NO07G02040.1, NO07G02040.1 (mRNA) Nannochloropsis oceanica

Overview
NameNO07G02040.1
Unique NameNO07G02040.1
TypemRNA
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length4132
Alignment locationchr7:596847..601772 +

Link to JBrowse

Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr7genomechr7:596847..601772 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. oceanica IMET12017-10-24
Homology annotation for N. oceanica IMET12017-10-25
InterPro analysis for N. oceanica IMET12017-10-25
Annotated Terms
Homology
[Close]
BLAST of NO07G02040.1 vs.
Match: EWM27215.1 (dna polymerase eta [Nannochloropsis gaditana])

HSP 1 Score: 725.7 bits (1872), Expect = 1.700e-205
Identity = 482/883 (54.59%), Postives = 579/883 (65.57%), Query Frame = 0 
Query:    1 MHRGSDEWEEEEEEDDDIRDEANLGFLAHAHGSLLTSSLSGRGWQESASSSSGAGGKVIAHLDMDAFYCQVESGIDPSLKGKPMAVVQYAPSGNLTTQTVYQNRRVDRSNQSLIAVSYEARARGVRRIMLGDQARAVCPEIILVQVCVAHKKADLAIYREAGAKVIKILARYGPTERASIDEAYVDLTAAAQARLKEFGPEMIDRARKQSKLAGLEGQEQHVLSREDVRNGVLIGGGGDRNGEEDKKGQKAKPFSPHAVTENHDNVG-PVRDDGGTKSASRATATANTITITEIENGARQPSSPIINSNNESGSIANVTNSPDQQQQQQQQQQQQQQQQQQQQQQPPESFSASSSPTPLSTTRAAAAWWARPLHVWTRSEKEMVCGATILLEMRAAVTAELGYTCSGGLAPSKLLAKLGSAMHKPNQQTLIVQEIVPVLLAPMPVARLKGLGGDFGKKVMEDLGCSTIGEVVQTPLASLRALYGDADADWLFKLVRGVDGDTVEDRRLAKSVSCGKTFYGHNNLRSMEQVHTWLRQLAGELAERLRKDADLHARIPQLLTVSFQAMGLGGQQQNVSRSAPLRLSIEQLLVEVEVGAGSSDAVGAATATGGA---VQESLAEQGLSLVRRWHNQQVDETPHLSAANNALCLTTLYLTAGNFLEIKQKSRMTSFFTKADPALVAVSMSVAGAGAGACCTAPNASSPSKPQRLPDGAASQSSSSSTSATSFFTQRTLPVSQQQHFNNTQDVDGPTLKRKEIGNSEGRGGKGEEKGGGGENGGRGVAAALGTSGLDPAHVDSAVLAELPVEIRNEIMAGMAAAAATGKKVRSSTSSAAPSSTVRKIENYFQRGSIAATAQLPPPASSVCSASPARKRTLDRFFKTKK 880
            M++ +D+ E EEE DD IRDEA+  FL H HG+LL+SSL+G     S S +S    KVI H+DMDAFYCQVE+G+DPSLKGKP+AVVQYAPSG+L+TQT++ +RRV +SNQSLIAVSYEARARGV+RIMLGDQARAVCP+I LVQVCVAHKKADL IYREAGAKVIKILARYGPTERASIDEAYVDLTA                   QS+L    G +  V +R + +   L             +GQK +         N   +G  VR DG TK   R ++ +  ++ T  E G  + ++  I         A +       Q        Q         +P ++ +++S+    STTRAAAAWW RPL  WTRSEKEMVCGA IL EMRAAVTAELGYTCSGGLAPSKLLAKLGSAMHKPNQQTLIVQE++P+LLAP+PVARLKGLGGDFGKKVMEDLGCSTIGEVV+ PL+ L ALYG++DA WLFKLVRGVD D+VEDRRLAKSVSCGKTF+G+NNLR MEQ+H WLRQLAGEL +RLR+DA+LHARIPQLLTVSFQ+MG+GG  QN SRSAPLRLSIEQLL    V A  +   G  +A  G    VQESLA+QGLSLVRRWH     ET HLS + + LCL+TLYLTA NFLEIKQKSRMTSFF K               GA +  +A ++ S SK    P+ + S S SSS  A +       P +  + F        P  K+   G+      +  ++   GE   +  +  +G  GLDP  +D AVL ELP  IR EI  G+AAA A+GK+ + S+ SA      +KI+ YF +G        P PA    S+   ++ TLDRF KT K
