYRTILNFYAAVGL-----GGVGGSGAMLDLGLPAEWTNQREYTLQNTNSVIAGVLQQQVPFAVSYTRGDEMLVVVRGTIYPAEWQRDFQYQHAKPSETAPFKFPGNVHAGFFAVFKDLAELLIDEEIKTRAPKKVTFTGHSLGGSVAALLAFYASMFVATT--ELISFGAPNVGDATFSEAFNVRVNNRHLAFSGVGSREGSYLIGDWIAQVPCGAVTTCPLLTEMSSINLGQQQQQQQQEVQVQQEEVSYDYTALGGAVPFTPADMLNNLTWATRSDVTSFRYSPVASHVCSYLCFTAPSVGDDYNQCVFTLEM-SDVDMNKRCVINL 516
            P     C+CL +L +   + A P AP  GAPAES   T +S  N+RGA  P  SSQT       SP+D+GWTWPSW         TA        +I+YS+YTR++G +T  A E+PAC IQA++N+DGLIC+AGS WLALTQ LPPQLG G+++R PVDP +ELP+ L  + MPLPA+VP    +AE+PTYYF+YR I N YAAVG      G       ML+L LP  WTNQREYTL+ T S++AGVLQ Q PFAVS+TR  EMLVVVRGTIY AEWQR+FQYQHA P+ETA ++ PG VHAGFFAVFKDLAE L+D+EIK +AP KVTFTGHSLGGSV ALLAFY +  +  T  EL+SFGAPNVGDATFS AFN RV NRHLAFSGVGS   SY IGDWI+QVPCGAVTTCPLLTEMSS++L      Q+Q  +      SY YTALGG+VPFTPA M N  TWA RSDV  FRYSPVA+H CSY+CFTAPSVGD Y+QCVFTLE+ S VDM+KRC INL
Sbjct:    4 PPSGRACLCLVVLYLIGTSLAIPDAPFPGAPAESAPSTGTSTSNIRGA--PFQSSQT-------SPQDVGWTWPSWGDPWGTGGSTAQPT-----SINYSNYTRQHGTSTTSASEFPACSIQAALNEDGLICLAGSLWLALTQTLPPQLGWGSKIRPPVDPLRELPQPLEVLSMPLPALVPTEKVEAEKPTYYFLYRAIQNLYAAVGANARSRGTDSAQEPMLNLALPPAWTNQREYTLRWTGSLVAGVLQPQAPFAVSFTRDKEMLVVVRGTIYSAEWQRNFQYQHADPTETAAYRMPGGVHAGFFAVFKDLAEALVDDEIKRQAPSKVTFTGHSLGGSVGALLAFYTTHVLPRTQVELVSFGAPNVGDATFSSAFNARVRNRHLAFSGVGSEGDSYFIGDWISQVPCGAVTTCPLLTEMSSVDLNGSPSGQRQANE------SYSYTALGGSVPFTPAQMQNGRTWALRSDVAGFRYSPVAAHTCSYMCFTAPSVGDAYDQCVFTLELGSSVDMDKRCAINL 507          
The following BLAST results are available for this feature:
BLAST of NO07G02910.1 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 1
Match NameE-valueIdentityDescription
EWM27098.11.900e-17262.40lipase family protein [Nannochloropsis gaditana][more]
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
NO07G02910NO07G02910Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
NO07G02910.1NO07G02910.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
