NO07G01430.1, NO07G01430.1 (mRNA) Nannochloropsis oceanica

Overview
NameNO07G01430.1
Unique NameNO07G01430.1
TypemRNA
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1302
Alignment locationchr7:438383..439684 +

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Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr7genomechr7:438383..439684 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. oceanica IMET12017-10-24
Homology annotation for N. oceanica IMET12017-10-25
InterPro analysis for N. oceanica IMET12017-10-25
Annotated Terms
Homology
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BLAST of NO07G01430.1 vs.
Match: EWM27256.1 (phosphatidic acid phosphatase [Nannochloropsis gaditana])

HSP 1 Score: 374.0 bits (959), Expect = 6.200e-100
Identity = 208/394 (52.79%), Postives = 262/394 (66.50%), Query Frame = 0 
Query:   40 IMSDGGVAAAGEKGGRRGRGGGGDEQEMYHLAEENGNGDTSGKEEEGGIHWAPASLRASLETYRWAEILVLVVIVTLTYMGFNHKGRKSQMFIPQVTQLLPEGTSVVLGNATAFSYPIKFQDGLLECVPTILQHCGLDAELAAVEPCCAFMETGAGPHQTISSRMLVGLCMILPLILLLLRHAVMQKCIYSSSSSSSASASASRNSSSNSCSSSTEISLFSSPSTFPSATQSLRDVLLGFFFSMALTVATTNSLKNYVSHPRPNHFALLLFASLSSSSAKAAHYAKSAWESWPSGHCSISMTAGAYISLVFLRDIKQFAGTTQRELRTILVLLALGPVFLALFIAGTRVHDYFHSAADAATGMGLGLLWALVAFFQIIPANGVEVRPNKPLKYL 434
            ++  GG     E  GR   G G     MY LAE     D  G   + G  W P +LR SLE YRW EI++L VIV L   GF    +  + +IP VTQ+LP G  VVLGNATAFSYP++F++G LEC P  L+ C    E A  +PCC FM TGA P QT+S   L+ + + LPLILL+LRH +++  + S  +SS+    +S + S+    S              SAT  LRDVL+G FFS+ALT ATTNSLK   S PRPNHFAL LFASLS  S+ A HYA+SAW++WPSGH S+SM +GA++SLV LRD++QFAG  QR+LR  LV+LALGPV+LA+F+AGTRVHDYFH+ ADA TG  LGLLWA++AF+Q++PA G+EVR N PLKYL
Sbjct:   16 VVPAGGTVGNEEMAGRENGGSG-----MYRLAE-----DVDGNGRDEGCQWVPPALRTSLERYRWLEIILLSVIVILAKEGFGSGVKNHRQYIPLVTQVLPGGAVVVLGNATAFSYPVRFREGTLECPPVTLEFCATSPESALADPCCEFMTTGAKPFQTVSHDDLIWITVGLPLILLVLRHLLLKWYLCSVPASSADPMFSSEDKSALRPLSGLPFGY--------SATFCLRDVLIGLFFSLALTRATTNSLKMLTSQPRPNHFALRLFASLSPDSSAAIHYAESAWKAWPSGHSSMSMASGAFLSLVLLRDLRQFAGPLQRQLRACLVILALGPVYLAMFVAGTRVHDYFHTTADAVTGSALGLLWAVLAFYQVVPAGGLEVRANPPLKYL 391
The following BLAST results are available for this feature:
BLAST of NO07G01430.1 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 1
Match NameE-valueIdentityDescription
EWM27256.16.200e-10052.79phosphatidic acid phosphatase [Nannochloropsis gad... [more]
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
NO07G01430NO07G01430Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
NO07G01430.1NO07G01430.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
NO07G01430.1.cds1NO07G01430.1.cds1Nannochloropsis oceanica (N. oceanica IMET1)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>NO07G01430.1 ID=NO07G01430.1|Name=NO07G01430.1|organism=Nannochloropsis oceanica|type=mRNA|length=1302bp
ATGAGCACTCAACACATATCGGCTTCTGCTCTGCCCAAATTGCACCAAGA
AACGGATTTTTCCAAGCTTGAATCCGGTGCTGGAGGCAGAATCCGCGAAA
ATGACGAATGCAACACCATCATGAGCGATGGAGGAGTAGCAGCTGCAGGA
GAGAAAGGAGGAAGGAGAGGGAGAGGAGGAGGAGGAGATGAGCAAGAAAT
GTATCACCTAGCCGAAGAAAATGGCAATGGCGACACCAGCGGGAAGGAGG
AGGAAGGGGGTATCCATTGGGCACCTGCAAGTCTACGTGCTTCGCTGGAA
ACGTATCGGTGGGCGGAAATCCTTGTTTTGGTAGTCATTGTTACCTTGAC
CTACATGGGCTTCAACCACAAGGGAAGAAAAAGTCAAATGTTCATCCCTC
AAGTCACTCAGCTCCTACCGGAGGGCACTTCGGTAGTGCTGGGAAATGCG
ACAGCCTTCTCGTACCCCATTAAGTTCCAGGACGGACTCTTAGAATGCGT
ACCAACCATACTCCAACATTGTGGGTTAGACGCAGAGCTAGCAGCAGTGG
AACCATGTTGTGCGTTCATGGAAACGGGTGCGGGACCGCATCAGACAATT
TCTTCGCGTATGCTTGTGGGGCTCTGCATGATCTTACCCTTGATTCTCCT
CCTCCTTCGGCATGCTGTGATGCAAAAATGCATCTATTCTTCCTCCTCCT
CCTCCTCTGCCTCTGCATCCGCCTCCAGAAATAGCAGCAGTAACAGTTGC
AGCAGCAGTACGGAAATCTCTCTCTTCTCTTCTCCATCCACCTTCCCCTC
CGCCACTCAATCCTTGAGGGACGTCCTCCTTGGCTTCTTCTTCAGCATGG
CCTTGACCGTTGCCACAACCAACAGCCTCAAAAACTATGTTTCCCATCCT
CGGCCCAATCACTTTGCCCTCCTCCTCTTCGCTTCCTTATCCTCTTCCTC
TGCCAAAGCAGCCCATTACGCAAAGAGCGCTTGGGAATCTTGGCCTTCAG
GGCATTGTTCGATATCAATGACAGCGGGGGCGTACATCTCACTAGTCTTC
CTTCGAGACATCAAGCAATTTGCCGGAACGACTCAAAGAGAGTTAAGAAC
GATTCTGGTCTTATTGGCCCTGGGGCCGGTGTTTCTTGCCTTGTTTATCG
CTGGCACGCGTGTTCATGATTATTTCCACAGTGCGGCTGATGCGGCGACG
GGCATGGGGTTAGGTTTGCTCTGGGCTTTAGTGGCTTTCTTTCAAATTAT
TCCTGCGAATGGCGTAGAGGTGCGCCCGAACAAGCCATTGAAATATTTGT
AG
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protein sequence of NO07G01430.1