Sbjct:    1 MNQENDDGEAEEEHDD-IRDEADRSFLTHVHGTLLSSSLAGGADCTSTSPAS----KVIVHIDMDAFYCQVEAGLDPSLKGKPIAVVQYAPSGDLSTQTIHHDRRVSQSNQSLIAVSYEARARGVKRIMLGDQARAVCPDITLVQVCVAHKKADLTIYREAGAKVIKILARYGPTERASIDEAYVDLTAM-----------------AQSRLRDF-GPDMIVRARRESKVAGL-------------EGQKEQATLTREDVRNGVLIGGQVRQDGSTKEERRGSSPS--VSRTGDEGGRVENAALTI----PRAGTAWIGRDACMAQPSALDDLIQYSVALSCADEPGQARASTSA----STTRAAAAWWERPLQAWTRSEKEMVCGAAILSEMRAAVTAELGYTCSGGLAPSKLLAKLGSAMHKPNQQTLIVQEMIPILLAPLPVARLKGLGGDFGKKVMEDLGCSTIGEVVERPLSRLEALYGESDAAWLFKLVRGVDDDSVEDRRLAKSVSCGKTFFGNNNLREMEQIHRWLRQLAGELTQRLRRDAELHARIPQLLTVSFQSMGVGGHHQNASRSAPLRLSIEQLL---SVDAEETVEKGTPSAQMGGRNDVQESLADQGLSLVRRWHK----ETAHLSKSQHTLCLSTLYLTASNFLEIKQKSRMTSFFPK--------------FGANSTHSAVDSGSNSKATAPPEYSFSDSKSSSPCAGAGDLSTDPPPAPCESFFKASR-STPIAKQ---GSPVEEIAETRKRQLDGETAAKRESTNMG--GLDPTVIDPAVLEELPPHIRREITDGIAAATASGKRNKFSSRSA---PNEKKIDTYFPKG--GPHTGWPTPARPPPSSLSVKRGTLDRFLKTTK 805
The following BLAST results are available for this feature:
BLAST of NO07G02040.1 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 1
Match NameE-valueIdentityDescription
EWM27215.11.700e-20554.59dna polymerase eta [Nannochloropsis gaditana][more]
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
NO07G02040NO07G02040Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
NO07G02040.1NO07G02040.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
NO07G02040.1.cds1NO07G02040.1.cds1Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO07G02040.1.cds2NO07G02040.1.cds2Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO07G02040.1.cds3NO07G02040.1.cds3Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO07G02040.1.cds4NO07G02040.1.cds4Nannochloropsis oceanica (N. oceanica IMET1)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>NO07G02040.1 ID=NO07G02040.1|Name=NO07G02040.1|organism=Nannochloropsis oceanica|type=mRNA|length=4132bp
CATAAAAAAATCAGAAACCGAGAAGTACCACAGGCCGACCTCCTGCCCAT
CTCCACGCATTCCGTCAAGGATAAACCCGTAAGAGTTTGGTCTGTAGCGC