NO07G02910.1.cds1NO07G02910.1.cds1Nannochloropsis oceanica (N. oceanica IMET1)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>NO07G02910.1 ID=NO07G02910.1|Name=NO07G02910.1|organism=Nannochloropsis oceanica|type=mRNA|length=5294bp
TCCCCGGTATACGCGACCTCTCGTCTCTTATTTATCTTTCGTTCCCTTTC
CTTCTGTCGATCCTTCTCTCAAGGGCGTGCACGTTTTCTTCACTTGCTTG
CCTTTCACTTCCTCCCACACTCGCTCGTATTCTTTCTGCCTCTCTCTCCT
TCTCTCTTTTCGGTTTTATCCATCCCACTTCTTTTCTCGAAACTATATAT
AAATCTCGGGGTAAAATTTTAACCGTCTCTCCAGGAGTGTGGGATCATTC
ATCCTCCTCTTCTCCTCCTTCTCTTGCAGCTGCCGATGCTGCTGTTTACG
CGGATGCGCTTGCTCATCTTGCCTCGGCGCCTGTCTCTGTTTCCACGCTC
TTTCGCGCTCTCCTTTTCGTGTCCTACCTTCTACACTATTGTGGGGGTTC
TCTTCTCTTCTTAACTTTTTTAAATGCTCTCGATTGCGTTTCTTGGATTT
GGCGGTTTCCTCGTCAAAATGTTAATATCTAGCACACTGTCCTTTCCGTG
GTCGCATAAGATGAAATAGTTTAACAAGATTACTACTAGTATAATATATT
CTCTCTCCCTCCATATCTCTTTCATCTCTGTCAATTCAGTCTCTCACACC
CTAATACAACCCCCCTCGGAACGTCTCCAGCTCAGCCTGCGGACTAAACC
TCCCAATACCTTCAGTTATCTGATTCCTGAAACTATTAATCTCCGCCTCC
CTCAACGACCGCTGCGTCTGGTTCTCTCTCTCCTCCTCCTCCTCCCTCTG
CCTCTGCCTTAACGCCTCCGCGCTCTCTCTGTCTCGGAAATTGGTTTCCC
TCCCTTGCTCCCTGAAAACATTCTCCCTCACTGTTTCCCGACCCACGGGC
ATCGGGAACGATCTAGTATCCACATCTTCCGACGACATCCTCCCATATCC
ACCCTCTCTAAATCCCTGCTGCTGCTGCTGCTGCTGCTGCTGATGCTGTT
GTTGAGGCTGTTGCGGCTGTTGTTGAAACTGTCCACGGTCGGTCGCGCCA
TTCATCGCCGTTCTCATGCTGCTGATCTCTCGCTGCACATAAGCCTTCAA
CGAATCCACCTCCTGCTGCGACGGGGCGGAAGAGGCGGCTTTGGAGCCTT
GCTGCTGCATATGCATTCGCAATCCGTCGACCTGCTGCTGGAACTCTGCG
CGCAATGCCTCGATTTCCTGCTCAGGGGAGACATAACTCAAGTCTTCTTT
CCCGCCACCGACAATGGAGTGGCCAAGAAAGCCGTCTGCAGAGCCGGGGG
CTCCGCCCTTCCGACGCGGCGTTCTGGGGGTGCGAGGGGTCGGGGGGTAG
AAGAGATGGGGTTGGCTGTCGGGATCGGCGTAGACAAGGTTGTATTGCTG
GGAGAAATTCTGGCCGATGATGGTGATGGGCAGGGCGAGGGATAGGAGGC
CAAAGTACGCGATAAAACAGGAGGCAATCCGTCCGCCGGTGGTGGTGGGG
AAGAGGGCGGCATTGCCGAGTGTGGTTGTATTCACGATATACCAATAGAT
GCCCATTATAATGGACGTAAACGGCGATTGTTCCAGGGCCGTGTTTCGTG
CATTGGGTCTCAGGAAACCACCAGATGGAAACTCCAAAGTGACGCTATAA
ACCCCTCCTTCAAAGTAGTACATGATTGAGCCGAAAGTCACTGCCATGAC
CGTCGTCAAAAAGACGAAGATAAGCAAGGCAGGAAGGGAGGCGCGGAGCG
TTCTGGAGATGATTGCACCAGCTTCCCTAAAACGCCGCCCTAGCTTGAAG
ATTAGCAGAAACCGCAGGAAGCGGAAAATGCGGAGGAAAGTATAGGATCC
GCCGGCGAAGAGGGAGATGTAGTAGGGGACGATGGAGACAACGTCGATGA