>NO07G01430.1-protein ID=NO07G01430.1-protein|Name=NO07G01430.1|organism=Nannochloropsis oceanica|type=polypeptide|length=434bp
MSTQHISASALPKLHQETDFSKLESGAGGRIRENDECNTIMSDGGVAAAG
EKGGRRGRGGGGDEQEMYHLAEENGNGDTSGKEEEGGIHWAPASLRASLE
TYRWAEILVLVVIVTLTYMGFNHKGRKSQMFIPQVTQLLPEGTSVVLGNA
TAFSYPIKFQDGLLECVPTILQHCGLDAELAAVEPCCAFMETGAGPHQTI
SSRMLVGLCMILPLILLLLRHAVMQKCIYSSSSSSSASASASRNSSSNSC
SSSTEISLFSSPSTFPSATQSLRDVLLGFFFSMALTVATTNSLKNYVSHP
RPNHFALLLFASLSSSSAKAAHYAKSAWESWPSGHCSISMTAGAYISLVF
LRDIKQFAGTTQRELRTILVLLALGPVFLALFIAGTRVHDYFHSAADAAT
GMGLGLLWALVAFFQIIPANGVEVRPNKPLKYL*
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mRNA from alignment at chr7:438383..439684+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>NO07G01430.1 ID=NO07G01430.1|Name=NO07G01430.1|organism=Nannochloropsis oceanica|type=mRNA|length=1302bp|location=Sequence derived from alignment at chr7:438383..439684+ (Nannochloropsis oceanica)
ATGAGCACTCAACACATATCGGCTTCTGCTCTGCCCAAATTGCACCAAGA
AACGGATTTTTCCAAGCTTGAATCCGGTGCTGGAGGCAGAATCCGCGAAA
ATGACGAATGCAACACCATCATGAGCGATGGAGGAGTAGCAGCTGCAGGA
GAGAAAGGAGGAAGGAGAGGGAGAGGAGGAGGAGGAGATGAGCAAGAAAT
GTATCACCTAGCCGAAGAAAATGGCAATGGCGACACCAGCGGGAAGGAGG
AGGAAGGGGGTATCCATTGGGCACCTGCAAGTCTACGTGCTTCGCTGGAA
ACGTATCGGTGGGCGGAAATCCTTGTTTTGGTAGTCATTGTTACCTTGAC
CTACATGGGCTTCAACCACAAGGGAAGAAAAAGTCAAATGTTCATCCCTC
AAGTCACTCAGCTCCTACCGGAGGGCACTTCGGTAGTGCTGGGAAATGCG
ACAGCCTTCTCGTACCCCATTAAGTTCCAGGACGGACTCTTAGAATGCGT
ACCAACCATACTCCAACATTGTGGGTTAGACGCAGAGCTAGCAGCAGTGG
AACCATGTTGTGCGTTCATGGAAACGGGTGCGGGACCGCATCAGACAATT
TCTTCGCGTATGCTTGTGGGGCTCTGCATGATCTTACCCTTGATTCTCCT
CCTCCTTCGGCATGCTGTGATGCAAAAATGCATCTATTCTTCCTCCTCCT
CCTCCTCTGCCTCTGCATCCGCCTCCAGAAATAGCAGCAGTAACAGTTGC
AGCAGCAGTACGGAAATCTCTCTCTTCTCTTCTCCATCCACCTTCCCCTC
CGCCACTCAATCCTTGAGGGACGTCCTCCTTGGCTTCTTCTTCAGCATGG
CCTTGACCGTTGCCACAACCAACAGCCTCAAAAACTATGTTTCCCATCCT
CGGCCCAATCACTTTGCCCTCCTCCTCTTCGCTTCCTTATCCTCTTCCTC
TGCCAAAGCAGCCCATTACGCAAAGAGCGCTTGGGAATCTTGGCCTTCAG
GGCATTGTTCGATATCAATGACAGCGGGGGCGTACATCTCACTAGTCTTC
CTTCGAGACATCAAGCAATTTGCCGGAACGACTCAAAGAGAGTTAAGAAC
GATTCTGGTCTTATTGGCCCTGGGGCCGGTGTTTCTTGCCTTGTTTATCG
CTGGCACGCGTGTTCATGATTATTTCCACAGTGCGGCTGATGCGGCGACG
GGCATGGGGTTAGGTTTGCTCTGGGCTTTAGTGGCTTTCTTTCAAATTAT
TCCTGCGAATGGCGTAGAGGTGCGCCCGAACAAGCCATTGAAATATTTGT
AG
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Coding sequence (CDS) from alignment at chr7:438383..439684+