GTTAACCGTATCGACCGTGTCTAGATATAGGCACGGCATAATTTTTTCCA
TGACGACGCATGAGGGTAATGTACATACCCCTGACCATTTGAGGCTCGTC
TTTCCCGTGCCGTGCTTGCTTCATTACTTTACTACAACACTGCAGGAGTA
ATGCATCGGGGCAGTGACGAATGGGAGGAAGAGGAGGAGGAAGACGATGA
TATCCGCGACGAGGCAAACCTTGGTTTCTTGGCGCATGCACATGGTAGCT
TATTGACCTCATCCTTGTCAGGTAGAGGCTGGCAAGAATCAGCGTCGTCA
TCCTCCGGAGCCGGAGGGAAAGTCATTGCACATTTAGATATGGACGCGTT
CTACTGCCAGGTCGAATCAGGAATAGACCCCAGCCTTAAAGGAAAGCCCA
TGGCCGTAGTTCAATATGCACCCTCCGGCAACCTGACAACGCAAACGGTC
TACCAAAATCGACGCGTGGACCGAAGCAACCAGTCTCTCATCGCCGTCTC
CTACGAAGCCCGCGCCCGAGGGGTCAGACGCATCATGCTTGGGGACCAAG
CCAGGGCAGTGTGCCCCGAAATTATCCTGGTCCAAGTCTGCGTTGCCCAC
AAGAAAGCTGACCTTGCTATCTATCGCGAAGCAGGGGCAAAAGTAATCAA
GATACTCGCTCGGTACGGTCCTACGGAGCGTGCATCCATTGACGAGGCTT
ACGTTGATTTGACCGCAGCGGCACAAGCACGATTGAAGGAGTTTGGGCCC
GAAATGATTGATCGTGCCCGGAAACAGAGTAAGCTTGCTGGTTTAGAGGG
TCAAGAACAACATGTGTTATCGAGGGAAGATGTGCGGAATGGGGTCCTTA
TAGGAGGGGGGGGAGATAGAAATGGGGAGGAAGACAAAAAAGGCCAGAAG
GCAAAGCCTTTTTCACCACATGCAGTTACAGAAAATCACGATAATGTGGG
GCCTGTTAGAGATGATGGCGGCACAAAATCTGCTTCTCGTGCTACTGCCA
CGGCCAATACCATCACCATCACCGAAATTGAGAACGGTGCCCGGCAGCCT
TCCTCTCCCATCATAAACAGCAACAATGAATCCGGCTCCATTGCCAACGT
CACCAACAGCCCCGATCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGC
AGCAGCAGCAACAGCAGCAGCAGCAGCAGCAGCCCCCGGAGTCCTTTTCC
GCTTCTTCTTCGCCTACTCCGCTTAGCACCACCCGTGCAGCCGCCGCCTG
GTGGGCCCGCCCCTTGCATGTTTGGACAAGGAGCGAGAAAGAAATGGTGT
GTGGCGCTACAATCCTCCTCGAAATGCGGGCAGCCGTGACGGCTGAGCTG
GGCTATACGTGCTCTGGAGGGCTTGCTCCTTCCAAGCTGCTAGCGAAGCT
GGGGTCGGCGATGCACAAACCAAACCAACAGACGTTGATCGTGCAGGAGA
TTGTACCTGTTTTGTTGGCTCCTATGCCGGTGGCGCGGCTGAAGGGTTTG
GGGGGTGATTTTGGGAAGAAAGTAATGGAAGATTTGGGGTGTAGCACGAT
TGGGGAGGTGGTTCAGACGCCTCTGGCAAGTTTGCGAGCTCTGTATGGAG
ATGCGGATGCCGACTGGCTGTTCAAGCTGGTTAGAGGCGTGGACGGCGAT
ACGGTGGAAGATCGGCGGTTGGCCAAGTCGGTGTCATGCGGCAAGACTTT
TTATGGTCACAACAATCTGAGGTCGATGGAGCAAGTCCACACCTGGCTGC
GGCAGCTAGCCGGAGAGCTGGCGGAACGGCTTCGGAAAGACGCGGATTTG
CATGCGCGCATTCCCCAGTTGCTGACGGTATCCTTCCAAGCGATGGGCTT
GGGAGGGCAGCAGCAGAATGTCTCGCGCTCCGCACCTCTGCGGTTGTCGA
TAGAGCAGCTTCTGGTAGAGGTGGAAGTTGGGGCAGGGAGTAGTGATGCT
GTCGGTGCTGCAACTGCGACGGGTGGGGCCGTACAAGAGTCGTTGGCAGA
GCAAGGCCTGAGCTTGGTGAGGAGGTGGCACAATCAGCAAGTGGACGAAA
CCCCGCATCTATCGGCTGCTAATAATGCTCTCTGCTTGACCACGCTGTAC
CTCACGGCGGGCAATTTCTTAGAGATCAAGCAGAAGAGCCGCATGACTTC
CTTCTTCACCAAGGCCGATCCTGCTTTGGTTGCAGTCTCGATGTCGGTTG