TATTAAGGCCTGACGTCACATACTTGGTCACCTTCTGACAGGTTGACATA
CGGTAGTAGCGCGAGCGGTCCTTAAGGCGCCCGTCGATGGTGTACTCGAG
GGAGCGAGGGAAGACCAGATCGACGGGCACAGGGGGCACGCAAAACACAC
GCAGTACGTAGTCGATGGTGAAGATAATGATGGTAATAAGCTCCAACATC
CATGTAGTGCGGTTTTCCAGAGGTCGGCAGACGACTTCAGGACACACTGT
GTCGGGTCCGGGGGTGCAGATTGGGTTCGCGCAAGAGGTCGGGTACCGTA
AGACGGAAGGGACGGTGCTGCTGATGAAGGCGAGTGAGTTGAGAAGGATG
CAGCCCACGAGAAAGATAGAGATGTACCATGCAAGCCGACTTGAGCGGGG
ATGCTCCAAGGTGACGAATGTCAGGACACGCATGGCATTGAATTGGTCGG
AAAAGGTGCTGTCTTGGTAGGCCAGGACTTGCTTGGCTTCCCGCACGATC
TTCCTGGACTGCTTCTCCTCGGTGCGATGAGCTTCACCAATCGTGATGTT
CATACCTTTGCCGCTACTATTGTACGGTGGGGTGGACGCCTGCACCTCCG
TGTGGCCTGCCATGGCTTGAGGTTTGGGCTAGGTAGCGGGCAAGGGAAGA
GGGTGTTGCCGGCGCCTGAGGAGTGGTGGGGGTGAAAGGGATGGGGAATG
GGGAATGGGGAGTGGGGAGTGGGGAGGCGTGTGGTTGGTAGGTGGATGAT
ATTTTCGTGGCTGTGTGTAATCGTCTTATATAATGCTCTCCATCACTTAG
TTGACGTGCCGGCCATTTCGATCCACCCGTGGCTAATGTATATGCTTGTG
CTGGTGCATTTTTCGGGCTTGAACCACACACGATCCCTGAACGTCATCGT
GTCAAATCCGCTCTCACGAAAATAGGCCCCGGGGGTGATCGTGGAAAGGC
AACGACTGGTTGCTGAATGAGACAAGCACAACAAGAAAAGGGTGCATCAC
GAGAGCCACCCAGGTGGACAAGGACGCATATTCGCACAATTCAGGAAGAG
CTCCAAGTTGCCGCTGCTCTTCAACGCAAGGAAGAGCGACGAGCAGCGAC
GCCATTAGTCTGGCGTATTTTGTACTTTCCTCGGCTGAAGCCAAAGCCAC
CGGTAGCATTAGAAGGTGTATAATGTACATATACTTGCGTGCGTCTGCGG
TTCATTTGATTTTAGCGGAGACCAACTCAGTTGGGTGGCTAACAAGGGAC
GTGCATCCCTTGTGTGTGCGGGGATGCCATGACTGTTTTTTTTCGACAAA
CGGGAAATCGTCGATTTCCCTTCCGATCGGATGAGCGATGATGTTAATTG
TGGGGCCTCTCTCAGATGACACGATCATGTTTATATTTCATGTTTGTTTT
GCGCGTTAGCCGGAATCCAAGTGTGTTTCTTGACGACGAAGCCTACACAC
TCATACCGAATCCCCTTTCCCCGACCTCCCCACCCTCAAACCCGCGGCCC
AGGTGCTACAGAACACACAGAACCGCCCCATTCTCGAGCTTTGGTTATGT
GTCCTTCAGATGCCAGTGGATGCGTTTGTCTGGCTTTGCTCCTCGTCGCA
ATTGCCACAACAGCCGCCCCTGCGCCCTTATCTGGAGCGCCTGCCGAAAG
CGATACCTCCAGCAGCATCCCGAATGTGCGCGGCGCTTCTCCCCCCGGAT
CGTCGTCACAGACACAGAAGCTGACATCGCAATCATCGCCTAAAGACATT
GGCTGGACCTGGCCGTCGTGGGATAGCAGAAAAAACAATGCCAGCGGTAC
CGCCGCCAGCGCCATTACAGACAACGAGAACATTGATTATTCAGACTACA
CAAGAAAGAATGGTGCGGCAACCGCGCCCGCCGGAGAGTATCCCGCTTGT
TTCATCCAAGCGTCCATGAACAAGGATGGCTTAATCTGCATGGCGGGCTC