>NO07G01430.1 ID=NO07G01430.1|Name=NO07G01430.1|organism=Nannochloropsis oceanica|type=CDS|length=1302bp|location=Sequence derived from alignment at chr7:438383..439684+ (Nannochloropsis oceanica)
ATGAGCACTCAACACATATCGGCTTCTGCTCTGCCCAAATTGCACCAAGA
AACGGATTTTTCCAAGCTTGAATCCGGTGCTGGAGGCAGAATCCGCGAAA
ATGACGAATGCAACACCATCATGAGCGATGGAGGAGTAGCAGCTGCAGGA
GAGAAAGGAGGAAGGAGAGGGAGAGGAGGAGGAGGAGATGAGCAAGAAAT
GTATCACCTAGCCGAAGAAAATGGCAATGGCGACACCAGCGGGAAGGAGG
AGGAAGGGGGTATCCATTGGGCACCTGCAAGTCTACGTGCTTCGCTGGAA
ACGTATCGGTGGGCGGAAATCCTTGTTTTGGTAGTCATTGTTACCTTGAC
CTACATGGGCTTCAACCACAAGGGAAGAAAAAGTCAAATGTTCATCCCTC
AAGTCACTCAGCTCCTACCGGAGGGCACTTCGGTAGTGCTGGGAAATGCG
ACAGCCTTCTCGTACCCCATTAAGTTCCAGGACGGACTCTTAGAATGCGT
ACCAACCATACTCCAACATTGTGGGTTAGACGCAGAGCTAGCAGCAGTGG
AACCATGTTGTGCGTTCATGGAAACGGGTGCGGGACCGCATCAGACAATT
TCTTCGCGTATGCTTGTGGGGCTCTGCATGATCTTACCCTTGATTCTCCT
CCTCCTTCGGCATGCTGTGATGCAAAAATGCATCTATTCTTCCTCCTCCT
CCTCCTCTGCCTCTGCATCCGCCTCCAGAAATAGCAGCAGTAACAGTTGC
AGCAGCAGTACGGAAATCTCTCTCTTCTCTTCTCCATCCACCTTCCCCTC
CGCCACTCAATCCTTGAGGGACGTCCTCCTTGGCTTCTTCTTCAGCATGG
CCTTGACCGTTGCCACAACCAACAGCCTCAAAAACTATGTTTCCCATCCT
CGGCCCAATCACTTTGCCCTCCTCCTCTTCGCTTCCTTATCCTCTTCCTC
TGCCAAAGCAGCCCATTACGCAAAGAGCGCTTGGGAATCTTGGCCTTCAG
GGCATTGTTCGATATCAATGACAGCGGGGGCGTACATCTCACTAGTCTTC
CTTCGAGACATCAAGCAATTTGCCGGAACGACTCAAAGAGAGTTAAGAAC
GATTCTGGTCTTATTGGCCCTGGGGCCGGTGTTTCTTGCCTTGTTTATCG
CTGGCACGCGTGTTCATGATTATTTCCACAGTGCGGCTGATGCGGCGACG
GGCATGGGGTTAGGTTTGCTCTGGGCTTTAGTGGCTTTCTTTCAAATTAT
TCCTGCGAATGGCGTAGAGGTGCGCCCGAACAAGCCATTGAAATATTTGT
AG
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Synonyms
Publications