CTGGTGCTGGTGCTGGTGCTTGTTGTACTGCTCCGAATGCTTCCTCCCCC
TCCAAGCCTCAGCGATTACCAGATGGCGCCGCTTCTCAATCCTCCTCGTC
CTCTACCTCGGCCACGTCTTTCTTCACCCAACGAACGCTGCCTGTCAGCC
AACAACAGCACTTCAACAACACGCAGGATGTCGACGGCCCCACACTCAAG
CGCAAAGAAATTGGAAACTCTGAAGGTAGAGGTGGGAAAGGAGAAGAAAA
AGGAGGAGGAGGAGAGAATGGAGGAAGGGGAGTTGCAGCAGCGCTTGGTA
CGAGTGGTCTAGACCCGGCACATGTCGACTCTGCTGTGCTGGCTGAGCTG
CCGGTTGAGATTCGGAATGAGATTATGGCAGGCATGGCTGCAGCGGCTGC
CACGGGCAAGAAAGTTCGGAGCAGCACATCCTCCGCCGCGCCAAGCAGCA
CAGTAAGGAAAATCGAAAATTATTTTCAGAGAGGAAGCATTGCTGCTACC
GCACAATTACCTCCACCAGCCTCCTCCGTATGTTCTGCATCTCCAGCGAG
GAAACGGACGCTGGACAGATTTTTCAAGACCAAAAAGGCATAGAAAATTT
TGTTTTTAACAAAACATGTGAACGAAAAAAGTAAATAGAAAATGTACCTC
ACAATTTTCTCCTTGTTTCCGAAAATCTTCCTTTTCTCGATCCAATTCCT
TTCACTTTGAAGAGGACCCAAACGATGATGAGGAAGACATGAAGAACCCC
CCAGGCCGCTTCAATTGAGAGCGGAACTCCGACCAGCAGTCCCCCATACC
CGTTCCCATTTGTCGGTACGCCGCGGCGGGTGATGAGGCTTGCTTCCAAC
CTTCCCCCACGGCGGCCAGCGATTTGGAAATTGCAGGATTCAGCTCCTCA
AGTACGTGCTCGCACAGGACCTCATCTCCCTCGTTGAAAAAAGGAGAAAG
AGCTGCCTCACCATCACAGATCCGTACATCCAAGCCATGCAAATGCGGAG
AGGAAAGCAAAATCTGTCCCTCTGCCGCACCCGTGCCTCCTATCTCCTCA
AACTTTACTCCACGATGCCACAGATCCTCCTTGGCTGCAGCCAGCCCACC
TGATTCTACCTGAAGGACCAATGCTGACATGGGCGAGTGTAGAAGGCGTA
AGGCGATGCTGTTGCGTTGGAGTGACAGGGAGGAATGCTGCTGCTGCGGT
GATTGCGCCTGCTTGAGGAAGCCCGGGGCGTCAATGATGCTGTTGGCATT
TAAGGGTGCTTTATTACCTGCACTATTGCCCTTCATTCCGTCGTGTAAAG
CATAGACATGTGGCAGGCCTGGGCATGGATGAGCACCGACTTCATCCGTG
ATGATGCTGGCCAGCTCGGCCAAATTCGCACCCGCCCCTAGCACGATTTC
TCGTACTTGCGGACTCATGGTGGAAGCCAAGGATACGCTGCTGGTCGAAG
GAACGGTACGCACTGTTGGGGTGACTATGGGTCGGTCCTCGAGTAGCCAA
GCCCGCGCGTCGTGGTATGAAGAAGACAAGGGGGCAGGGGTCATGATAGC
GGAATTTGTGAAAACATCAATACCACACAGCCGCGCCACTTGTGGGCGCT
TCAGCATGGTTGAATGTCTGGCCAAAGTCATCCAAAGAGGCAAGGGCGTA
AATTCAAGCAATGCATTACCCAATTGCAGACAAGAGTGGGGCGATGCATT
AGAGGAGGAGGCCTGAGATGTAGACAGGCGGAGAGCCAAGGCAAGCTCTT
CGCAAATTGCGTTCGCTTGAGTATTGGTGGAAGCAATGTAGCGGAGGCGT
AAAAGTGCTGTGGTGGTGGTGGTCATGGCTGT
back to top

protein sequence of NO07G02040.1

>NO07G02040.1-protein ID=NO07G02040.1-protein|Name=NO07G02040.1|organism=Nannochloropsis oceanica|type=polypeptide|length=881bp
MHRGSDEWEEEEEEDDDIRDEANLGFLAHAHGSLLTSSLSGRGWQESASS
SSGAGGKVIAHLDMDAFYCQVESGIDPSLKGKPMAVVQYAPSGNLTTQTV
YQNRRVDRSNQSLIAVSYEARARGVRRIMLGDQARAVCPEIILVQVCVAH
KKADLAIYREAGAKVIKILARYGPTERASIDEAYVDLTAAAQARLKEFGP