CGGCTGGCTGGCATTGACCCAGCTTTTACCCCCTCAATTGGGCTCGGGGG
CGGAGGTCCGTGCTCCTGTCGATCCAAACAAGGAACTCCCCCGGCTCTTG
GCCAAGATCCCTATGCCCTTGCCCGCCATTGTGCCAGCGGCACTAAGCAA
GGCAGAGAGACCCACATACTACTTCATGTATCGAACCATTTTGAATTTTT
ACGCGGCTGTTGGCTTGGGCGGCGTGGGCGGCAGCGGCGCGATGCTGGAC
TTAGGTCTGCCGGCAGAATGGACCAATCAGAGGGAGTACACCTTGCAGAA
CACCAACAGCGTGATTGCCGGAGTCCTGCAGCAACAGGTGCCGTTTGCTG
TGAGCTATACGAGAGGGGATGAAATGCTCGTGGTGGTGCGGGGTACGATT
TATCCAGCAGAGTGGCAACGTGATTTTCAGTACCAGCATGCAAAGCCCTC
CGAGACAGCGCCTTTCAAATTTCCGGGTAACGTGCACGCGGGTTTCTTTG
CTGTTTTCAAAGATTTGGCAGAGCTGTTGATCGATGAGGAGATTAAGACA
CGCGCGCCTAAGAAGGTGACGTTTACAGGGCATTCCCTGGGGGGGTCGGT
GGCGGCATTGCTAGCGTTCTACGCAAGTATGTTCGTCGCGACCACGGAGT
TAATTTCGTTCGGAGCCCCCAATGTGGGCGATGCAACGTTTTCTGAGGCT
TTCAATGTCAGGGTGAACAATCGGCATTTGGCCTTTTCAGGGGTGGGCAG
TCGCGAGGGTTCTTACTTGATTGGTGATTGGATCGCCCAGGTACCTTGTG
GGGCGGTCACGACCTGCCCGCTGCTGACGGAGATGAGCTCAATAAATCTT
GGTCAGCAACAGCAGCAGCAGCAGCAAGAGGTTCAGGTGCAGCAGGAAGA
AGTGTCGTATGACTATACAGCTCTGGGCGGGGCAGTCCCATTTACGCCTG
CGGATATGTTAAACAATTTGACATGGGCGACCCGCTCCGACGTGACGAGC
TTTCGGTATTCACCCGTGGCGTCTCATGTGTGTAGTTATTTGTGTTTTAC
TGCTCCATCGGTGGGGGATGATTATAATCAATGTGTGTTTACGCTGGAGA
TGAGTGACGTGGATATGAATAAGCGATGTGTGATAAACTTGTAATTGAGG
GAGGAAGGTAGGAAGAGGATGTTGAGAAGGGGTTGTGGCCTGAGAGTCGG
AACAGCGGGAGTGTGCGTTCAGAGTACAAGTTGTCTTGTGCTTGTTTGTA
CACATTTCCAAGACCCTGCTCGGAGATGTACCTAGGTGGTTGGGCTACGT
GTTGCATTGAGGAAAGTCAAAAAGTTAATTGGCTGAAAAGGAAAAGCGGA
AAGTTTTCGACACTCTAAACAGTAACATACCGCGCGCAAAGCAAATGAAA
AGGGTGACTATTGCTCTTTGGAAGCGATAGAGCACGCAAAGTTAAAAAAA
CTTAACGACGACGAAAAGTAAGAATGAACGAGAAGGGTGCTGCG
back to top

protein sequence of NO07G02910.1

>NO07G02910.1-protein ID=NO07G02910.1-protein|Name=NO07G02910.1|organism=Nannochloropsis oceanica|type=polypeptide|length=516bp
MCPSDASGCVCLALLLVAIATTAAPAPLSGAPAESDTSSSIPNVRGASPP
GSSSQTQKLTSQSSPKDIGWTWPSWDSRKNNASGTAASAITDNENIDYSD
YTRKNGAATAPAGEYPACFIQASMNKDGLICMAGSGWLALTQLLPPQLGS
GAEVRAPVDPNKELPRLLAKIPMPLPAIVPAALSKAERPTYYFMYRTILN
FYAAVGLGGVGGSGAMLDLGLPAEWTNQREYTLQNTNSVIAGVLQQQVPF
AVSYTRGDEMLVVVRGTIYPAEWQRDFQYQHAKPSETAPFKFPGNVHAGF
FAVFKDLAELLIDEEIKTRAPKKVTFTGHSLGGSVAALLAFYASMFVATT
ELISFGAPNVGDATFSEAFNVRVNNRHLAFSGVGSREGSYLIGDWIAQVP
CGAVTTCPLLTEMSSINLGQQQQQQQQEVQVQQEEVSYDYTALGGAVPFT
PADMLNNLTWATRSDVTSFRYSPVASHVCSYLCFTAPSVGDDYNQCVFTL
EMSDVDMNKRCVINL*
back to top

mRNA from alignment at chr7:818964..824386-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>NO07G02910.1 ID=NO07G02910.1|Name=NO07G02910.1|organism=Nannochloropsis oceanica|type=mRNA|length=5423bp|location=Sequence derived from alignment at chr7:818964..824386- (Nannochloropsis oceanica)
TCCCCGGTATACGCGACCTCTCGTCTCTTATTTATCTTTCGTTCCCTTTC CTTCTGTCGATCCTTCTCTCAAGGGCGTGCACGTTTTCTTCACTTGCTTG CCTTTCACTTCCTCCCACACTCGCTCGTATTCTTTCTGCCTCTCTCTCCT TCTCTCTTTTCGGTTTTATCCATCCCACTTCTTTTCTCGAAACTATATAT AAATCTCGGGGTAAAATTTTAACCGTCTCTCCAGGAGTGTGGGATCATTC ATCCTCCTCTTCTCCTCCTTCTCTTGCAGCTGCCGATGCTGCTGTTTACG CGGATGCGCTTGCTCATCTTGCCTCGGCGCCTGTCTCTGTTTCCACGCTC TTTCGCGCTCTCCTTTTCGTGTCCTACCTTCTACACTATTGTGGGGGTTC TCTTCTCTTCTTAACTTTTTTAAATGCTCTCGATTGCGTTTCTTGGATTT GGCGGTTTCCTCGTCAAAATGTTAATATCTAGCACACTGTCCTTTCCGTG GTCGCATAAGATGAAATAGTTTAACAAGATTACTACTAGTATAATATATT CTCTCTCCCTCCATATCTCTTTCATCTCTGTCAATTCAGTCTCTCACACC CTAATACAACCCCCCTCGGAACGTCTCCAGCTCAGCCTGCGGACTAAACC TCCCAATACCTTCAGTTATCTGATTCCTGAAACTATTAATCTCCGCCTCC CTCAACGACCGCTGCGTCTGGTTCTCTCTCTCCTCCTCCTCCTCCCTCTG CCTCTGCCTTAACGCCTCCGCGCTCTCTCTGTCTCGGAAATTGGTTTCCC TCCCTTGCTCCCTGAAAACATTCTCCCTCACTGTTTCCCGACCCACGGGC ATCGGGAACGATCTAGTATCCACATCTTCCGACGACATCCTCCCATATCC ACCCTCTCTAAATCCCTGCTGCTGCTGCTGCTGCTGCTGCTGATGCTGTT GTTGAGGCTGTTGCGGCTGTTGTTGAAACTGTCCACGGTCGGTCGCGCCA TTCATCGCCGTTCTCATGCTGCTGATCTCTCGCTGCACATAAGCCTTCAA CGAATCCACCTCCTGCTGCGACGGGGCGGAAGAGGCGGCTTTGGAGCCTT GCTGCTGCATATGCATTCGCAATCCGTCGACCTGCTGCTGGAACTCTGCG CGCAATGCCTCGATTTCCTGCTCAGGGGAGACATAACTCAAGTCTTCTTT CCCGCCACCGACAATGGAGTGGCCAAGAAAGCCGTCTGCAGAGCCGGGGG CTCCGCCCTTCCGACGCGGCGTTCTGGGGGTGCGAGGGGTCGGGGGGTAG AAGAGATGGGGTTGGCTGTCGGGATCGGCGTAGACAAGGTTGTATTGCTG GGAGAAATTCTGGCCGATGATGGTGATGGGCAGGGCGAGGGATAGGAGGC