EMIDRARKQSKLAGLEGQEQHVLSREDVRNGVLIGGGGDRNGEEDKKGQK
AKPFSPHAVTENHDNVGPVRDDGGTKSASRATATANTITITEIENGARQP
SSPIINSNNESGSIANVTNSPDQQQQQQQQQQQQQQQQQQQQQQPPESFS
ASSSPTPLSTTRAAAAWWARPLHVWTRSEKEMVCGATILLEMRAAVTAEL
GYTCSGGLAPSKLLAKLGSAMHKPNQQTLIVQEIVPVLLAPMPVARLKGL
GGDFGKKVMEDLGCSTIGEVVQTPLASLRALYGDADADWLFKLVRGVDGD
TVEDRRLAKSVSCGKTFYGHNNLRSMEQVHTWLRQLAGELAERLRKDADL
HARIPQLLTVSFQAMGLGGQQQNVSRSAPLRLSIEQLLVEVEVGAGSSDA
VGAATATGGAVQESLAEQGLSLVRRWHNQQVDETPHLSAANNALCLTTLY
LTAGNFLEIKQKSRMTSFFTKADPALVAVSMSVAGAGAGACCTAPNASSP
SKPQRLPDGAASQSSSSSTSATSFFTQRTLPVSQQQHFNNTQDVDGPTLK
RKEIGNSEGRGGKGEEKGGGGENGGRGVAAALGTSGLDPAHVDSAVLAEL
PVEIRNEIMAGMAAAAATGKKVRSSTSSAAPSSTVRKIENYFQRGSIAAT
AQLPPPASSVCSASPARKRTLDRFFKTKKA*
back to top

mRNA from alignment at chr7:596847..601772+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>NO07G02040.1 ID=NO07G02040.1|Name=NO07G02040.1|organism=Nannochloropsis oceanica|type=mRNA|length=4926bp|location=Sequence derived from alignment at chr7:596847..601772+ (Nannochloropsis oceanica)
CATAAAAAAATCAGAAACCGAGAAGTACCACAGGCCGACCTCCTGCCCAT
CTCCACGCATTCCGTCAAGGATAAACCCGTAAGAGTTTGGTCTGTAGCGC
GTTAACCGTATCGACCGTGTCTAGATATAGGTGCGTGCAAAATAGCAACA
GGAAGACTCTTGGTGCTAGGCTCGCGAAAGCAACTTGAAGGCTTTACTGT
ACAATATTGTATATGTCAGAGGGCAAAATTCAGGCTCTCTCTCACACAAA
ACCACAAACTCACACAAAATAACAAACTTACACAAAACCACAAACACCGC
ACATGTACAGGCACGGCATAATTTTTTCCATGACGACGCATGAGGGTAAT
GTACATACCCCTGACCATTTGAGGCTCGTCTTTCCCGTGCCGTGCTTGCT
TCATTACTTTACTACAACACTGCAGGAGTAATGCATCGGGGCAGTGACGA
ATGGGAGGAAGAGGAGGAGGAAGACGATGATATCCGCGACGAGGCAAACC
TTGGTTTCTTGGCGCATGCACATGGTAGCTTATTGACCTCATCCTTGTCA
GGTAGAGGCTGGCAAGAATCAGCGTCGTCATCCTCCGGAGCCGGAGGGAA
AGTCATTGCACATTTAGGTGCGTGCGTTTGTAGGTGACAGTCTTCATCCC
CCCCTCTATTATCTAGCTGTGGGTGACTGGGTGGGCTTCGGCAATGTGCC
CCATGGCGGAAGATGCACTCGTCCTCACTCCTCGAGGCACCACAAATTTC
CTCCAACCTAACCTGATACCTTTATTTCGACACAACGCTACACAATCTAG
ATATGGACGCGTTCTACTGCCAGGTCGAATCAGGAATAGACCCCAGCCTT
AAAGGAAAGCCCATGGGTAAGTTAGTGCGTGGTATGAGGGTAGAGAGGGA
CTTCTCGGTCAAGCCGAGGGAGATAAGGAATGATTATCTGACGTGGTCTT
TCGCTTGCGAGTGGTCAGACAGGATTTGATTGTTGTTTGACAAATAAAAA
TGGTCGACCCCAAAGGAGGGTAAGGACAGAGGAGAGTGACTGGCGGATAA
GTAGGGTTGAATCAGAGATAATCTGAAGTTCATCATACTACAAAGATGAG
AACATATACATCGCACTTATCACCCTCCCGCCACCTTCTCCCCGCCATAG
CCGTAGTTCAATATGCACCCTCCGGCAACCTGACAACGCAAACGGTCTAC
CAAAATCGACGCGTGGACCGAAGCAACCAGTCTCTCATCGCCGTCTCCTA