CAAAGTACGCGATAAAACAGGAGGCAATCCGTCCGCCGGTGGTGGTGGGG AAGAGGGCGGCATTGCCGAGTGTGGTTGTATTCACGATATACCAATAGAT GCCCATTATAATGGACGTAAACGGCGATTGTTCCAGGGCCGTGTTTCGTG CATTGGGTCTCAGGAAACCACCAGATGGAAACTCCAAAGTGACGCTATAA ACCCCTCCTTCAAAGTAGTACATGATTGAGCCGAAAGTCACTGCCATGAC CGTCGTCAAAAAGACGAAGATAAGCAAGGCAGGAAGGGAGGCGCGGAGCG TTCTGGAGATGATTGCACCAGCTTCCCTAAAACGCCGCCCTAGCTTGAAG ATTAGCAGAAACCGCAGGAAGCGGAAAATGCGGAGGAAAGTATAGGATCC GCCGGCGAAGAGGGAGATGTAGTAGGGGACGATGGAGACAACGTCGATGA TATTAAGGCCTGACGTCACATACTTGGTCACCTTCTGACAGGTTGACATA CGGTAGTAGCGCGAGCGGTCCTTAAGGCGCCCGTCGATGGTGTACTCGAG GGAGCGAGGGAAGACCAGATCGACGGGCACAGGGGGCACGCAAAACACAC GCAGTACGTAGTCGATGGTGAAGATAATGATGGTAATAAGCTCCAACATC CATGTAGTGCGGTTTTCCAGAGGTCGGCAGACGACTTCAGGACACACTGT GTCGGGTCCGGGGGTGCAGATTGGGTTCGCGCAAGAGGTCGGGTACCGTA AGACGGAAGGGACGGTGCTGCTGATGAAGGCGAGTGAGTTGAGAAGGATG CAGCCCACGAGAAAGATAGAGATGTACCATGCAAGCCGACTTGAGCGGGG ATGCTCCAAGGTGACGAATGTCAGGACACGCATGGCATTGAATTGGTCGG AAAAGGTGCTGTCTTGGTAGGCCAGGACTTGCTTGGCTTCCCGCACGATC TTCCTGGACTGCTTCTCCTCGGTGCGATGAGCTTCACCAATCGTGATGTT CATACCTTTGCCGCTACTATTGTACGGTGGGGTGGACGCCTGCACCTCCG TGTGGCCTGCCATGGCTTGAGGTTTGGGCTAGGTAGCGGGCAAGGGAAGA GGGTGTTGCCGGCGCCTGAGGAGTGGTGGGGGTGAAAGGGATGGGGAATG GGGAATGGGGAGTGGGGAGTGGGGAGGCGTGTGGTTGGTAGGTGGATGAT ATTTTCGTGGCTGTGTGTAATCGTCTTATATAATGCTCTCCATCACTTAG TTGACGTGCCGGCCATTTCGATCCACCCGTGGCTAATGTATATGCTTGTG CTGGTGCATTTTTCGGGCTTGAACCACACACGATCCCTGAACGTCATCGT GTCAAATCCGCTCTCACGAAAATAGGCCCCGGGGGTGATCGTGGAAAGGC AACGACTGGTTGCTGAATGAGACAAGCACAACAAGAAAAGGGTGCATCAC GAGAGCCACCCAGGTGGACAAGGACGCATATTCGCACAATTCAGGAAGAG CTCCAAGTTGCCGCTGCTCTTCAACGCAAGGAAGAGCGACGAGCAGCGAC GCCATTAGTCTGGCGTATTTTGTACTTTCCTCGGCTGAAGCCAAAGCCAC CGGTAGCATTAGAAGGTGTATAATGTACATATACTTGCGTGCGTCTGCGG TTCATTTGATTTTAGCGGAGACCAACTCAGTTGGGTGGCTAACAAGGGAC GTGCATCCCTTGTGTGTGCGGGGATGCCATGACTGTTTTTTTTCGACAAA CGGGAAATCGTCGATTTCCCTTCCGATCGGATGAGCGATGATGTTAATTG TGGGGCCTCTCTCAGATGACACGATCATGTTTATATTTCATGTTTGTTTT GCGCGTTAGCCGGAATCCAAGTGTGTTTCTTGACGACGAAGCCTACACAC TCATACCGAATCCCCTTTCCCCGACCTCCCCACCCTCAAACCCGCGGCCC AGGTGCTACAGAACACACAGAACCGCCCCATTCTCGAGCTTTGGTTATGT GTCCTTCAGATGCCAGTGGATGCGTTTGTCTGGCTTTGCTCCTCGTCGCA ATTGCCACAACAGCCGCCCCTGCGCCCTTATCTGGAGCGCCTGCCGAAAG CGATACCTCCAGCAGCATCCCGAATGTGCGCGGCGCTTCTCCCCCCGGAT CGTCGTCACAGACACAGAAGCTGACATCGCAATCATCGCCTAAAGACATT GGCTGGACCTGGCCGTCGTGGGATAGCAGAAAAAACAATGCCAGCGGTAC CGCCGCCAGCGCCATTACAGACAACGAGAACATTGATTATTCAGACTACA CAAGAAAGAATGGTGCGGCAACCGCGCCCGCCGGAGAGTATCCCGCTTGT TTCATCCAAGCGTCCATGAACAAGGATGGCTTAATCTGCATGGCGGGCTC CGGCTGGCTGGCATTGACCCAGCTTTTACCCCCTCAATTGGGCTCGGGGG CGGAGGTCCGTGCTCCTGTCGATCCAAACAAGGAACTCCCCCGGCTCTTG GCCAAGATCCCTATGCCCTTGCCCGCCATTGTGCCAGCGGCACTAAGCAA GGCAGAGAGACCCACATACTACTTCATGTATCGAACCATTTTGAATTTTT ACGCGGCTGTTGGCTTGGGCGGCGTGGGCGGCAGCGGCGCGATGCTGGAC TTAGGTCTGCCGGCAGAATGGACCAATCAGAGGGAGTACACCTTGCAGAA CACCAACAGCGTGATTGCCGGAGTCCTGCAGCAACAGGTGCCGTTTGCTG TGAGCTATACGAGAGGGGATGAAATGCTCGTGGTGGTGCGGGGTACGATT TATCCAGCAGAGTGGCAACGTGATTTTCAGTACCAGCATGCAAAGCCCTC CGAGACAGCGCCTTTCAAATTTCCGGGTAACGTGCACGCGGGTTTCTTTG CTGTTTTCAAAGATTTGGCAGAGCTGTTGATCGATGAGGAGATTAAGACA CGCGCGCCTAAGAAGGTGACGTTTACAGGGCATTCCCTGGGGGGGTCGGT GGCGGCATTGCTAGCGTTCTACGCAAGTATGTTCGTCGCGACCACGGAGT TAATTTCGTTCGGAGCCCCCAATGTGGGCGATGCAACGTTTTCTGAGGCT TTCAATGTCAGGGTGAACAATCGGCATTTGGCCTTTTCAGGGGTGGGCAG TCGCGAGGGTTCTTACTTGATTGGTGATTGGATCGCCCAGGTACCTTGTG GGGCGGTCACGACCTGCCCGCTGCTGACGGAGATGAGCTCAATAAATCTT GGTCAGCAACAGCAGCAGCAGCAGCAAGAGGTTCAGGTGCAGCAGGAAGA AGTGTCGTATGACTATACAGCTCTGGGCGGGGCAGTCCCATTTACGCCTG CGGATATGTTAAACAATTTGACATGGGCGACCCGCTCCGACGTGACGAGC TTTCGGTATTCACCCGTGGCGTCTCATGTGTGTAGTTATTTGTGTTTTAC TGCTCCATCGGTGGGGGATGATTATAATCAATGTGTGTTTACGCTGGAGA TGAGTGACGTGGATATGAATAAGCGATGTGTGATAAACTTGTAATTGAGG GAGGAAGGTAGGAAGAGGATGTTGAGAAGGGGTTGTGGCCTGAGAGTCGG AACAGCGGGAGTGTGCGTTCAGAGTACAAGTTGTCTTGTGCTTGTTTGTA CACATTTCCAAGACCCTGCTCGGAGATGTACCTAGGTGGTTGGGCTACGT GTTGCATTGAGGAAAGTCAAAAAGTTAATTGGCTGAAAAGGAAAAGCGGA AAGTTTTCGACACTCTAAACAGTAACATACCGCGCGCAAAGCAAATGAAA AGGGTGACTATTGCTCTTTGGAAGCGATAGAGCACGCAAAGTTAAAAAAA CTTAACGACGACGAAAAGTAAGAATGAACGAGAAGGTATACTCTCGCTCA GATAAAAATAAATCAATTTTACTTTTGTCCTTCCCTCCTCTCCTCCCTCT TACTTTCCAAACTATGCCAGCGCCCCAATCTCATACTCGGCAATCACATC CCACACACTTACAGGGTGCTGCG