CGAAGCCCGCGCCCGAGGGGTCAGACGCATCATGCTTGGGGACCAAGCCA
GGGCAGTGTGCCCCGAAATTATCCTGGTCCAAGTCTGCGTTGCCCACAAG
AAAGCTGACCTTGCTATCTATCGCGAAGCAGGGGCAAAAGTAATCAAGAT
ACTCGCTCGGTACGGTCCTACGGAGCGTGCATCCATTGACGAGGCTTACG
TTGATTTGACCGCAGCGGCACAAGCACGATTGAAGGAGTTTGGGCCCGAA
ATGATTGATCGTGCCCGGAAACAGAGTAAGCTTGCTGGTTTAGAGGGTCA
AGAACAACATGTGTTATCGAGGGAAGATGTGCGGAATGGGGTCCTTATAG
GAGGGGGGGGAGATAGAAATGGGGAGGAAGACAAAAAAGGCCAGAAGGCA
AAGCCTTTTTCACCACATGCAGTTACAGAAAATCACGATAATGTGGGGCC
TGTTAGAGATGATGGCGGCACAAAATCTGCTTCTCGTGCTACTGCCACGG
CCAATACCATCACCATCACCGAAATTGAGAACGGTGCCCGGCAGCCTTCC
TCTCCCATCATAAACAGCAACAATGAATCCGGCTCCATTGCCAACGTCAC
CAACAGCCCCGATCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGC
AGCAGCAACAGCAGCAGCAGCAGCAGCAGCCCCCGGAGTCCTTTTCCGCT
TCTTCTTCGCCTACTCCGCTTAGCACCACCCGTGCAGCCGCCGCCTGGTG
GGCCCGCCCCTTGCATGTTTGGACAAGGAGCGAGAAAGAAATGGTGTGTG
GCGCTACAATCCTCCTCGAAATGCGGGCAGCCGTGACGGCTGAGCTGGGC
TATACGTGCTCTGGAGGGCTTGCTCCTTCCAAGCTGCTAGCGAAGCTGGG
GTCGGCGATGCACAAACCAAACCAACAGACGTTGATCGTGCAGGAGATTG
TACCTGTTTTGTTGGCTCCTATGCCGGTGGCGCGGCTGAAGGGTTTGGGG
GGTGATTTTGGGAAGAAAGTAATGGAAGATTTGGGGTGTAGCACGATTGG
GGAGGTGGTTCAGACGCCTCTGGCAAGTTTGCGAGCTCTGTATGGAGATG
CGGATGCCGACTGGCTGTTCAAGCTGGTTAGAGGCGTGGACGGCGATACG
GTGGAAGGTAGGAGGGGAGAGAGGGAGAGGGGAGGGGAAAGGTGGGAGTG
ATTGTGGACTCATCATTCAAAAGTTGAGGTACAGAAGAGAGCGCACGCAT
CATATGACTTCATCTTTTGACTTAAAAAATAAATGATTATTGACTTCCTT
TCAGATCGGCGGTTGGCCAAGTCGGTGTCATGCGGCAAGACTTTTTATGG
TCACAACAATCTGAGGTCGATGGAGCAAGTCCACACCTGGCTGCGGCAGC
TAGCCGGAGAGCTGGCGGAACGGCTTCGGAAAGACGCGGATTTGCATGCG
CGCATTCCCCAGTTGCTGACGGTATCCTTCCAAGCGATGGGCTTGGGAGG
GCAGCAGCAGAATGTCTCGCGCTCCGCACCTCTGCGGTTGTCGATAGAGC
AGCTTCTGGTAGAGGTGGAAGTTGGGGCAGGGAGTAGTGATGCTGTCGGT
GCTGCAACTGCGACGGGTGGGGCCGTACAAGAGTCGTTGGCAGAGCAAGG
CCTGAGCTTGGTGAGGAGGTGGCACAATCAGCAAGTGGACGAAACCCCGC
ATCTATCGGCTGCTAATAATGCTCTCTGCTTGACCACGCTGTACCTCACG
GCGGGCAATTTCTTAGAGATCAAGCAGAAGAGCCGCATGACTTCCTTCTT
CACCAAGGCCGATCCTGCTTTGGTTGCAGTCTCGATGTCGGTTGCTGGTG
CTGGTGCTGGTGCTTGTTGTACTGCTCCGAATGCTTCCTCCCCCTCCAAG
CCTCAGCGATTACCAGATGGCGCCGCTTCTCAATCCTCCTCGTCCTCTAC
CTCGGCCACGTCTTTCTTCACCCAACGAACGCTGCCTGTCAGCCAACAAC
AGCACTTCAACAACACGCAGGATGTCGACGGCCCCACACTCAAGCGCAAA
GAAATTGGAAACTCTGAAGGTAGAGGTGGGAAAGGAGAAGAAAAAGGAGG
AGGAGGAGAGAATGGAGGAAGGGGAGTTGCAGCAGCGCTTGGTACGAGTG
GTCTAGACCCGGCACATGTCGACTCTGCTGTGCTGGCTGAGCTGCCGGTT