back to top

Coding sequence (CDS) from alignment at chr7:818964..824386-

>NO07G02910.1 ID=NO07G02910.1|Name=NO07G02910.1|organism=Nannochloropsis oceanica|type=CDS|length=1548bp|location=Sequence derived from alignment at chr7:818964..824386- (Nannochloropsis oceanica)
ATGTGTCCTTCAGATGCCAGTGGATGCGTTTGTCTGGCTTTGCTCCTCGT
CGCAATTGCCACAACAGCCGCCCCTGCGCCCTTATCTGGAGCGCCTGCCG
AAAGCGATACCTCCAGCAGCATCCCGAATGTGCGCGGCGCTTCTCCCCCC
GGATCGTCGTCACAGACACAGAAGCTGACATCGCAATCATCGCCTAAAGA
CATTGGCTGGACCTGGCCGTCGTGGGATAGCAGAAAAAACAATGCCAGCG
GTACCGCCGCCAGCGCCATTACAGACAACGAGAACATTGATTATTCAGAC
TACACAAGAAAGAATGGTGCGGCAACCGCGCCCGCCGGAGAGTATCCCGC
TTGTTTCATCCAAGCGTCCATGAACAAGGATGGCTTAATCTGCATGGCGG
GCTCCGGCTGGCTGGCATTGACCCAGCTTTTACCCCCTCAATTGGGCTCG
GGGGCGGAGGTCCGTGCTCCTGTCGATCCAAACAAGGAACTCCCCCGGCT
CTTGGCCAAGATCCCTATGCCCTTGCCCGCCATTGTGCCAGCGGCACTAA
GCAAGGCAGAGAGACCCACATACTACTTCATGTATCGAACCATTTTGAAT
TTTTACGCGGCTGTTGGCTTGGGCGGCGTGGGCGGCAGCGGCGCGATGCT
GGACTTAGGTCTGCCGGCAGAATGGACCAATCAGAGGGAGTACACCTTGC
AGAACACCAACAGCGTGATTGCCGGAGTCCTGCAGCAACAGGTGCCGTTT
GCTGTGAGCTATACGAGAGGGGATGAAATGCTCGTGGTGGTGCGGGGTAC
GATTTATCCAGCAGAGTGGCAACGTGATTTTCAGTACCAGCATGCAAAGC
CCTCCGAGACAGCGCCTTTCAAATTTCCGGGTAACGTGCACGCGGGTTTC
TTTGCTGTTTTCAAAGATTTGGCAGAGCTGTTGATCGATGAGGAGATTAA
GACACGCGCGCCTAAGAAGGTGACGTTTACAGGGCATTCCCTGGGGGGGT
CGGTGGCGGCATTGCTAGCGTTCTACGCAAGTATGTTCGTCGCGACCACG
GAGTTAATTTCGTTCGGAGCCCCCAATGTGGGCGATGCAACGTTTTCTGA
GGCTTTCAATGTCAGGGTGAACAATCGGCATTTGGCCTTTTCAGGGGTGG
GCAGTCGCGAGGGTTCTTACTTGATTGGTGATTGGATCGCCCAGGTACCT
TGTGGGGCGGTCACGACCTGCCCGCTGCTGACGGAGATGAGCTCAATAAA
TCTTGGTCAGCAACAGCAGCAGCAGCAGCAAGAGGTTCAGGTGCAGCAGG
AAGAAGTGTCGTATGACTATACAGCTCTGGGCGGGGCAGTCCCATTTACG
CCTGCGGATATGTTAAACAATTTGACATGGGCGACCCGCTCCGACGTGAC
GAGCTTTCGGTATTCACCCGTGGCGTCTCATGTGTGTAGTTATTTGTGTT
TTACTGCTCCATCGGTGGGGGATGATTATAATCAATGTGTGTTTACGCTG
GAGATGAGTGACGTGGATATGAATAAGCGATGTGTGATAAACTTGTAA
back to top
Synonyms
Publications