GAGATTCGGAATGAGATTATGGCAGGCATGGCTGCAGCGGCTGCCACGGG
CAAGAAAGTTCGGAGCAGCACATCCTCCGCCGCGCCAAGCAGCACAGTAA
GGAAAATCGAAAATTATTTTCAGAGAGGAAGCATTGCTGCTACCGCACAA
TTACCTCCACCAGCCTCCTCCGTATGTTCTGCATCTCCAGCGAGGAAACG
GACGCTGGACAGATTTTTCAAGACCAAAAAGGCATAGAAAATTTTGTTTT
TAACAAAACATGTGAACGAAAAAAGTAAATAGAAAATGTACCTCACAATT
TTCTCCTTGTTTCCGAAAATCTTCCTTTTCTCGATCCAATTCCTTTCACT
TTGAAGAGGACCCAAACGATGATGAGGAAGACATGAAGAACCCCCCAGGC
CGCTTCAATTGAGAGCGGAACTCCGACCAGCAGTCCCCCATACCCGTTCC
CATTTGTCGGTACGCCGCGGCGGGTGATGAGGCTTGCTTCCAACCTTCCC
CCACGGCGGCCAGCGATTTGGAAATTGCAGGATTCAGCTCCTCAAGTACG
TGCTCGCACAGGACCTCATCTCCCTCGTTGAAAAAAGGAGAAAGAGCTGC
CTCACCATCACAGATCCGTACATCCAAGCCATGCAAATGCGGAGAGGAAA
GCAAAATCTGTCCCTCTGCCGCACCCGTGCCTCCTATCTCCTCAAACTTT
ACTCCACGATGCCACAGATCCTCCTTGGCTGCAGCCAGCCCACCTGATTC
TACCTGAAGGACCAATGCTGACATGGGCGAGTGTAGAAGGCGTAAGGCGA
TGCTGTTGCGTTGGAGTGACAGGGAGGAATGCTGCTGCTGCGGTGATTGC
GCCTGCTTGAGGAAGCCCGGGGCGTCAATGATGCTGTTGGCATTTAAGGG
TGCTTTATTACCTGCACTATTGCCCTTCATTCCGTCGTGTAAAGCATAGA
CATGTGGCAGGCCTGGGCATGGATGAGCACCGACTTCATCCGTGATGATG
CTGGCCAGCTCGGCCAAATTCGCACCCGCCCCTAGCACGATTTCTCGTAC
TTGCGGACTCATGGTGGAAGCCAAGGATACGCTGCTGGTCGAAGGAACGG
TACGCACTGTTGGGGTGACTATGGGTCGGTCCTCGAGTAGCCAAGCCCGC
GCGTCGTGGTATGAAGAAGACAAGGGGGCAGGGGTCATGATAGCGGAATT
TGTGAAAACATCAATACCACACAGCCGCGCCACTTGTGGGCGCTTCAGCA
TGGTTGAATGTCTGGCCAAAGTCATCCAAAGAGGCAAGGGCGTAAATTCA
AGCAATGCATTACCCAATTGCAGACAAGAGTGGGGCGATGCATTAGAGGA
GGAGGCCTGAGATGTAGACAGGCGGAGAGCCAAGGCAAGCTCTTCGCAAA
TTGCGTTCGCTTGAGTATTGGTGGAAGCAATGTAGCGGAGGCGTAAAAGT
GCTGTGGTGGTGGTGGTCATGGCTGT
back to top

Coding sequence (CDS) from alignment at chr7:596847..601772+

>NO07G02040.1 ID=NO07G02040.1|Name=NO07G02040.1|organism=Nannochloropsis oceanica|type=CDS|length=2643bp|location=Sequence derived from alignment at chr7:596847..601772+ (Nannochloropsis oceanica)
ATGCATCGGGGCAGTGACGAATGGGAGGAAGAGGAGGAGGAAGACGATGA
TATCCGCGACGAGGCAAACCTTGGTTTCTTGGCGCATGCACATGGTAGCT
TATTGACCTCATCCTTGTCAGGTAGAGGCTGGCAAGAATCAGCGTCGTCA
TCCTCCGGAGCCGGAGGGAAAGTCATTGCACATTTAGATATGGACGCGTT
CTACTGCCAGGTCGAATCAGGAATAGACCCCAGCCTTAAAGGAAAGCCCA
TGGCCGTAGTTCAATATGCACCCTCCGGCAACCTGACAACGCAAACGGTC
TACCAAAATCGACGCGTGGACCGAAGCAACCAGTCTCTCATCGCCGTCTC
CTACGAAGCCCGCGCCCGAGGGGTCAGACGCATCATGCTTGGGGACCAAG
CCAGGGCAGTGTGCCCCGAAATTATCCTGGTCCAAGTCTGCGTTGCCCAC
AAGAAAGCTGACCTTGCTATCTATCGCGAAGCAGGGGCAAAAGTAATCAA
GATACTCGCTCGGTACGGTCCTACGGAGCGTGCATCCATTGACGAGGCTT
ACGTTGATTTGACCGCAGCGGCACAAGCACGATTGAAGGAGTTTGGGCCC
GAAATGATTGATCGTGCCCGGAAACAGAGTAAGCTTGCTGGTTTAGAGGG
TCAAGAACAACATGTGTTATCGAGGGAAGATGTGCGGAATGGGGTCCTTA
TAGGAGGGGGGGGAGATAGAAATGGGGAGGAAGACAAAAAAGGCCAGAAG
GCAAAGCCTTTTTCACCACATGCAGTTACAGAAAATCACGATAATGTGGG
GCCTGTTAGAGATGATGGCGGCACAAAATCTGCTTCTCGTGCTACTGCCA
CGGCCAATACCATCACCATCACCGAAATTGAGAACGGTGCCCGGCAGCCT
TCCTCTCCCATCATAAACAGCAACAATGAATCCGGCTCCATTGCCAACGT
CACCAACAGCCCCGATCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGC
AGCAGCAGCAACAGCAGCAGCAGCAGCAGCAGCCCCCGGAGTCCTTTTCC
GCTTCTTCTTCGCCTACTCCGCTTAGCACCACCCGTGCAGCCGCCGCCTG
GTGGGCCCGCCCCTTGCATGTTTGGACAAGGAGCGAGAAAGAAATGGTGT
GTGGCGCTACAATCCTCCTCGAAATGCGGGCAGCCGTGACGGCTGAGCTG
GGCTATACGTGCTCTGGAGGGCTTGCTCCTTCCAAGCTGCTAGCGAAGCT
GGGGTCGGCGATGCACAAACCAAACCAACAGACGTTGATCGTGCAGGAGA
TTGTACCTGTTTTGTTGGCTCCTATGCCGGTGGCGCGGCTGAAGGGTTTG
GGGGGTGATTTTGGGAAGAAAGTAATGGAAGATTTGGGGTGTAGCACGAT
TGGGGAGGTGGTTCAGACGCCTCTGGCAAGTTTGCGAGCTCTGTATGGAG
ATGCGGATGCCGACTGGCTGTTCAAGCTGGTTAGAGGCGTGGACGGCGAT
ACGGTGGAAGATCGGCGGTTGGCCAAGTCGGTGTCATGCGGCAAGACTTT
TTATGGTCACAACAATCTGAGGTCGATGGAGCAAGTCCACACCTGGCTGC
GGCAGCTAGCCGGAGAGCTGGCGGAACGGCTTCGGAAAGACGCGGATTTG
CATGCGCGCATTCCCCAGTTGCTGACGGTATCCTTCCAAGCGATGGGCTT
GGGAGGGCAGCAGCAGAATGTCTCGCGCTCCGCACCTCTGCGGTTGTCGA
TAGAGCAGCTTCTGGTAGAGGTGGAAGTTGGGGCAGGGAGTAGTGATGCT
GTCGGTGCTGCAACTGCGACGGGTGGGGCCGTACAAGAGTCGTTGGCAGA
GCAAGGCCTGAGCTTGGTGAGGAGGTGGCACAATCAGCAAGTGGACGAAA
CCCCGCATCTATCGGCTGCTAATAATGCTCTCTGCTTGACCACGCTGTAC
CTCACGGCGGGCAATTTCTTAGAGATCAAGCAGAAGAGCCGCATGACTTC
CTTCTTCACCAAGGCCGATCCTGCTTTGGTTGCAGTCTCGATGTCGGTTG
CTGGTGCTGGTGCTGGTGCTTGTTGTACTGCTCCGAATGCTTCCTCCCCC
TCCAAGCCTCAGCGATTACCAGATGGCGCCGCTTCTCAATCCTCCTCGTC
CTCTACCTCGGCCACGTCTTTCTTCACCCAACGAACGCTGCCTGTCAGCC
AACAACAGCACTTCAACAACACGCAGGATGTCGACGGCCCCACACTCAAG
CGCAAAGAAATTGGAAACTCTGAAGGTAGAGGTGGGAAAGGAGAAGAAAA
AGGAGGAGGAGGAGAGAATGGAGGAAGGGGAGTTGCAGCAGCGCTTGGTA
CGAGTGGTCTAGACCCGGCACATGTCGACTCTGCTGTGCTGGCTGAGCTG
CCGGTTGAGATTCGGAATGAGATTATGGCAGGCATGGCTGCAGCGGCTGC
CACGGGCAAGAAAGTTCGGAGCAGCACATCCTCCGCCGCGCCAAGCAGCA
CAGTAAGGAAAATCGAAAATTATTTTCAGAGAGGAAGCATTGCTGCTACC
GCACAATTACCTCCACCAGCCTCCTCCGTATGTTCTGCATCTCCAGCGAG
GAAACGGACGCTGGACAGATTTTTCAAGACCAAAAAGGCATAG
back to top
Synonyms
Publications